HEADER VIRAL PROTEIN/RNA 01-FEB-19 6NUT TITLE EBOLA VIRUS NUCLEOPROTEIN - RNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EBOLA NP,ENP,NUCLEOCAPSID PROTEIN,PROTEIN N; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'); COMPND 8 CHAIN: D; COMPND 9 OTHER_DETAILS: THE POLY-ADENOSINE SEQUENCE WAS MODELED TO REPRESENT COMPND 10 THE MIXED IDENTITY OF NUCLEOTIDE SEQUENCES BOUND TO NUCLEOPROTEIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76); SOURCE 3 ORGANISM_COMMON: ZEBOV; SOURCE 4 ORGANISM_TAXID: 128952; SOURCE 5 STRAIN: MAYINGA-76; SOURCE 6 GENE: NP; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PDISPLAY; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 CELL_LINE: 293F KEYWDS RNA-BINDING, NUCLEOPROTEIN, NUCLEOCAPSID, CAPSID, VIRAL PROTEIN-RNA KEYWDS 2 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR R.N.KIRCHDOERFER,A.B.WARD REVDAT 5 20-MAR-24 6NUT 1 REMARK REVDAT 4 18-DEC-19 6NUT 1 REMARK REVDAT 3 13-NOV-19 6NUT 1 JRNL REVDAT 2 08-MAY-19 6NUT 1 JRNL REVDAT 1 01-MAY-19 6NUT 0 JRNL AUTH R.N.KIRCHDOERFER,E.O.SAPHIRE,A.B.WARD JRNL TITL CRYO-EM STRUCTURE OF THE EBOLA VIRUS NUCLEOPROTEIN-RNA JRNL TITL 2 COMPLEX. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 75 340 2019 JRNL REFN ESSN 2053-230X JRNL PMID 31045563 JRNL DOI 10.1107/S2053230X19004424 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, LEGINON, GCTF, COOT, ROSETTA, REMARK 3 PHENIX, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 4ZTG REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 24609 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6NUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239460. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : EBOLA VIRUS NUCLEOPROTEIN BOUND REMARK 245 TO RNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 3.80 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 731 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4970.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : 47478 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = -14.71 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 2.84 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.992631 0.121176 0.000000 -23.57120 REMARK 350 BIOMT2 2 -0.121176 0.992631 0.000000 26.62370 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -68.16000 REMARK 350 BIOMT1 3 0.929326 0.369260 0.000000 -61.84170 REMARK 350 BIOMT2 3 -0.369260 0.929326 0.000000 91.11700 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -65.32000 REMARK 350 BIOMT1 4 0.805101 0.593138 0.000000 -82.48120 REMARK 350 BIOMT2 4 -0.593138 0.805101 0.000000 163.21400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -62.48000 REMARK 350 BIOMT1 5 0.628099 0.778134 0.000000 -84.13680 REMARK 350 BIOMT2 5 -0.778134 0.628099 0.000000 238.18900 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -59.64000 REMARK 350 BIOMT1 6 0.409923 0.912120 0.000000 -66.70000 REMARK 350 BIOMT2 6 -0.912120 0.409923 0.000000 311.12800 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -56.80000 REMARK 350 BIOMT1 7 0.164875 0.986314 0.000000 -31.31370 REMARK 350 BIOMT2 7 -0.986314 0.164875 0.000000 377.24700 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 -53.96000 REMARK 350 BIOMT1 8 -0.090980 0.995853 0.000000 19.70230 REMARK 350 BIOMT2 8 -0.995853 -0.090980 0.000000 432.21400 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 -51.12000 REMARK 350 BIOMT1 9 -0.340872 0.940110 0.000000 83.00380 REMARK 350 BIOMT2 9 -0.940110 -0.340872 0.000000 472.42500 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 -48.28000 REMARK 350 BIOMT1 10 -0.568418 0.822740 0.000000 154.44100 REMARK 350 BIOMT2 10 -0.822740 -0.568418 0.000000 495.24500 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 -45.44000 REMARK 350 BIOMT1 11 -0.758703 0.651437 0.000000 229.33200 REMARK 350 BIOMT2 11 -0.651437 -0.758703 0.000000 499.17600 REMARK 350 BIOMT3 11 0.000000 0.000000 1.000000 -42.60000 REMARK 350 BIOMT1 12 -0.899253 0.437430 0.000000 302.76500 REMARK 350 BIOMT2 12 -0.437430 -0.899253 0.000000 483.96200 REMARK 350 BIOMT3 12 0.000000 0.000000 1.000000 -39.76000 REMARK 350 BIOMT1 13 -0.980853 0.194748 0.000000 369.92900 REMARK 350 BIOMT2 13 -0.194748 -0.980853 0.000000 450.60000 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 -36.92000 REMARK 350 BIOMT1 14 -0.998156 -0.060700 0.000000 426.42000 REMARK 350 BIOMT2 14 0.060700 -0.998156 0.000000 401.27600 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 -34.08000 REMARK 350 BIOMT1 15 -0.950027 -0.312169 0.000000 468.53500 REMARK 350 BIOMT2 15 0.312169 -0.950027 0.000000 339.22500 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 -31.24000 REMARK 350 BIOMT1 16 -0.839620 -0.543174 0.000000 493.51200 REMARK 350 BIOMT2 16 0.543174 -0.839620 0.000000 268.51300 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 -28.40000 REMARK 350 BIOMT1 17 -0.674173 -0.738573 0.000000 499.71600 REMARK 350 BIOMT2 17 0.738573 -0.674173 0.000000 193.77700 REMARK 350 BIOMT3 17 0.000000 0.000000 1.000000 -25.56000 REMARK 350 BIOMT1 18 -0.464533 -0.885556 0.000000 486.73900 REMARK 350 BIOMT2 18 0.885556 -0.464533 0.000000 119.91500 REMARK 350 BIOMT3 18 0.000000 0.000000 1.000000 -22.72000 REMARK 350 BIOMT1 19 -0.224441 -0.974488 0.000000 455.43100 REMARK 350 BIOMT2 19 0.974488 -0.224441 0.000000 51.76900 REMARK 350 BIOMT3 19 0.000000 0.000000 1.000000 -19.88000 REMARK 350 BIOMT1 20 0.030364 -0.999539 0.000000 407.84600 REMARK 350 BIOMT2 20 0.999539 0.030364 0.000000 -6.19335 REMARK 350 BIOMT3 20 0.000000 0.000000 1.000000 -17.04000 REMARK 350 BIOMT1 21 0.283179 -0.959067 0.000000 347.10200 REMARK 350 BIOMT2 21 0.959067 0.283179 0.000000 -50.17270 REMARK 350 BIOMT3 21 0.000000 0.000000 1.000000 -14.20000 REMARK 350 BIOMT1 22 0.517430 -0.855726 0.000000 277.18100 REMARK 350 BIOMT2 22 0.855726 0.517430 0.000000 -77.28610 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 -11.36000 REMARK 350 BIOMT1 23 0.717762 -0.696289 0.000000 202.66800 REMARK 350 BIOMT2 23 0.696289 0.717762 0.000000 -85.75610 REMARK 350 BIOMT3 23 0.000000 0.000000 1.000000 -8.52000 REMARK 350 BIOMT1 24 0.871042 -0.491208 0.000000 128.44600 REMARK 350 BIOMT2 24 0.491208 0.871042 0.000000 -75.02750 REMARK 350 BIOMT3 24 0.000000 0.000000 1.000000 -5.68000 REMARK 350 BIOMT1 25 0.967223 -0.253927 0.000000 59.38060 REMARK 350 BIOMT2 25 0.253927 0.967223 0.000000 -45.80350 REMARK 350 BIOMT3 25 0.000000 0.000000 1.000000 -2.84000 REMARK 350 BIOMT1 26 0.967223 0.253927 0.000000 -45.80350 REMARK 350 BIOMT2 26 -0.253927 0.967223 0.000000 59.38060 REMARK 350 BIOMT3 26 0.000000 0.000000 1.000000 2.84000 REMARK 350 BIOMT1 27 0.871042 0.491208 0.000000 -75.02750 REMARK 350 BIOMT2 27 -0.491208 0.871042 0.000000 128.44600 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 5.68000 REMARK 350 BIOMT1 28 0.717762 0.696289 0.000000 -85.75610 REMARK 350 BIOMT2 28 -0.696289 0.717762 0.000000 202.66800 REMARK 350 BIOMT3 28 0.000000 0.000000 1.000000 8.52000 REMARK 350 BIOMT1 29 0.517430 0.855726 0.000000 -77.28610 REMARK 350 BIOMT2 29 -0.855726 0.517430 0.000000 277.18100 REMARK 350 BIOMT3 29 0.000000 0.000000 1.000000 11.36000 REMARK 350 BIOMT1 30 0.283179 0.959067 0.000000 -50.17270 REMARK 350 BIOMT2 30 -0.959067 0.283179 0.000000 347.10200 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 14.20000 REMARK 350 BIOMT1 31 0.030364 0.999539 0.000000 -6.19335 REMARK 350 BIOMT2 31 -0.999539 0.030364 0.000000 407.84600 REMARK 350 BIOMT3 31 0.000000 0.000000 1.000000 17.04000 REMARK 350 BIOMT1 32 -0.224441 0.974488 0.000000 51.76900 REMARK 350 BIOMT2 32 -0.974488 -0.224441 0.000000 455.43100 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 19.88000 REMARK 350 BIOMT1 33 -0.464533 0.885556 0.000000 119.91500 REMARK 350 BIOMT2 33 -0.885556 -0.464533 0.000000 486.73900 REMARK 350 BIOMT3 33 0.000000 0.000000 1.000000 22.72000 REMARK 350 BIOMT1 34 -0.674173 0.738573 0.000000 193.77700 REMARK 350 BIOMT2 34 -0.738573 -0.674173 0.000000 499.71600 REMARK 350 BIOMT3 34 0.000000 0.000000 1.000000 25.56000 REMARK 350 BIOMT1 35 -0.839620 0.543174 0.000000 268.51300 REMARK 350 BIOMT2 35 -0.543174 -0.839620 0.000000 493.51200 REMARK 350 BIOMT3 35 0.000000 0.000000 1.000000 28.40000 REMARK 350 BIOMT1 36 -0.950027 0.312169 0.000000 339.22500 REMARK 350 BIOMT2 36 -0.312169 -0.950027 0.000000 468.53500 REMARK 350 BIOMT3 36 0.000000 0.000000 1.000000 31.24000 REMARK 350 BIOMT1 37 -0.998156 0.060700 0.000000 401.27600 REMARK 350 BIOMT2 37 -0.060700 -0.998156 0.000000 426.42000 REMARK 350 BIOMT3 37 0.000000 0.000000 1.000000 34.08000 REMARK 350 BIOMT1 38 -0.980853 -0.194748 0.000000 450.60000 REMARK 350 BIOMT2 38 0.194748 -0.980853 0.000000 369.92900 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 36.92000 REMARK 350 BIOMT1 39 -0.899253 -0.437430 0.000000 483.96200 REMARK 350 BIOMT2 39 0.437430 -0.899253 0.000000 302.76500 REMARK 350 BIOMT3 39 0.000000 0.000000 1.000000 39.76000 REMARK 350 BIOMT1 40 -0.758703 -0.651437 0.000000 499.17600 REMARK 350 BIOMT2 40 0.651437 -0.758703 0.000000 229.33200 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 42.60000 REMARK 350 BIOMT1 41 -0.568418 -0.822740 0.000000 495.24500 REMARK 350 BIOMT2 41 0.822740 -0.568418 0.000000 154.44100 REMARK 350 BIOMT3 41 0.000000 0.000000 1.000000 45.44000 REMARK 350 BIOMT1 42 -0.340872 -0.940110 0.000000 472.42500 REMARK 350 BIOMT2 42 0.940110 -0.340872 0.000000 83.00380 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 48.28000 REMARK 350 BIOMT1 43 -0.090980 -0.995853 0.000000 432.21400 REMARK 350 BIOMT2 43 0.995853 -0.090980 0.000000 19.70230 REMARK 350 BIOMT3 43 0.000000 0.000000 1.000000 51.12000 REMARK 350 BIOMT1 44 0.164875 -0.986314 0.000000 377.24700 REMARK 350 BIOMT2 44 0.986314 0.164875 0.000000 -31.31370 REMARK 350 BIOMT3 44 0.000000 0.000000 1.000000 53.96000 REMARK 350 BIOMT1 45 0.409923 -0.912120 0.000000 311.12800 REMARK 350 BIOMT2 45 0.912120 0.409923 0.000000 -66.70000 REMARK 350 BIOMT3 45 0.000000 0.000000 1.000000 56.80000 REMARK 350 BIOMT1 46 0.628099 -0.778134 0.000000 238.18900 REMARK 350 BIOMT2 46 0.778134 0.628099 0.000000 -84.13680 REMARK 350 BIOMT3 46 0.000000 0.000000 1.000000 59.64000 REMARK 350 BIOMT1 47 0.805101 -0.593138 0.000000 163.21400 REMARK 350 BIOMT2 47 0.593138 0.805101 0.000000 -82.48120 REMARK 350 BIOMT3 47 0.000000 0.000000 1.000000 62.48000 REMARK 350 BIOMT1 48 0.929326 -0.369260 0.000000 91.11700 REMARK 350 BIOMT2 48 0.369260 0.929326 0.000000 -61.84170 REMARK 350 BIOMT3 48 0.000000 0.000000 1.000000 65.32000 REMARK 350 BIOMT1 49 0.992631 -0.121176 0.000000 26.62370 REMARK 350 BIOMT2 49 0.121176 0.992631 0.000000 -23.57120 REMARK 350 BIOMT3 49 0.000000 0.000000 1.000000 68.16000 REMARK 350 BIOMT1 50 0.990866 0.134851 0.000000 -26.03780 REMARK 350 BIOMT2 50 -0.134851 0.990866 0.000000 29.82150 REMARK 350 BIOMT3 50 0.000000 0.000000 1.000000 71.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 ARG A 4 REMARK 465 PRO A 5 REMARK 465 GLN A 6 REMARK 465 LYS A 7 REMARK 465 ILE A 8 REMARK 465 TRP A 9 REMARK 465 MET A 10 REMARK 465 ALA A 11 REMARK 465 PRO A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 SER A 17 REMARK 465 ASP A 18 REMARK 465 MET A 19 REMARK 465 ALA A 123 REMARK 465 VAL A 124 REMARK 465 SER A 125 REMARK 465 SER A 126 REMARK 465 PRO A 138 REMARK 465 GLU A 139 REMARK 465 GLU A 140 REMARK 465 GLU A 141 REMARK 465 GLU A 407 REMARK 465 ALA A 408 REMARK 465 ILE A 409 REMARK 465 THR A 410 REMARK 465 ALA A 411 REMARK 465 ALA A 412 REMARK 465 SER A 413 REMARK 465 LEU A 414 REMARK 465 PRO A 415 REMARK 465 LYS A 416 REMARK 465 THR A 417 REMARK 465 SER A 418 REMARK 465 GLY A 419 REMARK 465 HIS A 420 REMARK 465 TYR A 421 REMARK 465 ASP A 422 REMARK 465 ASP A 423 REMARK 465 ASP A 424 REMARK 465 ASP A 425 REMARK 465 ASP A 426 REMARK 465 ILE A 427 REMARK 465 PRO A 428 REMARK 465 PHE A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 PRO A 432 REMARK 465 ILE A 433 REMARK 465 ASN A 434 REMARK 465 ASP A 435 REMARK 465 ASP A 436 REMARK 465 ASP A 437 REMARK 465 ASN A 438 REMARK 465 PRO A 439 REMARK 465 GLY A 440 REMARK 465 HIS A 441 REMARK 465 GLN A 442 REMARK 465 ASP A 443 REMARK 465 ASP A 444 REMARK 465 ASP A 445 REMARK 465 PRO A 446 REMARK 465 THR A 447 REMARK 465 ASP A 448 REMARK 465 SER A 449 REMARK 465 GLN A 450 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 351 CD GLU A 351 OE1 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 21 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 116 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 67 -122.85 47.48 REMARK 500 ASP A 369 -114.75 50.51 REMARK 500 ASP A 370 -59.42 -138.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0522 RELATED DB: EMDB DBREF 6NUT A 1 450 UNP P18272 NCAP_EBOZM 1 450 DBREF 6NUT D 1001 1006 PDB 6NUT 6NUT 1001 1006 SEQRES 1 A 450 MET ASP SER ARG PRO GLN LYS ILE TRP MET ALA PRO SER SEQRES 2 A 450 LEU THR GLU SER ASP MET ASP TYR HIS LYS ILE LEU THR SEQRES 3 A 450 ALA GLY LEU SER VAL GLN GLN GLY ILE VAL ARG GLN ARG SEQRES 4 A 450 VAL ILE PRO VAL TYR GLN VAL ASN ASN LEU GLU GLU ILE SEQRES 5 A 450 CYS GLN LEU ILE ILE GLN ALA PHE GLU ALA GLY VAL ASP SEQRES 6 A 450 PHE GLN GLU SER ALA ASP SER PHE LEU LEU MET LEU CYS SEQRES 7 A 450 LEU HIS HIS ALA TYR GLN GLY ASP TYR LYS LEU PHE LEU SEQRES 8 A 450 GLU SER GLY ALA VAL LYS TYR LEU GLU GLY HIS GLY PHE SEQRES 9 A 450 ARG PHE GLU VAL LYS LYS ARG ASP GLY VAL LYS ARG LEU SEQRES 10 A 450 GLU GLU LEU LEU PRO ALA VAL SER SER GLY LYS ASN ILE SEQRES 11 A 450 LYS ARG THR LEU ALA ALA MET PRO GLU GLU GLU THR THR SEQRES 12 A 450 GLU ALA ASN ALA GLY GLN PHE LEU SER PHE ALA SER LEU SEQRES 13 A 450 PHE LEU PRO LYS LEU VAL VAL GLY GLU LYS ALA CYS LEU SEQRES 14 A 450 GLU LYS VAL GLN ARG GLN ILE GLN VAL HIS ALA GLU GLN SEQRES 15 A 450 GLY LEU ILE GLN TYR PRO THR ALA TRP GLN SER VAL GLY SEQRES 16 A 450 HIS MET MET VAL ILE PHE ARG LEU MET ARG THR ASN PHE SEQRES 17 A 450 LEU ILE LYS PHE LEU LEU ILE HIS GLN GLY MET HIS MET SEQRES 18 A 450 VAL ALA GLY HIS ASP ALA ASN ASP ALA VAL ILE SER ASN SEQRES 19 A 450 SER VAL ALA GLN ALA ARG PHE SER GLY LEU LEU ILE VAL SEQRES 20 A 450 LYS THR VAL LEU ASP HIS ILE LEU GLN LYS THR GLU ARG SEQRES 21 A 450 GLY VAL ARG LEU HIS PRO LEU ALA ARG THR ALA LYS VAL SEQRES 22 A 450 LYS ASN GLU VAL ASN SER PHE LYS ALA ALA LEU SER SER SEQRES 23 A 450 LEU ALA LYS HIS GLY GLU TYR ALA PRO PHE ALA ARG LEU SEQRES 24 A 450 LEU ASN LEU SER GLY VAL ASN ASN LEU GLU HIS GLY LEU SEQRES 25 A 450 PHE PRO GLN LEU SER ALA ILE ALA LEU GLY VAL ALA THR SEQRES 26 A 450 ALA HIS GLY SER THR LEU ALA GLY VAL ASN VAL GLY GLU SEQRES 27 A 450 GLN TYR GLN GLN LEU ARG GLU ALA ALA THR GLU ALA GLU SEQRES 28 A 450 LYS GLN LEU GLN GLN TYR ALA GLU SER ARG GLU LEU ASP SEQRES 29 A 450 HIS LEU GLY LEU ASP ASP GLN GLU LYS LYS ILE LEU MET SEQRES 30 A 450 ASN PHE HIS GLN LYS LYS ASN GLU ILE SER PHE GLN GLN SEQRES 31 A 450 THR ASN ALA MET VAL THR LEU ARG LYS GLU ARG LEU ALA SEQRES 32 A 450 LYS LEU THR GLU ALA ILE THR ALA ALA SER LEU PRO LYS SEQRES 33 A 450 THR SER GLY HIS TYR ASP ASP ASP ASP ASP ILE PRO PHE SEQRES 34 A 450 PRO GLY PRO ILE ASN ASP ASP ASP ASN PRO GLY HIS GLN SEQRES 35 A 450 ASP ASP ASP PRO THR ASP SER GLN SEQRES 1 D 6 A A A A A A HELIX 1 AA1 HIS A 22 ALA A 27 5 6 HELIX 2 AA2 ASN A 48 ALA A 62 1 15 HELIX 3 AA3 PHE A 66 GLU A 68 5 3 HELIX 4 AA4 SER A 69 GLN A 84 1 16 HELIX 5 AA5 ASP A 86 LEU A 91 1 6 HELIX 6 AA6 SER A 93 GLY A 101 1 9 HELIX 7 AA7 ARG A 116 LEU A 120 5 5 HELIX 8 AA8 LYS A 128 ALA A 136 1 9 HELIX 9 AA9 ASN A 146 LEU A 156 1 11 HELIX 10 AB1 LYS A 160 VAL A 163 5 4 HELIX 11 AB2 GLY A 164 GLN A 182 1 19 HELIX 12 AB3 PRO A 188 GLN A 192 5 5 HELIX 13 AB4 SER A 193 ASN A 207 1 15 HELIX 14 AB5 ASN A 207 MET A 221 1 15 HELIX 15 AB6 ASP A 226 GLN A 238 1 13 HELIX 16 AB7 LEU A 245 ILE A 254 1 10 HELIX 17 AB8 PRO A 266 ARG A 269 5 4 HELIX 18 AB9 THR A 270 ALA A 288 1 19 HELIX 19 AC1 LYS A 289 ALA A 297 5 9 HELIX 20 AC2 GLY A 304 LEU A 308 5 5 HELIX 21 AC3 GLU A 309 LEU A 312 5 4 HELIX 22 AC4 PHE A 313 THR A 325 1 13 HELIX 23 AC5 THR A 330 VAL A 334 5 5 HELIX 24 AC6 GLY A 337 LEU A 363 1 27 HELIX 25 AC7 ASP A 364 LEU A 366 5 3 HELIX 26 AC8 ASP A 370 THR A 406 1 37 SHEET 1 AA1 2 ARG A 39 TYR A 44 0 SHEET 2 AA1 2 PHE A 104 LYS A 109 1 O ARG A 105 N ILE A 41 SHEET 1 AA2 2 LEU A 255 THR A 258 0 SHEET 2 AA2 2 GLY A 261 LEU A 264 -1 O ARG A 263 N GLN A 256 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000