HEADER SIGNALING PROTEIN 14-MAR-19 6O9S TITLE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS MECR1 ANTIBIOTIC-SENSOR TITLE 2 DOMAIN IN COMPLEX WITH AVIBACTAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHICILLIN RESISTANCE MECR1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MECR1, MECR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA-LACTAM ANTIBIOTIC SENSOR DOMAIN, ANTIBIOTIC COMPLEX, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.A.N.ALEXANDER,N.C.J.STRYNADKA REVDAT 3 11-OCT-23 6O9S 1 REMARK REVDAT 2 07-OCT-20 6O9S 1 JRNL REVDAT 1 10-JUN-20 6O9S 0 JRNL AUTH J.A.N.ALEXANDER,M.RADAEVA,D.T.KING,H.F.CHAMBERS,A.CHERKASOV, JRNL AUTH 2 S.S.CHATTERJEE,N.C.J.STRYNADKA JRNL TITL STRUCTURAL ANALYSIS OF AVIBACTAM-MEDIATED ACTIVATION OF THE JRNL TITL 2 BLA AND MEC DIVERGONS IN METHICILLIN-RESISTANT JRNL TITL 3 STAPHYLOCOCCUS AUREUS . JRNL REF J.BIOL.CHEM. V. 295 10870 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32518158 JRNL DOI 10.1074/JBC.RA120.013029 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 35297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1689 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9460 - 3.6396 0.99 3012 170 0.1630 0.1998 REMARK 3 2 3.6396 - 2.8890 1.00 2904 140 0.1577 0.2070 REMARK 3 3 2.8890 - 2.5239 1.00 2848 133 0.1582 0.1924 REMARK 3 4 2.5239 - 2.2931 1.00 2848 134 0.1472 0.2122 REMARK 3 5 2.2931 - 2.1288 1.00 2802 152 0.1413 0.1920 REMARK 3 6 2.1288 - 2.0033 1.00 2816 139 0.1458 0.1674 REMARK 3 7 2.0033 - 1.9029 1.00 2773 136 0.1440 0.1769 REMARK 3 8 1.9029 - 1.8201 1.00 2796 132 0.1489 0.1741 REMARK 3 9 1.8201 - 1.7500 1.00 2778 135 0.1622 0.1876 REMARK 3 10 1.7500 - 1.6896 1.00 2760 160 0.1693 0.1904 REMARK 3 11 1.6896 - 1.6368 0.99 2710 136 0.1947 0.2167 REMARK 3 12 1.6368 - 1.5900 0.92 2561 122 0.2161 0.2613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 340:350) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3649 76.8400 176.7434 REMARK 3 T TENSOR REMARK 3 T11: 0.2787 T22: 0.2594 REMARK 3 T33: 0.1396 T12: -0.0239 REMARK 3 T13: 0.0434 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 7.3408 L22: 3.2591 REMARK 3 L33: 3.7156 L12: 1.3389 REMARK 3 L13: -1.1587 L23: 0.8718 REMARK 3 S TENSOR REMARK 3 S11: 0.2173 S12: -1.2496 S13: -0.4198 REMARK 3 S21: 0.6447 S22: -0.0885 S23: 0.0570 REMARK 3 S31: 0.0335 S32: 0.2168 S33: -0.0564 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 351:363) REMARK 3 ORIGIN FOR THE GROUP (A): 47.5161 67.3025 162.4527 REMARK 3 T TENSOR REMARK 3 T11: 0.2023 T22: 0.1485 REMARK 3 T33: 0.2415 T12: -0.0245 REMARK 3 T13: 0.0348 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 4.6650 L22: 3.5461 REMARK 3 L33: 3.4448 L12: -0.5064 REMARK 3 L13: -0.8308 L23: 0.8347 REMARK 3 S TENSOR REMARK 3 S11: -0.1764 S12: -0.0123 S13: -0.3052 REMARK 3 S21: 0.0998 S22: 0.0619 S23: 0.0365 REMARK 3 S31: 0.1199 S32: -0.1681 S33: 0.0857 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 364:407) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6033 83.6291 165.6622 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1126 REMARK 3 T33: 0.1101 T12: 0.0030 REMARK 3 T13: 0.0029 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.8834 L22: 0.9448 REMARK 3 L33: 1.0213 L12: 0.5141 REMARK 3 L13: -0.3389 L23: 0.0379 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: -0.1277 S13: 0.0007 REMARK 3 S21: 0.1061 S22: -0.0095 S23: -0.0067 REMARK 3 S31: -0.0856 S32: 0.0243 S33: -0.0221 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 408:423) REMARK 3 ORIGIN FOR THE GROUP (A): 73.1918 89.4946 145.5650 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.2787 REMARK 3 T33: 0.1926 T12: -0.0240 REMARK 3 T13: 0.0235 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 5.2293 L22: 5.7179 REMARK 3 L33: 5.4886 L12: -2.3863 REMARK 3 L13: -1.9347 L23: 2.9513 REMARK 3 S TENSOR REMARK 3 S11: 0.3107 S12: 0.2192 S13: 0.0889 REMARK 3 S21: -0.6361 S22: -0.0272 S23: -0.4954 REMARK 3 S31: -0.3807 S32: 0.5357 S33: -0.2285 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 424:444) REMARK 3 ORIGIN FOR THE GROUP (A): 67.7590 86.5118 146.7285 REMARK 3 T TENSOR REMARK 3 T11: 0.2161 T22: 0.2226 REMARK 3 T33: 0.1671 T12: 0.0154 REMARK 3 T13: -0.0106 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 3.7140 L22: 3.8286 REMARK 3 L33: 2.5207 L12: -1.6408 REMARK 3 L13: -0.7470 L23: 0.3271 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: 0.4115 S13: -0.2102 REMARK 3 S21: -0.3773 S22: -0.1603 S23: 0.1496 REMARK 3 S31: -0.1569 S32: 0.1554 S33: -0.0021 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 445:452) REMARK 3 ORIGIN FOR THE GROUP (A): 77.1244 89.9311 158.7044 REMARK 3 T TENSOR REMARK 3 T11: 0.2407 T22: 0.2756 REMARK 3 T33: 0.2159 T12: -0.0544 REMARK 3 T13: 0.0105 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 7.0873 L22: 6.4761 REMARK 3 L33: 9.7316 L12: 3.1514 REMARK 3 L13: 4.4845 L23: 2.4723 REMARK 3 S TENSOR REMARK 3 S11: -0.0362 S12: 0.1348 S13: 0.0246 REMARK 3 S21: 0.1576 S22: 0.2225 S23: -0.5469 REMARK 3 S31: -0.3489 S32: 0.6301 S33: -0.1576 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 453:463) REMARK 3 ORIGIN FOR THE GROUP (A): 71.8075 90.5696 170.2121 REMARK 3 T TENSOR REMARK 3 T11: 0.2159 T22: 0.2268 REMARK 3 T33: 0.1686 T12: -0.0754 REMARK 3 T13: -0.0266 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 2.1008 L22: 6.5730 REMARK 3 L33: 7.6502 L12: 0.5282 REMARK 3 L13: -2.4711 L23: -0.4291 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.4079 S13: 0.2396 REMARK 3 S21: 0.2822 S22: -0.0538 S23: -0.4095 REMARK 3 S31: -0.2145 S32: 0.6440 S33: -0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 464:491) REMARK 3 ORIGIN FOR THE GROUP (A): 67.9187 80.1773 166.5678 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.1387 REMARK 3 T33: 0.1270 T12: -0.0119 REMARK 3 T13: -0.0145 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 5.8599 L22: 2.9925 REMARK 3 L33: 3.8886 L12: -0.2998 REMARK 3 L13: -0.5936 L23: 0.4070 REMARK 3 S TENSOR REMARK 3 S11: 0.1042 S12: -0.1252 S13: -0.0763 REMARK 3 S21: 0.0739 S22: -0.0386 S23: -0.2625 REMARK 3 S31: 0.0318 S32: 0.3992 S33: -0.0653 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 492:504) REMARK 3 ORIGIN FOR THE GROUP (A): 57.5100 94.6186 167.0996 REMARK 3 T TENSOR REMARK 3 T11: 0.2669 T22: 0.1599 REMARK 3 T33: 0.2133 T12: -0.0265 REMARK 3 T13: 0.0030 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 8.4411 L22: 6.8011 REMARK 3 L33: 4.7536 L12: 0.2436 REMARK 3 L13: 1.8663 L23: 2.2083 REMARK 3 S TENSOR REMARK 3 S11: -0.1868 S12: -0.3306 S13: 0.6999 REMARK 3 S21: 0.1622 S22: 0.1020 S23: 0.5027 REMARK 3 S31: -0.5829 S32: 0.1892 S33: 0.0715 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 505:517) REMARK 3 ORIGIN FOR THE GROUP (A): 57.3266 95.2107 155.4913 REMARK 3 T TENSOR REMARK 3 T11: 0.2590 T22: 0.1555 REMARK 3 T33: 0.2079 T12: 0.0407 REMARK 3 T13: 0.0175 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 4.6559 L22: 4.1333 REMARK 3 L33: 6.9580 L12: 3.6133 REMARK 3 L13: 2.6709 L23: 4.5930 REMARK 3 S TENSOR REMARK 3 S11: -0.1147 S12: -0.1186 S13: 0.4462 REMARK 3 S21: -0.0278 S22: -0.0145 S23: 0.2917 REMARK 3 S31: -0.4593 S32: -0.0260 S33: 0.1492 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 518:523) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3267 91.2474 150.7232 REMARK 3 T TENSOR REMARK 3 T11: 0.3248 T22: 0.5974 REMARK 3 T33: 0.2906 T12: 0.1459 REMARK 3 T13: -0.1098 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.6508 L22: 6.0112 REMARK 3 L33: 5.8959 L12: -2.4591 REMARK 3 L13: -4.2609 L23: -0.8126 REMARK 3 S TENSOR REMARK 3 S11: 0.1260 S12: 0.5960 S13: 0.5548 REMARK 3 S21: -0.8176 S22: -0.2197 S23: 0.9903 REMARK 3 S31: -0.8093 S32: -1.5625 S33: 0.1087 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 524:541) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4083 74.4951 155.5905 REMARK 3 T TENSOR REMARK 3 T11: 0.1175 T22: 0.1448 REMARK 3 T33: 0.1328 T12: 0.0076 REMARK 3 T13: 0.0077 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 6.6633 L22: 8.0639 REMARK 3 L33: 2.7310 L12: -5.9779 REMARK 3 L13: 0.9898 L23: -0.5971 REMARK 3 S TENSOR REMARK 3 S11: 0.2308 S12: 0.2771 S13: -0.1781 REMARK 3 S21: -0.0783 S22: -0.1961 S23: -0.1004 REMARK 3 S31: 0.1500 S32: 0.1221 S33: -0.0188 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 542:562) REMARK 3 ORIGIN FOR THE GROUP (A): 50.3006 83.3183 161.1551 REMARK 3 T TENSOR REMARK 3 T11: 0.1375 T22: 0.1176 REMARK 3 T33: 0.1283 T12: 0.0023 REMARK 3 T13: 0.0168 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 3.6090 L22: 3.4032 REMARK 3 L33: 1.5674 L12: -1.9622 REMARK 3 L13: -0.7717 L23: 1.0366 REMARK 3 S TENSOR REMARK 3 S11: 0.1230 S12: 0.0437 S13: 0.1136 REMARK 3 S21: -0.0024 S22: -0.1358 S23: -0.0113 REMARK 3 S31: -0.1088 S32: -0.1290 S33: 0.0291 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 563:576) REMARK 3 ORIGIN FOR THE GROUP (A): 54.9120 71.1272 154.0507 REMARK 3 T TENSOR REMARK 3 T11: 0.1804 T22: 0.1462 REMARK 3 T33: 0.2131 T12: 0.0025 REMARK 3 T13: -0.0190 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 8.9140 L22: 2.3076 REMARK 3 L33: 3.8191 L12: -4.5275 REMARK 3 L13: -0.0268 L23: 0.1509 REMARK 3 S TENSOR REMARK 3 S11: 0.2451 S12: 0.2710 S13: -0.7105 REMARK 3 S21: -0.2742 S22: -0.1905 S23: 0.3086 REMARK 3 S31: 0.3273 S32: 0.0604 S33: -0.0630 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 577:585) REMARK 3 ORIGIN FOR THE GROUP (A): 41.3352 78.9193 156.6974 REMARK 3 T TENSOR REMARK 3 T11: 0.1997 T22: 0.2692 REMARK 3 T33: 0.3964 T12: -0.0283 REMARK 3 T13: -0.0363 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 2.3506 L22: 2.3732 REMARK 3 L33: 8.5317 L12: -2.1860 REMARK 3 L13: 1.4549 L23: 0.1751 REMARK 3 S TENSOR REMARK 3 S11: -0.2230 S12: 0.0169 S13: 0.1522 REMARK 3 S21: -0.4397 S22: -0.3735 S23: 1.1697 REMARK 3 S31: -0.2163 S32: -0.6791 S33: 0.4931 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35378 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.590 REMARK 200 RESOLUTION RANGE LOW (A) : 45.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 2IWB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M AMMONIUM SULPHATE, 50 MM HEPES REMARK 280 PH 7.5, 1 MM OXACILLIN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.80100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.33600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.33600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.90050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.33600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.33600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.70150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.33600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.33600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.90050 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.33600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.33600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.70150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.80100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 331 REMARK 465 HIS A 332 REMARK 465 MET A 333 REMARK 465 SER A 334 REMARK 465 ALA A 335 REMARK 465 HIS A 336 REMARK 465 VAL A 337 REMARK 465 GLN A 338 REMARK 465 GLN A 339 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 454 O HOH A 701 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 400 CG - SD - CE ANGL. DEV. = 23.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 379 73.76 67.75 REMARK 500 ASN A 390 -129.68 45.12 REMARK 500 LYS A 418 3.32 81.36 REMARK 500 ASN A 427 59.95 -93.24 REMARK 500 SER A 480 -143.88 -140.31 REMARK 500 HIS A 502 48.36 -92.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NXL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 DBREF 6O9S A 334 585 UNP P0A0B1 MECR_STAAU 334 585 SEQADV 6O9S GLY A 331 UNP P0A0B1 EXPRESSION TAG SEQADV 6O9S HIS A 332 UNP P0A0B1 EXPRESSION TAG SEQADV 6O9S MET A 333 UNP P0A0B1 EXPRESSION TAG SEQRES 1 A 255 GLY HIS MET SER ALA HIS VAL GLN GLN ASP LYS TYR GLU SEQRES 2 A 255 THR ASN VAL SER TYR LYS LYS LEU ASN GLN LEU ALA PRO SEQRES 3 A 255 TYR PHE LYS GLY PHE ASP GLY SER PHE VAL LEU TYR ASN SEQRES 4 A 255 GLU ARG GLU GLN ALA TYR SER ILE TYR ASN GLU PRO GLU SEQRES 5 A 255 SER LYS GLN ARG TYR SER PRO ASN SER THR TYR LYS ILE SEQRES 6 A 255 TYR LEU ALA LEU MET ALA PHE ASP GLN ASN LEU LEU SER SEQRES 7 A 255 LEU ASN HIS THR GLU GLN GLN TRP ASP LYS HIS GLN TYR SEQRES 8 A 255 PRO PHE LYS GLU TRP ASN GLN ASP GLN ASN LEU ASN SER SEQRES 9 A 255 SER MET LYS TYR SER VAL ASN TRP TYR TYR GLU ASN LEU SEQRES 10 A 255 ASN LYS HIS LEU ARG GLN ASP GLU VAL LYS SER TYR LEU SEQRES 11 A 255 ASP LEU ILE GLU TYR GLY ASN GLU GLU ILE SER GLY ASN SEQRES 12 A 255 GLU ASN TYR TRP ASN GLU SER SER LEU LYS ILE SER ALA SEQRES 13 A 255 ILE GLU GLN VAL ASN LEU LEU LYS ASN MET LYS GLN HIS SEQRES 14 A 255 ASN MET HIS PHE ASP ASN LYS ALA ILE GLU LYS VAL GLU SEQRES 15 A 255 ASN SER MET THR LEU LYS GLN LYS ASP THR TYR LYS TYR SEQRES 16 A 255 VAL GLY LYS THR GLY THR GLY ILE VAL ASN HIS LYS GLU SEQRES 17 A 255 ALA ASN GLY TRP PHE VAL GLY TYR VAL GLU THR LYS ASP SEQRES 18 A 255 ASN THR TYR TYR PHE ALA THR HIS LEU LYS GLY GLU ASP SEQRES 19 A 255 ASN ALA ASN GLY GLU LYS ALA GLN GLN ILE SER GLU ARG SEQRES 20 A 255 ILE LEU LYS GLU MET GLU LEU ILE HET NXL A 601 28 HET SO4 A 602 5 HETNAM NXL (2S,5R)-1-FORMYL-5-[(SULFOOXY)AMINO]PIPERIDINE-2- HETNAM 2 NXL CARBOXAMIDE HETNAM SO4 SULFATE ION HETSYN NXL AVIBACTAM, BOUND FORM; NXL104, BOUND FORM FORMUL 2 NXL C7 H13 N3 O6 S FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *159(H2 O) HELIX 1 AA1 ASN A 352 LYS A 359 5 8 HELIX 2 AA2 ASN A 379 GLN A 385 1 7 HELIX 3 AA3 PRO A 389 THR A 392 5 4 HELIX 4 AA4 TYR A 393 GLN A 404 1 12 HELIX 5 AA5 PHE A 423 ASN A 427 5 5 HELIX 6 AA6 ASN A 431 TYR A 438 1 8 HELIX 7 AA7 VAL A 440 HIS A 450 1 11 HELIX 8 AA8 ARG A 452 GLU A 464 1 13 HELIX 9 AA9 SER A 485 GLN A 498 1 14 HELIX 10 AB1 ASP A 504 MET A 515 1 12 HELIX 11 AB2 ASN A 567 MET A 582 1 16 SHEET 1 AA1 7 TYR A 348 LYS A 350 0 SHEET 2 AA1 7 ALA A 374 TYR A 378 1 O TYR A 375 N LYS A 349 SHEET 3 AA1 7 ASP A 362 ASN A 369 -1 N ASN A 369 O ALA A 374 SHEET 4 AA1 7 THR A 553 LYS A 561 -1 O TYR A 555 N TYR A 368 SHEET 5 AA1 7 LYS A 537 THR A 549 -1 N VAL A 547 O TYR A 554 SHEET 6 AA1 7 TYR A 523 VAL A 534 -1 N LYS A 524 O GLU A 548 SHEET 7 AA1 7 THR A 516 GLN A 519 -1 N LYS A 518 O TYR A 525 LINK OG SER A 391 CAN NXL A 601 1555 1555 1.35 SITE 1 AC1 10 ASN A 390 SER A 391 SER A 439 ASN A 441 SITE 2 AC1 10 ASN A 478 LYS A 528 THR A 529 GLY A 530 SITE 3 AC1 10 THR A 531 HOH A 790 SITE 1 AC2 5 ASN A 369 ARG A 371 ASN A 552 TYR A 554 SITE 2 AC2 5 HOH A 771 CRYST1 58.672 58.672 147.602 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017044 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017044 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006775 0.00000