HEADER IMMUNE SYSTEM 07-MAR-19 6O73 TITLE CRYSTAL STRUCTURE OF APO CSM1-CSM4 CASSETTE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CSM1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.-.-,2.7.7.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CSM4; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS ONNURINEUS; SOURCE 3 ORGANISM_TAXID: 342948; SOURCE 4 GENE: TON_0893; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THERMOCOCCUS ONNURINEUS; SOURCE 9 ORGANISM_TAXID: 342948; SOURCE 10 GENE: TON_0896; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYPE III-A CRISPR-CAS SYSTEM, APO CSM1-CSM4 CASSETTE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.JIA,D.J.PATEL REVDAT 3 11-OCT-23 6O73 1 REMARK REVDAT 2 18-SEP-19 6O73 1 JRNL REVDAT 1 31-JUL-19 6O73 0 JRNL AUTH N.JIA,R.JONES,G.SUKENICK,D.J.PATEL JRNL TITL SECOND MESSENGER CA4FORMATION WITHIN THE COMPOSITE CSM1 PALM JRNL TITL 2 POCKET OF TYPE III-A CRISPR-CAS CSM COMPLEX AND ITS RELEASE JRNL TITL 3 PATH. JRNL REF MOL.CELL V. 75 933 2019 JRNL REFN ISSN 1097-2765 JRNL PMID 31326272 JRNL DOI 10.1016/J.MOLCEL.2019.06.013 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1713 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE SET COUNT : 173 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7662 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 100.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.64000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 2.07000 REMARK 3 B12 (A**2) : -0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.519 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.416 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.072 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7841 ; 0.003 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 7495 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10580 ; 1.272 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17284 ; 1.152 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 942 ; 7.415 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 443 ;30.693 ;20.497 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1356 ;16.931 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 75 ;16.591 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 957 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8706 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1819 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3810 ; 4.520 ;10.518 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3808 ; 4.521 ;10.517 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4738 ; 7.282 ;15.753 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4738 ; 7.281 ;15.753 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4030 ; 4.205 ;10.991 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4031 ; 4.204 ;10.992 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5842 ; 7.136 ;16.294 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8711 ;10.845 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8712 ;10.844 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6O73 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240161. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30509 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 34.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6MUA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE-CITRATE PH 4.2, 5% REMARK 280 PEG3000, 25% 1,2-PROPANEDIOL, AND 10% GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.61200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.80600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 91.20900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.40300 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 152.01500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 121.61200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 60.80600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 30.40300 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 91.20900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 152.01500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 GLN A -2 REMARK 465 ASP A -1 REMARK 465 PRO A 0 REMARK 465 PHE A 59 REMARK 465 HIS A 60 REMARK 465 HIS A 61 REMARK 465 LYS A 62 REMARK 465 GLY A 63 REMARK 465 HIS A 64 REMARK 465 MET A 65 REMARK 465 LYS A 66 REMARK 465 GLY A 106 REMARK 465 GLU A 107 REMARK 465 ARG A 108 REMARK 465 GLU A 109 REMARK 465 GLU A 110 REMARK 465 GLY A 111 REMARK 465 GLN A 112 REMARK 465 VAL A 222 REMARK 465 ARG A 223 REMARK 465 SER A 224 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 GLY A 254 REMARK 465 GLY A 348 REMARK 465 LYS A 349 REMARK 465 HIS A 380 REMARK 465 GLY A 381 REMARK 465 HIS A 382 REMARK 465 THR A 383 REMARK 465 GLU A 384 REMARK 465 ARG A 385 REMARK 465 LEU A 386 REMARK 465 ALA A 387 REMARK 465 GLU A 388 REMARK 465 CYS A 389 REMARK 465 PRO A 390 REMARK 465 VAL A 391 REMARK 465 CYS A 392 REMARK 465 GLY A 393 REMARK 465 ARG A 394 REMARK 465 GLU A 395 REMARK 465 LEU A 396 REMARK 465 PRO A 397 REMARK 465 GLU A 398 REMARK 465 GLY A 399 REMARK 465 LYS A 400 REMARK 465 LEU A 401 REMARK 465 GLU A 402 REMARK 465 PRO A 403 REMARK 465 SER A 404 REMARK 465 ALA A 405 REMARK 465 SER A 406 REMARK 465 ASP A 407 REMARK 465 PRO A 408 REMARK 465 GLU A 409 REMARK 465 THR A 410 REMARK 465 LYS A 411 REMARK 465 VAL A 412 REMARK 465 CYS A 413 REMARK 465 PRO A 414 REMARK 465 THR A 415 REMARK 465 CYS A 416 REMARK 465 ARG A 735 REMARK 465 HIS A 736 REMARK 465 GLY A 737 REMARK 465 ARG A 777 REMARK 465 MET B 1 REMARK 465 ILE B 80 REMARK 465 LEU B 81 REMARK 465 THR B 82 REMARK 465 GLY B 83 REMARK 465 LEU B 84 REMARK 465 VAL B 132 REMARK 465 VAL B 133 REMARK 465 LEU B 134 REMARK 465 ASP B 135 REMARK 465 ARG B 136 REMARK 465 VAL B 137 REMARK 465 THR B 138 REMARK 465 GLN B 139 REMARK 465 ASP B 140 REMARK 465 SER B 141 REMARK 465 SER B 142 REMARK 465 ILE B 143 REMARK 465 TYR B 144 REMARK 465 THR B 182 REMARK 465 GLY B 183 REMARK 465 ILE B 184 REMARK 465 GLY B 185 REMARK 465 GLY B 186 REMARK 465 LYS B 187 REMARK 465 SER B 188 REMARK 465 THR B 189 REMARK 465 TRP B 190 REMARK 465 GLY B 191 REMARK 465 ALA B 192 REMARK 465 GLY B 193 REMARK 465 GLY B 233 REMARK 465 GLY B 234 REMARK 465 TRP B 235 REMARK 465 SER B 236 REMARK 465 PHE B 237 REMARK 465 GLY B 238 REMARK 465 ARG B 239 REMARK 465 ARG B 240 REMARK 465 LYS B 241 REMARK 465 PRO B 242 REMARK 465 GLY B 266 REMARK 465 LEU B 267 REMARK 465 SER B 268 REMARK 465 HIS B 269 REMARK 465 LEU B 288 REMARK 465 GLU B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 27 46.85 33.37 REMARK 500 THR A 45 -17.37 68.95 REMARK 500 ALA A 104 -74.12 -62.90 REMARK 500 ALA A 115 35.96 -80.91 REMARK 500 SER A 116 -19.99 -145.29 REMARK 500 PRO A 125 -7.37 -59.44 REMARK 500 LYS A 138 -76.21 -84.90 REMARK 500 LEU A 170 15.66 59.23 REMARK 500 PHE A 185 52.17 -102.28 REMARK 500 CYS A 227 38.33 -85.43 REMARK 500 ARG A 228 -40.94 -144.69 REMARK 500 ASN A 291 89.42 -157.75 REMARK 500 GLU A 326 -146.07 54.80 REMARK 500 PHE A 378 66.12 -102.93 REMARK 500 PRO A 427 48.31 -84.40 REMARK 500 LYS A 428 -1.92 -151.17 REMARK 500 PHE A 448 -43.56 -133.93 REMARK 500 ASP A 521 136.89 -174.43 REMARK 500 ILE A 565 -71.54 -77.70 REMARK 500 GLU A 577 78.89 -117.27 REMARK 500 ALA A 585 -129.42 -102.60 REMARK 500 ASP A 588 -69.26 68.68 REMARK 500 GLU A 650 50.99 -92.39 REMARK 500 ASN A 653 38.62 70.14 REMARK 500 LEU A 664 35.74 -92.55 REMARK 500 GLU A 700 106.92 -52.50 REMARK 500 SER A 701 -6.41 97.38 REMARK 500 ARG A 755 7.01 -68.26 REMARK 500 LYS A 756 22.79 46.74 REMARK 500 ASP B 17 164.56 178.98 REMARK 500 SER B 56 179.24 -58.70 REMARK 500 LEU B 113 46.96 35.20 REMARK 500 MET B 202 118.98 -168.57 REMARK 500 PRO B 224 -172.82 -65.68 REMARK 500 VAL B 225 -76.05 -91.11 REMARK 500 PHE B 278 68.83 -114.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 801 DBREF 6O73 A 1 777 UNP B6YWB8 B6YWB8_THEON 1 777 DBREF 6O73 B 1 289 UNP B6YWC1 B6YWC1_THEON 1 289 SEQADV 6O73 MET A -13 UNP B6YWB8 INITIATING METHIONINE SEQADV 6O73 GLY A -12 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 SER A -11 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 SER A -10 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -9 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -8 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -7 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -6 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -5 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 HIS A -4 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 SER A -3 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 GLN A -2 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 ASP A -1 UNP B6YWB8 EXPRESSION TAG SEQADV 6O73 PRO A 0 UNP B6YWB8 EXPRESSION TAG SEQRES 1 A 791 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 791 PRO MET GLU ILE ASP GLU LEU THR ALA LEU GLY GLY LEU SEQRES 3 A 791 LEU HIS ASP ILE GLY LYS PRO VAL GLN ARG ALA GLY LEU SEQRES 4 A 791 TYR SER GLY ASP HIS SER THR GLN GLY ALA ARG PHE LEU SEQRES 5 A 791 ARG ASP LEU ALA GLU ASN THR GLY ARG ALA GLU TYR GLU SEQRES 6 A 791 LEU LEU SER LEU PHE SER GLU PHE HIS HIS LYS GLY HIS SEQRES 7 A 791 MET LYS ASN ASP GLU LEU MET ILE ARG ARG ILE LYS GLU SEQRES 8 A 791 LEU SER PRO GLU ARG PHE GLY LEU THR MET GLU ASP VAL SEQRES 9 A 791 LEU ASN ALA LEU TRP ILE VAL TYR GLU ALA ASP ASN LEU SEQRES 10 A 791 ALA SER GLY GLU ARG GLU GLU GLY GLN PRO GLN ALA SER SEQRES 11 A 791 ARG PRO LEU TYR SER VAL PHE ASN PRO GLY LYS ALA TYR SEQRES 12 A 791 PRO TRP ALA GLU LEU ASP PHE GLU LYS GLU LEU PRO VAL SEQRES 13 A 791 PRO GLY ASP VAL PHE SER ILE ARG SER GLN ASP TYR ARG SEQRES 14 A 791 GLU LEU VAL LYS ARG LEU TRP GLU GLU LEU SER LYS ALA SEQRES 15 A 791 LYS LEU ARG SER ASP ARG LEU LEU PRO VAL LEU GLU LYS SEQRES 16 A 791 TYR LEU THR PHE VAL SER SER VAL THR SER GLU GLY ASN SEQRES 17 A 791 ILE ILE SER LEU TYR ASP HIS MET ARG MET THR SER ALA SEQRES 18 A 791 ILE ALA LEU ALA MET LEU ARG ALA GLY CYS THR ALA GLU SEQRES 19 A 791 ASP VAL ARG SER GLY ARG CYS ARG LYS GLU LYS ARG PHE SEQRES 20 A 791 LEU LEU ILE GLU GLY ASP PHE SER GLY ILE GLN ASP PHE SEQRES 21 A 791 ILE TYR ARG VAL SER GLY LYS GLY THR LEU LYS TYR LEU SEQRES 22 A 791 ARG ALA ARG SER ALA TYR LEU GLU LEU ILE GLY TRP ASP SEQRES 23 A 791 VAL VAL LEU GLU ILE LEU SER ARG LEU GLY LEU THR ARG SEQRES 24 A 791 ALA ASN VAL VAL PHE ASN ALA GLY GLY HIS PHE MET ILE SEQRES 25 A 791 ILE ALA GLN ASN THR PRO ASP ALA VAL LYS GLU LEU GLU SEQRES 26 A 791 GLU ILE ARG ALA LYS ALA VAL GLU TRP LEU TYR ARG GLU SEQRES 27 A 791 PHE GLU SER ASP LEU TYR LEU ALA ILE GLU TRP GLU PRO SEQRES 28 A 791 VAL SER GLY ARG GLU PHE GLY ARG GLU GLY GLY LYS ASN SEQRES 29 A 791 LEU PHE ALA GLU ALA ARG LYS ARG LEU LYS HIS LYS LEU SEQRES 30 A 791 THR VAL ARG LYS LEU LYS ARG PHE GLY GLU ILE LYS GLY SEQRES 31 A 791 LEU PHE GLU HIS GLY HIS THR GLU ARG LEU ALA GLU CYS SEQRES 32 A 791 PRO VAL CYS GLY ARG GLU LEU PRO GLU GLY LYS LEU GLU SEQRES 33 A 791 PRO SER ALA SER ASP PRO GLU THR LYS VAL CYS PRO THR SEQRES 34 A 791 CYS ASN ARG LEU VAL SER LEU GLY GLY ASN LEU PRO LYS SEQRES 35 A 791 LEU LEU GLY PHE GLY ARG THR ALA LYS ASN ASP ALA GLY SEQRES 36 A 791 VAL LEU VAL GLU GLY PRO PHE SER GLY PHE VAL PRO TYR SEQRES 37 A 791 LEU GLN GLY GLY ARG PRO VAL GLY GLU GLN ILE LEU VAL SEQRES 38 A 791 LYS ASN THR LEU ASN PRO GLY GLU ILE PRO GLU SER ALA SEQRES 39 A 791 GLN PHE VAL PRO TYR PHE VAL ALA ASP TYR PHE LYS LYS SEQRES 40 A 791 ASP PRO LYS GLY GLY VAL ALA THR PHE GLU GLU LEU SER SEQRES 41 A 791 MET ALA SER THR GLY THR ARG ARG LEU GLY VAL MET LYS SEQRES 42 A 791 GLY ASP VAL ASP ARG LEU GLY GLU PHE PHE SER SER MET SEQRES 43 A 791 ASP SER PRO SER LYS LEU ALA THR ALA SER ARG PHE MET SEQRES 44 A 791 ASP TYR PHE PHE LYS GLY TYR ILE GLY ALA ILE ILE GLU SEQRES 45 A 791 GLY LYS PHE GLY TYR ILE ILE GLY ASP VAL PRO SER LEU SEQRES 46 A 791 ARG ASP TRP PRO GLU GLU PRO ASP ILE VAL VAL VAL TYR SEQRES 47 A 791 ALA GLY GLY ASP ASP PHE PHE ILE VAL GLY ALA TRP ASP SEQRES 48 A 791 GLN ILE PHE GLU LEU ALA PHE ARG VAL ARG ARG ALA PHE SEQRES 49 A 791 ASN ALA TYR THR GLY GLY LYS LEU THR LEU SER VAL GLY SEQRES 50 A 791 LEU GLY TYR PHE ASP GLU ARG THR PRO ILE TYR ARG MET SEQRES 51 A 791 ALA ASP VAL VAL SER GLU ARG LEU ASP THR ALA LYS ASP SEQRES 52 A 791 GLU GLY ARG ASN ARG VAL PHE VAL VAL GLY ARG SER ARG SEQRES 53 A 791 PRO LEU ASP GLY LYS HIS LYS LEU SER TYR GLU TRP ASN SEQRES 54 A 791 HIS TYR GLU GLU LEU TRP ARG THR TYR ALA PRO ARG ILE SEQRES 55 A 791 TYR ALA GLY ASN GLY ARG LEU LYS GLY LYS LEU GLU SER SEQRES 56 A 791 LYS LYS GLY LEU LEU TRP LYS LEU LEU GLU ILE ARG GLU SEQRES 57 A 791 LEU TYR VAL ARG ASP PRO ASN ASP VAL ARG TRP ALA TYR SEQRES 58 A 791 LEU THR ALA TYR LEU LEU GLY ARG HIS GLY LEU SER ASP SEQRES 59 A 791 LEU PHE PRO GLU LEU VAL GLY ILE ASP THR LYS ALA VAL SEQRES 60 A 791 GLU ARG LYS GLU PRO GLN PRO VAL TYR TRP VAL ASP GLY SEQRES 61 A 791 VAL LEU LYS ILE VAL LEU MET ALA VAL ARG ARG SEQRES 1 B 289 MET PRO LYS PHE ILE ALA VAL LYS LEU ILE PRO LYS GLY SEQRES 2 B 289 PRO PHE ARG ASP ILE PRO ARG ALA ASP THR LEU PHE GLY SEQRES 3 B 289 ALA ILE GLY ASN ALA ILE SER ALA ILE HIS GLY GLN SER SEQRES 4 B 289 ALA VAL GLU GLU LEU VAL ASP ALA PHE VAL GLY GLY ALA SEQRES 5 B 289 ARG ILE SER SER ALA PHE PRO TYR SER GLY ASP THR TYR SEQRES 6 B 289 TYR LEU PRO LYS PRO LEU SER VAL GLU PRO ALA LEU GLU SEQRES 7 B 289 GLY ILE LEU THR GLY LEU ASP GLU GLU GLU ARG TYR THR SEQRES 8 B 289 THR ALA LYS ARG LEU ARG LYS ALA LYS TYR LEU ASP LEU SEQRES 9 B 289 LYS ASN PHE GLU LEU ALA LEU ARG LEU ARG PRO PHE THR SEQRES 10 B 289 ILE PRO GLU GLU ILE PRO TYR ALA ARG VAL ASP VAL PRO SEQRES 11 B 289 ARG VAL VAL LEU ASP ARG VAL THR GLN ASP SER SER ILE SEQRES 12 B 289 TYR PHE TRP GLU GLU ILE ARG PHE ARG GLU LYS SER GLY SEQRES 13 B 289 VAL TYR PHE LEU TYR SER GLY PRO ARG GLU VAL PHE ASP SEQRES 14 B 289 GLY TYR ILE ALA PRO ALA MET ARG PHE LEU GLY ASP THR SEQRES 15 B 289 GLY ILE GLY GLY LYS SER THR TRP GLY ALA GLY LEU PHE SEQRES 16 B 289 GLU VAL GLU PHE HIS GLU MET LYS ILE ASP ALA PRO GLY SEQRES 17 B 289 SER GLU TYR SER VAL THR LEU SER ASN ALA LEU PRO THR SEQRES 18 B 289 LYS THR PRO VAL LEU TRP ARG LEU LEU ARG LYS GLY GLY SEQRES 19 B 289 TRP SER PHE GLY ARG ARG LYS PRO ARG MET THR PHE ILE SEQRES 20 B 289 ALA GLU GLY SER ILE VAL LYS ASN ASP PRO GLY GLY MET SEQRES 21 B 289 GLU ARG LEU GLU LEU GLY LEU SER HIS GLU VAL TYR VAL SEQRES 22 B 289 TYR GLY LEU THR PHE PRO LEU GLY VAL GLU LEU PRO GLU SEQRES 23 B 289 GLY LEU GLU HET NI A 801 1 HETNAM NI NICKEL (II) ION FORMUL 3 NI NI 2+ HELIX 1 AA1 GLU A 2 HIS A 14 1 13 HELIX 2 AA2 GLY A 17 ARG A 22 1 6 HELIX 3 AA3 ASP A 29 ASN A 44 1 16 HELIX 4 AA4 GLU A 49 SER A 54 1 6 HELIX 5 AA5 LEU A 55 SER A 57 5 3 HELIX 6 AA6 ASP A 68 LEU A 78 1 11 HELIX 7 AA7 THR A 86 SER A 105 1 20 HELIX 8 AA8 ARG A 150 SER A 166 1 17 HELIX 9 AA9 ARG A 171 THR A 184 1 14 HELIX 10 AB1 SER A 197 ALA A 215 1 19 HELIX 11 AB2 ARG A 226 GLU A 230 1 5 HELIX 12 AB3 GLY A 242 TYR A 248 1 7 HELIX 13 AB4 LEU A 256 LEU A 281 1 26 HELIX 14 AB5 THR A 284 ALA A 286 5 3 HELIX 15 AB6 THR A 303 GLU A 326 1 24 HELIX 16 AB7 SER A 339 GLY A 344 5 6 HELIX 17 AB8 LEU A 351 LEU A 368 1 18 HELIX 18 AB9 ASN A 417 ASN A 425 1 9 HELIX 19 AC1 THR A 501 ALA A 508 1 8 HELIX 20 AC2 ARG A 524 SER A 530 1 7 HELIX 21 AC3 SER A 534 TYR A 552 1 19 HELIX 22 AC4 TYR A 552 GLY A 559 1 8 HELIX 23 AC5 PHE A 561 GLY A 566 1 6 HELIX 24 AC6 TRP A 596 THR A 614 1 19 HELIX 25 AC7 PRO A 632 GLU A 650 1 19 HELIX 26 AC8 TRP A 674 ALA A 685 1 12 HELIX 27 AC9 LYS A 703 ASP A 719 1 17 HELIX 28 AD1 VAL A 723 LEU A 733 1 11 HELIX 29 AD2 PHE A 742 VAL A 746 5 5 HELIX 30 AD3 ASP A 749 ARG A 755 1 7 HELIX 31 AD4 GLN A 759 TRP A 763 5 5 HELIX 32 AD5 VAL A 764 VAL A 775 1 12 HELIX 33 AD6 ARG B 20 HIS B 36 1 17 HELIX 34 AD7 GLY B 37 GLY B 50 1 14 HELIX 35 AD8 PRO B 70 LEU B 77 5 8 HELIX 36 AD9 GLU B 86 ALA B 99 1 14 HELIX 37 AE1 LEU B 104 ARG B 112 1 9 HELIX 38 AE2 PRO B 164 TYR B 171 1 8 HELIX 39 AE3 TYR B 171 ASP B 181 1 11 SHEET 1 AA1 4 VAL A 288 ALA A 292 0 SHEET 2 AA1 4 HIS A 295 GLN A 301 -1 O HIS A 295 N ALA A 292 SHEET 3 AA1 4 PHE A 233 SER A 241 -1 N ILE A 236 O ILE A 298 SHEET 4 AA1 4 TYR A 330 VAL A 338 -1 O TYR A 330 N SER A 241 SHEET 1 AA2 5 VAL A 444 GLU A 445 0 SHEET 2 AA2 5 GLY A 450 LEU A 455 -1 O PHE A 451 N VAL A 444 SHEET 3 AA2 5 LEU A 429 THR A 435 -1 N GLY A 433 O VAL A 452 SHEET 4 AA2 5 GLN A 464 LYS A 468 -1 O LYS A 468 N LEU A 430 SHEET 5 AA2 5 GLN A 481 TYR A 485 1 O GLN A 481 N ILE A 465 SHEET 1 AA3 6 ILE A 580 TYR A 584 0 SHEET 2 AA3 6 PHE A 591 ALA A 595 -1 O VAL A 593 N VAL A 581 SHEET 3 AA3 6 LEU A 515 VAL A 522 -1 N MET A 518 O ILE A 592 SHEET 4 AA3 6 LEU A 620 PHE A 627 -1 O GLY A 623 N LYS A 519 SHEET 5 AA3 6 ARG A 654 PHE A 656 1 O PHE A 656 N VAL A 622 SHEET 6 AA3 6 TYR A 672 GLU A 673 -1 O TYR A 672 N VAL A 655 SHEET 1 AA4 2 TYR A 689 GLY A 691 0 SHEET 2 AA4 2 ARG A 694 LEU A 695 -1 O ARG A 694 N GLY A 691 SHEET 1 AA5 5 ARG B 53 ILE B 54 0 SHEET 2 AA5 5 VAL B 157 SER B 162 -1 O SER B 162 N ARG B 53 SHEET 3 AA5 5 PHE B 58 SER B 61 -1 N PHE B 58 O TYR B 158 SHEET 4 AA5 5 THR B 64 PRO B 68 -1 O THR B 64 N SER B 61 SHEET 5 AA5 5 TYR B 101 ASP B 103 -1 O LEU B 102 N LEU B 67 SHEET 1 AA6 4 ARG B 53 ILE B 54 0 SHEET 2 AA6 4 VAL B 157 SER B 162 -1 O SER B 162 N ARG B 53 SHEET 3 AA6 4 LYS B 3 ILE B 10 -1 N LEU B 9 O VAL B 157 SHEET 4 AA6 4 GLU B 196 LYS B 203 -1 O MET B 202 N PHE B 4 SHEET 1 AA7 2 ARG B 126 VAL B 127 0 SHEET 2 AA7 2 GLU B 148 ILE B 149 -1 O GLU B 148 N VAL B 127 SHEET 1 AA8 3 ILE B 252 VAL B 253 0 SHEET 2 AA8 3 SER B 212 THR B 214 -1 N SER B 212 O VAL B 253 SHEET 3 AA8 3 PRO B 279 GLY B 281 -1 O LEU B 280 N VAL B 213 SHEET 1 AA9 2 LEU B 229 ARG B 231 0 SHEET 2 AA9 2 THR B 245 ILE B 247 -1 O PHE B 246 N LEU B 230 SHEET 1 AB1 2 GLY B 258 LEU B 263 0 SHEET 2 AB1 2 VAL B 271 LEU B 276 -1 O VAL B 273 N GLU B 261 SSBOND 1 CYS A 217 CYS A 227 1555 1555 2.02 LINK NE2 HIS A 30 NI NI A 801 1555 1555 2.18 SITE 1 AC1 3 HIS A 14 ASP A 15 HIS A 30 CRYST1 154.284 154.284 182.418 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006482 0.003742 0.000000 0.00000 SCALE2 0.000000 0.007484 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005482 0.00000