HEADER DNA BINDING PROTEIN 16-JAN-19 6NOO TITLE STRUCTURE OF CYANOTHECE MCDA-AMPPNP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAINTENANCE OF CARBOXYSOME POSITIONING A PROTEIN, MCDA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYANOTHECE; SOURCE 3 ORGANISM_TAXID: 43988; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MCDA, MCDB, CARBOXYSOME, PARA-LIKE, WALKER A, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER REVDAT 4 11-OCT-23 6NOO 1 REMARK REVDAT 3 26-JUN-19 6NOO 1 JRNL REVDAT 2 05-JUN-19 6NOO 1 JRNL REVDAT 1 24-APR-19 6NOO 0 JRNL AUTH M.A.SCHUMACHER,M.HENDERSON,H.ZHANG JRNL TITL STRUCTURES OF MAINTENANCE OF CARBOXYSOME DISTRIBUTION JRNL TITL 2 WALKER-BOX MCDA AND MCDB ADAPTOR HOMOLOGS. JRNL REF NUCLEIC ACIDS RES. V. 47 5950 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31106331 JRNL DOI 10.1093/NAR/GKZ314 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 134.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.870 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 81993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.520 REMARK 3 FREE R VALUE TEST SET COUNT : 3703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1134.3330 - 5.3861 1.00 8045 377 0.2075 0.2146 REMARK 3 2 5.3861 - 4.2750 1.00 8057 371 0.1465 0.1795 REMARK 3 3 4.2750 - 3.7346 1.00 8031 383 0.1575 0.1915 REMARK 3 4 3.7346 - 3.3931 1.00 8026 384 0.1739 0.1921 REMARK 3 5 3.3931 - 3.1499 1.00 8039 384 0.1989 0.2331 REMARK 3 6 3.1499 - 2.9641 1.00 8035 374 0.2334 0.2857 REMARK 3 7 2.9641 - 2.8157 1.00 8007 389 0.2699 0.3251 REMARK 3 8 2.8157 - 2.6931 0.99 7955 373 0.3198 0.3642 REMARK 3 9 2.6931 - 2.5894 0.93 7424 353 0.3480 0.3801 REMARK 3 10 2.5894 - 2.5000 0.83 6671 315 0.3640 0.3761 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 54.03 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.37050 REMARK 3 B22 (A**2) : 2.37050 REMARK 3 B33 (A**2) : -4.74110 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4003 REMARK 3 ANGLE : 1.168 5432 REMARK 3 CHIRALITY : 0.072 632 REMARK 3 PLANARITY : 0.004 695 REMARK 3 DIHEDRAL : 16.018 1481 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -1.5084 -63.6188 -26.1516 REMARK 3 T TENSOR REMARK 3 T11: 0.2740 T22: 0.6281 REMARK 3 T33: 0.4291 T12: -0.0870 REMARK 3 T13: -0.0113 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.9804 L22: 0.1783 REMARK 3 L33: 1.3659 L12: -0.2418 REMARK 3 L13: -1.2131 L23: 0.0591 REMARK 3 S TENSOR REMARK 3 S11: -0.1404 S12: 0.0222 S13: -0.0693 REMARK 3 S21: -0.0294 S22: 0.0662 S23: 0.0101 REMARK 3 S31: -0.0424 S32: -0.0758 S33: -0.0006 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NOO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000239135. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 134.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.28000 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6NON REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M SODIUM THIOCYANATE, 0.1 M MES, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.43300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 120.86600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.43300 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 120.86600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.43300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 120.86600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 60.43300 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 120.86600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 ILE A 252 REMARK 465 LYS A 253 REMARK 465 GLN A 254 REMARK 465 LEU A 255 REMARK 465 VAL A 256 REMARK 465 GLN A 257 REMARK 465 ILE A 258 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 ILE B 252 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 LEU B 255 REMARK 465 VAL B 256 REMARK 465 GLN B 257 REMARK 465 ILE B 258 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A -5 CG1 CG2 REMARK 470 VAL B -5 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 202 CG MET A 202 SD 0.168 REMARK 500 MET B 1 CG MET B 1 SD 0.161 REMARK 500 MET B 202 CG MET B 202 SD 0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A -3 -156.08 -102.39 REMARK 500 SER A 29 35.51 -143.16 REMARK 500 THR A 57 -157.35 -129.54 REMARK 500 LEU A 75 -166.59 -112.01 REMARK 500 ASP A 86 -136.30 -140.48 REMARK 500 ASP A 87 -70.49 -61.01 REMARK 500 MET A 101 31.20 -144.39 REMARK 500 PHE A 187 73.45 -110.95 REMARK 500 ARG B -3 -167.79 -118.96 REMARK 500 MET B 1 130.59 -37.70 REMARK 500 SER B 8 103.88 -171.89 REMARK 500 THR B 57 -163.40 -117.14 REMARK 500 MET B 101 28.92 -140.25 REMARK 500 ALA B 127 147.47 77.94 REMARK 500 TYR B 236 61.79 -116.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 16 OG1 REMARK 620 2 ATP B 501 O1G 127.3 REMARK 620 3 ATP B 501 O2B 83.9 69.9 REMARK 620 4 HOH B 602 O 67.5 60.7 69.3 REMARK 620 5 HOH B 613 O 77.0 95.4 141.1 72.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6NON RELATED DB: PDB REMARK 900 APO MCDA DBREF 6NOO A -19 258 PDB 6NOO 6NOO -19 258 DBREF 6NOO B -19 258 PDB 6NOO 6NOO -19 258 SEQRES 1 A 278 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 278 LEU VAL PRO ARG GLY SER HIS MET LYS THR LEU VAL ILE SEQRES 3 A 278 ALA SER LEU SER GLY GLY GLN GLY LYS THR THR THR ALA SEQRES 4 A 278 PHE PHE LEU GLY LYS LEU LEU SER GLN SER ALA LYS VAL SEQRES 5 A 278 LEU PHE ILE ASP ALA ASP PRO GLN SER ASN LEU THR PHE SEQRES 6 A 278 PHE LEU GLY HIS GLU VAL GLU PRO SER ALA PRO THR LEU SEQRES 7 A 278 LEU GLU LEU ILE LYS ASP MET VAL GLU PRO ALA ASP ALA SEQRES 8 A 278 VAL TYR SER LEU ALA ASN SER ASN GLN PHE LEU ILE PRO SEQRES 9 A 278 SER ASP ASP GLY LEU SER ASN ALA GLN GLU TYR LEU ALA SEQRES 10 A 278 SER SER GLY MET GLY ALA VAL VAL LEU LYS ALA ARG LEU SEQRES 11 A 278 LYS PRO LEU SER GLU TYR PHE ASP TYR CYS ILE ILE ASP SEQRES 12 A 278 SER PRO PRO ALA ARG THR GLN ILE SER ILE ALA THR ILE SEQRES 13 A 278 GLY ALA ALA ASP GLN LEU LEU ILE PRO ALA GLU ALA SER SEQRES 14 A 278 THR LYS GLY VAL ASN SER LEU ILE ARG THR LEU GLU ILE SEQRES 15 A 278 VAL GLN SER LEU GLU LYS LEU GLY ALA PHE THR GLY SER SEQRES 16 A 278 ILE LEU GLY VAL ILE PRO PHE ARG ASP LYS TRP PHE GLY SEQRES 17 A 278 LEU SER GLN SER LYS ASP SER ALA GLY ALA ILE ALA ALA SEQRES 18 A 278 MET LYS GLU VAL ALA PRO GLN LEU ARG ILE PHE PRO SER SEQRES 19 A 278 ILE LEU GLU SER GLU ARG TYR LYS GLN ALA LEU ASN GLN SEQRES 20 A 278 GLY ILE LEU LEU SER GLU LEU GLY TYR PRO ASP LEU GLU SEQRES 21 A 278 LYS PRO PHE GLU GLY VAL LYS GLU ALA LEU GLY ILE LYS SEQRES 22 A 278 GLN LEU VAL GLN ILE SEQRES 1 B 278 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 278 LEU VAL PRO ARG GLY SER HIS MET LYS THR LEU VAL ILE SEQRES 3 B 278 ALA SER LEU SER GLY GLY GLN GLY LYS THR THR THR ALA SEQRES 4 B 278 PHE PHE LEU GLY LYS LEU LEU SER GLN SER ALA LYS VAL SEQRES 5 B 278 LEU PHE ILE ASP ALA ASP PRO GLN SER ASN LEU THR PHE SEQRES 6 B 278 PHE LEU GLY HIS GLU VAL GLU PRO SER ALA PRO THR LEU SEQRES 7 B 278 LEU GLU LEU ILE LYS ASP MET VAL GLU PRO ALA ASP ALA SEQRES 8 B 278 VAL TYR SER LEU ALA ASN SER ASN GLN PHE LEU ILE PRO SEQRES 9 B 278 SER ASP ASP GLY LEU SER ASN ALA GLN GLU TYR LEU ALA SEQRES 10 B 278 SER SER GLY MET GLY ALA VAL VAL LEU LYS ALA ARG LEU SEQRES 11 B 278 LYS PRO LEU SER GLU TYR PHE ASP TYR CYS ILE ILE ASP SEQRES 12 B 278 SER PRO PRO ALA ARG THR GLN ILE SER ILE ALA THR ILE SEQRES 13 B 278 GLY ALA ALA ASP GLN LEU LEU ILE PRO ALA GLU ALA SER SEQRES 14 B 278 THR LYS GLY VAL ASN SER LEU ILE ARG THR LEU GLU ILE SEQRES 15 B 278 VAL GLN SER LEU GLU LYS LEU GLY ALA PHE THR GLY SER SEQRES 16 B 278 ILE LEU GLY VAL ILE PRO PHE ARG ASP LYS TRP PHE GLY SEQRES 17 B 278 LEU SER GLN SER LYS ASP SER ALA GLY ALA ILE ALA ALA SEQRES 18 B 278 MET LYS GLU VAL ALA PRO GLN LEU ARG ILE PHE PRO SER SEQRES 19 B 278 ILE LEU GLU SER GLU ARG TYR LYS GLN ALA LEU ASN GLN SEQRES 20 B 278 GLY ILE LEU LEU SER GLU LEU GLY TYR PRO ASP LEU GLU SEQRES 21 B 278 LYS PRO PHE GLU GLY VAL LYS GLU ALA LEU GLY ILE LYS SEQRES 22 B 278 GLN LEU VAL GLN ILE HET ATP B 501 31 HET MG B 502 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *35(H2 O) HELIX 1 AA1 GLN A 13 SER A 27 1 15 HELIX 2 AA2 SER A 41 LEU A 47 1 7 HELIX 3 AA3 THR A 57 LYS A 63 1 7 HELIX 4 AA4 GLU A 67 VAL A 72 5 6 HELIX 5 AA5 ASP A 86 SER A 90 5 5 HELIX 6 AA6 ASN A 91 SER A 98 1 8 HELIX 7 AA7 MET A 101 LYS A 111 1 11 HELIX 8 AA8 PRO A 112 PHE A 117 5 6 HELIX 9 AA9 THR A 129 ALA A 138 1 10 HELIX 10 AB1 SER A 149 LEU A 169 1 21 HELIX 11 AB2 SER A 192 ALA A 206 1 15 HELIX 12 AB3 GLU A 219 GLY A 228 1 10 HELIX 13 AB4 LEU A 230 GLY A 235 1 6 HELIX 14 AB5 TYR A 236 LEU A 239 5 4 HELIX 15 AB6 GLU A 240 ALA A 249 1 10 HELIX 16 AB7 GLY B 14 SER B 27 1 14 HELIX 17 AB8 SER B 41 LEU B 47 1 7 HELIX 18 AB9 THR B 57 LYS B 63 1 7 HELIX 19 AC1 GLU B 67 VAL B 72 5 6 HELIX 20 AC2 ASP B 86 SER B 90 5 5 HELIX 21 AC3 ASN B 91 GLY B 100 1 10 HELIX 22 AC4 MET B 101 ALA B 103 5 3 HELIX 23 AC5 VAL B 104 LYS B 111 1 8 HELIX 24 AC6 PRO B 112 PHE B 117 5 6 HELIX 25 AC7 THR B 129 ALA B 139 1 11 HELIX 26 AC8 SER B 149 LEU B 169 1 21 HELIX 27 AC9 SER B 192 ALA B 206 1 15 HELIX 28 AD1 GLU B 219 GLN B 227 1 9 HELIX 29 AD2 LEU B 230 GLY B 235 5 6 HELIX 30 AD3 TYR B 236 LEU B 239 5 4 HELIX 31 AD4 GLU B 240 GLY B 251 1 12 SHEET 1 AA1 8 TYR A 73 SER A 74 0 SHEET 2 AA1 8 GLN A 80 ILE A 83 -1 O LEU A 82 N TYR A 73 SHEET 3 AA1 8 VAL A 32 ASP A 36 1 N PHE A 34 O PHE A 81 SHEET 4 AA1 8 TYR A 119 ASP A 123 1 O ILE A 121 N LEU A 33 SHEET 5 AA1 8 LYS A 2 ILE A 6 1 N LEU A 4 O CYS A 120 SHEET 6 AA1 8 GLN A 141 GLU A 147 1 O LEU A 143 N VAL A 5 SHEET 7 AA1 8 SER A 175 ASP A 184 1 O GLY A 178 N ILE A 144 SHEET 8 AA1 8 ILE A 215 LEU A 216 1 O ILE A 215 N PRO A 181 SHEET 1 AA2 2 TRP A 186 PHE A 187 0 SHEET 2 AA2 2 SER A 190 GLN A 191 -1 O SER A 190 N PHE A 187 SHEET 1 AA3 8 TYR B 73 SER B 74 0 SHEET 2 AA3 8 GLN B 80 ILE B 83 -1 O LEU B 82 N TYR B 73 SHEET 3 AA3 8 VAL B 32 ASP B 36 1 N PHE B 34 O PHE B 81 SHEET 4 AA3 8 TYR B 119 ASP B 123 1 O ILE B 121 N LEU B 33 SHEET 5 AA3 8 LYS B 2 ILE B 6 1 N LEU B 4 O CYS B 120 SHEET 6 AA3 8 GLN B 141 GLU B 147 1 O LEU B 143 N VAL B 5 SHEET 7 AA3 8 SER B 175 ASP B 184 1 O PHE B 182 N ALA B 146 SHEET 8 AA3 8 ILE B 215 LEU B 216 1 O ILE B 215 N PRO B 181 SHEET 1 AA4 2 TRP B 186 PHE B 187 0 SHEET 2 AA4 2 SER B 190 GLN B 191 -1 O SER B 190 N PHE B 187 LINK OG1 THR B 16 MG MG B 502 1555 1555 2.38 LINK O1G ATP B 501 MG MG B 502 1555 1555 2.42 LINK O2B ATP B 501 MG MG B 502 1555 1555 2.48 LINK MG MG B 502 O HOH B 602 1555 1555 2.41 LINK MG MG B 502 O HOH B 613 1555 1555 2.60 SITE 1 AC1 20 GLY B 11 GLY B 12 GLN B 13 GLY B 14 SITE 2 AC1 20 LYS B 15 THR B 16 THR B 17 ASP B 38 SITE 3 AC1 20 ASP B 87 PRO B 126 PHE B 182 ARG B 183 SITE 4 AC1 20 ILE B 215 LEU B 216 GLU B 217 SER B 218 SITE 5 AC1 20 TYR B 221 LYS B 222 MG B 502 HOH B 602 SITE 1 AC2 4 THR B 16 ATP B 501 HOH B 602 HOH B 613 CRYST1 154.891 154.891 181.299 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006456 0.003727 0.000000 0.00000 SCALE2 0.000000 0.007455 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005516 0.00000