data_6NM8 # _entry.id 6NM8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6NM8 pdb_00006nm8 10.2210/pdb6nm8/pdb WWPDB D_1000238893 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6NM8 _pdbx_database_status.recvd_initial_deposition_date 2019-01-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Perry, E.' 1 ? 'Zhao, B.' 2 ? 'Fesik, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Bioorg. Med. Chem. Lett.' _citation.journal_id_ASTM BMCLE8 _citation.journal_id_CSD 1127 _citation.journal_id_ISSN 1464-3405 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 786 _citation.page_last 790 _citation.title 'Fragment-based screening of programmed death ligand 1 (PD-L1).' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2019.01.028 _citation.pdbx_database_id_PubMed 30728114 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Perry, E.' 1 ? primary 'Mills, J.J.' 2 ? primary 'Zhao, B.' 3 ? primary 'Wang, F.' 4 ? primary 'Sun, Q.' 5 ? primary 'Christov, P.P.' 6 ? primary 'Tarr, J.C.' 7 ? primary 'Rietz, T.A.' 8 ? primary 'Olejniczak, E.T.' 9 ? primary 'Lee, T.' 10 ? primary 'Fesik, S.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6NM8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.455 _cell.length_a_esd ? _cell.length_b 54.604 _cell.length_b_esd ? _cell.length_c 141.272 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NM8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Programmed cell death 1 ligand 1' 14811.928 2 ? V76T ? ? 2 non-polymer syn "N-({2,6-dimethoxy-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)-D-alanine" 435.512 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Programmed death ligand 1,B7 homolog 1,B7-H1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKTQHSSYRQRARLLKDQLSLGN AALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYAAALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKTQHSSYRQRARLLKDQLSLGN AALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYAAALEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 PHE n 1 4 THR n 1 5 VAL n 1 6 THR n 1 7 VAL n 1 8 PRO n 1 9 LYS n 1 10 ASP n 1 11 LEU n 1 12 TYR n 1 13 VAL n 1 14 VAL n 1 15 GLU n 1 16 TYR n 1 17 GLY n 1 18 SER n 1 19 ASN n 1 20 MET n 1 21 THR n 1 22 ILE n 1 23 GLU n 1 24 CYS n 1 25 LYS n 1 26 PHE n 1 27 PRO n 1 28 VAL n 1 29 GLU n 1 30 LYS n 1 31 GLN n 1 32 LEU n 1 33 ASP n 1 34 LEU n 1 35 ALA n 1 36 ALA n 1 37 LEU n 1 38 ILE n 1 39 VAL n 1 40 TYR n 1 41 TRP n 1 42 GLU n 1 43 MET n 1 44 GLU n 1 45 ASP n 1 46 LYS n 1 47 ASN n 1 48 ILE n 1 49 ILE n 1 50 GLN n 1 51 PHE n 1 52 VAL n 1 53 HIS n 1 54 GLY n 1 55 GLU n 1 56 GLU n 1 57 ASP n 1 58 LEU n 1 59 LYS n 1 60 THR n 1 61 GLN n 1 62 HIS n 1 63 SER n 1 64 SER n 1 65 TYR n 1 66 ARG n 1 67 GLN n 1 68 ARG n 1 69 ALA n 1 70 ARG n 1 71 LEU n 1 72 LEU n 1 73 LYS n 1 74 ASP n 1 75 GLN n 1 76 LEU n 1 77 SER n 1 78 LEU n 1 79 GLY n 1 80 ASN n 1 81 ALA n 1 82 ALA n 1 83 LEU n 1 84 GLN n 1 85 ILE n 1 86 THR n 1 87 ASP n 1 88 VAL n 1 89 LYS n 1 90 LEU n 1 91 GLN n 1 92 ASP n 1 93 ALA n 1 94 GLY n 1 95 VAL n 1 96 TYR n 1 97 ARG n 1 98 CYS n 1 99 MET n 1 100 ILE n 1 101 SER n 1 102 TYR n 1 103 GLY n 1 104 GLY n 1 105 ALA n 1 106 ASP n 1 107 TYR n 1 108 LYS n 1 109 ARG n 1 110 ILE n 1 111 THR n 1 112 VAL n 1 113 LYS n 1 114 VAL n 1 115 ASN n 1 116 ALA n 1 117 PRO n 1 118 TYR n 1 119 ALA n 1 120 ALA n 1 121 ALA n 1 122 LEU n 1 123 GLU n 1 124 HIS n 1 125 HIS n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 129 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CD274, B7H1, PDCD1L1, PDCD1LG1, PDL1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PD1L1_HUMAN _struct_ref.pdbx_db_accession Q9NZQ7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAA LQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPY ; _struct_ref.pdbx_align_begin 19 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6NM8 A 3 ? 118 ? Q9NZQ7 19 ? 134 ? 19 134 2 1 6NM8 B 3 ? 118 ? Q9NZQ7 19 ? 134 ? 19 134 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6NM8 MET A 1 ? UNP Q9NZQ7 ? ? 'initiating methionine' 17 1 1 6NM8 ALA A 2 ? UNP Q9NZQ7 ? ? 'expression tag' 18 2 1 6NM8 THR A 60 ? UNP Q9NZQ7 VAL 76 'engineered mutation' 76 3 1 6NM8 ALA A 119 ? UNP Q9NZQ7 ? ? 'expression tag' 135 4 1 6NM8 ALA A 120 ? UNP Q9NZQ7 ? ? 'expression tag' 136 5 1 6NM8 ALA A 121 ? UNP Q9NZQ7 ? ? 'expression tag' 137 6 1 6NM8 LEU A 122 ? UNP Q9NZQ7 ? ? 'expression tag' 138 7 1 6NM8 GLU A 123 ? UNP Q9NZQ7 ? ? 'expression tag' 139 8 1 6NM8 HIS A 124 ? UNP Q9NZQ7 ? ? 'expression tag' 140 9 1 6NM8 HIS A 125 ? UNP Q9NZQ7 ? ? 'expression tag' 141 10 1 6NM8 HIS A 126 ? UNP Q9NZQ7 ? ? 'expression tag' 142 11 1 6NM8 HIS A 127 ? UNP Q9NZQ7 ? ? 'expression tag' 143 12 1 6NM8 HIS A 128 ? UNP Q9NZQ7 ? ? 'expression tag' 144 13 1 6NM8 HIS A 129 ? UNP Q9NZQ7 ? ? 'expression tag' 145 14 2 6NM8 MET B 1 ? UNP Q9NZQ7 ? ? 'initiating methionine' 17 15 2 6NM8 ALA B 2 ? UNP Q9NZQ7 ? ? 'expression tag' 18 16 2 6NM8 THR B 60 ? UNP Q9NZQ7 VAL 76 'engineered mutation' 76 17 2 6NM8 ALA B 119 ? UNP Q9NZQ7 ? ? 'expression tag' 135 18 2 6NM8 ALA B 120 ? UNP Q9NZQ7 ? ? 'expression tag' 136 19 2 6NM8 ALA B 121 ? UNP Q9NZQ7 ? ? 'expression tag' 137 20 2 6NM8 LEU B 122 ? UNP Q9NZQ7 ? ? 'expression tag' 138 21 2 6NM8 GLU B 123 ? UNP Q9NZQ7 ? ? 'expression tag' 139 22 2 6NM8 HIS B 124 ? UNP Q9NZQ7 ? ? 'expression tag' 140 23 2 6NM8 HIS B 125 ? UNP Q9NZQ7 ? ? 'expression tag' 141 24 2 6NM8 HIS B 126 ? UNP Q9NZQ7 ? ? 'expression tag' 142 25 2 6NM8 HIS B 127 ? UNP Q9NZQ7 ? ? 'expression tag' 143 26 2 6NM8 HIS B 128 ? UNP Q9NZQ7 ? ? 'expression tag' 144 27 2 6NM8 HIS B 129 ? UNP Q9NZQ7 ? ? 'expression tag' 145 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KSD non-polymer . "N-({2,6-dimethoxy-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)-D-alanine" ? 'C26 H29 N O5' 435.512 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6NM8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '29% PEG 4000, 0.28 M NaCl, 0.01 M Tris' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-08-13 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0003 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0003 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6NM8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.792 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6839 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.700 _reflns.pdbx_Rmerge_I_obs 0.120 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.962 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.126 _reflns.pdbx_Rpim_I_all 0.036 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.800 2.850 ? ? ? ? ? ? 322 100.000 ? ? ? ? 0.592 ? ? ? ? ? ? ? ? 12.600 ? 0.919 ? ? 0.617 0.172 ? 1 1 0.945 ? 2.850 2.900 ? ? ? ? ? ? 324 99.400 ? ? ? ? 0.657 ? ? ? ? ? ? ? ? 12.200 ? 0.879 ? ? 0.686 0.194 ? 2 1 0.933 ? 2.900 2.960 ? ? ? ? ? ? 318 100.000 ? ? ? ? 0.685 ? ? ? ? ? ? ? ? 12.100 ? 1.459 ? ? 0.715 0.205 ? 3 1 0.952 ? 2.960 3.020 ? ? ? ? ? ? 351 100.000 ? ? ? ? 0.487 ? ? ? ? ? ? ? ? 11.700 ? 0.920 ? ? 0.509 0.147 ? 4 1 0.951 ? 3.020 3.080 ? ? ? ? ? ? 343 98.800 ? ? ? ? 0.439 ? ? ? ? ? ? ? ? 10.900 ? 1.024 ? ? 0.461 0.137 ? 5 1 0.951 ? 3.080 3.150 ? ? ? ? ? ? 310 100.000 ? ? ? ? 0.339 ? ? ? ? ? ? ? ? 11.300 ? 0.919 ? ? 0.355 0.104 ? 6 1 0.986 ? 3.150 3.230 ? ? ? ? ? ? 348 99.700 ? ? ? ? 0.328 ? ? ? ? ? ? ? ? 11.900 ? 0.971 ? ? 0.342 0.097 ? 7 1 0.984 ? 3.230 3.320 ? ? ? ? ? ? 340 100.000 ? ? ? ? 0.263 ? ? ? ? ? ? ? ? 13.000 ? 0.962 ? ? 0.274 0.075 ? 8 1 0.988 ? 3.320 3.420 ? ? ? ? ? ? 335 100.000 ? ? ? ? 0.225 ? ? ? ? ? ? ? ? 12.800 ? 1.047 ? ? 0.234 0.065 ? 9 1 0.987 ? 3.420 3.530 ? ? ? ? ? ? 334 100.000 ? ? ? ? 0.173 ? ? ? ? ? ? ? ? 12.600 ? 0.985 ? ? 0.180 0.050 ? 10 1 0.990 ? 3.530 3.650 ? ? ? ? ? ? 348 100.000 ? ? ? ? 0.155 ? ? ? ? ? ? ? ? 12.400 ? 1.009 ? ? 0.162 0.045 ? 11 1 0.993 ? 3.650 3.800 ? ? ? ? ? ? 342 100.000 ? ? ? ? 0.122 ? ? ? ? ? ? ? ? 12.000 ? 0.967 ? ? 0.128 0.037 ? 12 1 0.994 ? 3.800 3.970 ? ? ? ? ? ? 333 100.000 ? ? ? ? 0.113 ? ? ? ? ? ? ? ? 11.400 ? 1.071 ? ? 0.118 0.035 ? 13 1 0.992 ? 3.970 4.180 ? ? ? ? ? ? 353 100.000 ? ? ? ? 0.084 ? ? ? ? ? ? ? ? 10.100 ? 0.898 ? ? 0.088 0.027 ? 14 1 0.997 ? 4.180 4.440 ? ? ? ? ? ? 335 100.000 ? ? ? ? 0.079 ? ? ? ? ? ? ? ? 11.900 ? 0.976 ? ? 0.082 0.024 ? 15 1 0.996 ? 4.440 4.790 ? ? ? ? ? ? 364 99.700 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 12.500 ? 0.910 ? ? 0.067 0.019 ? 16 1 0.997 ? 4.790 5.270 ? ? ? ? ? ? 338 99.700 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 11.700 ? 0.901 ? ? 0.078 0.023 ? 17 1 0.995 ? 5.270 6.030 ? ? ? ? ? ? 360 100.000 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 11.400 ? 0.731 ? ? 0.071 0.021 ? 18 1 0.998 ? 6.030 7.590 ? ? ? ? ? ? 369 100.000 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 9.600 ? 0.799 ? ? 0.082 0.025 ? 19 1 0.997 ? 7.590 50.000 ? ? ? ? ? ? 372 90.300 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 9.900 ? 0.873 ? ? 0.074 0.021 ? 20 1 0.998 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 98.900 _refine.B_iso_mean 38.9110 _refine.B_iso_min 7.940 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6NM8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.7920 _refine.ls_d_res_low 20.2630 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6786 _refine.ls_number_reflns_R_free 345 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.8600 _refine.ls_percent_reflns_R_free 5.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1999 _refine.ls_R_factor_R_free 0.3041 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1947 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6NP9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.2500 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.7920 _refine_hist.d_res_low 20.2630 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2020 _refine_hist.pdbx_number_residues_total 251 _refine_hist.pdbx_B_iso_mean_ligand 29.97 _refine_hist.pdbx_number_atoms_protein 1988 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_weight 1 'X-RAY DIFFRACTION' 1 1 TORSIONAL A 724 8.769 ? ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 2 TORSIONAL B 724 8.769 ? ? ? ? ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7919 3.5145 3255 . 157 3098 98.0000 . . . 0.3762 0.0000 0.2365 . . . . . . 2 . . . 'X-RAY DIFFRACTION' 3.5145 20.2638 3531 . 188 3343 100.0000 . . . 0.2734 0.0000 0.1763 . . . . . . 2 . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 '(chain A and (resid 18 through 30 or resid 32 through 35 or resid 37 through 142))' 1 2 '(chain B and (resid 18 through 30 or resid 32 through 35 or resid 37 through 141 or resid 143))' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ALA 2 . A VAL 14 . A ALA 18 A VAL 30 ? '(chain A and (resid 18 through 30 or resid 32 through 35 or resid 37 through 142))' 1 1 2 A TYR 16 . A ASN 19 . A TYR 32 A ASN 35 ? '(chain A and (resid 18 through 30 or resid 32 through 35 or resid 37 through 142))' 1 1 3 A THR 21 . A HIS 126 . A THR 37 A HIS 142 ? '(chain A and (resid 18 through 30 or resid 32 through 35 or resid 37 through 142))' 1 2 1 B ALA 2 . B VAL 14 . B ALA 18 B VAL 30 ? '(chain B and (resid 18 through 30 or resid 32 through 35 or resid 37 through 141 or resid 143))' 1 2 2 B TYR 16 . B ASN 19 . B TYR 32 B ASN 35 ? '(chain B and (resid 18 through 30 or resid 32 through 35 or resid 37 through 141 or resid 143))' 1 2 3 B THR 21 . B HIS 125 . B THR 37 B HIS 141 ? '(chain B and (resid 18 through 30 or resid 32 through 35 or resid 37 through 141 or resid 143))' 1 2 4 B HIS 127 . B HIS 127 . B HIS 143 B HIS 143 ? '(chain B and (resid 18 through 30 or resid 32 through 35 or resid 37 through 141 or resid 143))' # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 6NM8 _struct.title 'IgV-V76T BMS compound 105' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6NM8 _struct_keywords.text ;Fragment-based screening, Structure-based design, PD-L1 inhibitor, Cancer drug discovery, Immunotherapy, IMMUNE SYSTEM, immune system-inhibitor complex ; _struct_keywords.pdbx_keywords 'immune system/inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 33 ? ALA A 35 ? ASP A 49 ALA A 51 5 ? 3 HELX_P HELX_P2 AA2 HIS A 62 ? ARG A 66 ? HIS A 78 ARG A 82 5 ? 5 HELX_P HELX_P3 AA3 LEU A 72 ? SER A 77 ? LEU A 88 SER A 93 1 ? 6 HELX_P HELX_P4 AA4 LYS A 89 ? ALA A 93 ? LYS A 105 ALA A 109 5 ? 5 HELX_P HELX_P5 AA5 PRO A 117 ? HIS A 126 ? PRO A 133 HIS A 142 1 ? 10 HELX_P HELX_P6 AA6 ASP B 33 ? ALA B 35 ? ASP B 49 ALA B 51 5 ? 3 HELX_P HELX_P7 AA7 HIS B 62 ? ARG B 66 ? HIS B 78 ARG B 82 5 ? 5 HELX_P HELX_P8 AA8 LYS B 73 ? SER B 77 ? LYS B 89 SER B 93 5 ? 5 HELX_P HELX_P9 AA9 LYS B 89 ? ALA B 93 ? LYS B 105 ALA B 109 5 ? 5 HELX_P HELX_P10 AB1 PRO B 117 ? HIS B 125 ? PRO B 133 HIS B 141 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 40 A CYS 114 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 40 B CYS 114 1_555 ? ? ? ? ? ? ? 2.000 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 3 ? AA3 ? 6 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 11 ? GLU A 15 ? LEU A 27 GLU A 31 AA1 2 ALA A 105 ? ASN A 115 ? ALA A 121 ASN A 131 AA1 3 GLY A 94 ? TYR A 102 ? GLY A 110 TYR A 118 AA1 4 LEU A 37 ? MET A 43 ? LEU A 53 MET A 59 AA1 5 LYS A 46 ? VAL A 52 ? LYS A 62 VAL A 68 AA1 6 GLU A 55 ? ASP A 57 ? GLU A 71 ASP A 73 AA2 1 MET A 20 ? ILE A 22 ? MET A 36 ILE A 38 AA2 2 LEU A 83 ? ILE A 85 ? LEU A 99 ILE A 101 AA2 3 ALA A 69 ? LEU A 71 ? ALA A 85 LEU A 87 AA3 1 LEU B 11 ? GLU B 15 ? LEU B 27 GLU B 31 AA3 2 ALA B 105 ? ASN B 115 ? ALA B 121 ASN B 131 AA3 3 GLY B 94 ? TYR B 102 ? GLY B 110 TYR B 118 AA3 4 LEU B 37 ? MET B 43 ? LEU B 53 MET B 59 AA3 5 ASN B 47 ? VAL B 52 ? ASN B 63 VAL B 68 AA3 6 GLU B 55 ? ASP B 57 ? GLU B 71 ASP B 73 AA4 1 MET B 20 ? ILE B 22 ? MET B 36 ILE B 38 AA4 2 LEU B 83 ? ILE B 85 ? LEU B 99 ILE B 101 AA4 3 ALA B 69 ? LEU B 71 ? ALA B 85 LEU B 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 12 ? N TYR A 28 O THR A 111 ? O THR A 127 AA1 2 3 O ILE A 110 ? O ILE A 126 N TYR A 96 ? N TYR A 112 AA1 3 4 O MET A 99 ? O MET A 115 N TYR A 40 ? N TYR A 56 AA1 4 5 N TRP A 41 ? N TRP A 57 O ILE A 48 ? O ILE A 64 AA1 5 6 N GLN A 50 ? N GLN A 66 O ASP A 57 ? O ASP A 73 AA2 1 2 N MET A 20 ? N MET A 36 O ILE A 85 ? O ILE A 101 AA2 2 3 O GLN A 84 ? O GLN A 100 N ARG A 70 ? N ARG A 86 AA3 1 2 N TYR B 12 ? N TYR B 28 O LYS B 113 ? O LYS B 129 AA3 2 3 O ILE B 110 ? O ILE B 126 N TYR B 96 ? N TYR B 112 AA3 3 4 O MET B 99 ? O MET B 115 N TYR B 40 ? N TYR B 56 AA3 4 5 N TRP B 41 ? N TRP B 57 O ILE B 48 ? O ILE B 64 AA3 5 6 N GLN B 50 ? N GLN B 66 O ASP B 57 ? O ASP B 73 AA4 1 2 N ILE B 22 ? N ILE B 38 O LEU B 83 ? O LEU B 99 AA4 2 3 O GLN B 84 ? O GLN B 100 N ARG B 70 ? N ARG B 86 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id KSD _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'binding site for residue KSD A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 TYR A 40 ? TYR A 56 . ? 1_555 ? 2 AC1 12 GLN A 50 ? GLN A 66 . ? 1_555 ? 3 AC1 12 VAL A 52 ? VAL A 68 . ? 1_555 ? 4 AC1 12 SER A 101 ? SER A 117 . ? 1_555 ? 5 AC1 12 ALA B 2 ? ALA B 18 . ? 1_555 ? 6 AC1 12 PHE B 3 ? PHE B 19 . ? 1_555 ? 7 AC1 12 THR B 4 ? THR B 20 . ? 1_555 ? 8 AC1 12 TYR B 40 ? TYR B 56 . ? 1_555 ? 9 AC1 12 LYS B 59 ? LYS B 75 . ? 1_455 ? 10 AC1 12 ALA B 105 ? ALA B 121 . ? 1_555 ? 11 AC1 12 ASP B 106 ? ASP B 122 . ? 1_555 ? 12 AC1 12 TYR B 107 ? TYR B 123 . ? 1_555 ? # _atom_sites.entry_id 6NM8 _atom_sites.fract_transf_matrix[1][1] 0.029891 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018314 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007079 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 17 ? ? ? A . n A 1 2 ALA 2 18 18 ALA ALA A . n A 1 3 PHE 3 19 19 PHE PHE A . n A 1 4 THR 4 20 20 THR THR A . n A 1 5 VAL 5 21 21 VAL VAL A . n A 1 6 THR 6 22 22 THR THR A . n A 1 7 VAL 7 23 23 VAL VAL A . n A 1 8 PRO 8 24 24 PRO PRO A . n A 1 9 LYS 9 25 25 LYS LYS A . n A 1 10 ASP 10 26 26 ASP ASP A . n A 1 11 LEU 11 27 27 LEU LEU A . n A 1 12 TYR 12 28 28 TYR TYR A . n A 1 13 VAL 13 29 29 VAL VAL A . n A 1 14 VAL 14 30 30 VAL VAL A . n A 1 15 GLU 15 31 31 GLU GLU A . n A 1 16 TYR 16 32 32 TYR TYR A . n A 1 17 GLY 17 33 33 GLY GLY A . n A 1 18 SER 18 34 34 SER SER A . n A 1 19 ASN 19 35 35 ASN ASN A . n A 1 20 MET 20 36 36 MET MET A . n A 1 21 THR 21 37 37 THR THR A . n A 1 22 ILE 22 38 38 ILE ILE A . n A 1 23 GLU 23 39 39 GLU GLU A . n A 1 24 CYS 24 40 40 CYS CYS A . n A 1 25 LYS 25 41 41 LYS LYS A . n A 1 26 PHE 26 42 42 PHE PHE A . n A 1 27 PRO 27 43 43 PRO PRO A . n A 1 28 VAL 28 44 44 VAL VAL A . n A 1 29 GLU 29 45 45 GLU ALA A . n A 1 30 LYS 30 46 46 LYS LYS A . n A 1 31 GLN 31 47 47 GLN ALA A . n A 1 32 LEU 32 48 48 LEU LEU A . n A 1 33 ASP 33 49 49 ASP ASP A . n A 1 34 LEU 34 50 50 LEU LEU A . n A 1 35 ALA 35 51 51 ALA ALA A . n A 1 36 ALA 36 52 52 ALA ALA A . n A 1 37 LEU 37 53 53 LEU LEU A . n A 1 38 ILE 38 54 54 ILE ILE A . n A 1 39 VAL 39 55 55 VAL VAL A . n A 1 40 TYR 40 56 56 TYR TYR A . n A 1 41 TRP 41 57 57 TRP TRP A . n A 1 42 GLU 42 58 58 GLU GLU A . n A 1 43 MET 43 59 59 MET MET A . n A 1 44 GLU 44 60 60 GLU GLU A . n A 1 45 ASP 45 61 61 ASP ASP A . n A 1 46 LYS 46 62 62 LYS LYS A . n A 1 47 ASN 47 63 63 ASN ASN A . n A 1 48 ILE 48 64 64 ILE ILE A . n A 1 49 ILE 49 65 65 ILE ILE A . n A 1 50 GLN 50 66 66 GLN GLN A . n A 1 51 PHE 51 67 67 PHE PHE A . n A 1 52 VAL 52 68 68 VAL VAL A . n A 1 53 HIS 53 69 69 HIS HIS A . n A 1 54 GLY 54 70 70 GLY GLY A . n A 1 55 GLU 55 71 71 GLU GLU A . n A 1 56 GLU 56 72 72 GLU GLU A . n A 1 57 ASP 57 73 73 ASP ASP A . n A 1 58 LEU 58 74 74 LEU LEU A . n A 1 59 LYS 59 75 75 LYS LYS A . n A 1 60 THR 60 76 76 THR THR A . n A 1 61 GLN 61 77 77 GLN GLN A . n A 1 62 HIS 62 78 78 HIS HIS A . n A 1 63 SER 63 79 79 SER SER A . n A 1 64 SER 64 80 80 SER SER A . n A 1 65 TYR 65 81 81 TYR TYR A . n A 1 66 ARG 66 82 82 ARG ARG A . n A 1 67 GLN 67 83 83 GLN GLN A . n A 1 68 ARG 68 84 84 ARG ARG A . n A 1 69 ALA 69 85 85 ALA ALA A . n A 1 70 ARG 70 86 86 ARG ARG A . n A 1 71 LEU 71 87 87 LEU LEU A . n A 1 72 LEU 72 88 88 LEU LEU A . n A 1 73 LYS 73 89 89 LYS LYS A . n A 1 74 ASP 74 90 90 ASP ASP A . n A 1 75 GLN 75 91 91 GLN GLN A . n A 1 76 LEU 76 92 92 LEU LEU A . n A 1 77 SER 77 93 93 SER SER A . n A 1 78 LEU 78 94 94 LEU LEU A . n A 1 79 GLY 79 95 95 GLY GLY A . n A 1 80 ASN 80 96 96 ASN ASN A . n A 1 81 ALA 81 97 97 ALA ALA A . n A 1 82 ALA 82 98 98 ALA ALA A . n A 1 83 LEU 83 99 99 LEU LEU A . n A 1 84 GLN 84 100 100 GLN GLN A . n A 1 85 ILE 85 101 101 ILE ILE A . n A 1 86 THR 86 102 102 THR THR A . n A 1 87 ASP 87 103 103 ASP ASP A . n A 1 88 VAL 88 104 104 VAL VAL A . n A 1 89 LYS 89 105 105 LYS LYS A . n A 1 90 LEU 90 106 106 LEU LEU A . n A 1 91 GLN 91 107 107 GLN GLN A . n A 1 92 ASP 92 108 108 ASP ASP A . n A 1 93 ALA 93 109 109 ALA ALA A . n A 1 94 GLY 94 110 110 GLY GLY A . n A 1 95 VAL 95 111 111 VAL VAL A . n A 1 96 TYR 96 112 112 TYR TYR A . n A 1 97 ARG 97 113 113 ARG ARG A . n A 1 98 CYS 98 114 114 CYS CYS A . n A 1 99 MET 99 115 115 MET MET A . n A 1 100 ILE 100 116 116 ILE ILE A . n A 1 101 SER 101 117 117 SER SER A . n A 1 102 TYR 102 118 118 TYR TYR A . n A 1 103 GLY 103 119 119 GLY GLY A . n A 1 104 GLY 104 120 120 GLY GLY A . n A 1 105 ALA 105 121 121 ALA ALA A . n A 1 106 ASP 106 122 122 ASP ASP A . n A 1 107 TYR 107 123 123 TYR TYR A . n A 1 108 LYS 108 124 124 LYS LYS A . n A 1 109 ARG 109 125 125 ARG ARG A . n A 1 110 ILE 110 126 126 ILE ILE A . n A 1 111 THR 111 127 127 THR THR A . n A 1 112 VAL 112 128 128 VAL VAL A . n A 1 113 LYS 113 129 129 LYS LYS A . n A 1 114 VAL 114 130 130 VAL VAL A . n A 1 115 ASN 115 131 131 ASN ASN A . n A 1 116 ALA 116 132 132 ALA ALA A . n A 1 117 PRO 117 133 133 PRO PRO A . n A 1 118 TYR 118 134 134 TYR TYR A . n A 1 119 ALA 119 135 135 ALA ALA A . n A 1 120 ALA 120 136 136 ALA ALA A . n A 1 121 ALA 121 137 137 ALA ALA A . n A 1 122 LEU 122 138 138 LEU LEU A . n A 1 123 GLU 123 139 139 GLU GLU A . n A 1 124 HIS 124 140 140 HIS HIS A . n A 1 125 HIS 125 141 141 HIS HIS A . n A 1 126 HIS 126 142 142 HIS ALA A . n A 1 127 HIS 127 143 ? ? ? A . n A 1 128 HIS 128 144 ? ? ? A . n A 1 129 HIS 129 145 ? ? ? A . n B 1 1 MET 1 17 ? ? ? B . n B 1 2 ALA 2 18 18 ALA ALA B . n B 1 3 PHE 3 19 19 PHE PHE B . n B 1 4 THR 4 20 20 THR THR B . n B 1 5 VAL 5 21 21 VAL VAL B . n B 1 6 THR 6 22 22 THR THR B . n B 1 7 VAL 7 23 23 VAL VAL B . n B 1 8 PRO 8 24 24 PRO PRO B . n B 1 9 LYS 9 25 25 LYS LYS B . n B 1 10 ASP 10 26 26 ASP ASP B . n B 1 11 LEU 11 27 27 LEU LEU B . n B 1 12 TYR 12 28 28 TYR TYR B . n B 1 13 VAL 13 29 29 VAL VAL B . n B 1 14 VAL 14 30 30 VAL VAL B . n B 1 15 GLU 15 31 31 GLU GLU B . n B 1 16 TYR 16 32 32 TYR TYR B . n B 1 17 GLY 17 33 33 GLY GLY B . n B 1 18 SER 18 34 34 SER SER B . n B 1 19 ASN 19 35 35 ASN ASN B . n B 1 20 MET 20 36 36 MET MET B . n B 1 21 THR 21 37 37 THR THR B . n B 1 22 ILE 22 38 38 ILE ILE B . n B 1 23 GLU 23 39 39 GLU GLU B . n B 1 24 CYS 24 40 40 CYS CYS B . n B 1 25 LYS 25 41 41 LYS LYS B . n B 1 26 PHE 26 42 42 PHE PHE B . n B 1 27 PRO 27 43 43 PRO PRO B . n B 1 28 VAL 28 44 44 VAL VAL B . n B 1 29 GLU 29 45 45 GLU ALA B . n B 1 30 LYS 30 46 46 LYS LYS B . n B 1 31 GLN 31 47 47 GLN ALA B . n B 1 32 LEU 32 48 48 LEU LEU B . n B 1 33 ASP 33 49 49 ASP ASP B . n B 1 34 LEU 34 50 50 LEU LEU B . n B 1 35 ALA 35 51 51 ALA ALA B . n B 1 36 ALA 36 52 52 ALA ALA B . n B 1 37 LEU 37 53 53 LEU LEU B . n B 1 38 ILE 38 54 54 ILE ILE B . n B 1 39 VAL 39 55 55 VAL VAL B . n B 1 40 TYR 40 56 56 TYR TYR B . n B 1 41 TRP 41 57 57 TRP TRP B . n B 1 42 GLU 42 58 58 GLU GLU B . n B 1 43 MET 43 59 59 MET MET B . n B 1 44 GLU 44 60 60 GLU GLU B . n B 1 45 ASP 45 61 61 ASP ASP B . n B 1 46 LYS 46 62 62 LYS LYS B . n B 1 47 ASN 47 63 63 ASN ASN B . n B 1 48 ILE 48 64 64 ILE ILE B . n B 1 49 ILE 49 65 65 ILE ILE B . n B 1 50 GLN 50 66 66 GLN GLN B . n B 1 51 PHE 51 67 67 PHE PHE B . n B 1 52 VAL 52 68 68 VAL VAL B . n B 1 53 HIS 53 69 69 HIS HIS B . n B 1 54 GLY 54 70 70 GLY GLY B . n B 1 55 GLU 55 71 71 GLU GLU B . n B 1 56 GLU 56 72 72 GLU GLU B . n B 1 57 ASP 57 73 73 ASP ASP B . n B 1 58 LEU 58 74 74 LEU LEU B . n B 1 59 LYS 59 75 75 LYS LYS B . n B 1 60 THR 60 76 76 THR THR B . n B 1 61 GLN 61 77 77 GLN GLN B . n B 1 62 HIS 62 78 78 HIS HIS B . n B 1 63 SER 63 79 79 SER SER B . n B 1 64 SER 64 80 80 SER SER B . n B 1 65 TYR 65 81 81 TYR TYR B . n B 1 66 ARG 66 82 82 ARG ARG B . n B 1 67 GLN 67 83 83 GLN GLN B . n B 1 68 ARG 68 84 84 ARG ARG B . n B 1 69 ALA 69 85 85 ALA ALA B . n B 1 70 ARG 70 86 86 ARG ARG B . n B 1 71 LEU 71 87 87 LEU LEU B . n B 1 72 LEU 72 88 88 LEU LEU B . n B 1 73 LYS 73 89 89 LYS LYS B . n B 1 74 ASP 74 90 90 ASP ASP B . n B 1 75 GLN 75 91 91 GLN GLN B . n B 1 76 LEU 76 92 92 LEU LEU B . n B 1 77 SER 77 93 93 SER SER B . n B 1 78 LEU 78 94 94 LEU LEU B . n B 1 79 GLY 79 95 95 GLY GLY B . n B 1 80 ASN 80 96 96 ASN ASN B . n B 1 81 ALA 81 97 97 ALA ALA B . n B 1 82 ALA 82 98 98 ALA ALA B . n B 1 83 LEU 83 99 99 LEU LEU B . n B 1 84 GLN 84 100 100 GLN GLN B . n B 1 85 ILE 85 101 101 ILE ILE B . n B 1 86 THR 86 102 102 THR THR B . n B 1 87 ASP 87 103 103 ASP ASP B . n B 1 88 VAL 88 104 104 VAL VAL B . n B 1 89 LYS 89 105 105 LYS LYS B . n B 1 90 LEU 90 106 106 LEU LEU B . n B 1 91 GLN 91 107 107 GLN GLN B . n B 1 92 ASP 92 108 108 ASP ASP B . n B 1 93 ALA 93 109 109 ALA ALA B . n B 1 94 GLY 94 110 110 GLY GLY B . n B 1 95 VAL 95 111 111 VAL VAL B . n B 1 96 TYR 96 112 112 TYR TYR B . n B 1 97 ARG 97 113 113 ARG ARG B . n B 1 98 CYS 98 114 114 CYS CYS B . n B 1 99 MET 99 115 115 MET MET B . n B 1 100 ILE 100 116 116 ILE ILE B . n B 1 101 SER 101 117 117 SER SER B . n B 1 102 TYR 102 118 118 TYR TYR B . n B 1 103 GLY 103 119 119 GLY GLY B . n B 1 104 GLY 104 120 120 GLY GLY B . n B 1 105 ALA 105 121 121 ALA ALA B . n B 1 106 ASP 106 122 122 ASP ASP B . n B 1 107 TYR 107 123 123 TYR TYR B . n B 1 108 LYS 108 124 124 LYS LYS B . n B 1 109 ARG 109 125 125 ARG ARG B . n B 1 110 ILE 110 126 126 ILE ILE B . n B 1 111 THR 111 127 127 THR THR B . n B 1 112 VAL 112 128 128 VAL VAL B . n B 1 113 LYS 113 129 129 LYS LYS B . n B 1 114 VAL 114 130 130 VAL VAL B . n B 1 115 ASN 115 131 131 ASN ASN B . n B 1 116 ALA 116 132 132 ALA ALA B . n B 1 117 PRO 117 133 133 PRO PRO B . n B 1 118 TYR 118 134 134 TYR TYR B . n B 1 119 ALA 119 135 135 ALA ALA B . n B 1 120 ALA 120 136 136 ALA ALA B . n B 1 121 ALA 121 137 137 ALA ALA B . n B 1 122 LEU 122 138 138 LEU LEU B . n B 1 123 GLU 123 139 139 GLU GLU B . n B 1 124 HIS 124 140 140 HIS HIS B . n B 1 125 HIS 125 141 141 HIS HIS B . n B 1 126 HIS 126 142 142 HIS HIS B . n B 1 127 HIS 127 143 143 HIS ALA B . n B 1 128 HIS 128 144 ? ? ? B . n B 1 129 HIS 129 145 ? ? ? B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id KSD _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id KSD _pdbx_nonpoly_scheme.auth_mon_id DRG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1400 ? 1 MORE -4 ? 1 'SSA (A^2)' 13230 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-02-20 2 'Structure model' 1 1 2019-02-27 3 'Structure model' 1 2 2019-11-27 4 'Structure model' 1 3 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_pdbx_audit_support.funding_organization' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 8 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 9 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 10 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 11 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 12 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 13 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 14 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 40 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 40 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 40 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 121.42 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 7.22 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 32 ? ? -35.87 134.76 2 1 LYS A 46 ? ? -113.92 -153.93 3 1 GLU A 60 ? ? 50.95 -112.94 4 1 SER A 79 ? ? -27.74 -60.09 5 1 SER A 80 ? ? -67.90 2.11 6 1 LYS B 46 ? ? -124.19 -138.32 7 1 SER B 79 ? ? -26.74 -57.12 8 1 GLN B 83 ? ? 52.71 14.73 9 1 LEU B 88 ? ? -69.02 92.94 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 45 ? CG ? A GLU 29 CG 2 1 Y 1 A GLU 45 ? CD ? A GLU 29 CD 3 1 Y 1 A GLU 45 ? OE1 ? A GLU 29 OE1 4 1 Y 1 A GLU 45 ? OE2 ? A GLU 29 OE2 5 1 Y 1 A GLN 47 ? CG ? A GLN 31 CG 6 1 Y 1 A GLN 47 ? CD ? A GLN 31 CD 7 1 Y 1 A GLN 47 ? OE1 ? A GLN 31 OE1 8 1 Y 1 A GLN 47 ? NE2 ? A GLN 31 NE2 9 1 Y 1 A HIS 142 ? CG ? A HIS 126 CG 10 1 Y 1 A HIS 142 ? ND1 ? A HIS 126 ND1 11 1 Y 1 A HIS 142 ? CD2 ? A HIS 126 CD2 12 1 Y 1 A HIS 142 ? CE1 ? A HIS 126 CE1 13 1 Y 1 A HIS 142 ? NE2 ? A HIS 126 NE2 14 1 Y 1 B GLU 45 ? CG ? B GLU 29 CG 15 1 Y 1 B GLU 45 ? CD ? B GLU 29 CD 16 1 Y 1 B GLU 45 ? OE1 ? B GLU 29 OE1 17 1 Y 1 B GLU 45 ? OE2 ? B GLU 29 OE2 18 1 Y 1 B GLN 47 ? CG ? B GLN 31 CG 19 1 Y 1 B GLN 47 ? CD ? B GLN 31 CD 20 1 Y 1 B GLN 47 ? OE1 ? B GLN 31 OE1 21 1 Y 1 B GLN 47 ? NE2 ? B GLN 31 NE2 22 1 Y 1 B HIS 143 ? CG ? B HIS 127 CG 23 1 Y 1 B HIS 143 ? ND1 ? B HIS 127 ND1 24 1 Y 1 B HIS 143 ? CD2 ? B HIS 127 CD2 25 1 Y 1 B HIS 143 ? CE1 ? B HIS 127 CE1 26 1 Y 1 B HIS 143 ? NE2 ? B HIS 127 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 17 ? A MET 1 2 1 Y 1 A HIS 143 ? A HIS 127 3 1 Y 1 A HIS 144 ? A HIS 128 4 1 Y 1 A HIS 145 ? A HIS 129 5 1 Y 1 B MET 17 ? B MET 1 6 1 Y 1 B HIS 144 ? B HIS 128 7 1 Y 1 B HIS 145 ? B HIS 129 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 KSD C4 C Y N 180 KSD C14 C N N 181 KSD C5 C Y N 182 KSD C6 C Y N 183 KSD C11 C Y N 184 KSD C7 C Y N 185 KSD C8 C Y N 186 KSD C9 C Y N 187 KSD C10 C Y N 188 KSD C12 C Y N 189 KSD C13 C N N 190 KSD N1 N N N 191 KSD C3 C Y N 192 KSD C1 C Y N 193 KSD C15 C Y N 194 KSD C16 C Y N 195 KSD C17 C Y N 196 KSD C18 C Y N 197 KSD C19 C Y N 198 KSD C2 C Y N 199 KSD C20 C Y N 200 KSD C21 C N N 201 KSD C22 C N N 202 KSD C23 C N N 203 KSD C24 C N R 204 KSD C25 C N N 205 KSD C26 C N N 206 KSD O1 O N N 207 KSD O2 O N N 208 KSD O3 O N N 209 KSD O4 O N N 210 KSD O5 O N N 211 KSD H1 H N N 212 KSD H2 H N N 213 KSD H3 H N N 214 KSD H4 H N N 215 KSD H5 H N N 216 KSD H6 H N N 217 KSD H7 H N N 218 KSD H8 H N N 219 KSD H9 H N N 220 KSD H10 H N N 221 KSD H11 H N N 222 KSD H12 H N N 223 KSD H13 H N N 224 KSD H15 H N N 225 KSD H16 H N N 226 KSD H17 H N N 227 KSD H18 H N N 228 KSD H19 H N N 229 KSD H20 H N N 230 KSD H21 H N N 231 KSD H22 H N N 232 KSD H23 H N N 233 KSD H24 H N N 234 KSD H25 H N N 235 KSD H26 H N N 236 KSD H27 H N N 237 KSD H28 H N N 238 KSD H29 H N N 239 KSD H30 H N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 PHE N N N N 308 PHE CA C N S 309 PHE C C N N 310 PHE O O N N 311 PHE CB C N N 312 PHE CG C Y N 313 PHE CD1 C Y N 314 PHE CD2 C Y N 315 PHE CE1 C Y N 316 PHE CE2 C Y N 317 PHE CZ C Y N 318 PHE OXT O N N 319 PHE H H N N 320 PHE H2 H N N 321 PHE HA H N N 322 PHE HB2 H N N 323 PHE HB3 H N N 324 PHE HD1 H N N 325 PHE HD2 H N N 326 PHE HE1 H N N 327 PHE HE2 H N N 328 PHE HZ H N N 329 PHE HXT H N N 330 PRO N N N N 331 PRO CA C N S 332 PRO C C N N 333 PRO O O N N 334 PRO CB C N N 335 PRO CG C N N 336 PRO CD C N N 337 PRO OXT O N N 338 PRO H H N N 339 PRO HA H N N 340 PRO HB2 H N N 341 PRO HB3 H N N 342 PRO HG2 H N N 343 PRO HG3 H N N 344 PRO HD2 H N N 345 PRO HD3 H N N 346 PRO HXT H N N 347 SER N N N N 348 SER CA C N S 349 SER C C N N 350 SER O O N N 351 SER CB C N N 352 SER OG O N N 353 SER OXT O N N 354 SER H H N N 355 SER H2 H N N 356 SER HA H N N 357 SER HB2 H N N 358 SER HB3 H N N 359 SER HG H N N 360 SER HXT H N N 361 THR N N N N 362 THR CA C N S 363 THR C C N N 364 THR O O N N 365 THR CB C N R 366 THR OG1 O N N 367 THR CG2 C N N 368 THR OXT O N N 369 THR H H N N 370 THR H2 H N N 371 THR HA H N N 372 THR HB H N N 373 THR HG1 H N N 374 THR HG21 H N N 375 THR HG22 H N N 376 THR HG23 H N N 377 THR HXT H N N 378 TRP N N N N 379 TRP CA C N S 380 TRP C C N N 381 TRP O O N N 382 TRP CB C N N 383 TRP CG C Y N 384 TRP CD1 C Y N 385 TRP CD2 C Y N 386 TRP NE1 N Y N 387 TRP CE2 C Y N 388 TRP CE3 C Y N 389 TRP CZ2 C Y N 390 TRP CZ3 C Y N 391 TRP CH2 C Y N 392 TRP OXT O N N 393 TRP H H N N 394 TRP H2 H N N 395 TRP HA H N N 396 TRP HB2 H N N 397 TRP HB3 H N N 398 TRP HD1 H N N 399 TRP HE1 H N N 400 TRP HE3 H N N 401 TRP HZ2 H N N 402 TRP HZ3 H N N 403 TRP HH2 H N N 404 TRP HXT H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 KSD C21 O2 sing N N 171 KSD O2 C19 sing N N 172 KSD C19 C20 doub Y N 173 KSD C19 C18 sing Y N 174 KSD N1 C23 sing N N 175 KSD N1 C24 sing N N 176 KSD C20 C15 sing Y N 177 KSD C13 C1 sing N N 178 KSD C26 C24 sing N N 179 KSD C23 C18 sing N N 180 KSD C18 C17 doub Y N 181 KSD C24 C25 sing N N 182 KSD C14 O1 sing N N 183 KSD C14 C6 sing N N 184 KSD C10 C9 doub Y N 185 KSD C10 C11 sing Y N 186 KSD C9 C8 sing Y N 187 KSD C11 C12 doub Y N 188 KSD C15 O1 sing N N 189 KSD C15 C16 doub Y N 190 KSD C1 C6 doub Y N 191 KSD C1 C2 sing Y N 192 KSD C8 C7 doub Y N 193 KSD C12 C7 sing Y N 194 KSD C7 C2 sing N N 195 KSD C6 C5 sing Y N 196 KSD C17 C16 sing Y N 197 KSD C17 O3 sing N N 198 KSD C25 O4 doub N N 199 KSD C25 O5 sing N N 200 KSD C2 C3 doub Y N 201 KSD O3 C22 sing N N 202 KSD C5 C4 doub Y N 203 KSD C3 C4 sing Y N 204 KSD C4 H1 sing N N 205 KSD C14 H2 sing N N 206 KSD C14 H3 sing N N 207 KSD C5 H4 sing N N 208 KSD C11 H5 sing N N 209 KSD C8 H6 sing N N 210 KSD C9 H7 sing N N 211 KSD C10 H8 sing N N 212 KSD C12 H9 sing N N 213 KSD C13 H10 sing N N 214 KSD C13 H11 sing N N 215 KSD C13 H12 sing N N 216 KSD N1 H13 sing N N 217 KSD C3 H15 sing N N 218 KSD C16 H16 sing N N 219 KSD C20 H17 sing N N 220 KSD C21 H18 sing N N 221 KSD C21 H19 sing N N 222 KSD C21 H20 sing N N 223 KSD C22 H21 sing N N 224 KSD C22 H22 sing N N 225 KSD C22 H23 sing N N 226 KSD C23 H24 sing N N 227 KSD C23 H25 sing N N 228 KSD C24 H26 sing N N 229 KSD C26 H27 sing N N 230 KSD C26 H28 sing N N 231 KSD C26 H29 sing N N 232 KSD O5 H30 sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 TYR N CA sing N N 395 TYR N H sing N N 396 TYR N H2 sing N N 397 TYR CA C sing N N 398 TYR CA CB sing N N 399 TYR CA HA sing N N 400 TYR C O doub N N 401 TYR C OXT sing N N 402 TYR CB CG sing N N 403 TYR CB HB2 sing N N 404 TYR CB HB3 sing N N 405 TYR CG CD1 doub Y N 406 TYR CG CD2 sing Y N 407 TYR CD1 CE1 sing Y N 408 TYR CD1 HD1 sing N N 409 TYR CD2 CE2 doub Y N 410 TYR CD2 HD2 sing N N 411 TYR CE1 CZ doub Y N 412 TYR CE1 HE1 sing N N 413 TYR CE2 CZ sing Y N 414 TYR CE2 HE2 sing N N 415 TYR CZ OH sing N N 416 TYR OH HH sing N N 417 TYR OXT HXT sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Center for Research Resources (NIH/NCRR)' 'United States' 5T32GM065086 1 'National Science Foundation (NSF, United States)' 'United States' 0922862 2 'National Institutes of Health/National Center for Research Resources (NIH/NCRR)' 'United States' 'S10 RR025677' 3 'National Institutes of Health/National Center for Research Resources (NIH/NCRR)' 'United States' 'S10 RR026915' 4 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 5 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "N-({2,6-dimethoxy-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)-D-alanine" _pdbx_entity_nonpoly.comp_id KSD # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6NP9 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #