HEADER ISOMERASE 18-JAN-19 6NPX TITLE XANTHOMONAS CITRI DEPHOSPHO-PGM IN COMPLEX WITH MANNOSE-6-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI (STRAIN 306); SOURCE 3 ORGANISM_TAXID: 190486; SOURCE 4 STRAIN: 306; SOURCE 5 GENE: XANA, XAC3579; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHOGLUCOMUTASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.STIERS,L.J.BEAMER REVDAT 5 11-OCT-23 6NPX 1 HETSYN REVDAT 4 29-JUL-20 6NPX 1 COMPND REMARK HETNAM SITE REVDAT 3 27-NOV-19 6NPX 1 REMARK REVDAT 2 15-MAY-19 6NPX 1 JRNL REVDAT 1 10-APR-19 6NPX 0 JRNL AUTH K.M.STIERS,A.C.GRAHAM,J.S.ZHU,D.L.JAKEMAN,J.C.NIX,L.J.BEAMER JRNL TITL STRUCTURAL AND DYNAMICAL DESCRIPTION OF THE ENZYMATIC JRNL TITL 2 REACTION OF A PHOSPHOHEXOMUTASE. JRNL REF STRUCT DYN. V. 6 24703 2019 JRNL REFN ESSN 2329-7778 JRNL PMID 31041362 JRNL DOI 10.1063/1.5092803 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.2 REMARK 3 NUMBER OF REFLECTIONS : 60790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 3129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3026 - 3.9776 1.00 3618 194 0.1274 0.1666 REMARK 3 2 3.9776 - 3.1576 0.77 2648 141 0.1388 0.1976 REMARK 3 3 3.1576 - 2.7585 1.00 3418 187 0.1619 0.1986 REMARK 3 4 2.7585 - 2.5064 0.75 2541 138 0.1639 0.2516 REMARK 3 5 2.5064 - 2.3267 1.00 3358 181 0.1666 0.1868 REMARK 3 6 2.3267 - 2.1896 0.52 1740 97 0.1733 0.2355 REMARK 3 7 2.1896 - 2.0799 0.99 2595 150 0.1570 0.2138 REMARK 3 8 2.0799 - 1.9894 0.99 1919 95 0.1740 0.2159 REMARK 3 9 1.9894 - 1.9128 0.98 429 24 0.1641 0.2140 REMARK 3 10 1.9128 - 1.8468 0.90 248 10 0.2178 0.2632 REMARK 3 11 1.8468 - 1.7891 1.00 3317 195 0.1640 0.2267 REMARK 3 12 1.7891 - 1.7379 0.99 2355 131 0.1741 0.2736 REMARK 3 13 1.6922 - 1.6509 0.99 3162 165 0.2017 0.2521 REMARK 3 14 1.6509 - 1.6134 1.00 3314 176 0.2067 0.2785 REMARK 3 15 1.6134 - 1.5790 1.00 3317 178 0.2168 0.2748 REMARK 3 16 1.5790 - 1.5474 1.00 3277 194 0.2563 0.2669 REMARK 3 17 1.5474 - 1.5182 0.99 3263 180 0.3379 0.3492 REMARK 3 18 1.5182 - 1.4911 0.98 3309 150 0.4369 0.4872 REMARK 3 19 1.4911 - 1.4658 1.00 3251 194 0.3908 0.3905 REMARK 3 20 1.4658 - 1.4422 1.00 3316 171 0.3694 0.3769 REMARK 3 21 1.4422 - 1.4200 0.99 3266 178 0.3858 0.4355 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3628 REMARK 3 ANGLE : 0.897 4937 REMARK 3 CHIRALITY : 0.080 543 REMARK 3 PLANARITY : 0.008 657 REMARK 3 DIHEDRAL : 18.935 1338 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0429 37.6702 14.7754 REMARK 3 T TENSOR REMARK 3 T11: 0.1505 T22: 0.1341 REMARK 3 T33: 0.1389 T12: 0.0048 REMARK 3 T13: 0.0095 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.6026 L22: 1.1031 REMARK 3 L33: 1.2311 L12: -0.1267 REMARK 3 L13: -0.1189 L23: 0.3766 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: 0.0367 S13: -0.0133 REMARK 3 S21: -0.0843 S22: 0.0279 S23: 0.0592 REMARK 3 S31: 0.0762 S32: -0.0153 S33: -0.0059 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3731 54.0402 30.6701 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.1183 REMARK 3 T33: 0.1162 T12: -0.0011 REMARK 3 T13: 0.0067 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.2786 L22: 0.4484 REMARK 3 L33: 0.6887 L12: -0.0889 REMARK 3 L13: -0.1316 L23: -0.1881 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: -0.0029 S13: 0.0179 REMARK 3 S21: -0.0108 S22: 0.0076 S23: -0.0253 REMARK 3 S31: 0.0234 S32: 0.0507 S33: -0.0147 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 351 THROUGH 448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1565 63.0633 14.0248 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.1257 REMARK 3 T33: 0.1316 T12: 0.0020 REMARK 3 T13: 0.0104 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.4845 L22: 0.5454 REMARK 3 L33: 1.1473 L12: 0.0265 REMARK 3 L13: 0.1863 L23: -0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.0781 S13: -0.0260 REMARK 3 S21: -0.0730 S22: 0.0252 S23: 0.0421 REMARK 3 S31: 0.0480 S32: 0.0105 S33: -0.0190 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000239141. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60987 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 45.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.3 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 2.03400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BMN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 8000, 0.2M MGCL, 0.1M HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.84650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.31250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.16700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.31250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.84650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.16700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 387 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 216 O HOH A 601 2.11 REMARK 500 O HOH A 972 O HOH A 1003 2.12 REMARK 500 O HOH A 621 O HOH A 630 2.15 REMARK 500 O HOH A 697 O HOH A 976 2.15 REMARK 500 O HOH A 612 O HOH A 819 2.18 REMARK 500 OD1 ASP A 127 O HOH A 602 2.18 REMARK 500 O HOH A 1011 O HOH A 1026 2.19 REMARK 500 N MET A 1 O HOH A 603 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 819 O HOH A 927 4565 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 97 -94.61 59.25 REMARK 500 ARG A 110 -149.83 -109.81 REMARK 500 ARG A 110 -150.77 -110.17 REMARK 500 THR A 282 -38.87 -133.30 REMARK 500 SER A 322 20.19 -66.71 REMARK 500 SER A 322 20.19 -67.69 REMARK 500 PHE A 330 47.46 -88.03 REMARK 500 SER A 393 66.34 37.75 REMARK 500 ASP A 400 86.64 -156.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 320 11.84 REMARK 500 GLU A 320 11.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1028 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A1029 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1030 DISTANCE = 6.77 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 97 OG REMARK 620 2 ASP A 237 OD2 88.1 REMARK 620 3 ASP A 239 OD1 88.1 96.7 REMARK 620 4 ASP A 241 OD1 172.3 99.5 92.1 REMARK 620 5 HOH A 623 O 83.5 166.0 94.3 88.8 REMARK 620 6 HOH A 840 O 82.4 87.0 169.6 96.8 80.8 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6NN2 RELATED DB: PDB REMARK 900 RELATED ID: 6NN1 RELATED DB: PDB REMARK 900 RELATED ID: 6NNO RELATED DB: PDB REMARK 900 RELATED ID: 6NNN RELATED DB: PDB REMARK 900 RELATED ID: 6NNS RELATED DB: PDB REMARK 900 RELATED ID: 6NNP RELATED DB: PDB REMARK 900 RELATED ID: 6NOQ RELATED DB: PDB REMARK 900 RELATED ID: 6NOL RELATED DB: PDB REMARK 900 RELATED ID: 6NP8 RELATED DB: PDB REMARK 900 RELATED ID: 6NNU RELATED DB: PDB REMARK 900 RELATED ID: 6NNT RELATED DB: PDB DBREF 6NPX A 1 448 UNP Q8PGN7 Q8PGN7_XANAC 3 450 SEQADV 6NPX MET A -19 UNP Q8PGN7 INITIATING METHIONINE SEQADV 6NPX GLY A -18 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX SER A -17 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX SER A -16 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -15 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -14 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -13 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -12 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -11 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A -10 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX SER A -9 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX SER A -8 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX GLU A -7 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX ASN A -6 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX LEU A -5 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX TYR A -4 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX PHE A -3 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX GLN A -2 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX SER A -1 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NPX HIS A 0 UNP Q8PGN7 EXPRESSION TAG SEQRES 1 A 468 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLU SEQRES 2 A 468 ASN LEU TYR PHE GLN SER HIS MET THR LEU PRO ALA PHE SEQRES 3 A 468 LYS ALA TYR ASP ILE ARG GLY ARG VAL PRO ASP GLU LEU SEQRES 4 A 468 ASN GLU ASP LEU ALA ARG ARG ILE GLY VAL ALA LEU ALA SEQRES 5 A 468 ALA GLN LEU ASP GLN GLY PRO VAL VAL LEU GLY HIS ASP SEQRES 6 A 468 VAL ARG LEU ALA SER PRO ALA LEU GLN GLU ALA LEU SER SEQRES 7 A 468 ALA GLY LEU ARG ALA SER GLY ARG ASP VAL ILE ASP ILE SEQRES 8 A 468 GLY LEU CYS GLY THR GLU GLU VAL TYR PHE GLN THR ASP SEQRES 9 A 468 TYR LEU LYS ALA ALA GLY GLY VAL MET VAL THR ALA SER SEQRES 10 A 468 HIS ASN PRO MET ASP TYR ASN GLY MET LYS LEU VAL ARG SEQRES 11 A 468 GLU GLN ALA ARG PRO ILE SER SER ASP THR GLY LEU PHE SEQRES 12 A 468 ALA ILE ARG ASP THR VAL ALA ALA ASP THR ALA ALA PRO SEQRES 13 A 468 GLY GLU PRO THR ALA SER GLU GLN SER ARG THR ASP LYS SEQRES 14 A 468 THR ALA TYR LEU GLU HIS LEU LEU SER TYR VAL ASP ARG SEQRES 15 A 468 SER THR LEU LYS PRO LEU LYS LEU VAL VAL ASN ALA GLY SEQRES 16 A 468 ASN GLY GLY ALA GLY LEU ILE VAL ASP LEU LEU ALA PRO SEQRES 17 A 468 HIS LEU PRO PHE GLU PHE VAL ARG VAL PHE HIS GLU PRO SEQRES 18 A 468 ASP GLY ASN PHE PRO ASN GLY ILE PRO ASN PRO LEU LEU SEQRES 19 A 468 PRO GLU ASN ARG ASP ALA THR ALA LYS ALA VAL LYS ASP SEQRES 20 A 468 ASN GLY ALA ASP PHE GLY ILE ALA TRP ASP GLY ASP PHE SEQRES 21 A 468 ASP ARG CYS PHE PHE PHE ASP HIS THR GLY ARG PHE ILE SEQRES 22 A 468 GLU GLY TYR TYR LEU VAL GLY LEU LEU ALA GLN ALA ILE SEQRES 23 A 468 LEU ALA LYS GLN PRO GLY GLY LYS VAL VAL HIS ASP PRO SEQRES 24 A 468 ARG LEU THR TRP ASN THR VAL GLU GLN VAL GLU GLU ALA SEQRES 25 A 468 GLY GLY ILE PRO VAL LEU CYS LYS SER GLY HIS ALA PHE SEQRES 26 A 468 ILE LYS GLU LYS MET ARG SER GLU ASN ALA VAL TYR GLY SEQRES 27 A 468 GLY GLU MET SER ALA HIS HIS TYR PHE ARG GLU PHE ALA SEQRES 28 A 468 TYR ALA ASP SER GLY MET ILE PRO TRP LEU LEU ILE ALA SEQRES 29 A 468 GLU LEU VAL SER GLN SER GLY ARG SER LEU ALA ASP LEU SEQRES 30 A 468 VAL GLU ALA ARG MET GLN LYS PHE PRO CYS SER GLY GLU SEQRES 31 A 468 ILE ASN PHE LYS VAL ALA ASP ALA LYS ALA SER VAL ALA SEQRES 32 A 468 ARG VAL MET GLU HIS TYR ALA SER LEU SER PRO GLU LEU SEQRES 33 A 468 ASP TYR THR ASP GLY ILE SER ALA ASP PHE GLY GLN TRP SEQRES 34 A 468 ARG PHE ASN LEU ARG SER SER ASN THR GLU PRO LEU LEU SEQRES 35 A 468 ARG LEU ASN VAL GLU THR ARG GLY ASP ALA ALA LEU LEU SEQRES 36 A 468 GLU THR ARG THR GLN GLU ILE SER ASN LEU LEU ARG GLY HET MG A 501 1 HET PEG A 502 7 HET M6P A 503 16 HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM M6P 6-O-PHOSPHONO-ALPHA-D-MANNOPYRANOSE HETSYN M6P ALPHA-D-MANNOSE-6-PHOSPHATE; 6-O-PHOSPHONO-ALPHA-D- HETSYN 2 M6P MANNOSE; 6-O-PHOSPHONO-D-MANNOSE; 6-O-PHOSPHONO- HETSYN 3 M6P MANNOSE FORMUL 2 MG MG 2+ FORMUL 3 PEG C4 H10 O3 FORMUL 4 M6P C6 H13 O9 P FORMUL 5 HOH *430(H2 O) HELIX 1 AA1 ASN A 20 LEU A 35 1 16 HELIX 2 AA2 ALA A 49 SER A 64 1 16 HELIX 3 AA3 GLY A 75 LEU A 86 1 12 HELIX 4 AA4 ARG A 110 ARG A 114 5 5 HELIX 5 AA5 SER A 117 THR A 120 5 4 HELIX 6 AA6 GLY A 121 ASP A 132 1 12 HELIX 7 AA7 LYS A 149 SER A 158 1 10 HELIX 8 AA8 TYR A 159 VAL A 160 5 2 HELIX 9 AA9 ASP A 161 LEU A 165 5 5 HELIX 10 AB1 GLY A 178 ALA A 187 1 10 HELIX 11 AB2 PRO A 188 LEU A 190 5 3 HELIX 12 AB3 LEU A 214 GLY A 229 1 16 HELIX 13 AB4 GLU A 254 GLN A 270 1 17 HELIX 14 AB5 THR A 282 ALA A 292 1 11 HELIX 15 AB6 GLY A 302 ASN A 314 1 13 HELIX 16 AB7 MET A 337 GLY A 351 1 15 HELIX 17 AB8 SER A 353 PHE A 365 1 13 HELIX 18 AB9 ASP A 377 ALA A 390 1 14 HELIX 19 AC1 SER A 391 SER A 393 5 3 HELIX 20 AC2 ASP A 431 ARG A 447 1 17 SHEET 1 AA1 6 ILE A 11 ARG A 14 0 SHEET 2 AA1 6 TYR A 103 VAL A 109 -1 O MET A 106 N ILE A 11 SHEET 3 AA1 6 GLY A 90 VAL A 94 -1 N GLY A 91 O VAL A 109 SHEET 4 AA1 6 VAL A 40 HIS A 44 1 N GLY A 43 O VAL A 94 SHEET 5 AA1 6 VAL A 68 LEU A 73 1 O ILE A 69 N LEU A 42 SHEET 6 AA1 6 GLU A 143 SER A 145 1 O GLN A 144 N ASP A 70 SHEET 1 AA2 5 GLU A 193 VAL A 197 0 SHEET 2 AA2 5 LYS A 169 ASN A 173 1 N VAL A 172 O VAL A 197 SHEET 3 AA2 5 PHE A 232 TRP A 236 1 O ILE A 234 N ASN A 173 SHEET 4 AA2 5 CYS A 243 PHE A 246 -1 O PHE A 246 N GLY A 233 SHEET 5 AA2 5 PHE A 252 ILE A 253 -1 O ILE A 253 N PHE A 245 SHEET 1 AA3 4 ILE A 295 LEU A 298 0 SHEET 2 AA3 4 LYS A 274 HIS A 277 1 N VAL A 275 O VAL A 297 SHEET 3 AA3 4 TYR A 317 GLY A 319 1 O GLY A 319 N VAL A 276 SHEET 4 AA3 4 HIS A 325 PHE A 327 -1 O TYR A 326 N GLY A 318 SHEET 1 AA4 5 ILE A 371 PHE A 373 0 SHEET 2 AA4 5 LEU A 422 THR A 428 -1 O LEU A 424 N ILE A 371 SHEET 3 AA4 5 TRP A 409 SER A 415 -1 N ARG A 414 O ARG A 423 SHEET 4 AA4 5 ILE A 402 ASP A 405 -1 N ALA A 404 O PHE A 411 SHEET 5 AA4 5 GLU A 395 ASP A 397 -1 N GLU A 395 O ASP A 405 LINK OG SER A 97 MG MG A 501 1555 1555 2.15 LINK OD2 ASP A 237 MG MG A 501 1555 1555 1.98 LINK OD1 ASP A 239 MG MG A 501 1555 1555 2.09 LINK OD1 ASP A 241 MG MG A 501 1555 1555 2.09 LINK MG MG A 501 O HOH A 623 1555 1555 2.09 LINK MG MG A 501 O HOH A 840 1555 1555 2.20 CISPEP 1 VAL A 15 PRO A 16 0 8.33 CRYST1 43.693 54.334 170.625 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022887 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005861 0.00000