data_6OIM # _entry.id 6OIM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6OIM WWPDB D_1000240728 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6OIM _pdbx_database_status.recvd_initial_deposition_date 2019-04-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Mohr, C.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0003-4237-2251 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 575 _citation.language ? _citation.page_first 217 _citation.page_last 223 _citation.title 'The clinical KRAS(G12C) inhibitor AMG 510 drives anti-tumour immunity.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-019-1694-1 _citation.pdbx_database_id_PubMed 31666701 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Canon, J.' 1 ? primary 'Rex, K.' 2 ? primary 'Saiki, A.Y.' 3 ? primary 'Mohr, C.' 4 ? primary 'Cooke, K.' 5 ? primary 'Bagal, D.' 6 ? primary 'Gaida, K.' 7 ? primary 'Holt, T.' 8 ? primary 'Knutson, C.G.' 9 ? primary 'Koppada, N.' 10 ? primary 'Lanman, B.A.' 11 ? primary 'Werner, J.' 12 ? primary 'Rapaport, A.S.' 13 ? primary 'San Miguel, T.' 14 ? primary 'Ortiz, R.' 15 ? primary 'Osgood, T.' 16 ? primary 'Sun, J.R.' 17 ? primary 'Zhu, X.' 18 ? primary 'McCarter, J.D.' 19 ? primary 'Volak, L.P.' 20 ? primary 'Houk, B.E.' 21 ? primary 'Fakih, M.G.' 22 ? primary ;O'Neil, B.H. ; 23 ? primary 'Price, T.J.' 24 ? primary 'Falchook, G.S.' 25 ? primary 'Desai, J.' 26 ? primary 'Kuo, J.' 27 ? primary 'Govindan, R.' 28 ? primary 'Hong, D.S.' 29 ? primary 'Ouyang, W.' 30 ? primary 'Henary, H.' 31 ? primary 'Arvedson, T.' 32 ? primary 'Cee, V.J.' 33 ? primary 'Lipford, J.R.' 34 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6OIM _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.868 _cell.length_a_esd ? _cell.length_b 58.417 _cell.length_b_esd ? _cell.length_c 65.884 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OIM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase KRas' 21038.613 1 ? C51S,C80L,C118S ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'AMG 510 (bound form)' 562.610 1 ? ? ? ? 5 water nat water 18.015 207 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKHHHHHHHDEVDGMTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTAGQEEYSA MRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSA KTRQGVDDAFYTLVREIRKHKEK ; _entity_poly.pdbx_seq_one_letter_code_can ;MKHHHHHHHDEVDGMTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTAGQEEYSA MRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSA KTRQGVDDAFYTLVREIRKHKEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 ASP n 1 11 GLU n 1 12 VAL n 1 13 ASP n 1 14 GLY n 1 15 MET n 1 16 THR n 1 17 GLU n 1 18 TYR n 1 19 LYS n 1 20 LEU n 1 21 VAL n 1 22 VAL n 1 23 VAL n 1 24 GLY n 1 25 ALA n 1 26 CYS n 1 27 GLY n 1 28 VAL n 1 29 GLY n 1 30 LYS n 1 31 SER n 1 32 ALA n 1 33 LEU n 1 34 THR n 1 35 ILE n 1 36 GLN n 1 37 LEU n 1 38 ILE n 1 39 GLN n 1 40 ASN n 1 41 HIS n 1 42 PHE n 1 43 VAL n 1 44 ASP n 1 45 GLU n 1 46 TYR n 1 47 ASP n 1 48 PRO n 1 49 THR n 1 50 ILE n 1 51 GLU n 1 52 ASP n 1 53 SER n 1 54 TYR n 1 55 ARG n 1 56 LYS n 1 57 GLN n 1 58 VAL n 1 59 VAL n 1 60 ILE n 1 61 ASP n 1 62 GLY n 1 63 GLU n 1 64 THR n 1 65 SER n 1 66 LEU n 1 67 LEU n 1 68 ASP n 1 69 ILE n 1 70 LEU n 1 71 ASP n 1 72 THR n 1 73 ALA n 1 74 GLY n 1 75 GLN n 1 76 GLU n 1 77 GLU n 1 78 TYR n 1 79 SER n 1 80 ALA n 1 81 MET n 1 82 ARG n 1 83 ASP n 1 84 GLN n 1 85 TYR n 1 86 MET n 1 87 ARG n 1 88 THR n 1 89 GLY n 1 90 GLU n 1 91 GLY n 1 92 PHE n 1 93 LEU n 1 94 LEU n 1 95 VAL n 1 96 PHE n 1 97 ALA n 1 98 ILE n 1 99 ASN n 1 100 ASN n 1 101 THR n 1 102 LYS n 1 103 SER n 1 104 PHE n 1 105 GLU n 1 106 ASP n 1 107 ILE n 1 108 HIS n 1 109 HIS n 1 110 TYR n 1 111 ARG n 1 112 GLU n 1 113 GLN n 1 114 ILE n 1 115 LYS n 1 116 ARG n 1 117 VAL n 1 118 LYS n 1 119 ASP n 1 120 SER n 1 121 GLU n 1 122 ASP n 1 123 VAL n 1 124 PRO n 1 125 MET n 1 126 VAL n 1 127 LEU n 1 128 VAL n 1 129 GLY n 1 130 ASN n 1 131 LYS n 1 132 SER n 1 133 ASP n 1 134 LEU n 1 135 PRO n 1 136 SER n 1 137 ARG n 1 138 THR n 1 139 VAL n 1 140 ASP n 1 141 THR n 1 142 LYS n 1 143 GLN n 1 144 ALA n 1 145 GLN n 1 146 ASP n 1 147 LEU n 1 148 ALA n 1 149 ARG n 1 150 SER n 1 151 TYR n 1 152 GLY n 1 153 ILE n 1 154 PRO n 1 155 PHE n 1 156 ILE n 1 157 GLU n 1 158 THR n 1 159 SER n 1 160 ALA n 1 161 LYS n 1 162 THR n 1 163 ARG n 1 164 GLN n 1 165 GLY n 1 166 VAL n 1 167 ASP n 1 168 ASP n 1 169 ALA n 1 170 PHE n 1 171 TYR n 1 172 THR n 1 173 LEU n 1 174 VAL n 1 175 ARG n 1 176 GLU n 1 177 ILE n 1 178 ARG n 1 179 LYS n 1 180 HIS n 1 181 LYS n 1 182 GLU n 1 183 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 183 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KRAS, KRAS2, RASK2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASK_HUMAN _struct_ref.pdbx_db_accession P01116 _struct_ref.pdbx_db_isoform P01116-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLV REIRKHKEK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6OIM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 15 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 183 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01116 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 169 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 169 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6OIM MET A 1 ? UNP P01116 ? ? 'initiating methionine' -13 1 1 6OIM LYS A 2 ? UNP P01116 ? ? 'expression tag' -12 2 1 6OIM HIS A 3 ? UNP P01116 ? ? 'expression tag' -11 3 1 6OIM HIS A 4 ? UNP P01116 ? ? 'expression tag' -10 4 1 6OIM HIS A 5 ? UNP P01116 ? ? 'expression tag' -9 5 1 6OIM HIS A 6 ? UNP P01116 ? ? 'expression tag' -8 6 1 6OIM HIS A 7 ? UNP P01116 ? ? 'expression tag' -7 7 1 6OIM HIS A 8 ? UNP P01116 ? ? 'expression tag' -6 8 1 6OIM HIS A 9 ? UNP P01116 ? ? 'expression tag' -5 9 1 6OIM ASP A 10 ? UNP P01116 ? ? 'expression tag' -4 10 1 6OIM GLU A 11 ? UNP P01116 ? ? 'expression tag' -3 11 1 6OIM VAL A 12 ? UNP P01116 ? ? 'expression tag' -2 12 1 6OIM ASP A 13 ? UNP P01116 ? ? 'expression tag' -1 13 1 6OIM GLY A 14 ? UNP P01116 ? ? 'expression tag' 0 14 1 6OIM CYS A 26 ? UNP P01116 GLY 12 variant 12 15 1 6OIM SER A 65 ? UNP P01116 CYS 51 'engineered mutation' 51 16 1 6OIM LEU A 94 ? UNP P01116 CYS 80 'engineered mutation' 80 17 1 6OIM SER A 132 ? UNP P01116 CYS 118 'engineered mutation' 118 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MOV non-polymer . 'AMG 510 (bound form)' ;6-fluoro-7-(2-fluoro-6-hydroxyphenyl)-4-[(2S)-2-methyl-4-propanoylpiperazin-1-yl]-1-[4-methyl-2-(propan-2-yl)pyridin-3-yl]pyrido[2,3-d]pyrimidin-2(1H)-one ; 'C30 H32 F2 N6 O3' 562.610 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6OIM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 34.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1mM MgCl2, 0.1M MES pH6.5, 30% PEG4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-04-17 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Single crystal, Si(220)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9774 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9774 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 22.38 _reflns.entry_id 6OIM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19647 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.162 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.000 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.184 _reflns.pdbx_Rpim_I_all 0.085 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.54 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1840 _reflns_shell.percent_possible_all 96.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_Rsym_value 0.521 _reflns_shell.pdbx_chi_squared 1.000 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.596 _reflns_shell.pdbx_Rpim_I_all 0.283 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.797 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.44 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -0.95 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.39 _refine.B_iso_max ? _refine.B_iso_mean 24.801 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6OIM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.65 _refine.ls_d_res_low 30.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18077 _refine.ls_number_reflns_R_free 935 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.99 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18252 _refine.ls_R_factor_R_free 0.21519 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18092 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.109 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.405 _refine.overall_SU_ML 0.081 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 30.00 _refine_hist.number_atoms_solvent 207 _refine_hist.number_atoms_total 1613 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1336 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 0.019 1438 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1345 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.080 2.023 1941 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.675 3.004 3055 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.171 5.000 165 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.111 24.328 67 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.968 15.000 251 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.394 15.000 10 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.052 0.200 212 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 1582 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 311 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.829 2.292 666 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.829 2.291 665 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.453 3.428 829 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.452 3.430 830 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 0.981 2.516 772 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 0.980 2.515 771 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 1.662 3.709 1111 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.121 20.339 1856 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 3.734 19.547 1742 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_R_work 1297 _refine_ls_shell.percent_reflns_obs 94.73 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.216 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.247 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6OIM _struct.title 'Crystal Structure of human KRAS G12C covalently bound to AMG 510' _struct.pdbx_descriptor 'GTPase KRas' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6OIM _struct_keywords.text 'Inhibitor, GTPase, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 29 ? ASN A 40 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 AA2 SER A 79 ? THR A 88 ? SER A 65 THR A 74 1 ? 10 HELX_P HELX_P3 AA3 ASN A 100 ? ASP A 106 ? ASN A 86 ASP A 92 1 ? 7 HELX_P HELX_P4 AA4 ASP A 106 ? LYS A 118 ? ASP A 92 LYS A 104 1 ? 13 HELX_P HELX_P5 AA5 ASP A 140 ? GLY A 152 ? ASP A 126 GLY A 138 1 ? 13 HELX_P HELX_P6 AA6 GLY A 165 ? LYS A 183 ? GLY A 151 LYS A 169 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale none ? A CYS 26 SG ? ? ? 1_555 D MOV . C25 ? ? A CYS 12 A MOV 303 1_555 ? ? ? ? ? ? ? 1.805 ? metalc1 metalc ? ? A SER 31 OG ? ? ? 1_555 B MG . MG ? ? A SER 17 A MG 301 1_555 ? ? ? ? ? ? ? 2.164 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 440 1_555 ? ? ? ? ? ? ? 2.166 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 447 1_555 ? ? ? ? ? ? ? 2.164 ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C GDP . O2B ? ? A MG 301 A GDP 302 1_555 ? ? ? ? ? ? ? 2.157 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 405 1_555 ? ? ? ? ? ? ? 2.161 ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 415 1_555 ? ? ? ? ? ? ? 2.166 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 52 ? ILE A 60 ? ASP A 38 ILE A 46 AA1 2 GLU A 63 ? ASP A 71 ? GLU A 49 ASP A 57 AA1 3 MET A 15 ? VAL A 23 ? MET A 1 VAL A 9 AA1 4 GLY A 91 ? ALA A 97 ? GLY A 77 ALA A 83 AA1 5 MET A 125 ? ASN A 130 ? MET A 111 ASN A 116 AA1 6 PHE A 155 ? GLU A 157 ? PHE A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 58 ? N VAL A 44 O SER A 65 ? O SER A 51 AA1 2 3 O ASP A 68 ? O ASP A 54 N LEU A 20 ? N LEU A 6 AA1 3 4 N VAL A 23 ? N VAL A 9 O VAL A 95 ? O VAL A 81 AA1 4 5 N LEU A 94 ? N LEU A 80 O VAL A 128 ? O VAL A 114 AA1 5 6 N LEU A 127 ? N LEU A 113 O ILE A 156 ? O ILE A 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 301 ? 6 'binding site for residue MG A 301' AC2 Software A GDP 302 ? 26 'binding site for residue GDP A 302' AC3 Software A MOV 303 ? 21 'binding site for residue MOV A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 31 ? SER A 17 . ? 1_555 ? 2 AC1 6 GDP C . ? GDP A 302 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH A 405 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 415 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH A 440 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 447 . ? 1_555 ? 7 AC2 26 GLY A 27 ? GLY A 13 . ? 1_555 ? 8 AC2 26 VAL A 28 ? VAL A 14 . ? 1_555 ? 9 AC2 26 GLY A 29 ? GLY A 15 . ? 1_555 ? 10 AC2 26 LYS A 30 ? LYS A 16 . ? 1_555 ? 11 AC2 26 SER A 31 ? SER A 17 . ? 1_555 ? 12 AC2 26 ALA A 32 ? ALA A 18 . ? 1_555 ? 13 AC2 26 PHE A 42 ? PHE A 28 . ? 1_555 ? 14 AC2 26 ASP A 44 ? ASP A 30 . ? 1_555 ? 15 AC2 26 ASN A 130 ? ASN A 116 . ? 1_555 ? 16 AC2 26 LYS A 131 ? LYS A 117 . ? 1_555 ? 17 AC2 26 ASP A 133 ? ASP A 119 . ? 1_555 ? 18 AC2 26 LEU A 134 ? LEU A 120 . ? 1_555 ? 19 AC2 26 SER A 159 ? SER A 145 . ? 1_555 ? 20 AC2 26 ALA A 160 ? ALA A 146 . ? 1_555 ? 21 AC2 26 LYS A 161 ? LYS A 147 . ? 1_555 ? 22 AC2 26 MG B . ? MG A 301 . ? 1_555 ? 23 AC2 26 MOV D . ? MOV A 303 . ? 1_555 ? 24 AC2 26 HOH E . ? HOH A 408 . ? 1_555 ? 25 AC2 26 HOH E . ? HOH A 414 . ? 1_555 ? 26 AC2 26 HOH E . ? HOH A 415 . ? 1_555 ? 27 AC2 26 HOH E . ? HOH A 428 . ? 1_555 ? 28 AC2 26 HOH E . ? HOH A 440 . ? 1_555 ? 29 AC2 26 HOH E . ? HOH A 451 . ? 1_455 ? 30 AC2 26 HOH E . ? HOH A 468 . ? 1_555 ? 31 AC2 26 HOH E . ? HOH A 501 . ? 1_555 ? 32 AC2 26 HOH E . ? HOH A 523 . ? 1_555 ? 33 AC3 21 VAL A 23 ? VAL A 9 . ? 1_555 ? 34 AC3 21 GLY A 24 ? GLY A 10 . ? 1_555 ? 35 AC3 21 CYS A 26 ? CYS A 12 . ? 1_555 ? 36 AC3 21 LYS A 30 ? LYS A 16 . ? 1_555 ? 37 AC3 21 PRO A 48 ? PRO A 34 . ? 1_555 ? 38 AC3 21 ALA A 73 ? ALA A 59 . ? 1_555 ? 39 AC3 21 GLY A 74 ? GLY A 60 . ? 1_555 ? 40 AC3 21 GLN A 75 ? GLN A 61 . ? 1_555 ? 41 AC3 21 GLU A 76 ? GLU A 62 . ? 1_555 ? 42 AC3 21 GLU A 77 ? GLU A 63 . ? 1_555 ? 43 AC3 21 ARG A 82 ? ARG A 68 . ? 1_555 ? 44 AC3 21 MET A 86 ? MET A 72 . ? 1_555 ? 45 AC3 21 HIS A 109 ? HIS A 95 . ? 1_555 ? 46 AC3 21 TYR A 110 ? TYR A 96 . ? 1_555 ? 47 AC3 21 GLN A 113 ? GLN A 99 . ? 1_555 ? 48 AC3 21 VAL A 117 ? VAL A 103 . ? 1_555 ? 49 AC3 21 GDP C . ? GDP A 302 . ? 1_555 ? 50 AC3 21 HOH E . ? HOH A 440 . ? 1_555 ? 51 AC3 21 HOH E . ? HOH A 442 . ? 1_555 ? 52 AC3 21 HOH E . ? HOH A 477 . ? 1_555 ? 53 AC3 21 HOH E . ? HOH A 551 . ? 1_555 ? # _atom_sites.entry_id 6OIM _atom_sites.fract_transf_matrix[1][1] 0.024469 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017118 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015178 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -13 ? ? ? A . n A 1 2 LYS 2 -12 ? ? ? A . n A 1 3 HIS 3 -11 ? ? ? A . n A 1 4 HIS 4 -10 ? ? ? A . n A 1 5 HIS 5 -9 ? ? ? A . n A 1 6 HIS 6 -8 ? ? ? A . n A 1 7 HIS 7 -7 ? ? ? A . n A 1 8 HIS 8 -6 ? ? ? A . n A 1 9 HIS 9 -5 ? ? ? A . n A 1 10 ASP 10 -4 ? ? ? A . n A 1 11 GLU 11 -3 ? ? ? A . n A 1 12 VAL 12 -2 ? ? ? A . n A 1 13 ASP 13 -1 ? ? ? A . n A 1 14 GLY 14 0 0 GLY GLY A . n A 1 15 MET 15 1 1 MET MET A . n A 1 16 THR 16 2 2 THR THR A . n A 1 17 GLU 17 3 3 GLU GLU A . n A 1 18 TYR 18 4 4 TYR TYR A . n A 1 19 LYS 19 5 5 LYS LYS A . n A 1 20 LEU 20 6 6 LEU LEU A . n A 1 21 VAL 21 7 7 VAL VAL A . n A 1 22 VAL 22 8 8 VAL VAL A . n A 1 23 VAL 23 9 9 VAL VAL A . n A 1 24 GLY 24 10 10 GLY GLY A . n A 1 25 ALA 25 11 11 ALA ALA A . n A 1 26 CYS 26 12 12 CYS CYS A . n A 1 27 GLY 27 13 13 GLY GLY A . n A 1 28 VAL 28 14 14 VAL VAL A . n A 1 29 GLY 29 15 15 GLY GLY A . n A 1 30 LYS 30 16 16 LYS LYS A . n A 1 31 SER 31 17 17 SER SER A . n A 1 32 ALA 32 18 18 ALA ALA A . n A 1 33 LEU 33 19 19 LEU LEU A . n A 1 34 THR 34 20 20 THR THR A . n A 1 35 ILE 35 21 21 ILE ILE A . n A 1 36 GLN 36 22 22 GLN GLN A . n A 1 37 LEU 37 23 23 LEU LEU A . n A 1 38 ILE 38 24 24 ILE ILE A . n A 1 39 GLN 39 25 25 GLN GLN A . n A 1 40 ASN 40 26 26 ASN ASN A . n A 1 41 HIS 41 27 27 HIS HIS A . n A 1 42 PHE 42 28 28 PHE PHE A . n A 1 43 VAL 43 29 29 VAL VAL A . n A 1 44 ASP 44 30 30 ASP ASP A . n A 1 45 GLU 45 31 31 GLU GLU A . n A 1 46 TYR 46 32 32 TYR TYR A . n A 1 47 ASP 47 33 33 ASP ASP A . n A 1 48 PRO 48 34 34 PRO PRO A . n A 1 49 THR 49 35 35 THR THR A . n A 1 50 ILE 50 36 36 ILE ILE A . n A 1 51 GLU 51 37 37 GLU GLU A . n A 1 52 ASP 52 38 38 ASP ASP A . n A 1 53 SER 53 39 39 SER SER A . n A 1 54 TYR 54 40 40 TYR TYR A . n A 1 55 ARG 55 41 41 ARG ARG A . n A 1 56 LYS 56 42 42 LYS LYS A . n A 1 57 GLN 57 43 43 GLN GLN A . n A 1 58 VAL 58 44 44 VAL VAL A . n A 1 59 VAL 59 45 45 VAL VAL A . n A 1 60 ILE 60 46 46 ILE ILE A . n A 1 61 ASP 61 47 47 ASP ASP A . n A 1 62 GLY 62 48 48 GLY GLY A . n A 1 63 GLU 63 49 49 GLU GLU A . n A 1 64 THR 64 50 50 THR THR A . n A 1 65 SER 65 51 51 SER SER A . n A 1 66 LEU 66 52 52 LEU LEU A . n A 1 67 LEU 67 53 53 LEU LEU A . n A 1 68 ASP 68 54 54 ASP ASP A . n A 1 69 ILE 69 55 55 ILE ILE A . n A 1 70 LEU 70 56 56 LEU LEU A . n A 1 71 ASP 71 57 57 ASP ASP A . n A 1 72 THR 72 58 58 THR THR A . n A 1 73 ALA 73 59 59 ALA ALA A . n A 1 74 GLY 74 60 60 GLY GLY A . n A 1 75 GLN 75 61 61 GLN GLN A . n A 1 76 GLU 76 62 62 GLU GLU A . n A 1 77 GLU 77 63 63 GLU GLU A . n A 1 78 TYR 78 64 64 TYR TYR A . n A 1 79 SER 79 65 65 SER SER A . n A 1 80 ALA 80 66 66 ALA ALA A . n A 1 81 MET 81 67 67 MET MET A . n A 1 82 ARG 82 68 68 ARG ARG A . n A 1 83 ASP 83 69 69 ASP ASP A . n A 1 84 GLN 84 70 70 GLN GLN A . n A 1 85 TYR 85 71 71 TYR TYR A . n A 1 86 MET 86 72 72 MET MET A . n A 1 87 ARG 87 73 73 ARG ARG A . n A 1 88 THR 88 74 74 THR THR A . n A 1 89 GLY 89 75 75 GLY GLY A . n A 1 90 GLU 90 76 76 GLU GLU A . n A 1 91 GLY 91 77 77 GLY GLY A . n A 1 92 PHE 92 78 78 PHE PHE A . n A 1 93 LEU 93 79 79 LEU LEU A . n A 1 94 LEU 94 80 80 LEU LEU A . n A 1 95 VAL 95 81 81 VAL VAL A . n A 1 96 PHE 96 82 82 PHE PHE A . n A 1 97 ALA 97 83 83 ALA ALA A . n A 1 98 ILE 98 84 84 ILE ILE A . n A 1 99 ASN 99 85 85 ASN ASN A . n A 1 100 ASN 100 86 86 ASN ASN A . n A 1 101 THR 101 87 87 THR THR A . n A 1 102 LYS 102 88 88 LYS LYS A . n A 1 103 SER 103 89 89 SER SER A . n A 1 104 PHE 104 90 90 PHE PHE A . n A 1 105 GLU 105 91 91 GLU GLU A . n A 1 106 ASP 106 92 92 ASP ASP A . n A 1 107 ILE 107 93 93 ILE ILE A . n A 1 108 HIS 108 94 94 HIS HIS A . n A 1 109 HIS 109 95 95 HIS HIS A . n A 1 110 TYR 110 96 96 TYR TYR A . n A 1 111 ARG 111 97 97 ARG ARG A . n A 1 112 GLU 112 98 98 GLU GLU A . n A 1 113 GLN 113 99 99 GLN GLN A . n A 1 114 ILE 114 100 100 ILE ILE A . n A 1 115 LYS 115 101 101 LYS LYS A . n A 1 116 ARG 116 102 102 ARG ARG A . n A 1 117 VAL 117 103 103 VAL VAL A . n A 1 118 LYS 118 104 104 LYS LYS A . n A 1 119 ASP 119 105 ? ? ? A . n A 1 120 SER 120 106 ? ? ? A . n A 1 121 GLU 121 107 ? ? ? A . n A 1 122 ASP 122 108 108 ASP ASP A . n A 1 123 VAL 123 109 109 VAL VAL A . n A 1 124 PRO 124 110 110 PRO PRO A . n A 1 125 MET 125 111 111 MET MET A . n A 1 126 VAL 126 112 112 VAL VAL A . n A 1 127 LEU 127 113 113 LEU LEU A . n A 1 128 VAL 128 114 114 VAL VAL A . n A 1 129 GLY 129 115 115 GLY GLY A . n A 1 130 ASN 130 116 116 ASN ASN A . n A 1 131 LYS 131 117 117 LYS LYS A . n A 1 132 SER 132 118 118 SER SER A . n A 1 133 ASP 133 119 119 ASP ASP A . n A 1 134 LEU 134 120 120 LEU LEU A . n A 1 135 PRO 135 121 121 PRO PRO A . n A 1 136 SER 136 122 122 SER SER A . n A 1 137 ARG 137 123 123 ARG ARG A . n A 1 138 THR 138 124 124 THR THR A . n A 1 139 VAL 139 125 125 VAL VAL A . n A 1 140 ASP 140 126 126 ASP ASP A . n A 1 141 THR 141 127 127 THR THR A . n A 1 142 LYS 142 128 128 LYS LYS A . n A 1 143 GLN 143 129 129 GLN GLN A . n A 1 144 ALA 144 130 130 ALA ALA A . n A 1 145 GLN 145 131 131 GLN GLN A . n A 1 146 ASP 146 132 132 ASP ASP A . n A 1 147 LEU 147 133 133 LEU LEU A . n A 1 148 ALA 148 134 134 ALA ALA A . n A 1 149 ARG 149 135 135 ARG ARG A . n A 1 150 SER 150 136 136 SER SER A . n A 1 151 TYR 151 137 137 TYR TYR A . n A 1 152 GLY 152 138 138 GLY GLY A . n A 1 153 ILE 153 139 139 ILE ILE A . n A 1 154 PRO 154 140 140 PRO PRO A . n A 1 155 PHE 155 141 141 PHE PHE A . n A 1 156 ILE 156 142 142 ILE ILE A . n A 1 157 GLU 157 143 143 GLU GLU A . n A 1 158 THR 158 144 144 THR THR A . n A 1 159 SER 159 145 145 SER SER A . n A 1 160 ALA 160 146 146 ALA ALA A . n A 1 161 LYS 161 147 147 LYS LYS A . n A 1 162 THR 162 148 148 THR THR A . n A 1 163 ARG 163 149 149 ARG ARG A . n A 1 164 GLN 164 150 150 GLN GLN A . n A 1 165 GLY 165 151 151 GLY GLY A . n A 1 166 VAL 166 152 152 VAL VAL A . n A 1 167 ASP 167 153 153 ASP ASP A . n A 1 168 ASP 168 154 154 ASP ASP A . n A 1 169 ALA 169 155 155 ALA ALA A . n A 1 170 PHE 170 156 156 PHE PHE A . n A 1 171 TYR 171 157 157 TYR TYR A . n A 1 172 THR 172 158 158 THR THR A . n A 1 173 LEU 173 159 159 LEU LEU A . n A 1 174 VAL 174 160 160 VAL VAL A . n A 1 175 ARG 175 161 161 ARG ARG A . n A 1 176 GLU 176 162 162 GLU GLU A . n A 1 177 ILE 177 163 163 ILE ILE A . n A 1 178 ARG 178 164 164 ARG ARG A . n A 1 179 LYS 179 165 165 LYS LYS A . n A 1 180 HIS 180 166 166 HIS HIS A . n A 1 181 LYS 181 167 167 LYS LYS A . n A 1 182 GLU 182 168 168 GLU GLU A . n A 1 183 LYS 183 169 169 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 301 MG MG A . C 3 GDP 1 302 501 GDP GDP A . D 4 MOV 1 303 701 MOV UNL A . E 5 HOH 1 401 179 HOH HOH A . E 5 HOH 2 402 48 HOH HOH A . E 5 HOH 3 403 149 HOH HOH A . E 5 HOH 4 404 107 HOH HOH A . E 5 HOH 5 405 403 HOH HOH A . E 5 HOH 6 406 111 HOH HOH A . E 5 HOH 7 407 67 HOH HOH A . E 5 HOH 8 408 65 HOH HOH A . E 5 HOH 9 409 2 HOH HOH A . E 5 HOH 10 410 86 HOH HOH A . E 5 HOH 11 411 11 HOH HOH A . E 5 HOH 12 412 18 HOH HOH A . E 5 HOH 13 413 8 HOH HOH A . E 5 HOH 14 414 56 HOH HOH A . E 5 HOH 15 415 401 HOH HOH A . E 5 HOH 16 416 37 HOH HOH A . E 5 HOH 17 417 61 HOH HOH A . E 5 HOH 18 418 66 HOH HOH A . E 5 HOH 19 419 26 HOH HOH A . E 5 HOH 20 420 81 HOH HOH A . E 5 HOH 21 421 178 HOH HOH A . E 5 HOH 22 422 43 HOH HOH A . E 5 HOH 23 423 123 HOH HOH A . E 5 HOH 24 424 84 HOH HOH A . E 5 HOH 25 425 28 HOH HOH A . E 5 HOH 26 426 70 HOH HOH A . E 5 HOH 27 427 85 HOH HOH A . E 5 HOH 28 428 57 HOH HOH A . E 5 HOH 29 429 114 HOH HOH A . E 5 HOH 30 430 36 HOH HOH A . E 5 HOH 31 431 55 HOH HOH A . E 5 HOH 32 432 187 HOH HOH A . E 5 HOH 33 433 80 HOH HOH A . E 5 HOH 34 434 129 HOH HOH A . E 5 HOH 35 435 125 HOH HOH A . E 5 HOH 36 436 38 HOH HOH A . E 5 HOH 37 437 90 HOH HOH A . E 5 HOH 38 438 139 HOH HOH A . E 5 HOH 39 439 113 HOH HOH A . E 5 HOH 40 440 404 HOH HOH A . E 5 HOH 41 441 92 HOH HOH A . E 5 HOH 42 442 68 HOH HOH A . E 5 HOH 43 443 27 HOH HOH A . E 5 HOH 44 444 74 HOH HOH A . E 5 HOH 45 445 39 HOH HOH A . E 5 HOH 46 446 49 HOH HOH A . E 5 HOH 47 447 402 HOH HOH A . E 5 HOH 48 448 112 HOH HOH A . E 5 HOH 49 449 6 HOH HOH A . E 5 HOH 50 450 13 HOH HOH A . E 5 HOH 51 451 98 HOH HOH A . E 5 HOH 52 452 29 HOH HOH A . E 5 HOH 53 453 188 HOH HOH A . E 5 HOH 54 454 116 HOH HOH A . E 5 HOH 55 455 30 HOH HOH A . E 5 HOH 56 456 195 HOH HOH A . E 5 HOH 57 457 25 HOH HOH A . E 5 HOH 58 458 5 HOH HOH A . E 5 HOH 59 459 102 HOH HOH A . E 5 HOH 60 460 14 HOH HOH A . E 5 HOH 61 461 137 HOH HOH A . E 5 HOH 62 462 4 HOH HOH A . E 5 HOH 63 463 180 HOH HOH A . E 5 HOH 64 464 21 HOH HOH A . E 5 HOH 65 465 69 HOH HOH A . E 5 HOH 66 466 41 HOH HOH A . E 5 HOH 67 467 150 HOH HOH A . E 5 HOH 68 468 19 HOH HOH A . E 5 HOH 69 469 52 HOH HOH A . E 5 HOH 70 470 83 HOH HOH A . E 5 HOH 71 471 63 HOH HOH A . E 5 HOH 72 472 198 HOH HOH A . E 5 HOH 73 473 115 HOH HOH A . E 5 HOH 74 474 72 HOH HOH A . E 5 HOH 75 475 78 HOH HOH A . E 5 HOH 76 476 73 HOH HOH A . E 5 HOH 77 477 53 HOH HOH A . E 5 HOH 78 478 190 HOH HOH A . E 5 HOH 79 479 22 HOH HOH A . E 5 HOH 80 480 12 HOH HOH A . E 5 HOH 81 481 101 HOH HOH A . E 5 HOH 82 482 158 HOH HOH A . E 5 HOH 83 483 155 HOH HOH A . E 5 HOH 84 484 59 HOH HOH A . E 5 HOH 85 485 9 HOH HOH A . E 5 HOH 86 486 197 HOH HOH A . E 5 HOH 87 487 42 HOH HOH A . E 5 HOH 88 488 24 HOH HOH A . E 5 HOH 89 489 136 HOH HOH A . E 5 HOH 90 490 88 HOH HOH A . E 5 HOH 91 491 99 HOH HOH A . E 5 HOH 92 492 193 HOH HOH A . E 5 HOH 93 493 62 HOH HOH A . E 5 HOH 94 494 124 HOH HOH A . E 5 HOH 95 495 194 HOH HOH A . E 5 HOH 96 496 199 HOH HOH A . E 5 HOH 97 497 1 HOH HOH A . E 5 HOH 98 498 154 HOH HOH A . E 5 HOH 99 499 16 HOH HOH A . E 5 HOH 100 500 196 HOH HOH A . E 5 HOH 101 501 32 HOH HOH A . E 5 HOH 102 502 135 HOH HOH A . E 5 HOH 103 503 97 HOH HOH A . E 5 HOH 104 504 31 HOH HOH A . E 5 HOH 105 505 118 HOH HOH A . E 5 HOH 106 506 200 HOH HOH A . E 5 HOH 107 507 175 HOH HOH A . E 5 HOH 108 508 100 HOH HOH A . E 5 HOH 109 509 35 HOH HOH A . E 5 HOH 110 510 71 HOH HOH A . E 5 HOH 111 511 138 HOH HOH A . E 5 HOH 112 512 15 HOH HOH A . E 5 HOH 113 513 110 HOH HOH A . E 5 HOH 114 514 46 HOH HOH A . E 5 HOH 115 515 50 HOH HOH A . E 5 HOH 116 516 23 HOH HOH A . E 5 HOH 117 517 10 HOH HOH A . E 5 HOH 118 518 7 HOH HOH A . E 5 HOH 119 519 160 HOH HOH A . E 5 HOH 120 520 76 HOH HOH A . E 5 HOH 121 521 95 HOH HOH A . E 5 HOH 122 522 91 HOH HOH A . E 5 HOH 123 523 51 HOH HOH A . E 5 HOH 124 524 45 HOH HOH A . E 5 HOH 125 525 96 HOH HOH A . E 5 HOH 126 526 130 HOH HOH A . E 5 HOH 127 527 141 HOH HOH A . E 5 HOH 128 528 152 HOH HOH A . E 5 HOH 129 529 104 HOH HOH A . E 5 HOH 130 530 189 HOH HOH A . E 5 HOH 131 531 127 HOH HOH A . E 5 HOH 132 532 60 HOH HOH A . E 5 HOH 133 533 145 HOH HOH A . E 5 HOH 134 534 186 HOH HOH A . E 5 HOH 135 535 87 HOH HOH A . E 5 HOH 136 536 119 HOH HOH A . E 5 HOH 137 537 134 HOH HOH A . E 5 HOH 138 538 20 HOH HOH A . E 5 HOH 139 539 3 HOH HOH A . E 5 HOH 140 540 17 HOH HOH A . E 5 HOH 141 541 159 HOH HOH A . E 5 HOH 142 542 77 HOH HOH A . E 5 HOH 143 543 75 HOH HOH A . E 5 HOH 144 544 148 HOH HOH A . E 5 HOH 145 545 103 HOH HOH A . E 5 HOH 146 546 184 HOH HOH A . E 5 HOH 147 547 40 HOH HOH A . E 5 HOH 148 548 108 HOH HOH A . E 5 HOH 149 549 58 HOH HOH A . E 5 HOH 150 550 131 HOH HOH A . E 5 HOH 151 551 156 HOH HOH A . E 5 HOH 152 552 44 HOH HOH A . E 5 HOH 153 553 94 HOH HOH A . E 5 HOH 154 554 151 HOH HOH A . E 5 HOH 155 555 121 HOH HOH A . E 5 HOH 156 556 163 HOH HOH A . E 5 HOH 157 557 185 HOH HOH A . E 5 HOH 158 558 174 HOH HOH A . E 5 HOH 159 559 146 HOH HOH A . E 5 HOH 160 560 192 HOH HOH A . E 5 HOH 161 561 201 HOH HOH A . E 5 HOH 162 562 120 HOH HOH A . E 5 HOH 163 563 166 HOH HOH A . E 5 HOH 164 564 171 HOH HOH A . E 5 HOH 165 565 191 HOH HOH A . E 5 HOH 166 566 109 HOH HOH A . E 5 HOH 167 567 82 HOH HOH A . E 5 HOH 168 568 169 HOH HOH A . E 5 HOH 169 569 183 HOH HOH A . E 5 HOH 170 570 172 HOH HOH A . E 5 HOH 171 571 168 HOH HOH A . E 5 HOH 172 572 177 HOH HOH A . E 5 HOH 173 573 203 HOH HOH A . E 5 HOH 174 574 142 HOH HOH A . E 5 HOH 175 575 34 HOH HOH A . E 5 HOH 176 576 173 HOH HOH A . E 5 HOH 177 577 147 HOH HOH A . E 5 HOH 178 578 128 HOH HOH A . E 5 HOH 179 579 181 HOH HOH A . E 5 HOH 180 580 105 HOH HOH A . E 5 HOH 181 581 161 HOH HOH A . E 5 HOH 182 582 33 HOH HOH A . E 5 HOH 183 583 47 HOH HOH A . E 5 HOH 184 584 164 HOH HOH A . E 5 HOH 185 585 117 HOH HOH A . E 5 HOH 186 586 64 HOH HOH A . E 5 HOH 187 587 182 HOH HOH A . E 5 HOH 188 588 79 HOH HOH A . E 5 HOH 189 589 157 HOH HOH A . E 5 HOH 190 590 153 HOH HOH A . E 5 HOH 191 591 144 HOH HOH A . E 5 HOH 192 592 170 HOH HOH A . E 5 HOH 193 593 140 HOH HOH A . E 5 HOH 194 594 126 HOH HOH A . E 5 HOH 195 595 93 HOH HOH A . E 5 HOH 196 596 165 HOH HOH A . E 5 HOH 197 597 54 HOH HOH A . E 5 HOH 198 598 132 HOH HOH A . E 5 HOH 199 599 89 HOH HOH A . E 5 HOH 200 600 122 HOH HOH A . E 5 HOH 201 601 162 HOH HOH A . E 5 HOH 202 602 106 HOH HOH A . E 5 HOH 203 603 202 HOH HOH A . E 5 HOH 204 604 133 HOH HOH A . E 5 HOH 205 605 167 HOH HOH A . E 5 HOH 206 606 143 HOH HOH A . E 5 HOH 207 607 176 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 31 ? A SER 17 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 440 ? 1_555 175.1 ? 2 OG ? A SER 31 ? A SER 17 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 90.2 ? 3 O ? E HOH . ? A HOH 440 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 89.8 ? 4 OG ? A SER 31 ? A SER 17 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2B ? C GDP . ? A GDP 302 ? 1_555 90.5 ? 5 O ? E HOH . ? A HOH 440 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2B ? C GDP . ? A GDP 302 ? 1_555 90.1 ? 6 O ? E HOH . ? A HOH 447 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2B ? C GDP . ? A GDP 302 ? 1_555 172.4 ? 7 OG ? A SER 31 ? A SER 17 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 85.0 ? 8 O ? E HOH . ? A HOH 440 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 90.1 ? 9 O ? E HOH . ? A HOH 447 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 93.9 ? 10 O2B ? C GDP . ? A GDP 302 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 93.7 ? 11 OG ? A SER 31 ? A SER 17 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 415 ? 1_555 89.0 ? 12 O ? E HOH . ? A HOH 440 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 415 ? 1_555 95.9 ? 13 O ? E HOH . ? A HOH 447 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 415 ? 1_555 86.1 ? 14 O2B ? C GDP . ? A GDP 302 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 415 ? 1_555 86.3 ? 15 O ? E HOH . ? A HOH 405 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 415 ? 1_555 174.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-11-06 2 'Structure model' 1 1 2019-11-13 3 'Structure model' 1 2 2019-11-27 4 'Structure model' 1 3 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_entity_nonpoly # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.name' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_chem_comp.name' 8 4 'Structure model' '_chem_comp.pdbx_synonyms' 9 4 'Structure model' '_entity.pdbx_description' 10 4 'Structure model' '_pdbx_entity_nonpoly.name' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? BOS ? ? ? v3 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? v717 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? v2.3.9 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? v717 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? v2.3.9 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? v11.2.08 6 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 7 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? v0.7.2 8 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? -35.16 113.36 2 1 ALA A 59 ? ? -154.24 -24.49 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 607 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.08 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -13 ? A MET 1 2 1 Y 1 A LYS -12 ? A LYS 2 3 1 Y 1 A HIS -11 ? A HIS 3 4 1 Y 1 A HIS -10 ? A HIS 4 5 1 Y 1 A HIS -9 ? A HIS 5 6 1 Y 1 A HIS -8 ? A HIS 6 7 1 Y 1 A HIS -7 ? A HIS 7 8 1 Y 1 A HIS -6 ? A HIS 8 9 1 Y 1 A HIS -5 ? A HIS 9 10 1 Y 1 A ASP -4 ? A ASP 10 11 1 Y 1 A GLU -3 ? A GLU 11 12 1 Y 1 A VAL -2 ? A VAL 12 13 1 Y 1 A ASP -1 ? A ASP 13 14 1 Y 1 A ASP 105 ? A ASP 119 15 1 Y 1 A SER 106 ? A SER 120 16 1 Y 1 A GLU 107 ? A GLU 121 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'AMG 510 (bound form)' MOV 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #