HEADER TRANSFERASE 05-FEB-19 6NVR TITLE CRYSTAL STRUCTURE OF TRMD, A TRNA-(N1G37) METHYLTRANSFERASE, FROM TITLE 2 MYCOBACTERIUM ABSCESSUS IN APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: M1G-METHYLTRANSFERASE,TRNA [GM37] METHYLTRANSFERASE; COMPND 5 EC: 2.1.1.228; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTEROIDES ABSCESSUS; SOURCE 3 ORGANISM_TAXID: 36809; SOURCE 4 ATCC: 19977; SOURCE 5 GENE: TRMD, DDJ36_03475; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRMD, TRNA METHYLTRANSFERASE, SPOUT METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.E.THOMAS,A.J.WHITEHOUSE,A.G.COYNE,C.ABELL,V.M.MENDES,T.L.BLUNDELL REVDAT 4 24-JAN-24 6NVR 1 REMARK REVDAT 3 26-AUG-20 6NVR 1 JRNL REVDAT 2 05-AUG-20 6NVR 1 JRNL REVDAT 1 19-FEB-20 6NVR 0 JRNL AUTH S.E.THOMAS,A.J.WHITEHOUSE,K.BROWN,S.BURBAUD, JRNL AUTH 2 J.M.BELARDINELLI,J.SANGEN,R.LAHIRI,M.D.J.LIBARDO,P.GUPTA, JRNL AUTH 3 S.MALHOTRA,H.I.M.BOSHOFF,M.JACKSON,C.ABELL,A.G.COYNE, JRNL AUTH 4 T.L.BLUNDELL,R.A.FLOTO,V.MENDES JRNL TITL FRAGMENT-BASED DISCOVERY OF A NEW CLASS OF INHIBITORS JRNL TITL 2 TARGETING MYCOBACTERIAL TRNA MODIFICATION. JRNL REF NUCLEIC ACIDS RES. V. 48 8099 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32602532 JRNL DOI 10.1093/NAR/GKAA539 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 72159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 3548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.3435 - 4.5663 1.00 2963 151 0.1680 0.1725 REMARK 3 2 4.5663 - 3.6246 1.00 2786 177 0.1494 0.1450 REMARK 3 3 3.6246 - 3.1665 1.00 2767 159 0.1807 0.1947 REMARK 3 4 3.1665 - 2.8770 1.00 2786 145 0.1990 0.2198 REMARK 3 5 2.8770 - 2.6707 1.00 2743 172 0.2002 0.2179 REMARK 3 6 2.6707 - 2.5133 1.00 2749 148 0.1918 0.2316 REMARK 3 7 2.5133 - 2.3874 1.00 2770 110 0.1895 0.2075 REMARK 3 8 2.3874 - 2.2835 1.00 2759 137 0.1836 0.2021 REMARK 3 9 2.2835 - 2.1956 1.00 2740 140 0.1872 0.1932 REMARK 3 10 2.1956 - 2.1198 1.00 2738 133 0.1817 0.2213 REMARK 3 11 2.1198 - 2.0535 1.00 2727 139 0.1861 0.1982 REMARK 3 12 2.0535 - 1.9948 1.00 2707 169 0.1836 0.2193 REMARK 3 13 1.9948 - 1.9423 1.00 2720 143 0.1792 0.1950 REMARK 3 14 1.9423 - 1.8949 1.00 2708 138 0.1823 0.2309 REMARK 3 15 1.8949 - 1.8518 1.00 2754 159 0.1821 0.2347 REMARK 3 16 1.8518 - 1.8124 1.00 2721 140 0.1945 0.2113 REMARK 3 17 1.8124 - 1.7762 1.00 2696 127 0.1939 0.2038 REMARK 3 18 1.7762 - 1.7426 1.00 2716 146 0.1973 0.2511 REMARK 3 19 1.7426 - 1.7115 1.00 2698 145 0.2018 0.2372 REMARK 3 20 1.7115 - 1.6825 1.00 2746 121 0.2006 0.2104 REMARK 3 21 1.6825 - 1.6554 1.00 2735 127 0.1985 0.2278 REMARK 3 22 1.6554 - 1.6299 1.00 2715 133 0.2087 0.2101 REMARK 3 23 1.6299 - 1.6059 1.00 2720 124 0.2176 0.2544 REMARK 3 24 1.6059 - 1.5833 1.00 2683 144 0.2370 0.2605 REMARK 3 25 1.5833 - 1.5619 1.00 2764 121 0.2466 0.2851 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3443 REMARK 3 ANGLE : 1.027 4721 REMARK 3 CHIRALITY : 0.042 536 REMARK 3 PLANARITY : 0.006 614 REMARK 3 DIHEDRAL : 11.685 1270 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.2082 -13.2617 22.7664 REMARK 3 T TENSOR REMARK 3 T11: 0.3213 T22: 0.4458 REMARK 3 T33: 0.3069 T12: 0.0034 REMARK 3 T13: -0.0205 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 0.0883 L22: 0.0679 REMARK 3 L33: 0.2369 L12: -0.0659 REMARK 3 L13: -0.0042 L23: -0.1094 REMARK 3 S TENSOR REMARK 3 S11: -0.0446 S12: -0.6577 S13: 0.1243 REMARK 3 S21: 0.2601 S22: -0.0252 S23: -0.1362 REMARK 3 S31: -0.1064 S32: -0.3757 S33: -0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9338 -18.8509 14.3374 REMARK 3 T TENSOR REMARK 3 T11: 0.2474 T22: 0.3135 REMARK 3 T33: 0.2697 T12: -0.0222 REMARK 3 T13: -0.0009 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.7171 L22: 0.6072 REMARK 3 L33: 1.0944 L12: 0.0091 REMARK 3 L13: 0.1386 L23: -0.5716 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: -0.2390 S13: -0.0411 REMARK 3 S21: 0.2254 S22: 0.1256 S23: 0.0120 REMARK 3 S31: 0.2066 S32: -0.0610 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3190 -10.4236 11.0677 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.2057 REMARK 3 T33: 0.2446 T12: 0.0086 REMARK 3 T13: 0.0000 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 1.9051 L22: 0.1157 REMARK 3 L33: 1.4568 L12: 0.2281 REMARK 3 L13: 0.7543 L23: -0.0734 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: -0.0162 S13: 0.1299 REMARK 3 S21: 0.0562 S22: 0.0295 S23: 0.0027 REMARK 3 S31: -0.0638 S32: -0.0220 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2199 0.8255 26.5516 REMARK 3 T TENSOR REMARK 3 T11: 0.5296 T22: 0.5109 REMARK 3 T33: 0.5281 T12: 0.0139 REMARK 3 T13: 0.1202 T23: -0.1766 REMARK 3 L TENSOR REMARK 3 L11: 0.1368 L22: 0.0977 REMARK 3 L33: 0.1615 L12: 0.0131 REMARK 3 L13: -0.0170 L23: -0.1205 REMARK 3 S TENSOR REMARK 3 S11: -0.1058 S12: -0.5617 S13: 0.1015 REMARK 3 S21: 0.4095 S22: -0.3137 S23: 0.4105 REMARK 3 S31: -0.3300 S32: -0.0534 S33: -0.0298 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7245 -4.3640 36.1894 REMARK 3 T TENSOR REMARK 3 T11: 0.3408 T22: 0.2667 REMARK 3 T33: 0.2272 T12: 0.0177 REMARK 3 T13: -0.0167 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 0.0171 L22: 0.0995 REMARK 3 L33: 0.0550 L12: -0.0340 REMARK 3 L13: -0.0366 L23: 0.0927 REMARK 3 S TENSOR REMARK 3 S11: -0.1568 S12: -0.0917 S13: -0.0035 REMARK 3 S21: 0.1841 S22: -0.1031 S23: -0.1027 REMARK 3 S31: -0.1944 S32: -0.1542 S33: 0.0003 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7745 -2.7598 30.3060 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.2761 REMARK 3 T33: 0.2626 T12: 0.0003 REMARK 3 T13: -0.0090 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.6990 L22: 0.4274 REMARK 3 L33: 0.0373 L12: -0.0464 REMARK 3 L13: -0.0793 L23: 0.1138 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: 0.0895 S13: -0.0994 REMARK 3 S21: 0.0584 S22: 0.1312 S23: -0.3061 REMARK 3 S31: 0.0856 S32: 0.2294 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6002 -17.9974 36.0323 REMARK 3 T TENSOR REMARK 3 T11: 0.3228 T22: 0.3000 REMARK 3 T33: 0.2452 T12: -0.0362 REMARK 3 T13: 0.0090 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 1.2109 L22: 0.8870 REMARK 3 L33: 0.8756 L12: -0.8411 REMARK 3 L13: -0.0205 L23: -0.0472 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.1594 S13: -0.1193 REMARK 3 S21: 0.1915 S22: -0.1474 S23: 0.4034 REMARK 3 S31: 0.1490 S32: -0.2766 S33: -0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7237 -19.5453 30.5343 REMARK 3 T TENSOR REMARK 3 T11: 0.2935 T22: 0.2139 REMARK 3 T33: 0.2361 T12: 0.0187 REMARK 3 T13: -0.0279 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.8543 L22: 0.7452 REMARK 3 L33: 0.7307 L12: 0.3306 REMARK 3 L13: 0.3908 L23: 0.4275 REMARK 3 S TENSOR REMARK 3 S11: 0.0775 S12: -0.0335 S13: -0.1699 REMARK 3 S21: 0.1402 S22: 0.0525 S23: -0.0936 REMARK 3 S31: 0.0821 S32: 0.0315 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 132 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8670 -20.4749 12.6292 REMARK 3 T TENSOR REMARK 3 T11: 0.1937 T22: 0.2014 REMARK 3 T33: 0.2289 T12: -0.0112 REMARK 3 T13: 0.0207 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 0.9337 L22: 0.8900 REMARK 3 L33: 0.4093 L12: -0.3574 REMARK 3 L13: 0.1178 L23: -0.1355 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: 0.1037 S13: -0.1148 REMARK 3 S21: 0.0773 S22: 0.0416 S23: -0.0470 REMARK 3 S31: 0.0522 S32: 0.0717 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1430 -21.7868 -7.2732 REMARK 3 T TENSOR REMARK 3 T11: 0.2569 T22: 0.4979 REMARK 3 T33: 0.3491 T12: -0.0151 REMARK 3 T13: 0.0592 T23: -0.1498 REMARK 3 L TENSOR REMARK 3 L11: 0.3719 L22: 0.7417 REMARK 3 L33: 0.3503 L12: 0.1588 REMARK 3 L13: 0.3238 L23: -0.4494 REMARK 3 S TENSOR REMARK 3 S11: -0.0942 S12: 0.3687 S13: -0.3612 REMARK 3 S21: -0.3745 S22: 0.2232 S23: -0.3118 REMARK 3 S31: -0.0981 S32: 0.2266 S33: -0.0006 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 223 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0929 -9.9220 1.4777 REMARK 3 T TENSOR REMARK 3 T11: 0.2636 T22: 0.3271 REMARK 3 T33: 0.3988 T12: 0.0270 REMARK 3 T13: 0.0483 T23: -0.0579 REMARK 3 L TENSOR REMARK 3 L11: 0.0666 L22: 0.0156 REMARK 3 L33: 0.0140 L12: 0.0099 REMARK 3 L13: 0.0426 L23: -0.0108 REMARK 3 S TENSOR REMARK 3 S11: 0.1899 S12: -0.2080 S13: 0.8350 REMARK 3 S21: -0.0188 S22: 0.0169 S23: -0.3141 REMARK 3 S31: -0.3068 S32: -0.4858 S33: -0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NVR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.12 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72241 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 86.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.72900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: 3QUV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 MM SODIUM CACODYLATE PH 6.5 - REMARK 280 7.0, 1-2 M AMMONIUM SULPHATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.86200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.11750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.56400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.11750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.86200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.56400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 LEU A 164 REMARK 465 SER A 165 REMARK 465 ALA A 166 REMARK 465 GLN A 167 REMARK 465 GLU A 168 REMARK 465 ASP A 169 REMARK 465 SER A 170 REMARK 465 HIS A 171 REMARK 465 SER A 172 REMARK 465 GLU A 173 REMARK 465 GLY A 174 REMARK 465 MET A 175 REMARK 465 ALA A 176 REMARK 465 GLY A 228 REMARK 465 PHE A 229 REMARK 465 ASP A 230 REMARK 465 SER A 231 REMARK 465 PRO A 232 REMARK 465 THR A 233 REMARK 465 GLY A 234 REMARK 465 GLU A 235 REMARK 465 HIS A 236 REMARK 465 GLY A 237 REMARK 465 GLY A 238 REMARK 465 ASP A 239 REMARK 465 GLY A 240 REMARK 465 LEU A 241 REMARK 465 SER A 242 REMARK 465 GLY B -1 REMARK 465 GLY B 161 REMARK 465 ASN B 162 REMARK 465 ALA B 163 REMARK 465 LEU B 164 REMARK 465 SER B 165 REMARK 465 ALA B 166 REMARK 465 GLN B 167 REMARK 465 GLU B 168 REMARK 465 ASP B 169 REMARK 465 SER B 170 REMARK 465 HIS B 171 REMARK 465 SER B 172 REMARK 465 GLU B 173 REMARK 465 GLY B 174 REMARK 465 MET B 175 REMARK 465 ALA B 176 REMARK 465 THR B 233 REMARK 465 GLY B 234 REMARK 465 GLU B 235 REMARK 465 HIS B 236 REMARK 465 GLY B 237 REMARK 465 GLY B 238 REMARK 465 ASP B 239 REMARK 465 GLY B 240 REMARK 465 LEU B 241 REMARK 465 SER B 242 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 GLU A 77 OE1 OE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 ARG B 17 NE CZ NH1 NH2 REMARK 470 LYS B 23 CE NZ REMARK 470 VAL B 44 CG1 CG2 REMARK 470 GLU B 77 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -11.04 -147.65 REMARK 500 SER B 19 -125.45 42.55 REMARK 500 ARG B 110 -143.55 -120.30 REMARK 500 TYR B 111 -121.27 17.11 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6NVR A 1 242 UNP A0A2T7GQ66_9MYCO DBREF2 6NVR A A0A2T7GQ66 1 242 DBREF1 6NVR B 1 242 UNP A0A2T7GQ66_9MYCO DBREF2 6NVR B A0A2T7GQ66 1 242 SEQADV 6NVR GLY A -1 UNP A0A2T7GQ6 EXPRESSION TAG SEQADV 6NVR SER A 0 UNP A0A2T7GQ6 EXPRESSION TAG SEQADV 6NVR GLY B -1 UNP A0A2T7GQ6 EXPRESSION TAG SEQADV 6NVR SER B 0 UNP A0A2T7GQ6 EXPRESSION TAG SEQRES 1 A 244 GLY SER MET LYS ILE ASP VAL VAL THR ILE PHE PRO GLU SEQRES 2 A 244 TYR LEU GLN PRO VAL ARG GLN SER LEU PRO GLY LYS ALA SEQRES 3 A 244 ILE ASP ALA GLY LEU VAL ASP VAL ALA VAL HIS ASP LEU SEQRES 4 A 244 ARG ARG TRP THR HIS ASP VAL HIS LYS SER VAL ASP ASP SEQRES 5 A 244 SER PRO TYR GLY GLY GLY PRO GLY MET VAL MET LYS PRO SEQRES 6 A 244 THR VAL TRP GLY ASP ALA LEU ASP GLU ILE CYS THR SER SEQRES 7 A 244 GLU THR LEU LEU VAL VAL PRO THR PRO ALA GLY TYR PRO SEQRES 8 A 244 PHE THR GLN GLU THR ALA TRP GLN TRP SER THR GLU ASP SEQRES 9 A 244 HIS LEU VAL ILE ALA CYS GLY ARG TYR GLU GLY ILE ASP SEQRES 10 A 244 GLN ARG VAL ALA ASP ASP ALA ALA THR ARG MET ARG VAL SEQRES 11 A 244 ARG GLU VAL SER ILE GLY ASP TYR VAL LEU ASN GLY GLY SEQRES 12 A 244 GLU ALA ALA ALA LEU VAL ILE ILE GLU ALA VAL LEU ARG SEQRES 13 A 244 LEU VAL PRO GLY VAL LEU GLY ASN ALA LEU SER ALA GLN SEQRES 14 A 244 GLU ASP SER HIS SER GLU GLY MET ALA SER LEU LEU GLU SEQRES 15 A 244 GLY PRO SER TYR THR ARG PRO PRO SER TRP ARG GLY MET SEQRES 16 A 244 ASP VAL PRO PRO VAL LEU LEU SER GLY ASP HIS ALA LYS SEQRES 17 A 244 ILE ALA ALA TRP ARG ALA GLU GLN SER ARG GLN ARG THR SEQRES 18 A 244 ILE GLU ARG ARG PRO ASP LEU LEU GLY PHE ASP SER PRO SEQRES 19 A 244 THR GLY GLU HIS GLY GLY ASP GLY LEU SER SEQRES 1 B 244 GLY SER MET LYS ILE ASP VAL VAL THR ILE PHE PRO GLU SEQRES 2 B 244 TYR LEU GLN PRO VAL ARG GLN SER LEU PRO GLY LYS ALA SEQRES 3 B 244 ILE ASP ALA GLY LEU VAL ASP VAL ALA VAL HIS ASP LEU SEQRES 4 B 244 ARG ARG TRP THR HIS ASP VAL HIS LYS SER VAL ASP ASP SEQRES 5 B 244 SER PRO TYR GLY GLY GLY PRO GLY MET VAL MET LYS PRO SEQRES 6 B 244 THR VAL TRP GLY ASP ALA LEU ASP GLU ILE CYS THR SER SEQRES 7 B 244 GLU THR LEU LEU VAL VAL PRO THR PRO ALA GLY TYR PRO SEQRES 8 B 244 PHE THR GLN GLU THR ALA TRP GLN TRP SER THR GLU ASP SEQRES 9 B 244 HIS LEU VAL ILE ALA CYS GLY ARG TYR GLU GLY ILE ASP SEQRES 10 B 244 GLN ARG VAL ALA ASP ASP ALA ALA THR ARG MET ARG VAL SEQRES 11 B 244 ARG GLU VAL SER ILE GLY ASP TYR VAL LEU ASN GLY GLY SEQRES 12 B 244 GLU ALA ALA ALA LEU VAL ILE ILE GLU ALA VAL LEU ARG SEQRES 13 B 244 LEU VAL PRO GLY VAL LEU GLY ASN ALA LEU SER ALA GLN SEQRES 14 B 244 GLU ASP SER HIS SER GLU GLY MET ALA SER LEU LEU GLU SEQRES 15 B 244 GLY PRO SER TYR THR ARG PRO PRO SER TRP ARG GLY MET SEQRES 16 B 244 ASP VAL PRO PRO VAL LEU LEU SER GLY ASP HIS ALA LYS SEQRES 17 B 244 ILE ALA ALA TRP ARG ALA GLU GLN SER ARG GLN ARG THR SEQRES 18 B 244 ILE GLU ARG ARG PRO ASP LEU LEU GLY PHE ASP SER PRO SEQRES 19 B 244 THR GLY GLU HIS GLY GLY ASP GLY LEU SER FORMUL 3 HOH *349(H2 O) HELIX 1 AA1 PHE A 9 TYR A 12 5 4 HELIX 2 AA2 LEU A 13 GLN A 18 1 6 HELIX 3 AA3 PRO A 21 ALA A 27 1 7 HELIX 4 AA4 ARG A 38 THR A 41 5 4 HELIX 5 AA5 LYS A 62 CYS A 74 1 13 HELIX 6 AA6 THR A 91 SER A 99 1 9 HELIX 7 AA7 ASP A 115 ALA A 123 1 9 HELIX 8 AA8 GLY A 141 ARG A 154 1 14 HELIX 9 AA9 PRO A 196 SER A 201 5 6 HELIX 10 AB1 ASP A 203 ARG A 223 1 21 HELIX 11 AB2 PRO A 224 LEU A 227 5 4 HELIX 12 AB3 PHE B 9 ARG B 17 5 9 HELIX 13 AB4 GLN B 18 ALA B 27 1 10 HELIX 14 AB5 ARG B 38 THR B 41 5 4 HELIX 15 AB6 LYS B 62 CYS B 74 1 13 HELIX 16 AB7 THR B 91 SER B 99 1 9 HELIX 17 AB8 GLN B 116 ALA B 123 1 8 HELIX 18 AB9 GLY B 141 ARG B 154 1 14 HELIX 19 AC1 PRO B 196 SER B 201 5 6 HELIX 20 AC2 ASP B 203 ARG B 223 1 21 HELIX 21 AC3 PRO B 224 GLY B 228 5 5 SHEET 1 AA1 6 VAL A 30 ASP A 36 0 SHEET 2 AA1 6 MET A 1 THR A 7 1 N VAL A 5 O HIS A 35 SHEET 3 AA1 6 HIS A 103 ALA A 107 1 O ILE A 106 N ASP A 4 SHEET 4 AA1 6 LEU A 79 PRO A 83 1 N VAL A 81 O VAL A 105 SHEET 5 AA1 6 ARG A 127 SER A 132 1 O ARG A 129 N LEU A 80 SHEET 6 AA1 6 TYR A 88 PRO A 89 1 N TYR A 88 O GLU A 130 SHEET 1 AA2 2 ASP A 49 ASP A 50 0 SHEET 2 AA2 2 VAL A 60 MET A 61 -1 O VAL A 60 N ASP A 50 SHEET 1 AA3 2 SER A 189 TRP A 190 0 SHEET 2 AA3 2 MET A 193 ASP A 194 -1 O MET A 193 N TRP A 190 SHEET 1 AA4 6 VAL B 30 ASP B 36 0 SHEET 2 AA4 6 MET B 1 THR B 7 1 N VAL B 5 O HIS B 35 SHEET 3 AA4 6 HIS B 103 ALA B 107 1 O ILE B 106 N ASP B 4 SHEET 4 AA4 6 LEU B 79 PRO B 83 1 N VAL B 81 O VAL B 105 SHEET 5 AA4 6 ARG B 127 SER B 132 1 O ARG B 129 N LEU B 80 SHEET 6 AA4 6 TYR B 88 PRO B 89 1 N TYR B 88 O SER B 132 SHEET 1 AA5 2 ASP B 49 ASP B 50 0 SHEET 2 AA5 2 VAL B 60 MET B 61 -1 O VAL B 60 N ASP B 50 SHEET 1 AA6 2 SER B 189 TRP B 190 0 SHEET 2 AA6 2 MET B 193 ASP B 194 -1 O MET B 193 N TRP B 190 CISPEP 1 ARG A 186 PRO A 187 0 1.62 CISPEP 2 ARG B 186 PRO B 187 0 1.20 CRYST1 73.724 79.128 86.235 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012638 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011596 0.00000