HEADER ENDOCYTOSIS 04-MAR-19 6O5O TITLE CRYSTAL STRUCTURE OF THE DISABLED-2 (DAB2) DAB HOMOLOGY DOMAIN IN TITLE 2 COMPLEX WITH PEPTIDE STA02 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISABLED HOMOLOG 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADAPTOR MOLECULE DISABLED-2,DIFFERENTIALLY EXPRESSED IN COMPND 5 OVARIAN CARCINOMA 2,DOC-2,DIFFERENTIALLY-EXPRESSED PROTEIN 2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACE-QNGFDNPNYQPQENMQA; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DAB2, DOC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS PEPTIDE BINDING, PEPTIDE INHIBITOR, PROTEIN-PROTEIN INTERACTION, KEYWDS 2 ENDOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR M.CHAVEZ,D.R.MADDEN REVDAT 2 11-OCT-23 6O5O 1 REMARK LINK REVDAT 1 11-MAR-20 6O5O 0 JRNL AUTH M.CHAVEZ,D.R.MADDEN JRNL TITL CRYSTAL STRUCTURE OF THE DISABLED-2 (DAB2) DAB HOMOLOGY JRNL TITL 2 DOMAIN IN COMPLEX WITH PEPTIDE STA02 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 49941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9428 - 4.5690 1.00 2820 119 0.1689 0.2399 REMARK 3 2 4.5690 - 3.6337 1.00 2697 124 0.1468 0.1371 REMARK 3 3 3.6337 - 3.1765 1.00 2562 253 0.1579 0.1829 REMARK 3 4 3.1765 - 2.8870 1.00 2661 127 0.1782 0.2139 REMARK 3 5 2.8870 - 2.6806 1.00 2653 128 0.1895 0.2071 REMARK 3 6 2.6806 - 2.5229 1.00 2646 128 0.1759 0.1818 REMARK 3 7 2.5229 - 2.3967 1.00 2642 124 0.1764 0.1944 REMARK 3 8 2.3967 - 2.2926 1.00 2619 131 0.1698 0.2171 REMARK 3 9 2.2926 - 2.2044 1.00 2653 128 0.1766 0.2112 REMARK 3 10 2.2044 - 2.1284 1.00 2614 129 0.1716 0.2147 REMARK 3 11 2.1284 - 2.0620 1.00 2636 130 0.1784 0.2091 REMARK 3 12 2.0620 - 2.0031 1.00 2621 132 0.1838 0.2000 REMARK 3 13 2.0031 - 1.9504 1.00 2478 251 0.1874 0.2188 REMARK 3 14 1.9504 - 1.9028 1.00 2629 128 0.1864 0.2219 REMARK 3 15 1.9028 - 1.8596 1.00 2604 126 0.1964 0.2582 REMARK 3 16 1.8596 - 1.8201 1.00 2645 126 0.2067 0.2665 REMARK 3 17 1.8201 - 1.7837 1.00 2623 124 0.2133 0.2601 REMARK 3 18 1.7837 - 1.7500 1.00 2604 126 0.2250 0.2554 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2757 REMARK 3 ANGLE : 0.961 3708 REMARK 3 CHIRALITY : 0.069 379 REMARK 3 PLANARITY : 0.006 497 REMARK 3 DIHEDRAL : 20.793 1098 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O5O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000239309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.078 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49944 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.942 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1M7E REMARK 200 REMARK 200 REMARK: PLANAR TRAPEZOIDS, OR HEXAGONS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40 MM MGCL, 5 MM NI(II)CL, 0.1 M HEPES REMARK 280 PH 7.0, 18% (W/V) PEG3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NI NI B 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 366 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 336 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 372 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 392 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 182 REMARK 465 GLU A 183 REMARK 465 GLU A 184 REMARK 465 ALA A 185 REMARK 465 SER A 186 REMARK 465 LYS A 187 REMARK 465 ALA A 188 REMARK 465 VAL A 189 REMARK 465 GLU A 190 REMARK 465 ASN A 191 REMARK 465 LYS B 181 REMARK 465 ILE B 182 REMARK 465 GLU B 183 REMARK 465 GLU B 184 REMARK 465 ALA B 185 REMARK 465 SER B 186 REMARK 465 LYS B 187 REMARK 465 ALA B 188 REMARK 465 VAL B 189 REMARK 465 GLU B 190 REMARK 465 ASN B 191 REMARK 465 ASN C 513 REMARK 465 MET C 514 REMARK 465 GLN C 515 REMARK 465 ALA C 516 REMARK 465 GLU D 512 REMARK 465 ASN D 513 REMARK 465 MET D 514 REMARK 465 GLN D 515 REMARK 465 ALA D 516 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ACE C 499 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 173 CD CE NZ REMARK 480 LYS A 174 CD CE NZ REMARK 480 GLU A 178 CG CD OE1 OE2 REMARK 480 LYS A 179 CG CD CE NZ REMARK 480 LYS A 180 CG CD CE NZ REMARK 480 LYS B 174 CD CE NZ REMARK 480 LYS B 175 CE NZ REMARK 480 GLU B 176 CG CD OE1 OE2 REMARK 480 LYS B 179 CB CG CD CE NZ REMARK 480 LYS B 180 CB CG CD CE NZ REMARK 480 GLU C 512 C CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 130 103.11 -161.25 REMARK 500 GLN B 153 -155.31 -108.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 477 DISTANCE = 5.96 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 31 N REMARK 620 2 GLY A 31 O 87.7 REMARK 620 3 GLU A 141 OE1 107.5 74.5 REMARK 620 4 HIS A 144 NE2 105.4 76.5 3.2 REMARK 620 5 HOH A 302 O 162.8 88.0 87.3 89.8 REMARK 620 6 HOH A 386 O 104.3 97.4 23.4 21.0 92.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 31 N REMARK 620 2 GLY A 31 O 75.7 REMARK 620 3 GLU A 141 OE1 89.6 59.4 REMARK 620 4 HIS A 144 NE2 87.3 60.9 3.2 REMARK 620 5 HOH A 302 O 91.4 60.1 1.8 4.5 REMARK 620 6 HOH A 386 O 91.3 64.6 5.2 4.8 4.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 59 OD2 REMARK 620 2 GLN A 143 OE1 94.0 REMARK 620 3 HOH A 336 O 85.1 80.1 REMARK 620 4 HOH A 352 O 88.0 106.1 171.1 REMARK 620 5 HOH A 366 O 88.1 22.5 101.2 84.2 REMARK 620 6 HOH A 366 O 88.5 22.5 101.3 84.1 0.4 REMARK 620 7 HOH A 376 O 173.2 82.5 88.5 98.6 90.8 90.4 REMARK 620 8 HOH A 424 O 96.5 32.0 48.9 137.9 54.3 54.4 77.4 REMARK 620 9 HOH A 424 O 118.3 40.3 55.2 133.6 61.2 61.1 55.5 21.8 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 89 NE2 REMARK 620 2 HIS B 89 NE2 0.0 REMARK 620 3 HOH B 336 O 95.5 95.5 REMARK 620 4 HOH B 336 O 95.5 95.5 0.0 REMARK 620 5 HOH B 372 O 84.9 84.9 178.9 178.9 REMARK 620 6 HOH B 372 O 85.0 85.0 178.8 178.8 0.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 141 OE1 REMARK 620 2 GLU B 141 OE2 55.1 REMARK 620 3 HOH B 301 O 64.7 98.1 REMARK 620 4 HOH B 390 O 146.4 105.0 96.0 REMARK 620 5 HOH B 407 O 131.6 88.6 161.7 65.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE C 499 and GLN C REMARK 800 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE D 499 and GLN D REMARK 800 500 DBREF 6O5O A 31 191 UNP P98082 DAB2_HUMAN 31 191 DBREF 6O5O B 31 191 UNP P98082 DAB2_HUMAN 31 191 DBREF 6O5O C 499 516 PDB 6O5O 6O5O 499 516 DBREF 6O5O D 499 516 PDB 6O5O 6O5O 499 516 SEQRES 1 A 161 GLY PRO GLU LYS THR ASP GLU TYR LEU LEU ALA ARG PHE SEQRES 2 A 161 LYS GLY ASP GLY VAL LYS TYR LYS ALA LYS LEU ILE GLY SEQRES 3 A 161 ILE ASP ASP VAL PRO ASP ALA ARG GLY ASP LYS MET SER SEQRES 4 A 161 GLN ASP SER MET MET LYS LEU LYS GLY MET ALA ALA ALA SEQRES 5 A 161 GLY ARG SER GLN GLY GLN HIS LYS GLN ARG ILE TRP VAL SEQRES 6 A 161 ASN ILE SER LEU SER GLY ILE LYS ILE ILE ASP GLU LYS SEQRES 7 A 161 THR GLY VAL ILE GLU HIS GLU HIS PRO VAL ASN LYS ILE SEQRES 8 A 161 SER PHE ILE ALA ARG ASP VAL THR ASP ASN ARG ALA PHE SEQRES 9 A 161 GLY TYR VAL CYS GLY GLY GLU GLY GLN HIS GLN PHE PHE SEQRES 10 A 161 ALA ILE LYS THR GLY GLN GLN ALA GLU PRO LEU VAL VAL SEQRES 11 A 161 ASP LEU LYS ASP LEU PHE GLN VAL ILE TYR ASN VAL LYS SEQRES 12 A 161 LYS LYS GLU GLU GLU LYS LYS LYS ILE GLU GLU ALA SER SEQRES 13 A 161 LYS ALA VAL GLU ASN SEQRES 1 B 161 GLY PRO GLU LYS THR ASP GLU TYR LEU LEU ALA ARG PHE SEQRES 2 B 161 LYS GLY ASP GLY VAL LYS TYR LYS ALA LYS LEU ILE GLY SEQRES 3 B 161 ILE ASP ASP VAL PRO ASP ALA ARG GLY ASP LYS MET SER SEQRES 4 B 161 GLN ASP SER MET MET LYS LEU LYS GLY MET ALA ALA ALA SEQRES 5 B 161 GLY ARG SER GLN GLY GLN HIS LYS GLN ARG ILE TRP VAL SEQRES 6 B 161 ASN ILE SER LEU SER GLY ILE LYS ILE ILE ASP GLU LYS SEQRES 7 B 161 THR GLY VAL ILE GLU HIS GLU HIS PRO VAL ASN LYS ILE SEQRES 8 B 161 SER PHE ILE ALA ARG ASP VAL THR ASP ASN ARG ALA PHE SEQRES 9 B 161 GLY TYR VAL CYS GLY GLY GLU GLY GLN HIS GLN PHE PHE SEQRES 10 B 161 ALA ILE LYS THR GLY GLN GLN ALA GLU PRO LEU VAL VAL SEQRES 11 B 161 ASP LEU LYS ASP LEU PHE GLN VAL ILE TYR ASN VAL LYS SEQRES 12 B 161 LYS LYS GLU GLU GLU LYS LYS LYS ILE GLU GLU ALA SER SEQRES 13 B 161 LYS ALA VAL GLU ASN SEQRES 1 C 18 ACE GLN ASN GLY PHE ASP ASN PRO ASN TYR GLN PRO GLN SEQRES 2 C 18 GLU ASN MET GLN ALA SEQRES 1 D 18 ACE GLN ASN GLY PHE ASP ASN PRO ASN TYR GLN PRO GLN SEQRES 2 D 18 GLU ASN MET GLN ALA HET ACE C 499 3 HET ACE D 499 3 HET NI A 201 1 HET NI A 202 1 HET NI A 203 1 HET MG A 204 1 HET NI B 201 1 HET MG B 202 1 HETNAM ACE ACETYL GROUP HETNAM NI NICKEL (II) ION HETNAM MG MAGNESIUM ION FORMUL 3 ACE 2(C2 H4 O) FORMUL 5 NI 4(NI 2+) FORMUL 8 MG 2(MG 2+) FORMUL 11 HOH *343(H2 O) HELIX 1 AA1 THR A 35 LYS A 44 1 10 HELIX 2 AA2 GLY A 65 GLN A 86 1 22 HELIX 3 AA3 PRO A 117 ASN A 119 5 3 HELIX 4 AA4 ALA A 155 LYS A 181 1 27 HELIX 5 AA5 THR B 35 LYS B 44 1 10 HELIX 6 AA6 GLY B 65 SER B 85 1 21 HELIX 7 AA7 PRO B 117 ASN B 119 5 3 HELIX 8 AA8 ALA B 155 LYS B 180 1 26 SHEET 1 AA1 8 ILE A 112 HIS A 116 0 SHEET 2 AA1 8 GLY A 101 ASP A 106 -1 N ILE A 104 O HIS A 114 SHEET 3 AA1 8 GLN A 91 SER A 98 -1 N ASN A 96 O LYS A 103 SHEET 4 AA1 8 VAL A 48 ASP A 59 -1 N VAL A 48 O ILE A 97 SHEET 5 AA1 8 GLN A 145 THR A 151 -1 O PHE A 146 N ASP A 58 SHEET 6 AA1 8 ALA A 133 CYS A 138 -1 N PHE A 134 O ILE A 149 SHEET 7 AA1 8 ILE A 121 ARG A 126 -1 N ALA A 125 O GLY A 135 SHEET 8 AA1 8 PHE C 503 ASP C 504 -1 O PHE C 503 N ILE A 124 SHEET 1 AA2 8 ILE B 112 HIS B 116 0 SHEET 2 AA2 8 GLY B 101 ASP B 106 -1 N ILE B 104 O HIS B 114 SHEET 3 AA2 8 GLN B 91 SER B 98 -1 N ASN B 96 O LYS B 103 SHEET 4 AA2 8 VAL B 48 ASP B 59 -1 N VAL B 48 O ILE B 97 SHEET 5 AA2 8 GLN B 145 THR B 151 -1 O LYS B 150 N LYS B 53 SHEET 6 AA2 8 ALA B 133 CYS B 138 -1 N PHE B 134 O ILE B 149 SHEET 7 AA2 8 ILE B 121 ARG B 126 -1 N ALA B 125 O GLY B 135 SHEET 8 AA2 8 PHE D 503 ASP D 504 -1 O PHE D 503 N ILE B 124 LINK C ACE C 499 N GLN C 500 1555 1555 1.33 LINK C ACE D 499 N GLN D 500 1555 1555 1.34 LINK N GLY A 31 NI NI A 201 1555 1555 1.98 LINK O GLY A 31 NI NI A 201 1555 1555 1.98 LINK N GLY A 31 NI NI A 202 1555 3665 2.26 LINK O GLY A 31 NI NI A 202 1555 3665 2.20 LINK OD2 ASP A 59 MG MG A 204 1555 1555 2.05 LINK NE2 HIS A 89 NI NI A 203 1555 1555 2.07 LINK OE1 GLU A 141 NI NI A 201 1555 2655 2.41 LINK OE1 GLU A 141 NI NI A 202 1555 1555 1.80 LINK OE1 GLN A 143 MG MG A 204 1555 5556 2.06 LINK NE2 HIS A 144 NI NI A 201 1555 2655 2.23 LINK NE2 HIS A 144 NI NI A 202 1555 1555 2.01 LINK NI NI A 201 O HOH A 302 1555 3665 2.28 LINK NI NI A 201 O HOH A 386 1555 3665 1.97 LINK NI NI A 202 O HOH A 302 1555 1555 2.02 LINK NI NI A 202 O HOH A 386 1555 1555 2.59 LINK MG MG A 204 O HOH A 336 1555 1555 2.00 LINK MG MG A 204 O HOH A 352 1555 1555 1.93 LINK MG MG A 204 O HOH A 366 1555 1555 1.99 LINK MG MG A 204 O HOH A 366 1555 5556 2.00 LINK MG MG A 204 O HOH A 376 1555 5556 2.19 LINK MG MG A 204 O HOH A 424 1555 1555 2.69 LINK MG MG A 204 O HOH A 424 1555 5556 2.35 LINK NE2 HIS B 89 NI NI B 201 1555 1555 2.06 LINK NE2 HIS B 89 NI NI B 201 1555 2655 2.06 LINK OE1 GLU B 141 MG MG B 202 1555 1555 2.37 LINK OE2 GLU B 141 MG MG B 202 1555 1555 2.38 LINK NI NI B 201 O HOH B 336 1555 1555 2.13 LINK NI NI B 201 O HOH B 336 1555 2655 2.13 LINK NI NI B 201 O HOH B 372 1555 1555 2.19 LINK NI NI B 201 O HOH B 372 1555 2655 2.19 LINK MG MG B 202 O HOH B 301 1555 1555 1.74 LINK MG MG B 202 O HOH B 390 1555 1555 1.86 LINK MG MG B 202 O HOH B 407 1555 1555 2.96 SITE 1 AC1 5 GLY A 31 GLU A 141 HIS A 144 HOH A 302 SITE 2 AC1 5 HOH A 386 SITE 1 AC2 5 GLY A 31 GLU A 141 HIS A 144 HOH A 302 SITE 2 AC2 5 HOH A 386 SITE 1 AC3 1 HIS A 89 SITE 1 AC4 7 ASP A 59 GLN A 143 HOH A 336 HOH A 352 SITE 2 AC4 7 HOH A 366 HOH A 376 HOH A 424 SITE 1 AC5 3 HIS B 89 HOH B 336 HOH B 372 SITE 1 AC6 5 GLU B 141 HIS B 144 HOH B 301 HOH B 390 SITE 2 AC6 5 HOH B 407 SITE 1 AC7 2 ASN C 501 HOH C 604 SITE 1 AC8 12 PRO A 32 GLU A 33 LYS A 34 HOH A 320 SITE 2 AC8 12 GLY B 65 ASP B 66 PHE B 123 ASN D 501 SITE 3 AC8 12 GLY D 502 HOH D 602 HOH D 607 HOH D 612 CRYST1 102.724 102.724 80.831 90.00 90.00 120.00 P 3 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009735 0.005620 0.000000 0.00000 SCALE2 0.000000 0.011241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012371 0.00000