HEADER TOXIN 20-MAR-19 6OBC TITLE RICIN A CHAIN BOUND TO CAMELID COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN A CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TOXIN CATALYTIC SUBUNIT, RESIDUES 40-298; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VHH ANTIBODY; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_COMMON: ALPACA; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH REVDAT 2 14-OCT-20 6OBC 1 JRNL REVDAT 1 01-APR-20 6OBC 0 JRNL AUTH M.J.RUDOLPH,T.F.CZAJKA,S.A.DAVIS,C.M.THI NGUYEN,X.P.LI, JRNL AUTH 2 N.E.TUMER,D.J.VANCE,N.J.MANTIS JRNL TITL INTRACELLULAR NEUTRALIZATION OF RICIN TOXIN BY SINGLE-DOMAIN JRNL TITL 2 ANTIBODIES TARGETING THE ACTIVE SITE. JRNL REF J.MOL.BIOL. V. 432 1109 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 31931008 JRNL DOI 10.1016/J.JMB.2020.01.006 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 35816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1857 - 4.0326 0.99 2915 171 0.1631 0.1888 REMARK 3 2 4.0326 - 3.2011 0.98 2864 146 0.1567 0.1962 REMARK 3 3 3.2011 - 2.7966 0.97 2870 137 0.1709 0.2211 REMARK 3 4 2.7966 - 2.5409 0.97 2839 146 0.1798 0.2177 REMARK 3 5 2.5409 - 2.3588 0.97 2873 146 0.1766 0.2169 REMARK 3 6 2.3588 - 2.2197 0.97 2894 119 0.1795 0.2538 REMARK 3 7 2.2197 - 2.1086 0.97 2844 127 0.1875 0.2579 REMARK 3 8 2.1086 - 2.0168 0.96 2814 165 0.2073 0.2447 REMARK 3 9 2.0168 - 1.9392 0.96 2809 145 0.2294 0.2633 REMARK 3 10 1.9392 - 1.8722 0.95 2837 152 0.2482 0.3240 REMARK 3 11 1.8722 - 1.8137 0.95 2791 140 0.2844 0.3139 REMARK 3 12 1.8137 - 1.7619 0.94 2730 142 0.3082 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 47.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.22260 REMARK 3 B22 (A**2) : 11.69570 REMARK 3 B33 (A**2) : -4.47310 REMARK 3 B12 (A**2) : 2.42600 REMARK 3 B13 (A**2) : -2.90320 REMARK 3 B23 (A**2) : -10.65070 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3054 REMARK 3 ANGLE : 0.973 4149 REMARK 3 CHIRALITY : 0.067 455 REMARK 3 PLANARITY : 0.005 549 REMARK 3 DIHEDRAL : 13.441 1117 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:56) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2158 15.5023 32.7620 REMARK 3 T TENSOR REMARK 3 T11: 0.1926 T22: 0.2500 REMARK 3 T33: 0.2564 T12: 0.0394 REMARK 3 T13: 0.0032 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 0.6126 L22: 0.4447 REMARK 3 L33: 0.7720 L12: 0.3994 REMARK 3 L13: 0.2851 L23: 0.1270 REMARK 3 S TENSOR REMARK 3 S11: -0.0407 S12: -0.1701 S13: 0.2116 REMARK 3 S21: -0.0306 S22: -0.0445 S23: 0.0734 REMARK 3 S31: -0.0680 S32: -0.0535 S33: 0.0856 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 57:122) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9097 17.3236 33.9398 REMARK 3 T TENSOR REMARK 3 T11: 0.1580 T22: 0.1533 REMARK 3 T33: 0.2071 T12: 0.0150 REMARK 3 T13: 0.0051 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 2.9577 L22: 2.3298 REMARK 3 L33: 3.4195 L12: -0.0698 REMARK 3 L13: 0.3427 L23: -1.0130 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.0547 S13: 0.2212 REMARK 3 S21: -0.0134 S22: 0.0189 S23: -0.0953 REMARK 3 S31: -0.3152 S32: 0.1508 S33: -0.0727 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 123:263) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3482 0.9499 32.0403 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.1275 REMARK 3 T33: 0.1593 T12: 0.0104 REMARK 3 T13: 0.0179 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.8253 L22: 0.9240 REMARK 3 L33: 2.1103 L12: 0.5270 REMARK 3 L13: 1.0606 L23: 0.6829 REMARK 3 S TENSOR REMARK 3 S11: 0.0512 S12: -0.0610 S13: -0.1366 REMARK 3 S21: 0.0887 S22: -0.0250 S23: 0.0340 REMARK 3 S31: 0.1616 S32: -0.0814 S33: -0.0343 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:40) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6168 -10.8043 8.4465 REMARK 3 T TENSOR REMARK 3 T11: 0.1481 T22: 0.2535 REMARK 3 T33: 0.1773 T12: 0.0331 REMARK 3 T13: -0.0049 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 2.2490 L22: 3.4108 REMARK 3 L33: 4.5302 L12: 1.2172 REMARK 3 L13: 0.8609 L23: 2.3280 REMARK 3 S TENSOR REMARK 3 S11: -0.0436 S12: 0.1173 S13: 0.1302 REMARK 3 S21: -0.1549 S22: 0.0877 S23: -0.0477 REMARK 3 S31: -0.1097 S32: 0.0352 S33: -0.0488 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 41:52) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0381 -12.8567 13.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.4875 REMARK 3 T33: 0.2852 T12: 0.0561 REMARK 3 T13: -0.0141 T23: -0.1459 REMARK 3 L TENSOR REMARK 3 L11: 4.0605 L22: 0.9050 REMARK 3 L33: 7.1180 L12: 0.1524 REMARK 3 L13: 5.2108 L23: 0.7060 REMARK 3 S TENSOR REMARK 3 S11: -0.2188 S12: -0.0665 S13: 0.3330 REMARK 3 S21: -0.1009 S22: -0.5349 S23: 0.4477 REMARK 3 S31: -0.2240 S32: -1.0927 S33: 0.6410 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 53:59) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7726 -13.2966 23.4845 REMARK 3 T TENSOR REMARK 3 T11: 0.4229 T22: 0.5861 REMARK 3 T33: 0.3461 T12: -0.0048 REMARK 3 T13: -0.0505 T23: -0.1791 REMARK 3 L TENSOR REMARK 3 L11: 6.2298 L22: 6.4548 REMARK 3 L33: 4.0760 L12: 4.9694 REMARK 3 L13: 1.8171 L23: -1.5215 REMARK 3 S TENSOR REMARK 3 S11: 0.6238 S12: -1.3043 S13: 0.6117 REMARK 3 S21: 1.7018 S22: -0.3663 S23: -0.2406 REMARK 3 S31: -0.3056 S32: -0.2336 S33: -0.2149 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 60:72) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1744 -20.0469 15.3854 REMARK 3 T TENSOR REMARK 3 T11: 0.3275 T22: 0.3727 REMARK 3 T33: 0.3097 T12: -0.0053 REMARK 3 T13: -0.0078 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 6.1354 L22: 7.0426 REMARK 3 L33: 7.8711 L12: 3.9784 REMARK 3 L13: 0.6293 L23: 0.5561 REMARK 3 S TENSOR REMARK 3 S11: 0.7724 S12: -1.1061 S13: -0.2956 REMARK 3 S21: 0.7838 S22: -0.7307 S23: 0.2515 REMARK 3 S31: 0.6487 S32: -0.4128 S33: -0.0942 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 73:101) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9727 -13.2028 10.3646 REMARK 3 T TENSOR REMARK 3 T11: 0.1683 T22: 0.2241 REMARK 3 T33: 0.1475 T12: -0.0081 REMARK 3 T13: -0.0016 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.4155 L22: 4.0688 REMARK 3 L33: 4.5857 L12: 0.1581 REMARK 3 L13: 1.0012 L23: 3.3530 REMARK 3 S TENSOR REMARK 3 S11: 0.1220 S12: 0.1579 S13: -0.1521 REMARK 3 S21: 0.0139 S22: 0.0283 S23: -0.1355 REMARK 3 S31: 0.1418 S32: 0.1120 S33: -0.0940 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 102:119) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2805 -6.6568 8.8367 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.1864 REMARK 3 T33: 0.1895 T12: 0.0170 REMARK 3 T13: -0.0231 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.2444 L22: 7.8949 REMARK 3 L33: 7.1346 L12: 2.0079 REMARK 3 L13: 1.6277 L23: 6.3800 REMARK 3 S TENSOR REMARK 3 S11: -0.1173 S12: 0.1449 S13: -0.0106 REMARK 3 S21: -0.6724 S22: -0.0468 S23: 0.1443 REMARK 3 S31: -0.3991 S32: -0.1051 S33: 0.1062 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OBC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240374. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35851 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.64600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS (PH 7.0), 200 MM CALCIUM REMARK 280 ACETATE, AND 20% PEG 3,000, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 568 O HOH A 577 1.82 REMARK 500 O HOH A 490 O HOH A 576 1.84 REMARK 500 O HOH B 332 O HOH B 371 1.85 REMARK 500 O HOH A 566 O HOH B 307 1.86 REMARK 500 O HOH A 431 O HOH A 553 1.90 REMARK 500 O HOH A 498 O HOH A 584 1.90 REMARK 500 O HOH A 493 O HOH B 379 1.97 REMARK 500 O HOH B 337 O HOH B 366 1.98 REMARK 500 O HOH B 343 O HOH B 375 1.99 REMARK 500 O HOH A 412 O HOH A 448 2.02 REMARK 500 O HOH B 339 O HOH B 369 2.06 REMARK 500 O HOH A 421 O HOH A 482 2.07 REMARK 500 O HOH B 354 O HOH B 367 2.08 REMARK 500 O HOH A 513 O HOH A 554 2.13 REMARK 500 O HOH A 474 O HOH A 510 2.14 REMARK 500 O HOH A 547 O HOH B 328 2.14 REMARK 500 O HOH B 333 O HOH B 357 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 420 O HOH A 553 1655 1.96 REMARK 500 OD2 ASP A 244 O2 EDO B 201 1455 2.07 REMARK 500 O HOH A 429 O HOH A 507 1455 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 202 DBREF 6OBC A 5 263 UNP P02879 RICI_RICCO 40 298 DBREF 6OBC B 1 119 PDB 6OBC 6OBC 1 119 SEQRES 1 A 259 GLN TYR PRO ILE ILE ASN PHE THR THR ALA GLY ALA THR SEQRES 2 A 259 VAL GLN SER TYR THR ASN PHE ILE ARG ALA VAL ARG GLY SEQRES 3 A 259 ARG LEU THR THR GLY ALA ASP VAL ARG HIS GLU ILE PRO SEQRES 4 A 259 VAL LEU PRO ASN ARG VAL GLY LEU PRO ILE ASN GLN ARG SEQRES 5 A 259 PHE ILE LEU VAL GLU LEU SER ASN HIS ALA GLU LEU SER SEQRES 6 A 259 VAL THR LEU ALA LEU ASP VAL THR ASN ALA TYR VAL VAL SEQRES 7 A 259 GLY TYR ARG ALA GLY ASN SER ALA TYR PHE PHE HIS PRO SEQRES 8 A 259 ASP ASN GLN GLU ASP ALA GLU ALA ILE THR HIS LEU PHE SEQRES 9 A 259 THR ASP VAL GLN ASN ARG TYR THR PHE ALA PHE GLY GLY SEQRES 10 A 259 ASN TYR ASP ARG LEU GLU GLN LEU ALA GLY ASN LEU ARG SEQRES 11 A 259 GLU ASN ILE GLU LEU GLY ASN GLY PRO LEU GLU GLU ALA SEQRES 12 A 259 ILE SER ALA LEU TYR TYR TYR SER THR GLY GLY THR GLN SEQRES 13 A 259 LEU PRO THR LEU ALA ARG SER PHE ILE ILE CYS ILE GLN SEQRES 14 A 259 MET ILE SER GLU ALA ALA ARG PHE GLN TYR ILE GLU GLY SEQRES 15 A 259 GLU MET ARG THR ARG ILE ARG TYR ASN ARG ARG SER ALA SEQRES 16 A 259 PRO ASP PRO SER VAL ILE THR LEU GLU ASN SER TRP GLY SEQRES 17 A 259 ARG LEU SER THR ALA ILE GLN GLU SER ASN GLN GLY ALA SEQRES 18 A 259 PHE ALA SER PRO ILE GLN LEU GLN ARG ARG ASN GLY SER SEQRES 19 A 259 LYS PHE SER VAL TYR ASP VAL SER ILE LEU ILE PRO ILE SEQRES 20 A 259 ILE ALA LEU MET VAL TYR ARG CYS ALA PRO PRO PRO SEQRES 1 B 119 GLN VAL GLN LEU ALA GLU THR GLY GLY GLY LEU VAL GLN SEQRES 2 B 119 PRO GLY GLY ALA ARG THR LEU SER CYS ALA ALA SER GLU SEQRES 3 B 119 SER ILE SER SER PHE TYR PHE MET GLY TRP TYR ARG GLN SEQRES 4 B 119 ALA PRO GLY LYS PRO ARG GLU LEU VAL ALA GLU ILE SER SEQRES 5 B 119 ASN TYR GLY ARG THR ASP TYR GLY ASP SER LEU LYS GLY SEQRES 6 B 119 ARG PHE THR ILE SER ARG ASP ASN ALA ALA ASN THR VAL SEQRES 7 B 119 ASN LEU GLN MET ASN ASN LEU ALA PRO GLU ASP THR ALA SEQRES 8 B 119 LEU TYR TYR CYS ASN ALA ARG LYS TRP GLU ARG SER VAL SEQRES 9 B 119 LEU GLU ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SEQRES 10 B 119 SER SER HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HET EDO A 304 4 HET EDO B 201 4 HET EDO B 202 4 HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CL 3(CL 1-) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 HOH *272(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 TYR A 154 1 15 HELIX 7 AA7 SER A 155 GLY A 157 5 3 HELIX 8 AA8 GLN A 160 PHE A 181 1 22 HELIX 9 AA9 PHE A 181 TYR A 194 1 14 HELIX 10 AB1 ASP A 201 SER A 210 1 10 HELIX 11 AB2 SER A 210 SER A 221 1 12 HELIX 12 AB3 SER A 246 ILE A 249 5 4 HELIX 13 AB4 SER B 27 PHE B 31 5 5 HELIX 14 AB5 ALA B 86 THR B 90 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O GLU A 61 N ILE A 9 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O LEU A 74 N ILE A 58 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O VAL A 82 N ALA A 73 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O SER A 89 N ALA A 86 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O ASN A 113 N ALA A 90 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O PHE A 240 N LEU A 232 SHEET 1 AA4 4 LEU B 4 THR B 7 0 SHEET 2 AA4 4 ARG B 18 ALA B 24 -1 O ALA B 23 N ALA B 5 SHEET 3 AA4 4 THR B 77 MET B 82 -1 O MET B 82 N ARG B 18 SHEET 4 AA4 4 PHE B 67 ASP B 72 -1 N SER B 70 O ASN B 79 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 113 VAL B 117 1 O THR B 116 N GLY B 10 SHEET 3 AA5 6 ALA B 91 GLU B 101 -1 N TYR B 93 O THR B 113 SHEET 4 AA5 6 PHE B 33 GLN B 39 -1 N TYR B 37 O TYR B 94 SHEET 5 AA5 6 GLU B 46 SER B 52 -1 O ALA B 49 N TRP B 36 SHEET 6 AA5 6 THR B 57 TYR B 59 -1 O ASP B 58 N GLU B 50 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 113 VAL B 117 1 O THR B 116 N GLY B 10 SHEET 3 AA6 4 ALA B 91 GLU B 101 -1 N TYR B 93 O THR B 113 SHEET 4 AA6 4 VAL B 104 TRP B 109 -1 O VAL B 104 N GLU B 101 SSBOND 1 CYS B 22 CYS B 95 1555 1555 2.03 SITE 1 AC1 5 PRO A 46 THR A 77 VAL A 256 TYR A 257 SITE 2 AC1 5 HOH A 493 SITE 1 AC2 5 TYR A 152 TYR A 153 SER A 155 THR A 156 SITE 2 AC2 5 HOH A 550 SITE 1 AC3 6 GLY A 140 ASN A 141 ARG A 191 ARG A 196 SITE 2 AC3 6 HOH A 427 HOH A 513 SITE 1 AC4 6 TYR A 80 PHE A 93 GLY A 121 ASN A 122 SITE 2 AC4 6 ARG B 102 SER B 103 SITE 1 AC5 7 ALA A 225 TYR A 243 ASP A 244 SER B 27 SITE 2 AC5 7 ILE B 28 ASN B 73 ASN B 76 SITE 1 AC6 6 GLN A 19 GLY A 158 GLY B 10 LEU B 11 SITE 2 AC6 6 ARG B 18 HOH B 305 CRYST1 38.748 47.197 58.430 100.25 97.30 109.71 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025808 0.009244 0.005653 0.00000 SCALE2 0.000000 0.022506 0.005477 0.00000 SCALE3 0.000000 0.000000 0.017758 0.00000