data_6NNB # _entry.id 6NNB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6NNB pdb_00006nnb 10.2210/pdb6nnb/pdb WWPDB D_1000238594 ? ? BMRB 30559 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'The structure of a highly conserved picocyanobacterial protein reveals a novel tRNA binding domain' _pdbx_database_related.db_id 30559 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6NNB _pdbx_database_status.recvd_initial_deposition_date 2019-01-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bauer, K.M.' 1 0000-0003-4015-2781 'Pelligrini, M.' 2 0000-0003-3817-4412 'Ragusa, M.J.' 3 0000-0002-0231-0876 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 294 _citation.language ? _citation.page_first 14333 _citation.page_last 14344 _citation.title 'The structure of a highly-conserved picocyanobacterial protein reveals a Tudor domain with an RNA-binding function.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.007938 _citation.pdbx_database_id_PubMed 31391250 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bauer, K.M.' 1 ? primary 'Dicovitsky, R.' 2 ? primary 'Pellegrini, M.' 3 ? primary 'Zhaxybayeva, O.' 4 ? primary 'Ragusa, M.J.' 5 0000-0002-0231-0876 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Prochlorococcus/Synechococcus Hyper Conserved Protein' _entity.formula_weight 6471.392 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name PSHCP # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SNAMELDLQPGDVVKVLESAALGWVRARVIRVKSGGRVVVQSDQGREFTARGNQVRLIE _entity_poly.pdbx_seq_one_letter_code_can SNAMELDLQPGDVVKVLESAALGWVRARVIRVKSGGRVVVQSDQGREFTARGNQVRLIE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 GLU n 1 6 LEU n 1 7 ASP n 1 8 LEU n 1 9 GLN n 1 10 PRO n 1 11 GLY n 1 12 ASP n 1 13 VAL n 1 14 VAL n 1 15 LYS n 1 16 VAL n 1 17 LEU n 1 18 GLU n 1 19 SER n 1 20 ALA n 1 21 ALA n 1 22 LEU n 1 23 GLY n 1 24 TRP n 1 25 VAL n 1 26 ARG n 1 27 ALA n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 ARG n 1 32 VAL n 1 33 LYS n 1 34 SER n 1 35 GLY n 1 36 GLY n 1 37 ARG n 1 38 VAL n 1 39 VAL n 1 40 VAL n 1 41 GLN n 1 42 SER n 1 43 ASP n 1 44 GLN n 1 45 GLY n 1 46 ARG n 1 47 GLU n 1 48 PHE n 1 49 THR n 1 50 ALA n 1 51 ARG n 1 52 GLY n 1 53 ASN n 1 54 GLN n 1 55 VAL n 1 56 ARG n 1 57 LEU n 1 58 ILE n 1 59 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 59 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene P9303_06811 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'MIT 9303' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Prochlorococcus marinus (strain MIT 9303)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 59922 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A2C7H2_PROM3 _struct_ref.pdbx_db_accession A2C7H2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MELDLQPGDVVKVLESAALGWVRARVIRVKSGGRVVVQSDQGREFTARGNQVRLIE _struct_ref.pdbx_align_begin 23 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6NNB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 59 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A2C7H2 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 78 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 59 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6NNB SER A 1 ? UNP A2C7H2 ? ? 'expression tag' 1 1 1 6NNB ASN A 2 ? UNP A2C7H2 ? ? 'expression tag' 2 2 1 6NNB ALA A 3 ? UNP A2C7H2 ? ? 'expression tag' 3 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 3D_15N-separated_NOESY 1 isotropic 2 1 2 3D_13C-separated_NOESY 1 isotropic 3 1 1 '2D 1H-15N HSQC' 1 isotropic 4 1 2 '2D 1H-13C HSQC aliphatic' 1 isotropic 5 1 2 '3D HNCACB' 1 isotropic 6 1 2 '3D HNCA' 1 isotropic 7 1 2 '3D HNCO' 1 isotropic 8 1 2 '3D HN(CO)CA' 1 isotropic 9 1 2 '3D CBCA(CO)NH' 1 isotropic 10 1 2 '3D HBHA(CO)NH' 1 isotropic 11 1 2 '3D H(CCO)NH' 1 isotropic 12 1 2 '3D HCCH-COSY' 1 isotropic 13 1 2 '3D HCCH-TOCSY' 1 isotropic 14 1 2 '3D HN(CA)CO' 1 isotropic 15 1 2 '3D H(CCO)NH' 1 isotropic 16 1 1 2D_NOESY 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 200 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1.4 mM [U-15N] PSHCP, 20 mM sodium phosphate, 200 mM sodium chloride, 0.2 mM TCEP, 99% H2O, 1% D2O' '99% H2O, 1% D2O' 15N_sample solution ? 2 '1.6 mM [U-15N, -13C] PSHCP, 20 mM sodium phosphate, 200 mM sodium chloride, 0.2 mM TCEP, 99% H2O, 1% D2O' '99% H2O, 1% D2O' 15N_13C_sample solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 6NNB _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'water refinement' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6NNB _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria '20 structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6NNB _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 5 processing TopSpin ? 'Bruker Biospin' 1 refinement CNS ? 'Brunger A. T. et.al.' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 4 'peak picking' CARA ? 'Keller and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6NNB _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6NNB _struct.title 'Solution structure of the Tudor domain of PSHCP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6NNB _struct_keywords.text 'NMR spectroscopy, cyanobacteria, tRNA, Tudor domains, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 47 ? ALA A 50 ? GLU A 47 ALA A 50 AA1 2 VAL A 38 ? SER A 42 ? VAL A 38 SER A 42 AA1 3 TRP A 24 ? VAL A 32 ? TRP A 24 VAL A 32 AA1 4 VAL A 13 ? LEU A 17 ? VAL A 13 LEU A 17 AA1 5 VAL A 55 ? ARG A 56 ? VAL A 55 ARG A 56 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O PHE A 48 ? O PHE A 48 N VAL A 40 ? N VAL A 40 AA1 2 3 O VAL A 39 ? O VAL A 39 N ARG A 31 ? N ARG A 31 AA1 3 4 O VAL A 25 ? O VAL A 25 N VAL A 16 ? N VAL A 16 AA1 4 5 N LYS A 15 ? N LYS A 15 O ARG A 56 ? O ARG A 56 # _atom_sites.entry_id 6NNB _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLU 59 59 59 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-21 2 'Structure model' 1 1 2019-10-09 3 'Structure model' 1 2 2020-01-01 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_nmr_spectrometer 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_pdbx_audit_support.funding_organization' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 PSHCP 1.4 ? mM '[U-15N]' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 'sodium chloride' 200 ? mM 'natural abundance' 1 TCEP 0.2 ? mM 'natural abundance' 2 PSHCP 1.6 ? mM '[U-15N, -13C]' 2 'sodium phosphate' 20 ? mM 'natural abundance' 2 'sodium chloride' 200 ? mM 'natural abundance' 2 TCEP 0.2 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ1 A LYS 15 ? ? OXT A GLU 59 ? ? 1.53 2 1 HH22 A ARG 26 ? ? OD1 A ASP 43 ? ? 1.59 3 3 OE2 A GLU 18 ? ? HH21 A ARG 46 ? ? 1.58 4 5 H2 A SER 1 ? ? OE2 A GLU 5 ? ? 1.56 5 5 HH21 A ARG 56 ? ? OE1 A GLU 59 ? ? 1.57 6 6 HZ1 A LYS 15 ? ? O A GLU 59 ? ? 1.52 7 6 HH11 A ARG 26 ? ? OD2 A ASP 43 ? ? 1.59 8 7 H1 A SER 1 ? ? OE2 A GLU 5 ? ? 1.53 9 7 OE1 A GLU 18 ? ? HH21 A ARG 46 ? ? 1.56 10 7 HH21 A ARG 56 ? ? OE1 A GLU 59 ? ? 1.57 11 7 HH21 A ARG 26 ? ? OD1 A ASP 43 ? ? 1.59 12 8 OD1 A ASP 7 ? ? HH12 A ARG 56 ? ? 1.59 13 8 HH11 A ARG 26 ? ? OD2 A ASP 43 ? ? 1.60 14 8 HH21 A ARG 31 ? ? OE2 A GLU 47 ? ? 1.60 15 9 OE2 A GLU 18 ? ? HH21 A ARG 46 ? ? 1.56 16 9 HH22 A ARG 56 ? ? OE2 A GLU 59 ? ? 1.58 17 9 H2 A SER 1 ? ? OE2 A GLU 5 ? ? 1.58 18 10 HZ1 A LYS 15 ? ? OXT A GLU 59 ? ? 1.53 19 10 HH21 A ARG 56 ? ? OE2 A GLU 59 ? ? 1.54 20 11 H2 A SER 1 ? ? OE2 A GLU 5 ? ? 1.53 21 11 HZ1 A LYS 15 ? ? OE2 A GLU 59 ? ? 1.55 22 11 HZ3 A LYS 15 ? ? O A GLU 59 ? ? 1.59 23 12 HZ2 A LYS 15 ? ? OE1 A GLU 59 ? ? 1.54 24 12 HZ1 A LYS 15 ? ? OXT A GLU 59 ? ? 1.58 25 12 HH21 A ARG 31 ? ? OE2 A GLU 47 ? ? 1.58 26 12 HH21 A ARG 26 ? ? OE2 A GLU 59 ? ? 1.59 27 13 OD2 A ASP 7 ? ? HH21 A ARG 56 ? ? 1.58 28 13 HH21 A ARG 31 ? ? OE2 A GLU 47 ? ? 1.59 29 14 OE1 A GLU 18 ? ? HH12 A ARG 46 ? ? 1.57 30 14 H1 A SER 1 ? ? OE1 A GLU 5 ? ? 1.59 31 14 HH21 A ARG 31 ? ? OE2 A GLU 47 ? ? 1.60 32 15 HH21 A ARG 56 ? ? OE1 A GLU 59 ? ? 1.56 33 16 HH22 A ARG 56 ? ? OE1 A GLU 59 ? ? 1.57 34 17 H2 A SER 1 ? ? OE2 A GLU 5 ? ? 1.52 35 17 OE2 A GLU 18 ? ? HE A ARG 46 ? ? 1.58 36 18 HH21 A ARG 26 ? ? OD2 A ASP 43 ? ? 1.55 37 18 OE1 A GLU 18 ? ? HH22 A ARG 46 ? ? 1.56 38 18 OD1 A ASP 7 ? ? HH22 A ARG 56 ? ? 1.59 39 19 OE2 A GLU 18 ? ? HH21 A ARG 46 ? ? 1.57 40 20 HZ1 A LYS 15 ? ? O A GLU 59 ? ? 1.54 41 20 HH21 A ARG 26 ? ? OD2 A ASP 43 ? ? 1.55 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 7 N A ARG 31 ? ? CA A ARG 31 ? ? 1.339 1.459 -0.120 0.020 N 2 8 N A ARG 31 ? ? CA A ARG 31 ? ? 1.328 1.459 -0.131 0.020 N 3 12 N A ARG 31 ? ? CA A ARG 31 ? ? 1.338 1.459 -0.121 0.020 N 4 19 N A ARG 31 ? ? CA A ARG 31 ? ? 1.336 1.459 -0.123 0.020 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 3 ? ? -98.33 -66.76 2 1 LYS A 33 ? ? -103.01 -149.54 3 1 SER A 34 ? ? -50.29 99.90 4 1 ILE A 58 ? ? 33.46 66.69 5 2 ALA A 3 ? ? -105.50 -67.78 6 2 MET A 4 ? ? -168.46 -26.02 7 2 GLU A 5 ? ? -132.89 -114.39 8 2 LEU A 6 ? ? -108.23 41.36 9 2 ASP A 7 ? ? -62.09 38.42 10 2 ASP A 43 ? ? -65.32 2.88 11 2 PHE A 48 ? ? -170.90 144.86 12 2 LEU A 57 ? ? -67.85 -171.86 13 3 ALA A 3 ? ? -176.19 -37.63 14 3 MET A 4 ? ? -161.29 31.40 15 3 LEU A 22 ? ? -129.83 -53.46 16 3 LEU A 57 ? ? -57.97 -163.92 17 3 ILE A 58 ? ? -105.84 64.10 18 4 ALA A 3 ? ? -158.26 31.69 19 4 GLU A 18 ? ? -80.21 -71.60 20 4 LEU A 22 ? ? -127.34 -52.05 21 4 ASP A 43 ? ? -28.26 -58.83 22 4 ILE A 58 ? ? 75.32 150.05 23 5 LEU A 22 ? ? -130.98 -45.21 24 5 LYS A 33 ? ? -121.94 -71.63 25 5 LEU A 57 ? ? -71.89 -169.73 26 6 ASN A 2 ? ? -116.04 -168.35 27 6 GLU A 5 ? ? -116.89 -152.82 28 6 SER A 34 ? ? -171.95 99.92 29 6 LEU A 57 ? ? -61.83 -176.17 30 6 ILE A 58 ? ? -59.98 106.95 31 7 ASN A 2 ? ? 72.14 109.01 32 7 ALA A 3 ? ? -50.61 93.89 33 7 MET A 4 ? ? -165.49 2.11 34 7 LEU A 22 ? ? -130.02 -46.48 35 7 ILE A 58 ? ? 38.13 78.73 36 8 ASP A 7 ? ? -79.82 23.53 37 8 LEU A 57 ? ? -69.19 -170.43 38 9 ASN A 2 ? ? -37.96 89.46 39 9 ALA A 3 ? ? 164.64 -20.03 40 9 ALA A 21 ? ? -178.43 -43.52 41 9 LEU A 57 ? ? -75.92 -153.17 42 10 ASP A 7 ? ? -77.52 20.30 43 10 SER A 34 ? ? 75.58 162.92 44 10 ILE A 58 ? ? -50.06 107.41 45 11 ASN A 2 ? ? 78.61 91.86 46 11 ALA A 3 ? ? -169.58 -51.30 47 11 MET A 4 ? ? -165.65 30.27 48 11 PRO A 10 ? ? -62.41 71.90 49 11 ARG A 37 ? ? -140.22 34.99 50 12 ALA A 3 ? ? 77.56 30.20 51 12 MET A 4 ? ? -156.97 6.34 52 12 ILE A 58 ? ? 75.25 145.42 53 13 LEU A 22 ? ? -130.97 -47.69 54 14 ASN A 2 ? ? -34.17 92.51 55 14 ALA A 3 ? ? -143.14 -40.81 56 14 ASP A 7 ? ? -63.93 37.19 57 14 LEU A 8 ? ? -164.28 40.85 58 15 ALA A 3 ? ? 76.00 145.46 59 15 MET A 4 ? ? -109.12 -158.66 60 15 ILE A 58 ? ? -63.84 93.19 61 16 ARG A 37 ? ? -95.91 41.15 62 17 ASN A 2 ? ? -172.01 -171.18 63 18 PRO A 10 ? ? -69.67 94.11 64 19 ALA A 3 ? ? -178.97 25.68 65 19 GLU A 5 ? ? -76.68 30.19 66 19 LYS A 33 ? ? -99.82 -150.17 67 19 ILE A 58 ? ? -68.93 89.67 68 20 ASN A 2 ? ? 67.32 -168.00 69 20 ALA A 3 ? ? -101.55 77.97 70 20 GLU A 5 ? ? -133.06 -152.15 71 20 ALA A 21 ? ? 177.12 -41.30 72 20 LYS A 33 ? ? -96.92 -60.42 73 20 LEU A 57 ? ? -71.92 -161.22 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 12 ARG A 46 ? ? 0.084 'SIDE CHAIN' 2 16 ARG A 37 ? ? 0.074 'SIDE CHAIN' 3 17 ARG A 26 ? ? 0.075 'SIDE CHAIN' # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM128663 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' P20GM113132 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #