data_6NLC # _entry.id 6NLC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.307 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6NLC WWPDB D_1000238935 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2019-04-10 _pdbx_database_PDB_obs_spr.pdb_id 6OEA _pdbx_database_PDB_obs_spr.replace_pdb_id 6NLC _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6NLC _pdbx_database_status.recvd_initial_deposition_date 2019-01-08 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Halabelian, L.' 1 ? 'Ravichandran, M.' 2 ? 'Li, Y.' 3 ? 'Zeng, H.' 4 ? 'Bountra, C.' 5 ? 'Edwards, A.M.' 6 ? 'Arrowsmith, C.H.' 7 ? 'Structural Genomics Consortium (SGC)' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Crystal structure of HMCES SRAP domain in complex with 3' overhang DNA ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Halabelian, L.' 1 ? primary 'Li, Y.' 2 ? primary 'Ravichandran, M.' 3 ? primary 'Zeng, H.' 4 ? primary 'Bountra, C.' 5 ? primary 'Edwards, A.M.' 6 ? primary 'Arrowsmith, C.H.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 93.11 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6NLC _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.863 _cell.length_a_esd ? _cell.length_b 52.060 _cell.length_b_esd ? _cell.length_c 148.309 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein' 31802.816 1 3.4.-.- ? 'SRAP domain (UNP residues 1-270)' ? 2 polymer syn ;DNA (5'-D(*CP*CP*AP*GP*AP*CP*GP*TP*TP*G)-3') ; 3653.390 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*TP*CP*TP*GP*G)-3') ; 1840.227 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 5 non-polymer syn 'UNKNOWN ATOM OR ION' ? 7 ? ? ? ? 6 water nat water 18.015 49 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ES cell-specific 5hmC-binding protein, Putative peptidase SRAPD1, SRAP domain-containing protein 1, HMCES' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MCGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPS WFKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADS PENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKL IHPTENITFHAVSSVVNNSRNNTPECLAPVAENLYFQ ; ;MCGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPS WFKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADS PENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKL IHPTENITFHAVSSVVNNSRNNTPECLAPVAENLYFQ ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DG)(DA)(DC)(DG)(DT)(DT)(DG)(DT)(DT)' CCAGACGTTGTT B ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DT)(DG)(DG)' GTCTGG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 CYS n 1 3 GLY n 1 4 ARG n 1 5 THR n 1 6 SER n 1 7 CYS n 1 8 HIS n 1 9 LEU n 1 10 PRO n 1 11 ARG n 1 12 ASP n 1 13 VAL n 1 14 LEU n 1 15 THR n 1 16 ARG n 1 17 ALA n 1 18 CYS n 1 19 ALA n 1 20 TYR n 1 21 GLN n 1 22 ASP n 1 23 ARG n 1 24 ARG n 1 25 GLY n 1 26 GLN n 1 27 GLN n 1 28 ARG n 1 29 LEU n 1 30 PRO n 1 31 GLU n 1 32 TRP n 1 33 ARG n 1 34 ASP n 1 35 PRO n 1 36 ASP n 1 37 LYS n 1 38 TYR n 1 39 CYS n 1 40 PRO n 1 41 SER n 1 42 TYR n 1 43 ASN n 1 44 LYS n 1 45 SER n 1 46 PRO n 1 47 GLN n 1 48 SER n 1 49 ASN n 1 50 SER n 1 51 PRO n 1 52 VAL n 1 53 LEU n 1 54 LEU n 1 55 SER n 1 56 ARG n 1 57 LEU n 1 58 HIS n 1 59 PHE n 1 60 GLU n 1 61 LYS n 1 62 ASP n 1 63 ALA n 1 64 ASP n 1 65 SER n 1 66 SER n 1 67 GLU n 1 68 ARG n 1 69 ILE n 1 70 ILE n 1 71 ALA n 1 72 PRO n 1 73 MET n 1 74 ARG n 1 75 TRP n 1 76 GLY n 1 77 LEU n 1 78 VAL n 1 79 PRO n 1 80 SER n 1 81 TRP n 1 82 PHE n 1 83 LYS n 1 84 GLU n 1 85 SER n 1 86 ASP n 1 87 PRO n 1 88 SER n 1 89 LYS n 1 90 LEU n 1 91 GLN n 1 92 PHE n 1 93 ASN n 1 94 THR n 1 95 THR n 1 96 ASN n 1 97 CYS n 1 98 ARG n 1 99 SER n 1 100 ASP n 1 101 THR n 1 102 VAL n 1 103 MET n 1 104 GLU n 1 105 LYS n 1 106 ARG n 1 107 SER n 1 108 PHE n 1 109 LYS n 1 110 VAL n 1 111 PRO n 1 112 LEU n 1 113 GLY n 1 114 LYS n 1 115 GLY n 1 116 ARG n 1 117 ARG n 1 118 CYS n 1 119 VAL n 1 120 VAL n 1 121 LEU n 1 122 ALA n 1 123 ASP n 1 124 GLY n 1 125 PHE n 1 126 TYR n 1 127 GLU n 1 128 TRP n 1 129 GLN n 1 130 ARG n 1 131 CYS n 1 132 GLN n 1 133 GLY n 1 134 THR n 1 135 ASN n 1 136 GLN n 1 137 ARG n 1 138 GLN n 1 139 PRO n 1 140 TYR n 1 141 PHE n 1 142 ILE n 1 143 TYR n 1 144 PHE n 1 145 PRO n 1 146 GLN n 1 147 ILE n 1 148 LYS n 1 149 THR n 1 150 GLU n 1 151 LYS n 1 152 SER n 1 153 GLY n 1 154 SER n 1 155 ILE n 1 156 GLY n 1 157 ALA n 1 158 ALA n 1 159 ASP n 1 160 SER n 1 161 PRO n 1 162 GLU n 1 163 ASN n 1 164 TRP n 1 165 GLU n 1 166 LYS n 1 167 VAL n 1 168 TRP n 1 169 ASP n 1 170 ASN n 1 171 TRP n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 THR n 1 176 MET n 1 177 ALA n 1 178 GLY n 1 179 ILE n 1 180 PHE n 1 181 ASP n 1 182 CYS n 1 183 TRP n 1 184 GLU n 1 185 PRO n 1 186 PRO n 1 187 GLU n 1 188 GLY n 1 189 GLY n 1 190 ASP n 1 191 VAL n 1 192 LEU n 1 193 TYR n 1 194 SER n 1 195 TYR n 1 196 THR n 1 197 ILE n 1 198 ILE n 1 199 THR n 1 200 VAL n 1 201 ASP n 1 202 SER n 1 203 CYS n 1 204 LYS n 1 205 GLY n 1 206 LEU n 1 207 SER n 1 208 ASP n 1 209 ILE n 1 210 HIS n 1 211 HIS n 1 212 ARG n 1 213 MET n 1 214 PRO n 1 215 ALA n 1 216 ILE n 1 217 LEU n 1 218 ASP n 1 219 GLY n 1 220 GLU n 1 221 GLU n 1 222 ALA n 1 223 VAL n 1 224 SER n 1 225 LYS n 1 226 TRP n 1 227 LEU n 1 228 ASP n 1 229 PHE n 1 230 GLY n 1 231 GLU n 1 232 VAL n 1 233 SER n 1 234 THR n 1 235 GLN n 1 236 GLU n 1 237 ALA n 1 238 LEU n 1 239 LYS n 1 240 LEU n 1 241 ILE n 1 242 HIS n 1 243 PRO n 1 244 THR n 1 245 GLU n 1 246 ASN n 1 247 ILE n 1 248 THR n 1 249 PHE n 1 250 HIS n 1 251 ALA n 1 252 VAL n 1 253 SER n 1 254 SER n 1 255 VAL n 1 256 VAL n 1 257 ASN n 1 258 ASN n 1 259 SER n 1 260 ARG n 1 261 ASN n 1 262 ASN n 1 263 THR n 1 264 PRO n 1 265 GLU n 1 266 CYS n 1 267 LEU n 1 268 ALA n 1 269 PRO n 1 270 VAL n 1 271 ALA n 1 272 GLU n 1 273 ASN n 1 274 LEU n 1 275 TYR n 1 276 PHE n 1 277 GLN n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DG n 2 11 DT n 2 12 DT n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 277 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HMCES, C3orf37, DC12, SRAPD1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 6 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP HMCES_HUMAN Q96FZ2 ? 1 ;MCGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPS WFKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADS PENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKL IHPTENITFHAVSSVVNNSRNNTPECLAPV ; 1 2 PDB 6NLC 6NLC ? 2 ? 1 3 PDB 6NLC 6NLC ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6NLC A 1 ? 270 ? Q96FZ2 1 ? 270 ? 1 270 2 2 6NLC B 1 ? 12 ? 6NLC 1 ? 12 ? 1 12 3 3 6NLC C 1 ? 6 ? 6NLC 1 ? 6 ? 1 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6NLC ALA A 271 ? UNP Q96FZ2 ? ? 'expression tag' 271 1 1 6NLC GLU A 272 ? UNP Q96FZ2 ? ? 'expression tag' 272 2 1 6NLC ASN A 273 ? UNP Q96FZ2 ? ? 'expression tag' 273 3 1 6NLC LEU A 274 ? UNP Q96FZ2 ? ? 'expression tag' 274 4 1 6NLC TYR A 275 ? UNP Q96FZ2 ? ? 'expression tag' 275 5 1 6NLC PHE A 276 ? UNP Q96FZ2 ? ? 'expression tag' 276 6 1 6NLC GLN A 277 ? UNP Q96FZ2 ? ? 'expression tag' 277 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6NLC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.1 M potassium chloride, 0.1 M Bis-Tris, 0.05 M magnesium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-09-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(220)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.977410 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.977410 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6NLC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 49.11 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28918 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.6 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.05 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2081 _reflns_shell.percent_possible_all 99.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.045 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 3.81 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.19 _refine.aniso_B[2][2] 3.45 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -7.09 _refine.B_iso_max ? _refine.B_iso_mean 54.258 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6NLC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 38.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27471 _refine.ls_number_reflns_R_free 1445 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.76 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.22313 _refine.ls_R_factor_R_free 0.27388 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22059 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5KO9' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.167 _refine.pdbx_overall_ESU_R_Free 0.167 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 9.057 _refine.overall_SU_ML 0.209 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2051 _refine_hist.pdbx_number_atoms_nucleic_acid 324 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 2447 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 38.09 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 2488 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.018 2066 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.471 1.573 3442 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.286 1.704 4804 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.672 5.000 258 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.325 21.453 117 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.145 15.000 331 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.915 15.000 17 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.063 0.200 319 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 2575 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 546 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.964 5.744 1038 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.964 5.741 1037 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.655 8.599 1294 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.653 8.602 1295 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 4.795 6.062 1450 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.793 6.063 1451 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 7.194 9.011 2149 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 9.349 64.892 2945 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 9.351 64.875 2943 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 99 _refine_ls_shell.number_reflns_R_work 1980 _refine_ls_shell.percent_reflns_obs 99.76 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.449 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.457 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6NLC _struct.title ;Crystal structure of HMCES SRAP domain in complex with 6-nucleotide 3' overhang DNA ; _struct.pdbx_descriptor 'Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein (E.C.3.4.-.-)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6NLC _struct_keywords.text ;SRAP Domain, DNA-binding, Structural Genomics, Structural Genomics Consortium, SGC, HMCES, Protein-DNA complex, DNA damage protein, 3' overhang, DNA BINDING PROTEIN-DNA complex ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 4 ? O N N 6 ? P N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 10 ? ALA A 17 ? PRO A 10 ALA A 17 1 ? 8 HELX_P HELX_P2 AA2 ASP A 34 ? TYR A 38 ? ASP A 34 TYR A 38 5 ? 5 HELX_P HELX_P3 AA3 LEU A 57 ? PHE A 59 ? LEU A 57 PHE A 59 5 ? 3 HELX_P HELX_P4 AA4 ASP A 86 ? LEU A 90 ? ASP A 86 LEU A 90 5 ? 5 HELX_P HELX_P5 AA5 THR A 101 ? GLU A 104 ? THR A 101 GLU A 104 5 ? 4 HELX_P HELX_P6 AA6 LYS A 105 ? LYS A 114 ? LYS A 105 LYS A 114 1 ? 10 HELX_P HELX_P7 AA7 SER A 160 ? ASN A 170 ? SER A 160 ASN A 170 1 ? 11 HELX_P HELX_P8 AA8 CYS A 203 ? SER A 207 ? CYS A 203 SER A 207 5 ? 5 HELX_P HELX_P9 AA9 GLY A 219 ? ASP A 228 ? GLY A 219 ASP A 228 1 ? 10 HELX_P HELX_P10 AB1 SER A 233 ? LYS A 239 ? SER A 233 LYS A 239 1 ? 7 HELX_P HELX_P11 AB2 SER A 253 ? ASN A 258 ? SER A 253 ASN A 258 5 ? 6 HELX_P HELX_P12 AB3 THR A 263 ? ALA A 268 ? THR A 263 ALA A 268 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 3 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 3 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 5 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 5 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 7 ? AA4 ? 3 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 41 ? LYS A 44 ? SER A 41 LYS A 44 AA1 2 THR A 5 ? CYS A 7 ? THR A 5 CYS A 7 AA1 3 GLY A 124 ? ARG A 130 ? GLY A 124 ARG A 130 AA1 4 ARG A 137 ? TYR A 143 ? ARG A 137 TYR A 143 AA1 5 THR A 248 ? ALA A 251 ? THR A 248 ALA A 251 AA2 1 TYR A 20 ? GLN A 21 ? TYR A 20 GLN A 21 AA2 2 GLN A 27 ? ARG A 28 ? GLN A 27 ARG A 28 AA3 1 GLU A 31 ? TRP A 32 ? GLU A 31 TRP A 32 AA3 2 ARG A 68 ? TRP A 75 ? ARG A 68 TRP A 75 AA3 3 ASN A 49 ? SER A 55 ? ASN A 49 SER A 55 AA3 4 ARG A 117 ? ALA A 122 ? ARG A 117 ALA A 122 AA3 5 LEU A 174 ? TRP A 183 ? LEU A 174 TRP A 183 AA3 6 LEU A 192 ? ASP A 201 ? LEU A 192 ASP A 201 AA3 7 ARG A 212 ? PRO A 214 ? ARG A 212 PRO A 214 AA4 1 ARG A 212 ? PRO A 214 ? ARG A 212 PRO A 214 AA4 2 LEU A 192 ? ASP A 201 ? LEU A 192 ASP A 201 AA4 3 ASN A 96 ? ARG A 98 ? ASN A 96 ARG A 98 AA5 1 ASN A 96 ? ARG A 98 ? ASN A 96 ARG A 98 AA5 2 LEU A 192 ? ASP A 201 ? LEU A 192 ASP A 201 AA5 3 ARG A 68 ? TRP A 75 ? ARG A 68 TRP A 75 AA5 4 GLU A 31 ? TRP A 32 ? GLU A 31 TRP A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS A 44 ? O LYS A 44 N THR A 5 ? N THR A 5 AA1 2 3 N SER A 6 ? N SER A 6 O GLY A 124 ? O GLY A 124 AA1 3 4 N GLN A 129 ? N GLN A 129 O GLN A 138 ? O GLN A 138 AA1 4 5 N PHE A 141 ? N PHE A 141 O HIS A 250 ? O HIS A 250 AA2 1 2 N TYR A 20 ? N TYR A 20 O ARG A 28 ? O ARG A 28 AA3 1 2 N GLU A 31 ? N GLU A 31 O ILE A 70 ? O ILE A 70 AA3 2 3 O ILE A 69 ? O ILE A 69 N LEU A 54 ? N LEU A 54 AA3 3 4 N LEU A 53 ? N LEU A 53 O VAL A 119 ? O VAL A 119 AA3 4 5 N VAL A 120 ? N VAL A 120 O MET A 176 ? O MET A 176 AA3 5 6 N TRP A 183 ? N TRP A 183 O LEU A 192 ? O LEU A 192 AA3 6 7 N VAL A 200 ? N VAL A 200 O MET A 213 ? O MET A 213 AA4 1 2 O MET A 213 ? O MET A 213 N VAL A 200 ? N VAL A 200 AA4 2 3 O THR A 199 ? O THR A 199 N CYS A 97 ? N CYS A 97 AA5 1 2 N CYS A 97 ? N CYS A 97 O THR A 199 ? O THR A 199 AA5 2 3 O TYR A 195 ? O TYR A 195 N ARG A 74 ? N ARG A 74 AA5 3 4 O ILE A 70 ? O ILE A 70 N GLU A 31 ? N GLU A 31 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 301 ? 6 'binding site for residue EDO A 301' AC2 Software A EDO 302 ? 6 'binding site for residue EDO A 302' AC3 Software A EDO 303 ? 6 'binding site for residue EDO A 303' AC4 Software C EDO 101 ? 2 'binding site for residue EDO C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 37 ? LYS A 37 . ? 1_555 ? 2 AC1 6 ASN A 49 ? ASN A 49 . ? 1_555 ? 3 AC1 6 PRO A 72 ? PRO A 72 . ? 1_555 ? 4 AC1 6 VAL A 191 ? VAL A 191 . ? 1_555 ? 5 AC1 6 LEU A 192 ? LEU A 192 . ? 1_555 ? 6 AC1 6 TYR A 193 ? TYR A 193 . ? 1_555 ? 7 AC2 6 ARG A 16 ? ARG A 16 . ? 2_555 ? 8 AC2 6 ASP A 34 ? ASP A 34 . ? 1_555 ? 9 AC2 6 PRO A 35 ? PRO A 35 . ? 1_555 ? 10 AC2 6 ASP A 36 ? ASP A 36 . ? 1_555 ? 11 AC2 6 HOH O . ? HOH A 403 . ? 1_555 ? 12 AC2 6 HOH O . ? HOH A 436 . ? 1_555 ? 13 AC3 6 ALA A 17 ? ALA A 17 . ? 1_555 ? 14 AC3 6 LEU A 53 ? LEU A 53 . ? 1_555 ? 15 AC3 6 ARG A 68 ? ARG A 68 . ? 1_555 ? 16 AC3 6 GLU A 220 ? GLU A 220 . ? 1_555 ? 17 AC3 6 HOH O . ? HOH A 425 . ? 1_555 ? 18 AC3 6 HOH O . ? HOH A 429 . ? 1_555 ? 19 AC4 2 ASN A 93 ? ASN A 93 . ? 4_454 ? 20 AC4 2 DG C 5 ? DG C 5 . ? 1_555 ? # _atom_sites.entry_id 6NLC _atom_sites.fract_transf_matrix[1][1] 0.017901 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000972 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019209 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006753 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 TRP 32 32 32 TRP TRP A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 TRP 81 81 81 TRP TRP A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 MET 103 103 103 MET MET A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 TRP 128 128 128 TRP TRP A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 CYS 131 131 131 CYS CYS A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 THR 149 149 ? ? ? A . n A 1 150 GLU 150 150 ? ? ? A . n A 1 151 LYS 151 151 ? ? ? A . n A 1 152 SER 152 152 ? ? ? A . n A 1 153 GLY 153 153 ? ? ? A . n A 1 154 SER 154 154 ? ? ? A . n A 1 155 ILE 155 155 ? ? ? A . n A 1 156 GLY 156 156 ? ? ? A . n A 1 157 ALA 157 157 ? ? ? A . n A 1 158 ALA 158 158 ? ? ? A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 TRP 168 168 168 TRP TRP A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 TRP 171 171 171 TRP TRP A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 MET 176 176 176 MET MET A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 ASP 181 181 181 ASP ASP A . n A 1 182 CYS 182 182 182 CYS CYS A . n A 1 183 TRP 183 183 183 TRP TRP A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 TYR 195 195 195 TYR TYR A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 THR 199 199 199 THR THR A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 ASP 201 201 201 ASP ASP A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 CYS 203 203 203 CYS CYS A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 HIS 210 210 210 HIS HIS A . n A 1 211 HIS 211 211 211 HIS HIS A . n A 1 212 ARG 212 212 212 ARG ARG A . n A 1 213 MET 213 213 213 MET MET A . n A 1 214 PRO 214 214 214 PRO PRO A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 GLU 220 220 220 GLU GLU A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 TRP 226 226 226 TRP TRP A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 ASP 228 228 228 ASP ASP A . n A 1 229 PHE 229 229 229 PHE PHE A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 GLN 235 235 235 GLN GLN A . n A 1 236 GLU 236 236 236 GLU GLU A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 HIS 242 242 242 HIS HIS A . n A 1 243 PRO 243 243 243 PRO PRO A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 ASN 246 246 246 ASN ASN A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 THR 248 248 248 THR THR A . n A 1 249 PHE 249 249 249 PHE PHE A . n A 1 250 HIS 250 250 250 HIS HIS A . n A 1 251 ALA 251 251 251 ALA ALA A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 VAL 256 256 256 VAL VAL A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 ASN 258 258 258 ASN ASN A . n A 1 259 SER 259 259 259 SER SER A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 ASN 261 261 261 ASN ASN A . n A 1 262 ASN 262 262 262 ASN ASN A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 PRO 264 264 264 PRO PRO A . n A 1 265 GLU 265 265 265 GLU GLU A . n A 1 266 CYS 266 266 266 CYS CYS A . n A 1 267 LEU 267 267 267 LEU LEU A . n A 1 268 ALA 268 268 268 ALA ALA A . n A 1 269 PRO 269 269 269 PRO PRO A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 ALA 271 271 ? ? ? A . n A 1 272 GLU 272 272 ? ? ? A . n A 1 273 ASN 273 273 ? ? ? A . n A 1 274 LEU 274 274 ? ? ? A . n A 1 275 TYR 275 275 ? ? ? A . n A 1 276 PHE 276 276 ? ? ? A . n A 1 277 GLN 277 277 ? ? ? A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DA 3 3 3 DA DA B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DT 9 9 9 DT DT B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DT 11 11 ? ? ? B . n B 2 12 DT 12 12 ? ? ? B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DT 2 2 2 DT DT C . n C 3 3 DC 3 3 3 DC DC C . n C 3 4 DT 4 4 4 DT DT C . n C 3 5 DG 5 5 5 DG DG C . n C 3 6 DG 6 6 6 DG DG C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 301 301 EDO EDO A . E 4 EDO 1 302 401 EDO EDO A . F 4 EDO 1 303 501 EDO EDO A . G 5 UNX 1 304 1 UNX UNX A . H 5 UNX 1 305 2 UNX UNX A . I 5 UNX 1 306 6 UNX UNX A . J 5 UNX 1 307 8 UNX UNX A . K 5 UNX 1 308 11 UNX UNX A . L 5 UNX 1 101 5 UNX UNX B . M 5 UNX 1 102 12 UNX UNX B . N 4 EDO 1 101 101 EDO EDO C . O 6 HOH 1 401 19 HOH HOH A . O 6 HOH 2 402 55 HOH HOH A . O 6 HOH 3 403 79 HOH HOH A . O 6 HOH 4 404 66 HOH HOH A . O 6 HOH 5 405 8 HOH HOH A . O 6 HOH 6 406 41 HOH HOH A . O 6 HOH 7 407 27 HOH HOH A . O 6 HOH 8 408 76 HOH HOH A . O 6 HOH 9 409 23 HOH HOH A . O 6 HOH 10 410 14 HOH HOH A . O 6 HOH 11 411 47 HOH HOH A . O 6 HOH 12 412 36 HOH HOH A . O 6 HOH 13 413 31 HOH HOH A . O 6 HOH 14 414 2 HOH HOH A . O 6 HOH 15 415 43 HOH HOH A . O 6 HOH 16 416 37 HOH HOH A . O 6 HOH 17 417 4 HOH HOH A . O 6 HOH 18 418 46 HOH HOH A . O 6 HOH 19 419 5 HOH HOH A . O 6 HOH 20 420 53 HOH HOH A . O 6 HOH 21 421 3 HOH HOH A . O 6 HOH 22 422 44 HOH HOH A . O 6 HOH 23 423 75 HOH HOH A . O 6 HOH 24 424 6 HOH HOH A . O 6 HOH 25 425 34 HOH HOH A . O 6 HOH 26 426 1 HOH HOH A . O 6 HOH 27 427 33 HOH HOH A . O 6 HOH 28 428 7 HOH HOH A . O 6 HOH 29 429 35 HOH HOH A . O 6 HOH 30 430 69 HOH HOH A . O 6 HOH 31 431 64 HOH HOH A . O 6 HOH 32 432 78 HOH HOH A . O 6 HOH 33 433 32 HOH HOH A . O 6 HOH 34 434 54 HOH HOH A . O 6 HOH 35 435 45 HOH HOH A . O 6 HOH 36 436 42 HOH HOH A . O 6 HOH 37 437 12 HOH HOH A . O 6 HOH 38 438 50 HOH HOH A . O 6 HOH 39 439 10 HOH HOH A . O 6 HOH 40 440 17 HOH HOH A . O 6 HOH 41 441 77 HOH HOH A . O 6 HOH 42 442 25 HOH HOH A . O 6 HOH 43 443 9 HOH HOH A . O 6 HOH 44 444 24 HOH HOH A . O 6 HOH 45 445 71 HOH HOH A . O 6 HOH 46 446 72 HOH HOH A . P 6 HOH 1 201 74 HOH HOH B . P 6 HOH 2 202 15 HOH HOH B . P 6 HOH 3 203 16 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 1 2 B,C,L,M,N,P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_444 -x-1/2,y-1/2,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 -23.9083892609 0.0000000000 1.0000000000 0.0000000000 -26.0300000000 0.0000000000 0.0000000000 -1.0000000000 -74.0452864822 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-30 2 'Structure model' 1 1 2019-04-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_PDB_obs_spr 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code' 2 2 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 4 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 100.23 _pdbx_validate_rmsd_angle.angle_target_value 105.70 _pdbx_validate_rmsd_angle.angle_deviation -5.47 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 7 ? ? -153.12 80.50 2 1 GLN A 47 ? ? 86.48 -19.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 24 ? NE ? A ARG 24 NE 2 1 Y 1 A ARG 24 ? CZ ? A ARG 24 CZ 3 1 Y 1 A ARG 24 ? NH1 ? A ARG 24 NH1 4 1 Y 1 A ARG 24 ? NH2 ? A ARG 24 NH2 5 1 Y 1 A LYS 61 ? CG ? A LYS 61 CG 6 1 Y 1 A LYS 61 ? CD ? A LYS 61 CD 7 1 Y 1 A LYS 61 ? CE ? A LYS 61 CE 8 1 Y 1 A LYS 61 ? NZ ? A LYS 61 NZ 9 1 Y 1 A ARG 130 ? CD ? A ARG 130 CD 10 1 Y 1 A ARG 130 ? NE ? A ARG 130 NE 11 1 Y 1 A ARG 130 ? CZ ? A ARG 130 CZ 12 1 Y 1 A ARG 130 ? NH1 ? A ARG 130 NH1 13 1 Y 1 A ARG 130 ? NH2 ? A ARG 130 NH2 14 1 Y 1 A LYS 148 ? CG ? A LYS 148 CG 15 1 Y 1 A LYS 148 ? CD ? A LYS 148 CD 16 1 Y 1 A LYS 148 ? CE ? A LYS 148 CE 17 1 Y 1 A LYS 148 ? NZ ? A LYS 148 NZ 18 1 Y 1 A ASP 159 ? CG ? A ASP 159 CG 19 1 Y 1 A ASP 159 ? OD1 ? A ASP 159 OD1 20 1 Y 1 A ASP 159 ? OD2 ? A ASP 159 OD2 21 1 Y 1 A SER 160 ? OG ? A SER 160 OG 22 1 Y 1 A GLU 162 ? CG ? A GLU 162 CG 23 1 Y 1 A GLU 162 ? CD ? A GLU 162 CD 24 1 Y 1 A GLU 162 ? OE1 ? A GLU 162 OE1 25 1 Y 1 A GLU 162 ? OE2 ? A GLU 162 OE2 26 1 Y 1 A ASN 163 ? CG ? A ASN 163 CG 27 1 Y 1 A ASN 163 ? OD1 ? A ASN 163 OD1 28 1 Y 1 A ASN 163 ? ND2 ? A ASN 163 ND2 29 1 Y 1 A TRP 164 ? CG ? A TRP 164 CG 30 1 Y 1 A TRP 164 ? CD1 ? A TRP 164 CD1 31 1 Y 1 A TRP 164 ? CD2 ? A TRP 164 CD2 32 1 Y 1 A TRP 164 ? NE1 ? A TRP 164 NE1 33 1 Y 1 A TRP 164 ? CE2 ? A TRP 164 CE2 34 1 Y 1 A TRP 164 ? CE3 ? A TRP 164 CE3 35 1 Y 1 A TRP 164 ? CZ2 ? A TRP 164 CZ2 36 1 Y 1 A TRP 164 ? CZ3 ? A TRP 164 CZ3 37 1 Y 1 A TRP 164 ? CH2 ? A TRP 164 CH2 38 1 Y 1 A GLU 165 ? CG ? A GLU 165 CG 39 1 Y 1 A GLU 165 ? CD ? A GLU 165 CD 40 1 Y 1 A GLU 165 ? OE1 ? A GLU 165 OE1 41 1 Y 1 A GLU 165 ? OE2 ? A GLU 165 OE2 42 1 Y 1 A LYS 166 ? CG ? A LYS 166 CG 43 1 Y 1 A LYS 166 ? CD ? A LYS 166 CD 44 1 Y 1 A LYS 166 ? CE ? A LYS 166 CE 45 1 Y 1 A LYS 166 ? NZ ? A LYS 166 NZ 46 1 Y 1 A GLU 187 ? CG ? A GLU 187 CG 47 1 Y 1 A GLU 187 ? CD ? A GLU 187 CD 48 1 Y 1 A GLU 187 ? OE1 ? A GLU 187 OE1 49 1 Y 1 A GLU 187 ? OE2 ? A GLU 187 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A THR 149 ? A THR 149 3 1 Y 1 A GLU 150 ? A GLU 150 4 1 Y 1 A LYS 151 ? A LYS 151 5 1 Y 1 A SER 152 ? A SER 152 6 1 Y 1 A GLY 153 ? A GLY 153 7 1 Y 1 A SER 154 ? A SER 154 8 1 Y 1 A ILE 155 ? A ILE 155 9 1 Y 1 A GLY 156 ? A GLY 156 10 1 Y 1 A ALA 157 ? A ALA 157 11 1 Y 1 A ALA 158 ? A ALA 158 12 1 Y 1 A ALA 271 ? A ALA 271 13 1 Y 1 A GLU 272 ? A GLU 272 14 1 Y 1 A ASN 273 ? A ASN 273 15 1 Y 1 A LEU 274 ? A LEU 274 16 1 Y 1 A TYR 275 ? A TYR 275 17 1 Y 1 A PHE 276 ? A PHE 276 18 1 Y 1 A GLN 277 ? A GLN 277 19 1 Y 1 B DT 11 ? B DT 11 20 1 Y 1 B DT 12 ? B DT 12 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6NLC 'double helix' 6NLC 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 6 1_555 0.051 -0.236 0.239 -8.381 -12.841 -5.086 1 B_DC1:DG6_C B 1 ? C 6 ? 19 1 1 B DC 2 1_555 C DG 5 1_555 0.120 -0.212 0.267 -0.332 -2.933 -1.677 2 B_DC2:DG5_C B 2 ? C 5 ? 19 1 1 B DA 3 1_555 C DT 4 1_555 0.100 -0.302 -0.118 -0.333 -11.984 -1.483 3 B_DA3:DT4_C B 3 ? C 4 ? 20 1 1 B DG 4 1_555 C DC 3 1_555 -0.254 -0.292 -0.052 1.323 -15.262 3.573 4 B_DG4:DC3_C B 4 ? C 3 ? 19 1 1 B DA 5 1_555 C DT 2 1_555 0.214 -0.107 -0.111 -0.092 -8.733 1.563 5 B_DA5:DT2_C B 5 ? C 2 ? 20 1 1 B DC 6 1_555 C DG 1 1_555 0.430 -0.240 -0.340 17.176 -4.779 0.389 6 B_DC6:DG1_C B 6 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 6 1_555 B DC 2 1_555 C DG 5 1_555 -0.125 -0.372 3.136 0.861 5.522 32.837 -1.523 0.355 3.031 9.681 -1.509 33.296 1 BB_DC1DC2:DG5DG6_CC B 1 ? C 6 ? B 2 ? C 5 ? 1 B DC 2 1_555 C DG 5 1_555 B DA 3 1_555 C DT 4 1_555 -0.389 0.068 3.310 2.537 0.700 37.938 0.014 0.923 3.278 1.076 -3.897 38.026 2 BB_DC2DA3:DT4DG5_CC B 2 ? C 5 ? B 3 ? C 4 ? 1 B DA 3 1_555 C DT 4 1_555 B DG 4 1_555 C DC 3 1_555 0.772 0.134 3.294 -0.475 1.728 33.516 -0.053 -1.415 3.285 2.994 0.823 33.562 3 BB_DA3DG4:DC3DT4_CC B 3 ? C 4 ? B 4 ? C 3 ? 1 B DG 4 1_555 C DC 3 1_555 B DA 5 1_555 C DT 2 1_555 -0.099 0.163 3.301 -0.087 -3.966 40.178 0.686 0.134 3.271 -5.756 0.126 40.366 4 BB_DG4DA5:DT2DC3_CC B 4 ? C 3 ? B 5 ? C 2 ? 1 B DA 5 1_555 C DT 2 1_555 B DC 6 1_555 C DG 1 1_555 0.513 -0.357 2.910 1.469 0.477 29.253 -0.798 -0.730 2.925 0.943 -2.906 29.293 5 BB_DA5DC6:DG1DT2_CC B 5 ? C 2 ? B 6 ? C 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 'UNKNOWN ATOM OR ION' UNX 6 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #