HEADER PLANT PROTEIN 30-JAN-19 6NU4 TITLE SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA RALF8 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN RALF-LIKE 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 27-82; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RALFL8, AT1G61563, T25B24; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: T7 PROMOTER; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PE-SUMO(KAN) KEYWDS RAPID ALKALINIZATION FACTOR-8, CYSTEINE-RICH PLANT PEPTIDE, PLANT KEYWDS 2 GROWTH, POLLEN TUBE GENERATION, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.LEE,J.L.MARKLEY,R.O.FREDERICK,H.MIYOSHI,M.TONELLI,G.CORNILESCU, AUTHOR 2 C.CORNILESCU,M.R.SUSSMAN REVDAT 4 14-JUN-23 6NU4 1 REMARK REVDAT 3 27-NOV-19 6NU4 1 REMARK REVDAT 2 29-MAY-19 6NU4 1 JRNL REVDAT 1 08-MAY-19 6NU4 0 JRNL AUTH R.O.FREDERICK,M.HARUTA,M.TONELLI,W.LEE,G.CORNILESCU, JRNL AUTH 2 C.C.CORNILESCU,M.R.SUSSMAN,J.L.MARKLEY JRNL TITL FUNCTION AND SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA JRNL TITL 2 RALF8 PEPTIDE. JRNL REF PROTEIN SCI. V. 28 1115 2019 JRNL REFN ESSN 1469-896X JRNL PMID 31004454 JRNL DOI 10.1002/PRO.3628 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PONDEROSA-C/S REMARK 3 AUTHORS : W. LEE, J.L. STARK, J.L. MARKLEY REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TORSION ANGLE DYNAMICS, SIMULATED REMARK 3 ANNEALING REMARK 4 REMARK 4 6NU4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000239392. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-13C; U-15N] RAPID REMARK 210 ALKALINIZATION FACTOR-8 (RALF8), REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HN(CA)CO; 3D HNCO; REMARK 210 2D 1H-13C HSQC; 3D C(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR, NMRPIPE, SMILE, NMRFAM REMARK 210 -SPARKY, I-PINE, TALOS-N, PECAN, REMARK 210 PONDEROSA-C/S, X-PLOR NIH, AUDANA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 13 48.41 -176.62 REMARK 500 1 ASP A 16 -71.75 -132.94 REMARK 500 1 LEU A 44 -2.33 66.88 REMARK 500 1 CYS A 47 98.82 52.49 REMARK 500 2 ALA A 2 -51.81 75.34 REMARK 500 2 SER A 3 138.89 63.13 REMARK 500 2 ASP A 13 62.36 -175.40 REMARK 500 2 LYS A 32 -76.57 -125.08 REMARK 500 2 GLN A 33 -79.68 15.71 REMARK 500 2 GLU A 50 -60.97 -151.37 REMARK 500 3 SER A 3 -175.68 51.85 REMARK 500 3 ARG A 5 -179.24 48.03 REMARK 500 3 TYR A 6 -54.37 -145.18 REMARK 500 3 ASP A 13 40.56 29.32 REMARK 500 3 VAL A 19 133.80 73.10 REMARK 500 3 LYS A 32 172.79 69.79 REMARK 500 3 GLN A 33 -44.62 -152.90 REMARK 500 3 ARG A 38 -63.63 -91.97 REMARK 500 3 LEU A 44 12.36 57.96 REMARK 500 4 ALA A 11 99.14 60.87 REMARK 500 4 ASP A 13 -57.72 -149.74 REMARK 500 4 ARG A 14 -174.29 45.82 REMARK 500 4 VAL A 19 176.19 44.96 REMARK 500 4 CYS A 47 -73.17 65.48 REMARK 500 4 THR A 51 88.85 -163.28 REMARK 500 5 SER A 3 -172.35 47.43 REMARK 500 5 ILE A 12 -124.87 -139.75 REMARK 500 5 ARG A 14 -89.44 47.89 REMARK 500 5 LYS A 32 166.09 76.40 REMARK 500 5 LEU A 44 -1.26 66.12 REMARK 500 5 GLU A 50 -78.66 82.18 REMARK 500 6 ALA A 11 86.46 59.24 REMARK 500 6 LYS A 30 -170.20 66.27 REMARK 500 6 LYS A 32 179.27 68.08 REMARK 500 6 TYR A 37 -102.27 -105.66 REMARK 500 6 HIS A 48 -59.73 -134.40 REMARK 500 7 ALA A 2 -73.15 -141.50 REMARK 500 7 ILE A 12 -100.98 60.73 REMARK 500 7 LYS A 30 179.59 59.07 REMARK 500 7 ARG A 38 -73.05 -94.77 REMARK 500 7 ARG A 39 142.16 -172.84 REMARK 500 7 LYS A 54 55.21 -146.95 REMARK 500 8 SER A 3 -43.73 -172.54 REMARK 500 8 TYR A 9 155.19 63.04 REMARK 500 8 ALA A 11 90.71 47.65 REMARK 500 8 ASP A 16 -93.89 -98.65 REMARK 500 8 HIS A 17 -98.42 -176.43 REMARK 500 8 LEU A 44 -6.08 67.98 REMARK 500 8 CYS A 47 70.50 58.70 REMARK 500 8 THR A 51 -30.38 -155.80 REMARK 500 REMARK 500 THIS ENTRY HAS 128 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30565 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA RALF8 PEPTIDE DBREF 6NU4 A 1 56 UNP Q1ECR9 RLF8_ARATH 27 82 SEQRES 1 A 56 GLU ALA SER VAL ARG TYR ILE THR TYR PRO ALA ILE ASP SEQRES 2 A 56 ARG GLY ASP HIS ALA VAL HIS CYS ASP LYS ALA HIS PRO SEQRES 3 A 56 ASN THR CYS LYS LYS LYS GLN ALA ASN PRO TYR ARG ARG SEQRES 4 A 56 GLY CYS GLY VAL LEU GLU GLY CYS HIS ARG GLU THR GLY SEQRES 5 A 56 PRO LYS PRO THR SSBOND 1 CYS A 21 CYS A 29 1555 1555 2.03 SSBOND 2 CYS A 41 CYS A 47 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1