HEADER TRANSFERASE 12-MAR-19 6O93 TITLE D-ALANYL TRANSFERASE DLTD FROM ENTEROCOCCUS FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-ALANYL TRANSFERASE DLTD; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 31-424; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS (STRAIN ATCC 700802 / SOURCE 3 V583); SOURCE 4 ORGANISM_TAXID: 226185; SOURCE 5 STRAIN: ATCC 700802 / V583; SOURCE 6 ATCC: 700802; SOURCE 7 GENE: DLTD, EF_2746; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PRSF-NT KEYWDS D-ALANINE, D-ALANYLATION, LIPOTEICHOIC ACID, LTA, D-ALANYL KEYWDS 2 LIPOTEICHOIC ACID, CELL WALL, GRAM-POSITIVE BACTERIA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SHAKHASHIRO,K.V.KOROTKOV REVDAT 3 11-OCT-23 6O93 1 REMARK REVDAT 2 01-JAN-20 6O93 1 REMARK REVDAT 1 27-MAR-19 6O93 0 JRNL AUTH M.SHAKHASHIRO,Z.A.WILLIAMSON,N.KOROTKOVA,K.V.KOROTKOV JRNL TITL D-ALANYL TRANSFERASE DLTD FROM ENTEROCOCCUS FAECALIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3139 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.260 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 31721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.230 REMARK 3 FREE R VALUE TEST SET COUNT : 1660 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9726 - 6.0984 0.89 2436 140 0.1839 0.1733 REMARK 3 2 6.0984 - 4.8422 0.90 2505 117 0.1552 0.2015 REMARK 3 3 4.8422 - 4.2306 0.91 2530 108 0.1288 0.1880 REMARK 3 4 4.2306 - 3.8440 0.92 2516 132 0.1328 0.1392 REMARK 3 5 3.8440 - 3.5686 0.92 2492 160 0.1477 0.1804 REMARK 3 6 3.5686 - 3.3583 0.92 2497 158 0.1722 0.2313 REMARK 3 7 3.3583 - 3.1901 0.93 2561 132 0.1771 0.2219 REMARK 3 8 3.1901 - 3.0513 0.93 2564 138 0.1824 0.2192 REMARK 3 9 3.0513 - 2.9338 0.93 2507 163 0.1939 0.2503 REMARK 3 10 2.9338 - 2.8326 0.94 2582 132 0.2046 0.2509 REMARK 3 11 2.8326 - 2.7441 0.94 2563 149 0.1984 0.2240 REMARK 3 12 2.7441 - 2.6656 0.94 2530 156 0.2033 0.2513 REMARK 3 13 2.6656 - 2.5955 0.94 2603 142 0.1932 0.2675 REMARK 3 14 2.5955 - 2.5321 0.94 2587 142 0.2044 0.2215 REMARK 3 15 2.5321 - 2.4746 0.95 2598 122 0.1983 0.2196 REMARK 3 16 2.4746 - 2.4219 0.95 2585 142 0.2161 0.2313 REMARK 3 17 2.4219 - 2.3735 0.94 2594 143 0.2244 0.2262 REMARK 3 18 2.3735 - 2.3287 0.95 2616 136 0.2224 0.2567 REMARK 3 19 2.3287 - 2.2871 0.95 2583 133 0.2235 0.2696 REMARK 3 20 2.2871 - 2.2483 0.95 2624 144 0.2405 0.2711 REMARK 3 21 2.2483 - 2.2121 0.95 2615 150 0.2510 0.3004 REMARK 3 22 2.2121 - 2.1780 0.79 2137 144 0.2950 0.3090 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3303 REMARK 3 ANGLE : 0.450 4462 REMARK 3 CHIRALITY : 0.037 469 REMARK 3 PLANARITY : 0.003 577 REMARK 3 DIHEDRAL : 12.408 1980 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1598 -21.8698 15.8243 REMARK 3 T TENSOR REMARK 3 T11: 0.2278 T22: 0.1598 REMARK 3 T33: 0.1536 T12: -0.0279 REMARK 3 T13: 0.0246 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 4.5768 L22: 0.7374 REMARK 3 L33: 2.3149 L12: -0.3106 REMARK 3 L13: -1.5598 L23: 0.3489 REMARK 3 S TENSOR REMARK 3 S11: 0.1447 S12: -0.2620 S13: 0.4177 REMARK 3 S21: 0.1377 S22: -0.0258 S23: 0.0610 REMARK 3 S31: -0.1007 S32: -0.0459 S33: -0.0898 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3859 -32.5773 9.1626 REMARK 3 T TENSOR REMARK 3 T11: 0.1696 T22: 0.1606 REMARK 3 T33: 0.1036 T12: -0.0096 REMARK 3 T13: 0.0070 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.1353 L22: 2.0105 REMARK 3 L33: 0.4959 L12: 0.5593 REMARK 3 L13: -0.2061 L23: 0.0406 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.0255 S13: 0.0746 REMARK 3 S21: 0.0234 S22: -0.0367 S23: -0.0124 REMARK 3 S31: -0.0046 S32: -0.0018 S33: 0.0045 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7042 -32.0813 12.2751 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.1210 REMARK 3 T33: 0.1043 T12: 0.0210 REMARK 3 T13: -0.0075 T23: 0.0657 REMARK 3 L TENSOR REMARK 3 L11: 2.4105 L22: 2.0839 REMARK 3 L33: 0.6922 L12: 1.2834 REMARK 3 L13: 0.1038 L23: 0.4405 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: -0.0324 S13: 0.1469 REMARK 3 S21: 0.0874 S22: -0.0868 S23: 0.2057 REMARK 3 S31: 0.0058 S32: -0.1035 S33: 0.0257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0404 -28.0755 27.4809 REMARK 3 T TENSOR REMARK 3 T11: 0.3798 T22: 0.4339 REMARK 3 T33: 0.3771 T12: -0.0703 REMARK 3 T13: -0.1503 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.6907 L22: 6.3537 REMARK 3 L33: 2.6931 L12: -1.2386 REMARK 3 L13: 0.0449 L23: -1.6391 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: -0.4103 S13: 0.1664 REMARK 3 S21: 0.9199 S22: -0.1322 S23: -0.6637 REMARK 3 S31: 0.0291 S32: 0.3031 S33: 0.1129 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3913 -36.0861 8.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.1644 REMARK 3 T33: 0.1531 T12: -0.0181 REMARK 3 T13: 0.0600 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 2.7555 L22: 2.6442 REMARK 3 L33: 2.0031 L12: -1.1551 REMARK 3 L13: 0.7989 L23: -0.3258 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: -0.0866 S13: -0.0094 REMARK 3 S21: 0.1139 S22: -0.0091 S23: -0.2024 REMARK 3 S31: 0.0474 S32: 0.1285 S33: 0.0210 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 335 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0826 -26.2393 8.3443 REMARK 3 T TENSOR REMARK 3 T11: 0.1397 T22: 0.1794 REMARK 3 T33: 0.2383 T12: -0.0339 REMARK 3 T13: 0.0233 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 1.0755 L22: 2.0430 REMARK 3 L33: 1.3775 L12: 0.0501 REMARK 3 L13: -0.3648 L23: 0.3303 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: -0.0534 S13: 0.1250 REMARK 3 S21: 0.0139 S22: -0.0626 S23: -0.4088 REMARK 3 S31: -0.0395 S32: 0.1711 S33: -0.0085 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 424 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1855 -35.8577 -5.9756 REMARK 3 T TENSOR REMARK 3 T11: 0.2888 T22: 0.2403 REMARK 3 T33: 0.1523 T12: 0.0231 REMARK 3 T13: 0.0424 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 2.5813 L22: 1.0800 REMARK 3 L33: 1.7533 L12: -1.0072 REMARK 3 L13: -0.6205 L23: 0.2761 REMARK 3 S TENSOR REMARK 3 S11: 0.0201 S12: 0.2279 S13: 0.0343 REMARK 3 S21: -0.1095 S22: -0.0976 S23: -0.0836 REMARK 3 S31: -0.1410 S32: -0.1514 S33: 0.0617 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR: LIQUID NITROGEN REMARK 200 COOLED; SAGITALLY FOCUSING 2ND REMARK 200 CRYSTAL, ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR WATER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 26, 2018 REMARK 200 BUILT=20180808 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION JAN 26, 2018 REMARK 200 BUILT=20180808 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31722 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.178 REMARK 200 RESOLUTION RANGE LOW (A) : 45.962 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 6.934 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.85 REMARK 200 R MERGE FOR SHELL (I) : 0.83500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 3BMA REMARK 200 REMARK 200 REMARK: HEXAGONAL PRISM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA2HPO4-CITRIC ACID PH 4.2, 1.6 REMARK 280 M NA2HPO4, 0.4 M K2HPO4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 137.16667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.58333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 102.87500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 34.29167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 171.45833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 137.16667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 68.58333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 34.29167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 102.87500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 171.45833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 P PO4 A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 640 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 744 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 396 REMARK 465 SER A 397 REMARK 465 LYS A 398 REMARK 465 LYS A 399 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 72 -136.12 -140.22 REMARK 500 GLN A 105 -163.33 -108.59 REMARK 500 PHE A 134 56.84 -90.89 REMARK 500 ASP A 372 -124.02 -154.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 510 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 72 OG REMARK 620 2 GLU A 74 OE1 62.8 REMARK 620 3 SER A 130 OG 73.4 82.4 REMARK 620 4 PO4 A 505 O4 62.6 105.5 123.0 REMARK 620 5 HOH A 748 O 134.3 104.1 61.3 150.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 511 DBREF 6O93 A 31 424 UNP Q830N3 Q830N3_ENTFA 31 424 SEQADV 6O93 GLY A 27 UNP Q830N3 EXPRESSION TAG SEQADV 6O93 ALA A 28 UNP Q830N3 EXPRESSION TAG SEQADV 6O93 MET A 29 UNP Q830N3 EXPRESSION TAG SEQADV 6O93 ALA A 30 UNP Q830N3 EXPRESSION TAG SEQRES 1 A 398 GLY ALA MET ALA ILE ASN LEU THR SER GLU LYS THR LEU SEQRES 2 A 398 LYS GLU ALA SER THR SER MET ALA PRO ASN VAL LEU LYS SEQRES 3 A 398 GLY ASN VAL ILE LYS ASN LYS ALA VAL ALA SER GLY LYS SEQRES 4 A 398 TYR VAL PRO PHE PHE GLY SER SER GLU LEU SER ARG PHE SEQRES 5 A 398 SER ALA PHE HIS PRO SER VAL LEU SER GLU LYS TYR GLN SEQRES 6 A 398 ARG ASN TYR ARG PRO PHE LEU LEU GLY GLU ALA GLY THR SEQRES 7 A 398 GLN SER LEU THR GLN ALA MET VAL ILE HIS SER MET GLY SEQRES 8 A 398 ASP ALA ILE ALA ASN LYS LYS ALA VAL PHE ILE LEU SER SEQRES 9 A 398 PRO GLN TRP PHE VAL LYS LYS GLY VAL PRO ASN ASP SER SEQRES 10 A 398 PHE GLY ALA HIS TYR SER GLN LEU GLN THR TYR GLN TRP SEQRES 11 A 398 LEU ALA ASN LEU THR GLU LEU THR SER GLY ASP GLN TYR SEQRES 12 A 398 LEU ALA GLN ARG LEU THR LYS PHE PRO VAL VAL GLN LYS SEQRES 13 A 398 ASP LYS VAL LEU MET GLU THR LEU ALA ASN LEU GLN ALA SEQRES 14 A 398 GLY GLN LEU PRO GLN ARG SER GLN ARG ASP TYR PHE ILE SEQRES 15 A 398 MET ASN LEU ARG PHE LEU ASN ARG GLU ASP GLU LEU PHE SEQRES 16 A 398 SER GLN ILE GLY MET VAL SER ARG GLU PRO ILE VAL GLU SEQRES 17 A 398 LYS ASP MET LYS GLN LEU PRO ALA THR TYR ASN PHE ASN SEQRES 18 A 398 GLU LEU ASP GLN LEU ALA GLY LYS ILE ALA ALA LYS ALA SEQRES 19 A 398 ILE ASN ASN ASN LYS PHE GLU ILE SER ASN GLY PHE TYR SEQRES 20 A 398 ARG GLN ARG ILE LYS PRO VAL LEU PRO LYS LEU ALA HIS SEQRES 21 A 398 SER GLN LYS LYS TRP ASP TYR ARG PHE SER PRO GLU TYR SEQRES 22 A 398 GLY ASP PHE GLN ALA ALA LEU GLU GLN LEU ALA GLU LYS SEQRES 23 A 398 ASN VAL ASP VAL LEU PHE VAL ILE PRO PRO VAL ASN LYS SEQRES 24 A 398 ARG TRP SER ASP TYR THR GLY LEU SER GLN ASP MET LEU SEQRES 25 A 398 GLN GLN VAL ALA ARG LYS LEU LYS TYR GLN LEU GLN GLU SEQRES 26 A 398 GLN GLY PHE THR ASN ILE ALA ASP PHE SER THR CYS SER SEQRES 27 A 398 ASN GLU ARG TYR PHE MET ALA ASP THR ILE HIS LEU GLY SEQRES 28 A 398 TRP ARG GLY TRP LEU ALA VAL ASP ARG GLN VAL ASP GLU SEQRES 29 A 398 PHE MET LYS GLN PRO ALA SER LYS LYS LEU ALA TYR GLN SEQRES 30 A 398 ILE ASP ASP ARG PHE TYR GLN THR ASP TRP GLN GLN GLN SEQRES 31 A 398 ASN PRO LEU VAL LEU PRO GLN PHE HET GOL A 501 14 HET GOL A 502 14 HET GOL A 503 14 HET PO4 A 504 5 HET PO4 A 505 5 HET PO4 A 506 5 HET PO4 A 507 5 HET CL A 508 1 HET CL A 509 1 HET NA A 510 1 HET CL A 511 1 HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 PO4 4(O4 P 3-) FORMUL 9 CL 3(CL 1-) FORMUL 11 NA NA 1+ FORMUL 13 HOH *263(H2 O) HELIX 1 AA1 SER A 35 THR A 44 1 10 HELIX 2 AA2 ALA A 47 GLY A 53 1 7 HELIX 3 AA3 ASN A 54 SER A 63 1 10 HELIX 4 AA4 SER A 72 ARG A 77 5 6 HELIX 5 AA5 HIS A 82 TYR A 90 1 9 HELIX 6 AA6 GLN A 105 GLY A 117 1 13 HELIX 7 AA7 ASP A 118 ILE A 120 5 3 HELIX 8 AA8 SER A 130 PHE A 134 5 5 HELIX 9 AA9 PRO A 140 TYR A 148 1 9 HELIX 10 AB1 SER A 149 ASN A 159 1 11 HELIX 11 AB2 THR A 164 THR A 175 1 12 HELIX 12 AB3 PHE A 177 LYS A 182 1 6 HELIX 13 AB4 ASP A 183 ALA A 195 1 13 HELIX 14 AB5 GLN A 200 SER A 222 1 23 HELIX 15 AB6 ARG A 229 LYS A 238 1 10 HELIX 16 AB7 ASN A 245 ALA A 260 1 16 HELIX 17 AB8 SER A 269 ILE A 277 1 9 HELIX 18 AB9 VAL A 280 ALA A 285 1 6 HELIX 19 AC1 PRO A 297 LYS A 312 1 16 HELIX 20 AC2 ASN A 324 GLY A 332 1 9 HELIX 21 AC3 SER A 334 GLU A 351 1 18 HELIX 22 AC4 GLY A 377 GLN A 394 1 18 HELIX 23 AC5 ASP A 405 TYR A 409 5 5 HELIX 24 AC6 GLN A 410 GLN A 415 1 6 HELIX 25 AC7 ASN A 417 LEU A 421 5 5 SHEET 1 AA1 5 ARG A 95 LEU A 99 0 SHEET 2 AA1 5 TYR A 66 PHE A 70 1 N PHE A 69 O LEU A 99 SHEET 3 AA1 5 LYS A 124 ILE A 128 1 O ILE A 128 N PHE A 70 SHEET 4 AA1 5 ASP A 315 ILE A 320 1 O LEU A 317 N PHE A 127 SHEET 5 AA1 5 ILE A 357 ASP A 359 1 O ALA A 358 N PHE A 318 LINK OG SER A 72 NA NA A 510 1555 1555 2.81 LINK OE1 GLU A 74 NA NA A 510 1555 1555 2.47 LINK OG SER A 130 NA NA A 510 1555 1555 2.93 LINK O4 PO4 A 505 NA NA A 510 1555 1555 2.89 LINK NA NA A 510 O HOH A 748 1555 1555 3.16 SITE 1 AC1 4 VAL A 135 LYS A 136 TRP A 291 ASP A 292 SITE 1 AC2 6 ASN A 49 LYS A 182 ASP A 183 LYS A 184 SITE 2 AC2 6 VAL A 185 TYR A 206 SITE 1 AC3 7 SER A 202 GLN A 203 GLN A 340 ARG A 343 SITE 2 AC3 7 LEU A 419 HOH A 717 HOH A 727 SITE 1 AC4 5 ASN A 141 ASP A 142 HOH A 656 HOH A 715 SITE 2 AC4 5 HOH A 716 SITE 1 AC5 7 SER A 72 SER A 73 GLY A 103 TRP A 133 SITE 2 AC5 7 NA A 510 HOH A 604 HOH A 632 SITE 1 AC6 4 GLN A 288 TRP A 327 THR A 373 HOH A 627 SITE 1 AC7 5 GLN A 200 ARG A 201 SER A 334 ASP A 336 SITE 2 AC7 5 HOH A 639 SITE 1 AC8 1 ARG A 92 SITE 1 AC9 2 SER A 269 GLY A 271 SITE 1 AD1 5 SER A 72 SER A 73 GLU A 74 SER A 130 SITE 2 AD1 5 PO4 A 505 SITE 1 AD2 1 GLN A 335 CRYST1 102.750 102.750 205.750 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009732 0.005619 0.000000 0.00000 SCALE2 0.000000 0.011238 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004860 0.00000