HEADER HYDROLASE 26-MAR-19 6ODC TITLE CRYSTAL STRUCTURE OF HDAC8 IN COMPLEX WITH COMPOUND 30 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE 8; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: HD8; COMPND 5 EC: 3.5.1.98; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HDAC8, HDACL1, CDA07; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HISTONE DEACETYLASE, HDAC8, HYDROXAMIC ACID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHENG,C.CONTI,J.CARAVELLA,M.-M.ZABLOCKI,K.BAIR,N.BARCZAK,B.HAN, AUTHOR 2 D.LANCIA JR.,C.LIU,M.MARTIN,P.Y.NG,A.RUDNITSKAYA,J.J.THOMASON, AUTHOR 3 R.GARCIA-DANCEY,C.HARDY,J.LAHDENRANTA,C.LENG,P.LI,E.PARDO, AUTHOR 4 A.SALDAHNA,T.TAN,A.V.TOMS,L.YAO,C.ZHANG REVDAT 2 11-OCT-23 6ODC 1 LINK REVDAT 1 01-APR-20 6ODC 0 JRNL AUTH X.ZHENG,C.CONTI,J.CARAVELLA,M.-M.ZABLOCKI,K.BAIR,N.BARCZAK, JRNL AUTH 2 B.HAN,D.LANCIA JR.,C.LIU,M.MARTIN,P.Y.NG,A.RUDNITSKAYA, JRNL AUTH 3 J.J.THOMASON,R.GARCIA-DANCEY,C.HARDY,J.LAHDENRANTA,C.LENG, JRNL AUTH 4 P.LI,E.PARDO,A.SALDAHNA,T.TAN,A.V.TOMS,L.YAO,C.ZHANG JRNL TITL STRUCTURE-BASED DISCOVERY OF NOVEL JRNL TITL 2 N-(E)-N-HYDROXY-3-(2-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL) JRNL TITL 3 ACRYLAMIDES AS POTENT AND SELECTIVE HDAC8 INHIBITORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 34035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1768 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2324 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE SET COUNT : 123 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8476 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 59 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.14000 REMARK 3 B22 (A**2) : -0.92000 REMARK 3 B33 (A**2) : -2.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.68000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.313 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.127 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8858 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 8093 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11953 ; 1.452 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18767 ; 0.966 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1087 ; 6.354 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 378 ;37.546 ;24.180 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1436 ;15.924 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;13.926 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1297 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9797 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1798 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4348 ; 5.164 ; 7.549 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4347 ; 5.143 ; 7.548 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5429 ; 7.792 ;11.317 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5430 ; 7.797 ;11.318 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4510 ; 5.158 ; 8.010 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4511 ; 5.157 ; 8.010 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6523 ; 8.018 ;11.861 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9941 ;10.951 ;89.087 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9942 ;10.956 ;89.082 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 14 377 B 14 377 24030 0.07 0.05 REMARK 3 2 A 14 377 C 14 377 23076 0.07 0.05 REMARK 3 3 B 14 377 C 14 377 23090 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ODC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35823 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.01250 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1T64 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH5.3, 5% PEG6000, 0.14 M GLY REMARK 280 -GLY-GLY, 2MM TCEP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.58050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 GLY A 11 REMARK 465 GLN A 12 REMARK 465 SER A 13 REMARK 465 ARG A 381 REMARK 465 GLY A 382 REMARK 465 SER A 383 REMARK 465 HIS A 384 REMARK 465 HIS A 385 REMARK 465 HIS A 386 REMARK 465 HIS A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLU B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 PRO B 7 REMARK 465 ALA B 8 REMARK 465 ASP B 9 REMARK 465 SER B 10 REMARK 465 GLY B 11 REMARK 465 GLN B 12 REMARK 465 GLU B 379 REMARK 465 GLY B 380 REMARK 465 ARG B 381 REMARK 465 GLY B 382 REMARK 465 SER B 383 REMARK 465 HIS B 384 REMARK 465 HIS B 385 REMARK 465 HIS B 386 REMARK 465 HIS B 387 REMARK 465 HIS B 388 REMARK 465 HIS B 389 REMARK 465 MET C -23 REMARK 465 HIS C -22 REMARK 465 HIS C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 SER C -16 REMARK 465 SER C -15 REMARK 465 GLY C -14 REMARK 465 VAL C -13 REMARK 465 ASP C -12 REMARK 465 LEU C -11 REMARK 465 GLY C -10 REMARK 465 THR C -9 REMARK 465 GLU C -8 REMARK 465 ASN C -7 REMARK 465 LEU C -6 REMARK 465 TYR C -5 REMARK 465 PHE C -4 REMARK 465 GLN C -3 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 GLU C 3 REMARK 465 PRO C 4 REMARK 465 GLU C 5 REMARK 465 GLU C 6 REMARK 465 PRO C 7 REMARK 465 ALA C 8 REMARK 465 ASP C 9 REMARK 465 SER C 10 REMARK 465 GLY C 11 REMARK 465 GLN C 12 REMARK 465 SER C 13 REMARK 465 GLY C 86 REMARK 465 ASP C 87 REMARK 465 ASP C 88 REMARK 465 ASP C 89 REMARK 465 HIS C 90 REMARK 465 PRO C 91 REMARK 465 ASP C 92 REMARK 465 SER C 93 REMARK 465 ILE C 94 REMARK 465 GLU C 95 REMARK 465 ILE C 378 REMARK 465 GLU C 379 REMARK 465 GLY C 380 REMARK 465 ARG C 381 REMARK 465 GLY C 382 REMARK 465 SER C 383 REMARK 465 HIS C 384 REMARK 465 HIS C 385 REMARK 465 HIS C 386 REMARK 465 HIS C 387 REMARK 465 HIS C 388 REMARK 465 HIS C 389 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 30 50.02 -94.06 REMARK 500 LYS A 33 -18.85 82.15 REMARK 500 GLU A 85 -121.89 -94.09 REMARK 500 ALA A 104 48.15 -89.39 REMARK 500 ASN A 256 65.14 38.66 REMARK 500 ASP A 267 0.18 -67.44 REMARK 500 SER B 30 49.54 -93.93 REMARK 500 LYS B 33 -19.34 81.95 REMARK 500 GLU B 85 -114.90 -95.32 REMARK 500 ALA B 104 46.69 -86.14 REMARK 500 ASN B 256 66.23 38.15 REMARK 500 SER C 30 48.64 -92.18 REMARK 500 LYS C 33 -21.09 82.45 REMARK 500 ASN C 256 65.15 38.58 REMARK 500 ASP C 267 0.20 -67.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 176 O REMARK 620 2 ASP A 176 OD1 72.0 REMARK 620 3 ASP A 178 O 103.7 100.1 REMARK 620 4 HIS A 180 O 160.7 88.7 81.0 REMARK 620 5 SER A 199 OG 87.1 103.2 156.4 95.8 REMARK 620 6 LEU A 200 O 81.1 146.2 66.5 117.5 95.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 178 OD2 REMARK 620 2 HIS A 180 ND1 102.2 REMARK 620 3 ASP A 267 OD2 100.9 106.4 REMARK 620 4 M7Y A 404 O11 91.3 122.2 126.0 REMARK 620 5 M7Y A 404 O12 167.5 83.2 88.1 76.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 402 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 189 O REMARK 620 2 THR A 192 O 76.0 REMARK 620 3 VAL A 195 O 117.1 87.1 REMARK 620 4 TYR A 225 O 151.6 119.7 88.6 REMARK 620 5 HOH A 503 O 85.3 88.8 155.3 72.4 REMARK 620 6 HOH A 506 O 72.2 143.7 122.8 84.0 71.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 176 O REMARK 620 2 ASP B 176 OD1 71.9 REMARK 620 3 ASP B 178 O 103.6 99.4 REMARK 620 4 HIS B 180 O 160.7 88.9 81.0 REMARK 620 5 SER B 199 OG 86.5 103.3 157.1 96.3 REMARK 620 6 LEU B 200 O 81.0 145.7 66.6 117.6 95.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 178 OD2 REMARK 620 2 HIS B 180 ND1 99.4 REMARK 620 3 ASP B 267 OD2 98.6 107.8 REMARK 620 4 M7Y B 404 N10 114.3 90.7 139.1 REMARK 620 5 M7Y B 404 O11 86.4 114.0 136.4 33.3 REMARK 620 6 M7Y B 404 O12 163.1 93.7 87.5 54.4 78.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 402 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 189 O REMARK 620 2 THR B 192 O 77.1 REMARK 620 3 VAL B 195 O 113.6 88.1 REMARK 620 4 TYR B 225 O 150.9 122.9 89.6 REMARK 620 5 HOH B 506 O 91.6 95.8 154.7 67.2 REMARK 620 6 HOH B 520 O 72.2 146.6 116.0 82.2 72.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 176 O REMARK 620 2 ASP C 176 OD1 73.1 REMARK 620 3 ASP C 178 O 103.7 99.7 REMARK 620 4 HIS C 180 O 161.7 88.8 81.4 REMARK 620 5 SER C 199 OG 87.0 103.7 156.2 95.2 REMARK 620 6 LEU C 200 O 80.8 147.0 67.0 117.0 94.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 178 OD2 REMARK 620 2 HIS C 180 ND1 102.1 REMARK 620 3 ASP C 267 OD2 98.8 105.6 REMARK 620 4 M7Y C 404 N10 119.7 99.7 127.7 REMARK 620 5 M7Y C 404 O11 93.5 124.6 124.1 31.2 REMARK 620 6 M7Y C 404 O12 171.4 84.2 84.9 52.8 78.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 402 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 189 O REMARK 620 2 THR C 192 O 76.7 REMARK 620 3 VAL C 195 O 114.9 88.3 REMARK 620 4 TYR C 225 O 151.4 121.9 88.9 REMARK 620 5 HOH C 501 O 76.4 83.8 164.4 83.9 REMARK 620 6 HOH C 507 O 75.9 150.8 112.5 80.4 80.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue M7Y A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue M7Y B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue M7Y C 404 DBREF 6ODC A 1 377 UNP Q9BY41 HDAC8_HUMAN 1 377 DBREF 6ODC B 1 377 UNP Q9BY41 HDAC8_HUMAN 1 377 DBREF 6ODC C 1 377 UNP Q9BY41 HDAC8_HUMAN 1 377 SEQADV 6ODC MET A -23 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -22 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -21 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -20 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -19 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -18 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A -17 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER A -16 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER A -15 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY A -14 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC VAL A -13 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASP A -12 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU A -11 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY A -10 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC THR A -9 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU A -8 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN A -7 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU A -6 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC TYR A -5 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC PHE A -4 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLN A -3 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER A -2 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN A -1 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ALA A 0 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ILE A 378 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU A 379 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY A 380 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ARG A 381 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY A 382 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER A 383 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 384 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 385 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 386 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 387 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 388 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS A 389 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC MET B -23 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -22 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -21 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -20 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -19 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -18 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B -17 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER B -16 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER B -15 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY B -14 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC VAL B -13 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASP B -12 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU B -11 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY B -10 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC THR B -9 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU B -8 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN B -7 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU B -6 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC TYR B -5 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC PHE B -4 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLN B -3 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER B -2 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN B -1 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ALA B 0 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ILE B 378 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU B 379 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY B 380 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ARG B 381 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY B 382 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER B 383 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 384 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 385 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 386 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 387 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 388 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS B 389 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC MET C -23 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -22 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -21 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -20 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -19 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -18 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C -17 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER C -16 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER C -15 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY C -14 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC VAL C -13 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASP C -12 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU C -11 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY C -10 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC THR C -9 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU C -8 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN C -7 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC LEU C -6 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC TYR C -5 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC PHE C -4 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLN C -3 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER C -2 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ASN C -1 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ALA C 0 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ILE C 378 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLU C 379 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY C 380 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC ARG C 381 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC GLY C 382 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC SER C 383 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 384 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 385 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 386 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 387 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 388 UNP Q9BY41 EXPRESSION TAG SEQADV 6ODC HIS C 389 UNP Q9BY41 EXPRESSION TAG SEQRES 1 A 413 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 413 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLU SEQRES 3 A 413 GLU PRO GLU GLU PRO ALA ASP SER GLY GLN SER LEU VAL SEQRES 4 A 413 PRO VAL TYR ILE TYR SER PRO GLU TYR VAL SER MET CYS SEQRES 5 A 413 ASP SER LEU ALA LYS ILE PRO LYS ARG ALA SER MET VAL SEQRES 6 A 413 HIS SER LEU ILE GLU ALA TYR ALA LEU HIS LYS GLN MET SEQRES 7 A 413 ARG ILE VAL LYS PRO LYS VAL ALA SER MET GLU GLU MET SEQRES 8 A 413 ALA THR PHE HIS THR ASP ALA TYR LEU GLN HIS LEU GLN SEQRES 9 A 413 LYS VAL SER GLN GLU GLY ASP ASP ASP HIS PRO ASP SER SEQRES 10 A 413 ILE GLU TYR GLY LEU GLY TYR ASP CYS PRO ALA THR GLU SEQRES 11 A 413 GLY ILE PHE ASP TYR ALA ALA ALA ILE GLY GLY ALA THR SEQRES 12 A 413 ILE THR ALA ALA GLN CYS LEU ILE ASP GLY MET CYS LYS SEQRES 13 A 413 VAL ALA ILE ASN TRP SER GLY GLY TRP HIS HIS ALA LYS SEQRES 14 A 413 LYS ASP GLU ALA SER GLY PHE CYS TYR LEU ASN ASP ALA SEQRES 15 A 413 VAL LEU GLY ILE LEU ARG LEU ARG ARG LYS PHE GLU ARG SEQRES 16 A 413 ILE LEU TYR VAL ASP LEU ASP LEU HIS HIS GLY ASP GLY SEQRES 17 A 413 VAL GLU ASP ALA PHE SER PHE THR SER LYS VAL MET THR SEQRES 18 A 413 VAL SER LEU HIS LYS PHE SER PRO GLY PHE PHE PRO GLY SEQRES 19 A 413 THR GLY ASP VAL SER ASP VAL GLY LEU GLY LYS GLY ARG SEQRES 20 A 413 TYR TYR SER VAL ASN VAL PRO ILE GLN ASP GLY ILE GLN SEQRES 21 A 413 ASP GLU LYS TYR TYR GLN ILE CYS GLU SER VAL LEU LYS SEQRES 22 A 413 GLU VAL TYR GLN ALA PHE ASN PRO LYS ALA VAL VAL LEU SEQRES 23 A 413 GLN LEU GLY ALA ASP THR ILE ALA GLY ASP PRO MET CYS SEQRES 24 A 413 SER PHE ASN MET THR PRO VAL GLY ILE GLY LYS CYS LEU SEQRES 25 A 413 LYS TYR ILE LEU GLN TRP GLN LEU ALA THR LEU ILE LEU SEQRES 26 A 413 GLY GLY GLY GLY TYR ASN LEU ALA ASN THR ALA ARG CYS SEQRES 27 A 413 TRP THR TYR LEU THR GLY VAL ILE LEU GLY LYS THR LEU SEQRES 28 A 413 SER SER GLU ILE PRO ASP HIS GLU PHE PHE THR ALA TYR SEQRES 29 A 413 GLY PRO ASP TYR VAL LEU GLU ILE THR PRO SER CYS ARG SEQRES 30 A 413 PRO ASP ARG ASN GLU PRO HIS ARG ILE GLN GLN ILE LEU SEQRES 31 A 413 ASN TYR ILE LYS GLY ASN LEU LYS HIS VAL VAL ILE GLU SEQRES 32 A 413 GLY ARG GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 413 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 413 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLU SEQRES 3 B 413 GLU PRO GLU GLU PRO ALA ASP SER GLY GLN SER LEU VAL SEQRES 4 B 413 PRO VAL TYR ILE TYR SER PRO GLU TYR VAL SER MET CYS SEQRES 5 B 413 ASP SER LEU ALA LYS ILE PRO LYS ARG ALA SER MET VAL SEQRES 6 B 413 HIS SER LEU ILE GLU ALA TYR ALA LEU HIS LYS GLN MET SEQRES 7 B 413 ARG ILE VAL LYS PRO LYS VAL ALA SER MET GLU GLU MET SEQRES 8 B 413 ALA THR PHE HIS THR ASP ALA TYR LEU GLN HIS LEU GLN SEQRES 9 B 413 LYS VAL SER GLN GLU GLY ASP ASP ASP HIS PRO ASP SER SEQRES 10 B 413 ILE GLU TYR GLY LEU GLY TYR ASP CYS PRO ALA THR GLU SEQRES 11 B 413 GLY ILE PHE ASP TYR ALA ALA ALA ILE GLY GLY ALA THR SEQRES 12 B 413 ILE THR ALA ALA GLN CYS LEU ILE ASP GLY MET CYS LYS SEQRES 13 B 413 VAL ALA ILE ASN TRP SER GLY GLY TRP HIS HIS ALA LYS SEQRES 14 B 413 LYS ASP GLU ALA SER GLY PHE CYS TYR LEU ASN ASP ALA SEQRES 15 B 413 VAL LEU GLY ILE LEU ARG LEU ARG ARG LYS PHE GLU ARG SEQRES 16 B 413 ILE LEU TYR VAL ASP LEU ASP LEU HIS HIS GLY ASP GLY SEQRES 17 B 413 VAL GLU ASP ALA PHE SER PHE THR SER LYS VAL MET THR SEQRES 18 B 413 VAL SER LEU HIS LYS PHE SER PRO GLY PHE PHE PRO GLY SEQRES 19 B 413 THR GLY ASP VAL SER ASP VAL GLY LEU GLY LYS GLY ARG SEQRES 20 B 413 TYR TYR SER VAL ASN VAL PRO ILE GLN ASP GLY ILE GLN SEQRES 21 B 413 ASP GLU LYS TYR TYR GLN ILE CYS GLU SER VAL LEU LYS SEQRES 22 B 413 GLU VAL TYR GLN ALA PHE ASN PRO LYS ALA VAL VAL LEU SEQRES 23 B 413 GLN LEU GLY ALA ASP THR ILE ALA GLY ASP PRO MET CYS SEQRES 24 B 413 SER PHE ASN MET THR PRO VAL GLY ILE GLY LYS CYS LEU SEQRES 25 B 413 LYS TYR ILE LEU GLN TRP GLN LEU ALA THR LEU ILE LEU SEQRES 26 B 413 GLY GLY GLY GLY TYR ASN LEU ALA ASN THR ALA ARG CYS SEQRES 27 B 413 TRP THR TYR LEU THR GLY VAL ILE LEU GLY LYS THR LEU SEQRES 28 B 413 SER SER GLU ILE PRO ASP HIS GLU PHE PHE THR ALA TYR SEQRES 29 B 413 GLY PRO ASP TYR VAL LEU GLU ILE THR PRO SER CYS ARG SEQRES 30 B 413 PRO ASP ARG ASN GLU PRO HIS ARG ILE GLN GLN ILE LEU SEQRES 31 B 413 ASN TYR ILE LYS GLY ASN LEU LYS HIS VAL VAL ILE GLU SEQRES 32 B 413 GLY ARG GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 C 413 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 413 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLU SEQRES 3 C 413 GLU PRO GLU GLU PRO ALA ASP SER GLY GLN SER LEU VAL SEQRES 4 C 413 PRO VAL TYR ILE TYR SER PRO GLU TYR VAL SER MET CYS SEQRES 5 C 413 ASP SER LEU ALA LYS ILE PRO LYS ARG ALA SER MET VAL SEQRES 6 C 413 HIS SER LEU ILE GLU ALA TYR ALA LEU HIS LYS GLN MET SEQRES 7 C 413 ARG ILE VAL LYS PRO LYS VAL ALA SER MET GLU GLU MET SEQRES 8 C 413 ALA THR PHE HIS THR ASP ALA TYR LEU GLN HIS LEU GLN SEQRES 9 C 413 LYS VAL SER GLN GLU GLY ASP ASP ASP HIS PRO ASP SER SEQRES 10 C 413 ILE GLU TYR GLY LEU GLY TYR ASP CYS PRO ALA THR GLU SEQRES 11 C 413 GLY ILE PHE ASP TYR ALA ALA ALA ILE GLY GLY ALA THR SEQRES 12 C 413 ILE THR ALA ALA GLN CYS LEU ILE ASP GLY MET CYS LYS SEQRES 13 C 413 VAL ALA ILE ASN TRP SER GLY GLY TRP HIS HIS ALA LYS SEQRES 14 C 413 LYS ASP GLU ALA SER GLY PHE CYS TYR LEU ASN ASP ALA SEQRES 15 C 413 VAL LEU GLY ILE LEU ARG LEU ARG ARG LYS PHE GLU ARG SEQRES 16 C 413 ILE LEU TYR VAL ASP LEU ASP LEU HIS HIS GLY ASP GLY SEQRES 17 C 413 VAL GLU ASP ALA PHE SER PHE THR SER LYS VAL MET THR SEQRES 18 C 413 VAL SER LEU HIS LYS PHE SER PRO GLY PHE PHE PRO GLY SEQRES 19 C 413 THR GLY ASP VAL SER ASP VAL GLY LEU GLY LYS GLY ARG SEQRES 20 C 413 TYR TYR SER VAL ASN VAL PRO ILE GLN ASP GLY ILE GLN SEQRES 21 C 413 ASP GLU LYS TYR TYR GLN ILE CYS GLU SER VAL LEU LYS SEQRES 22 C 413 GLU VAL TYR GLN ALA PHE ASN PRO LYS ALA VAL VAL LEU SEQRES 23 C 413 GLN LEU GLY ALA ASP THR ILE ALA GLY ASP PRO MET CYS SEQRES 24 C 413 SER PHE ASN MET THR PRO VAL GLY ILE GLY LYS CYS LEU SEQRES 25 C 413 LYS TYR ILE LEU GLN TRP GLN LEU ALA THR LEU ILE LEU SEQRES 26 C 413 GLY GLY GLY GLY TYR ASN LEU ALA ASN THR ALA ARG CYS SEQRES 27 C 413 TRP THR TYR LEU THR GLY VAL ILE LEU GLY LYS THR LEU SEQRES 28 C 413 SER SER GLU ILE PRO ASP HIS GLU PHE PHE THR ALA TYR SEQRES 29 C 413 GLY PRO ASP TYR VAL LEU GLU ILE THR PRO SER CYS ARG SEQRES 30 C 413 PRO ASP ARG ASN GLU PRO HIS ARG ILE GLN GLN ILE LEU SEQRES 31 C 413 ASN TYR ILE LYS GLY ASN LEU LYS HIS VAL VAL ILE GLU SEQRES 32 C 413 GLY ARG GLY SER HIS HIS HIS HIS HIS HIS HET ZN A 401 1 HET K A 402 1 HET K A 403 1 HET M7Y A 404 25 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET ZN B 401 1 HET K B 402 1 HET K B 403 1 HET M7Y B 404 25 HET EDO B 405 4 HET ZN C 401 1 HET K C 402 1 HET K C 403 1 HET M7Y C 404 25 HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM M7Y (2E)-3-[2-(3-CYCLOPENTYL-5,5-DIMETHYL-2- HETNAM 2 M7Y OXOIMIDAZOLIDIN-1-YL)PHENYL]-N-HYDROXYPROP-2-ENAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 ZN 3(ZN 2+) FORMUL 5 K 6(K 1+) FORMUL 7 M7Y 3(C19 H25 N3 O3) FORMUL 8 EDO 4(C2 H6 O2) FORMUL 20 HOH *59(H2 O) HELIX 1 AA1 SER A 21 SER A 30 1 10 HELIX 2 AA2 LYS A 36 TYR A 48 1 13 HELIX 3 AA3 ALA A 49 MET A 54 5 6 HELIX 4 AA4 SER A 63 ALA A 68 1 6 HELIX 5 AA5 THR A 72 GLU A 85 1 14 HELIX 6 AA6 HIS A 90 GLY A 97 5 8 HELIX 7 AA7 GLY A 107 ASP A 128 1 22 HELIX 8 AA8 ASN A 156 ARG A 166 1 11 HELIX 9 AA9 GLY A 182 PHE A 189 1 8 HELIX 10 AB1 LEU A 219 ARG A 223 5 5 HELIX 11 AB2 GLN A 236 ASN A 256 1 21 HELIX 12 AB3 GLY A 265 ILE A 269 5 5 HELIX 13 AB4 THR A 280 GLN A 293 1 14 HELIX 14 AB5 ASN A 307 GLY A 324 1 18 HELIX 15 AB6 PHE A 336 GLY A 341 5 6 HELIX 16 AB7 GLU A 358 GLU A 379 1 22 HELIX 17 AB8 SER B 21 SER B 30 1 10 HELIX 18 AB9 LYS B 36 TYR B 48 1 13 HELIX 19 AC1 ALA B 49 MET B 54 5 6 HELIX 20 AC2 SER B 63 ALA B 68 1 6 HELIX 21 AC3 THR B 72 GLU B 85 1 14 HELIX 22 AC4 HIS B 90 GLY B 97 5 8 HELIX 23 AC5 GLY B 107 ASP B 128 1 22 HELIX 24 AC6 ASN B 156 ARG B 166 1 11 HELIX 25 AC7 GLY B 182 PHE B 189 1 8 HELIX 26 AC8 LEU B 219 ARG B 223 5 5 HELIX 27 AC9 GLN B 236 ASN B 256 1 21 HELIX 28 AD1 GLY B 265 ILE B 269 5 5 HELIX 29 AD2 THR B 280 GLN B 293 1 14 HELIX 30 AD3 ASN B 307 GLY B 324 1 18 HELIX 31 AD4 PHE B 336 GLY B 341 5 6 HELIX 32 AD5 GLU B 358 VAL B 376 1 19 HELIX 33 AD6 SER C 21 SER C 30 1 10 HELIX 34 AD7 LYS C 36 TYR C 48 1 13 HELIX 35 AD8 ALA C 49 MET C 54 5 6 HELIX 36 AD9 SER C 63 ALA C 68 1 6 HELIX 37 AE1 THR C 72 GLU C 85 1 14 HELIX 38 AE2 GLY C 107 ASP C 128 1 22 HELIX 39 AE3 ASN C 156 ARG C 166 1 11 HELIX 40 AE4 GLY C 182 PHE C 189 1 8 HELIX 41 AE5 LEU C 219 ARG C 223 5 5 HELIX 42 AE6 GLN C 236 ASN C 256 1 21 HELIX 43 AE7 GLY C 265 ILE C 269 5 5 HELIX 44 AE8 THR C 280 GLN C 293 1 14 HELIX 45 AE9 ASN C 307 GLY C 324 1 18 HELIX 46 AF1 PHE C 336 GLY C 341 5 6 HELIX 47 AF2 GLU C 358 VAL C 376 1 19 SHEET 1 AA1 8 ARG A 55 VAL A 57 0 SHEET 2 AA1 8 VAL A 17 ILE A 19 1 N TYR A 18 O ARG A 55 SHEET 3 AA1 8 VAL A 133 ASN A 136 1 O ILE A 135 N ILE A 19 SHEET 4 AA1 8 ALA A 297 LEU A 301 1 O ILE A 300 N ALA A 134 SHEET 5 AA1 8 ALA A 259 GLN A 263 1 N LEU A 262 O LEU A 299 SHEET 6 AA1 8 ILE A 172 ASP A 176 1 N VAL A 175 O GLN A 263 SHEET 7 AA1 8 VAL A 195 LYS A 202 1 O MET A 196 N TYR A 174 SHEET 8 AA1 8 SER A 226 ILE A 231 1 O VAL A 227 N THR A 197 SHEET 1 AA2 8 ARG B 55 VAL B 57 0 SHEET 2 AA2 8 VAL B 17 ILE B 19 1 N TYR B 18 O ARG B 55 SHEET 3 AA2 8 VAL B 133 ASN B 136 1 O ILE B 135 N ILE B 19 SHEET 4 AA2 8 ALA B 297 LEU B 301 1 O ILE B 300 N ALA B 134 SHEET 5 AA2 8 ALA B 259 GLN B 263 1 N LEU B 262 O LEU B 299 SHEET 6 AA2 8 ILE B 172 ASP B 176 1 N LEU B 173 O VAL B 261 SHEET 7 AA2 8 VAL B 195 LYS B 202 1 O MET B 196 N TYR B 174 SHEET 8 AA2 8 SER B 226 ILE B 231 1 O VAL B 227 N THR B 197 SHEET 1 AA3 8 ARG C 55 VAL C 57 0 SHEET 2 AA3 8 VAL C 17 ILE C 19 1 N TYR C 18 O ARG C 55 SHEET 3 AA3 8 VAL C 133 ASN C 136 1 O ILE C 135 N ILE C 19 SHEET 4 AA3 8 ALA C 297 LEU C 301 1 O ILE C 300 N ALA C 134 SHEET 5 AA3 8 ALA C 259 GLN C 263 1 N LEU C 262 O LEU C 299 SHEET 6 AA3 8 ILE C 172 ASP C 176 1 N LEU C 173 O VAL C 261 SHEET 7 AA3 8 VAL C 195 LYS C 202 1 O MET C 196 N TYR C 174 SHEET 8 AA3 8 SER C 226 ILE C 231 1 O VAL C 227 N THR C 197 LINK O ASP A 176 K K A 403 1555 1555 2.61 LINK OD1 ASP A 176 K K A 403 1555 1555 2.60 LINK OD2 ASP A 178 ZN ZN A 401 1555 1555 1.97 LINK O ASP A 178 K K A 403 1555 1555 2.61 LINK ND1 HIS A 180 ZN ZN A 401 1555 1555 2.16 LINK O HIS A 180 K K A 403 1555 1555 2.63 LINK O PHE A 189 K K A 402 1555 1555 2.59 LINK O THR A 192 K K A 402 1555 1555 2.66 LINK O VAL A 195 K K A 402 1555 1555 2.59 LINK OG SER A 199 K K A 403 1555 1555 2.62 LINK O LEU A 200 K K A 403 1555 1555 2.61 LINK O TYR A 225 K K A 402 1555 1555 2.63 LINK OD2 ASP A 267 ZN ZN A 401 1555 1555 1.95 LINK ZN ZN A 401 O11 M7Y A 404 1555 1555 2.02 LINK ZN ZN A 401 O12 M7Y A 404 1555 1555 2.03 LINK K K A 402 O HOH A 503 1555 1555 2.60 LINK K K A 402 O HOH A 506 1555 1555 2.62 LINK O ASP B 176 K K B 403 1555 1555 2.61 LINK OD1 ASP B 176 K K B 403 1555 1555 2.62 LINK OD2 ASP B 178 ZN ZN B 401 1555 1555 2.04 LINK O ASP B 178 K K B 403 1555 1555 2.61 LINK ND1 HIS B 180 ZN ZN B 401 1555 1555 2.16 LINK O HIS B 180 K K B 403 1555 1555 2.62 LINK O PHE B 189 K K B 402 1555 1555 2.59 LINK O THR B 192 K K B 402 1555 1555 2.64 LINK O VAL B 195 K K B 402 1555 1555 2.60 LINK OG SER B 199 K K B 403 1555 1555 2.63 LINK O LEU B 200 K K B 403 1555 1555 2.60 LINK O TYR B 225 K K B 402 1555 1555 2.62 LINK OD2 ASP B 267 ZN ZN B 401 1555 1555 1.96 LINK ZN ZN B 401 N10 M7Y B 404 1555 1555 2.56 LINK ZN ZN B 401 O11 M7Y B 404 1555 1555 1.99 LINK ZN ZN B 401 O12 M7Y B 404 1555 1555 2.01 LINK K K B 402 O HOH B 506 1555 1555 2.61 LINK K K B 402 O HOH B 520 1555 1555 2.63 LINK O ASP C 176 K K C 403 1555 1555 2.59 LINK OD1 ASP C 176 K K C 403 1555 1555 2.62 LINK OD2 ASP C 178 ZN ZN C 401 1555 1555 1.99 LINK O ASP C 178 K K C 403 1555 1555 2.61 LINK ND1 HIS C 180 ZN ZN C 401 1555 1555 2.13 LINK O HIS C 180 K K C 403 1555 1555 2.63 LINK O PHE C 189 K K C 402 1555 1555 2.57 LINK O THR C 192 K K C 402 1555 1555 2.64 LINK O VAL C 195 K K C 402 1555 1555 2.61 LINK OG SER C 199 K K C 403 1555 1555 2.64 LINK O LEU C 200 K K C 403 1555 1555 2.61 LINK O TYR C 225 K K C 402 1555 1555 2.62 LINK OD2 ASP C 267 ZN ZN C 401 1555 1555 2.01 LINK ZN ZN C 401 N10 M7Y C 404 1555 1555 2.68 LINK ZN ZN C 401 O11 M7Y C 404 1555 1555 2.00 LINK ZN ZN C 401 O12 M7Y C 404 1555 1555 2.03 LINK K K C 402 O HOH C 501 1555 1555 2.60 LINK K K C 402 O HOH C 507 1555 1555 2.63 CISPEP 1 PHE A 208 PRO A 209 0 -6.98 CISPEP 2 GLY A 341 PRO A 342 0 7.55 CISPEP 3 PHE B 208 PRO B 209 0 -6.78 CISPEP 4 GLY B 341 PRO B 342 0 7.81 CISPEP 5 PHE C 208 PRO C 209 0 -7.02 CISPEP 6 GLY C 341 PRO C 342 0 9.24 SITE 1 AC1 4 ASP A 178 HIS A 180 ASP A 267 M7Y A 404 SITE 1 AC2 6 PHE A 189 THR A 192 VAL A 195 TYR A 225 SITE 2 AC2 6 HOH A 503 HOH A 506 SITE 1 AC3 5 ASP A 176 ASP A 178 HIS A 180 SER A 199 SITE 2 AC3 5 LEU A 200 SITE 1 AC4 10 ASP A 101 HIS A 142 HIS A 143 ASP A 178 SITE 2 AC4 10 HIS A 180 PHE A 208 ASP A 267 PRO A 273 SITE 3 AC4 10 TYR A 306 ZN A 401 SITE 1 AC5 4 TYR A 224 TYR A 368 ASN A 372 HIS A 375 SITE 1 AC6 3 GLY A 99 TYR A 100 ALA B 68 SITE 1 AC7 2 ASN A 310 THR A 349 SITE 1 AC8 4 ASP B 178 HIS B 180 ASP B 267 M7Y B 404 SITE 1 AC9 6 PHE B 189 THR B 192 VAL B 195 TYR B 225 SITE 2 AC9 6 HOH B 506 HOH B 520 SITE 1 AD1 5 ASP B 176 ASP B 178 HIS B 180 SER B 199 SITE 2 AD1 5 LEU B 200 SITE 1 AD2 10 HIS B 142 HIS B 143 ASP B 178 HIS B 180 SITE 2 AD2 10 PHE B 208 ASP B 267 PRO B 273 TYR B 306 SITE 3 AD2 10 ZN B 401 HOH B 514 SITE 1 AD3 4 LYS B 289 TYR B 317 VAL B 321 LYS B 325 SITE 1 AD4 4 ASP C 178 HIS C 180 ASP C 267 M7Y C 404 SITE 1 AD5 6 PHE C 189 THR C 192 VAL C 195 TYR C 225 SITE 2 AD5 6 HOH C 501 HOH C 507 SITE 1 AD6 5 ASP C 176 ASP C 178 HIS C 180 SER C 199 SITE 2 AD6 5 LEU C 200 SITE 1 AD7 10 LYS C 33 HIS C 142 HIS C 143 PHE C 152 SITE 2 AD7 10 ASP C 178 HIS C 180 PHE C 208 ASP C 267 SITE 3 AD7 10 TYR C 306 ZN C 401 CRYST1 87.540 91.161 92.574 90.00 94.07 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011423 0.000000 0.000812 0.00000 SCALE2 0.000000 0.010970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010829 0.00000