HEADER METAL TRANSPORT 21-MAR-19 6OBY TITLE THE NUCLEOTIDE-BINDING PROTEIN AF_226 IN COMPLEX WITH ADP FROM TITLE 2 ARCHAEOGLOBUS FULGIDUS WITH CO FOUND BY PIXE. BASED ON 3KB1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-SULFUR CLUSTER CARRIER PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ALPHA-BETA PROTEIN, PIXE, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR E.H.SNELL,E.F.GARMAN,E.D.LOWE REVDAT 4 06-NOV-24 6OBY 1 REMARK REVDAT 3 22-JAN-20 6OBY 1 JRNL REVDAT 2 08-JAN-20 6OBY 1 REMARK REVDAT 1 25-DEC-19 6OBY 0 JRNL AUTH G.W.GRIME,O.B.ZELDIN,M.E.SNELL,E.D.LOWE,J.F.HUNT, JRNL AUTH 2 G.T.MONTELIONE,L.TONG,E.H.SNELL,E.F.GARMAN JRNL TITL HIGH-THROUGHPUT PIXE AS AN ESSENTIAL QUANTITATIVE ASSAY FOR JRNL TITL 2 ACCURATE METALLOPROTEIN STRUCTURAL ANALYSIS: DEVELOPMENT AND JRNL TITL 3 APPLICATION. JRNL REF J.AM.CHEM.SOC. V. 142 185 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 31794207 JRNL DOI 10.1021/JACS.9B09186 REMARK 0 REMARK 0 THIS ENTRY 6OBY REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL REMARK 0 DATA IN 3KB1, DETERMINED BY F.FOROUHAR,S.LEW,M.ABASHIDZE, REMARK 0 J.SEETHARAMAN,M.MAO,R.XIAO, C.CICCOSANTI,H.WANG,J.K.EVERETT, REMARK 0 R.NAIR,T.B.ACTON,B.ROST,.T.MONTELIONE,J.F.HUNT,L.TONG,NORTHEAST REMARK 0 STRUCTURAL GENOMICS CONSORTIUM (NESG) REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0241 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 11606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 718 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3764 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.61000 REMARK 3 B22 (A**2) : 3.81000 REMARK 3 B33 (A**2) : 3.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.23000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.481 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.430 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.812 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.859 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3894 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3750 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5276 ; 1.434 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8706 ; 1.138 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 482 ; 7.592 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;34.446 ;23.103 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 650 ;17.641 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.221 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 510 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4254 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 758 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1940 ; 3.268 ; 5.128 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1939 ; 3.268 ; 5.128 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2418 ; 5.260 ; 7.681 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2419 ; 5.259 ; 7.681 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1954 ; 3.500 ; 5.471 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1954 ; 3.500 ; 5.471 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2859 ; 5.728 ; 8.025 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15924 ; 9.970 ;97.080 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15925 ; 9.970 ;97.075 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 4 258 B 4 258 7544 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6OBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97899 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26385 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.25400 REMARK 200 R SYM FOR SHELL (I) : 0.22000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: AUTHORS USED THE SF DATA FROM THE ENTRY 3KB1 REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5). RESERVOIR SOLUTION: 100 MM REMARK 280 NAACETATE (PH 4.6), 30% MPD, AND 200 MM NACL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.84100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLN A 2 REMARK 465 LYS A 3 REMARK 465 PRO A 100 REMARK 465 LYS A 101 REMARK 465 ARG A 102 REMARK 465 GLU A 103 REMARK 465 THR A 104 REMARK 465 PRO A 105 REMARK 465 VAL A 106 REMARK 465 ILE A 107 REMARK 465 TRP A 108 REMARK 465 ARG A 109 REMARK 465 GLY A 110 REMARK 465 PRO A 111 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 MSE B 1 REMARK 465 GLN B 2 REMARK 465 LYS B 3 REMARK 465 PRO B 100 REMARK 465 LYS B 101 REMARK 465 ARG B 102 REMARK 465 GLU B 103 REMARK 465 THR B 104 REMARK 465 PRO B 105 REMARK 465 VAL B 106 REMARK 465 ILE B 107 REMARK 465 TRP B 108 REMARK 465 ARG B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 HIS B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 176 CG - SE - CE ANGL. DEV. = 13.6 DEGREES REMARK 500 MSE A 191 CG - SE - CE ANGL. DEV. = 16.1 DEGREES REMARK 500 MSE B 24 CG - SE - CE ANGL. DEV. = 15.4 DEGREES REMARK 500 MSE B 191 CG - SE - CE ANGL. DEV. = 17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 60 90.06 -68.03 REMARK 500 LYS A 70 43.02 -58.02 REMARK 500 GLN A 96 -36.51 -38.00 REMARK 500 PHE A 97 31.12 -82.46 REMARK 500 LYS A 152 67.04 32.60 REMARK 500 GLU A 164 69.41 88.39 REMARK 500 LYS A 181 70.13 51.57 REMARK 500 TYR A 254 152.61 -49.50 REMARK 500 GLU A 256 105.25 -10.36 REMARK 500 PRO B 60 89.71 -68.07 REMARK 500 LYS B 70 42.20 -62.11 REMARK 500 LYS B 72 95.81 45.53 REMARK 500 GLN B 96 -36.16 -38.53 REMARK 500 PHE B 97 32.04 -82.90 REMARK 500 LYS B 152 66.44 33.68 REMARK 500 GLN B 163 3.38 -67.26 REMARK 500 GLU B 164 -123.24 -95.46 REMARK 500 TYR B 254 152.62 -48.85 REMARK 500 GLU B 256 105.03 -11.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KB1 RELATED DB: PDB DBREF 6OBY A 2 254 UNP O28015 O28015_ARCFU 2 254 DBREF 6OBY B 2 254 UNP O28015 O28015_ARCFU 2 254 SEQADV 6OBY MSE A 1 UNP O28015 INITIATING METHIONINE SEQADV 6OBY LEU A 255 UNP O28015 EXPRESSION TAG SEQADV 6OBY GLU A 256 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 257 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 258 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 259 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 260 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 261 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS A 262 UNP O28015 EXPRESSION TAG SEQADV 6OBY MSE B 1 UNP O28015 INITIATING METHIONINE SEQADV 6OBY LEU B 255 UNP O28015 EXPRESSION TAG SEQADV 6OBY GLU B 256 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 257 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 258 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 259 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 260 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 261 UNP O28015 EXPRESSION TAG SEQADV 6OBY HIS B 262 UNP O28015 EXPRESSION TAG SEQRES 1 A 262 MSE GLN LYS ARG VAL THR ASP GLU ASP ILE LYS GLU ARG SEQRES 2 A 262 LEU ASP LYS ILE GLY PHE ARG ILE ALA VAL MSE SER GLY SEQRES 3 A 262 LYS GLY GLY VAL GLY LYS SER THR VAL THR ALA LEU LEU SEQRES 4 A 262 ALA VAL HIS TYR ALA LYS GLN GLY LYS LYS VAL GLY ILE SEQRES 5 A 262 LEU ASP ALA ASP PHE LEU GLY PRO SER ILE PRO HIS LEU SEQRES 6 A 262 PHE GLY LEU GLU LYS GLY LYS VAL ALA VAL SER ASP GLU SEQRES 7 A 262 GLY LEU GLU PRO VAL LEU THR GLN ARG LEU GLY ILE LYS SEQRES 8 A 262 VAL MSE SER ILE GLN PHE LEU LEU PRO LYS ARG GLU THR SEQRES 9 A 262 PRO VAL ILE TRP ARG GLY PRO LEU ILE ALA GLY MSE ILE SEQRES 10 A 262 ARG GLU PHE LEU GLY ARG VAL ALA TRP GLY GLU LEU ASP SEQRES 11 A 262 TYR LEU LEU ILE ASP LEU PRO PRO GLY THR GLY ASP ALA SEQRES 12 A 262 PRO LEU THR VAL MSE GLN ASP ALA LYS PRO ASN GLY ALA SEQRES 13 A 262 VAL ILE VAL SER THR PRO GLN GLU LEU THR ALA ALA VAL SEQRES 14 A 262 VAL GLU LYS ALA ILE THR MSE ALA GLU GLN THR LYS THR SEQRES 15 A 262 ALA VAL LEU GLY ILE VAL GLU ASN MSE ALA TYR PHE GLU SEQRES 16 A 262 CYS PRO ASN CYS GLY GLU ARG THR TYR LEU PHE GLY GLU SEQRES 17 A 262 GLY LYS ALA SER GLU LEU ALA ARG LYS TYR LYS ILE GLU SEQRES 18 A 262 PHE ILE THR GLU ILE PRO ILE ASP SER ASP LEU LEU LYS SEQRES 19 A 262 LEU SER ASP LEU GLY ARG VAL GLU GLU TYR GLU PRO ASP SEQRES 20 A 262 TRP PHE GLU PHE PHE PRO TYR LEU GLU HIS HIS HIS HIS SEQRES 21 A 262 HIS HIS SEQRES 1 B 262 MSE GLN LYS ARG VAL THR ASP GLU ASP ILE LYS GLU ARG SEQRES 2 B 262 LEU ASP LYS ILE GLY PHE ARG ILE ALA VAL MSE SER GLY SEQRES 3 B 262 LYS GLY GLY VAL GLY LYS SER THR VAL THR ALA LEU LEU SEQRES 4 B 262 ALA VAL HIS TYR ALA LYS GLN GLY LYS LYS VAL GLY ILE SEQRES 5 B 262 LEU ASP ALA ASP PHE LEU GLY PRO SER ILE PRO HIS LEU SEQRES 6 B 262 PHE GLY LEU GLU LYS GLY LYS VAL ALA VAL SER ASP GLU SEQRES 7 B 262 GLY LEU GLU PRO VAL LEU THR GLN ARG LEU GLY ILE LYS SEQRES 8 B 262 VAL MSE SER ILE GLN PHE LEU LEU PRO LYS ARG GLU THR SEQRES 9 B 262 PRO VAL ILE TRP ARG GLY PRO LEU ILE ALA GLY MSE ILE SEQRES 10 B 262 ARG GLU PHE LEU GLY ARG VAL ALA TRP GLY GLU LEU ASP SEQRES 11 B 262 TYR LEU LEU ILE ASP LEU PRO PRO GLY THR GLY ASP ALA SEQRES 12 B 262 PRO LEU THR VAL MSE GLN ASP ALA LYS PRO ASN GLY ALA SEQRES 13 B 262 VAL ILE VAL SER THR PRO GLN GLU LEU THR ALA ALA VAL SEQRES 14 B 262 VAL GLU LYS ALA ILE THR MSE ALA GLU GLN THR LYS THR SEQRES 15 B 262 ALA VAL LEU GLY ILE VAL GLU ASN MSE ALA TYR PHE GLU SEQRES 16 B 262 CYS PRO ASN CYS GLY GLU ARG THR TYR LEU PHE GLY GLU SEQRES 17 B 262 GLY LYS ALA SER GLU LEU ALA ARG LYS TYR LYS ILE GLU SEQRES 18 B 262 PHE ILE THR GLU ILE PRO ILE ASP SER ASP LEU LEU LYS SEQRES 19 B 262 LEU SER ASP LEU GLY ARG VAL GLU GLU TYR GLU PRO ASP SEQRES 20 B 262 TRP PHE GLU PHE PHE PRO TYR LEU GLU HIS HIS HIS HIS SEQRES 21 B 262 HIS HIS MODRES 6OBY MSE A 24 MET MODIFIED RESIDUE MODRES 6OBY MSE A 93 MET MODIFIED RESIDUE MODRES 6OBY MSE A 116 MET MODIFIED RESIDUE MODRES 6OBY MSE A 148 MET MODIFIED RESIDUE MODRES 6OBY MSE A 176 MET MODIFIED RESIDUE MODRES 6OBY MSE A 191 MET MODIFIED RESIDUE MODRES 6OBY MSE B 24 MET MODIFIED RESIDUE MODRES 6OBY MSE B 93 MET MODIFIED RESIDUE MODRES 6OBY MSE B 116 MET MODIFIED RESIDUE MODRES 6OBY MSE B 148 MET MODIFIED RESIDUE MODRES 6OBY MSE B 176 MET MODIFIED RESIDUE MODRES 6OBY MSE B 191 MET MODIFIED RESIDUE HET MSE A 24 8 HET MSE A 93 8 HET MSE A 116 8 HET MSE A 148 8 HET MSE A 176 8 HET MSE A 191 8 HET MSE B 24 8 HET MSE B 93 8 HET MSE B 116 8 HET MSE B 148 8 HET MSE B 176 8 HET MSE B 191 8 HET ADP A 301 27 HET CO A 302 1 HET ADP B 301 27 HETNAM MSE SELENOMETHIONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM CO COBALT (II) ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 CO CO 2+ FORMUL 6 HOH *8(H2 O) HELIX 1 AA1 THR A 6 ASP A 15 1 10 HELIX 2 AA2 GLY A 31 GLN A 46 1 16 HELIX 3 AA3 PRO A 60 PHE A 66 1 7 HELIX 4 AA4 GLN A 96 LEU A 98 5 3 HELIX 5 AA5 ILE A 113 ARG A 123 1 11 HELIX 6 AA6 ASP A 142 LYS A 152 1 11 HELIX 7 AA7 THR A 166 GLN A 179 1 14 HELIX 8 AA8 GLY A 209 LYS A 219 1 11 HELIX 9 AA9 ASP A 229 GLY A 239 1 11 HELIX 10 AB1 ARG A 240 TYR A 244 5 5 HELIX 11 AB2 THR B 6 ASP B 15 1 10 HELIX 12 AB3 GLY B 31 GLN B 46 1 16 HELIX 13 AB4 PRO B 60 PHE B 66 1 7 HELIX 14 AB5 GLN B 96 LEU B 98 5 3 HELIX 15 AB6 ILE B 113 ARG B 123 1 11 HELIX 16 AB7 ASP B 142 LYS B 152 1 11 HELIX 17 AB8 THR B 166 GLN B 179 1 14 HELIX 18 AB9 GLY B 209 LYS B 219 1 11 HELIX 19 AC1 ASP B 229 GLY B 239 1 11 HELIX 20 AC2 ARG B 240 TYR B 244 5 5 SHEET 1 AA1 8 VAL A 83 LEU A 84 0 SHEET 2 AA1 8 LYS A 91 SER A 94 -1 O VAL A 92 N VAL A 83 SHEET 3 AA1 8 VAL A 50 ASP A 54 1 N ASP A 54 O MSE A 93 SHEET 4 AA1 8 LEU A 129 ASP A 135 1 O LEU A 133 N GLY A 51 SHEET 5 AA1 8 ILE A 17 SER A 25 1 N VAL A 23 O ILE A 134 SHEET 6 AA1 8 GLY A 155 SER A 160 1 O VAL A 159 N MSE A 24 SHEET 7 AA1 8 ALA A 183 ASN A 190 1 O VAL A 188 N ILE A 158 SHEET 8 AA1 8 PHE A 222 ILE A 226 1 O THR A 224 N GLU A 189 SHEET 1 AA2 2 ALA A 74 SER A 76 0 SHEET 2 AA2 2 GLY A 79 GLU A 81 -1 O GLU A 81 N ALA A 74 SHEET 1 AA3 2 TYR A 193 GLU A 195 0 SHEET 2 AA3 2 ARG A 202 TYR A 204 -1 O THR A 203 N PHE A 194 SHEET 1 AA4 8 VAL B 83 LEU B 84 0 SHEET 2 AA4 8 LYS B 91 SER B 94 -1 O VAL B 92 N VAL B 83 SHEET 3 AA4 8 VAL B 50 ASP B 54 1 N ASP B 54 O MSE B 93 SHEET 4 AA4 8 LEU B 129 ASP B 135 1 O LEU B 133 N GLY B 51 SHEET 5 AA4 8 ILE B 17 SER B 25 1 N VAL B 23 O ILE B 134 SHEET 6 AA4 8 GLY B 155 SER B 160 1 O VAL B 159 N MSE B 24 SHEET 7 AA4 8 ALA B 183 ASN B 190 1 O VAL B 188 N ILE B 158 SHEET 8 AA4 8 PHE B 222 ILE B 226 1 O THR B 224 N GLU B 189 SHEET 1 AA5 2 ALA B 74 SER B 76 0 SHEET 2 AA5 2 GLY B 79 GLU B 81 -1 O GLU B 81 N ALA B 74 SHEET 1 AA6 2 TYR B 193 GLU B 195 0 SHEET 2 AA6 2 ARG B 202 TYR B 204 -1 O THR B 203 N PHE B 194 LINK C VAL A 23 N MSE A 24 1555 1555 1.35 LINK C MSE A 24 N SER A 25 1555 1555 1.34 LINK C VAL A 92 N MSE A 93 1555 1555 1.34 LINK C MSE A 93 N SER A 94 1555 1555 1.34 LINK C GLY A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N ILE A 117 1555 1555 1.34 LINK C VAL A 147 N MSE A 148 1555 1555 1.34 LINK C MSE A 148 N GLN A 149 1555 1555 1.34 LINK C THR A 175 N MSE A 176 1555 1555 1.35 LINK C MSE A 176 N ALA A 177 1555 1555 1.34 LINK C ASN A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N ALA A 192 1555 1555 1.33 LINK C VAL B 23 N MSE B 24 1555 1555 1.35 LINK C MSE B 24 N SER B 25 1555 1555 1.34 LINK C VAL B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N SER B 94 1555 1555 1.34 LINK C GLY B 115 N MSE B 116 1555 1555 1.34 LINK C MSE B 116 N ILE B 117 1555 1555 1.34 LINK C VAL B 147 N MSE B 148 1555 1555 1.34 LINK C MSE B 148 N GLN B 149 1555 1555 1.34 LINK C THR B 175 N MSE B 176 1555 1555 1.34 LINK C MSE B 176 N ALA B 177 1555 1555 1.34 LINK C ASN B 190 N MSE B 191 1555 1555 1.33 LINK C MSE B 191 N ALA B 192 1555 1555 1.33 SITE 1 AC1 14 GLY A 29 VAL A 30 GLY A 31 LYS A 32 SITE 2 AC1 14 SER A 33 THR A 34 SER A 61 ASN A 190 SITE 3 AC1 14 MSE A 191 PRO A 227 ILE A 228 ASP A 229 SITE 4 AC1 14 SER A 236 GLN B 163 SITE 1 AC2 4 CYS A 196 CYS A 199 CYS B 196 CYS B 199 SITE 1 AC3 16 GLN A 163 GLY B 28 GLY B 29 VAL B 30 SITE 2 AC3 16 GLY B 31 LYS B 32 SER B 33 THR B 34 SITE 3 AC3 16 SER B 61 ASN B 190 MSE B 191 ILE B 226 SITE 4 AC3 16 PRO B 227 ILE B 228 ASP B 229 SER B 236 CRYST1 51.440 67.682 79.403 90.00 90.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019440 0.000000 0.000031 0.00000 SCALE2 0.000000 0.014775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012594 0.00000