HEADER TRANSFERASE 12-APR-19 6OKG TITLE CROSSLINKED CRYSTAL STRUCTURE OF TYPE II FATTY ACID SYNTHASE TITLE 2 KETOSYNTHASE, FABF, AND C16-CRYPTO ACYL CARRIER PROTEIN, ACPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE II,BETA-KETOACYL- COMPND 5 ACP SYNTHASE II,KAS II; COMPND 6 EC: 2.3.1.179; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ACYL CARRIER PROTEIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ACP,CYTOSOLIC-ACTIVATING FACTOR,CAF,FATTY ACID SYNTHASE ACYL COMPND 12 CARRIER PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: FABF, FABJ, B1095, JW1081; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 13 ORGANISM_TAXID: 83333; SOURCE 14 STRAIN: K12; SOURCE 15 GENE: ACPP, B1094, JW1080; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS THIOLASE, KETOSYNTHASE, KS, ACPP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.T.MINDREBO,W.E.KIM,T.G.BARTHOLOW,A.CHEN,T.D.DAVIS,J.LA CLAIR, AUTHOR 2 M.D.BURKART,J.P.NOEL REVDAT 3 06-NOV-24 6OKG 1 REMARK REVDAT 2 11-OCT-23 6OKG 1 LINK REVDAT 1 22-APR-20 6OKG 0 JRNL AUTH J.T.MINDREBO,A.PATEL,W.E.KIM,T.D.DAVIS,A.CHEN,T.G.BARTHOLOW, JRNL AUTH 2 J.J.LA CLAIR,J.A.MCCAMMON,J.P.NOEL,M.D.BURKART JRNL TITL GATING MECHANISM OF ELONGATING BETA-KETOACYL-ACP SYNTHASES. JRNL REF NAT COMMUN V. 11 1727 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32265440 JRNL DOI 10.1038/S41467-020-15455-X REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 19953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 69.0759 - 4.3996 1.00 2892 152 0.1633 0.1936 REMARK 3 2 4.3996 - 3.4921 1.00 2721 143 0.1563 0.1737 REMARK 3 3 3.4921 - 3.0507 1.00 2698 141 0.1893 0.2220 REMARK 3 4 3.0507 - 2.7717 1.00 2676 141 0.2205 0.3246 REMARK 3 5 2.7717 - 2.5731 1.00 2670 141 0.2426 0.2933 REMARK 3 6 2.5731 - 2.4213 1.00 2644 139 0.2391 0.2596 REMARK 3 7 2.4213 - 2.3001 1.00 2655 140 0.2757 0.2943 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8825 -9.2250 -11.6393 REMARK 3 T TENSOR REMARK 3 T11: 0.2396 T22: 0.1411 REMARK 3 T33: 0.1366 T12: -0.0024 REMARK 3 T13: 0.0184 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.8960 L22: 0.5925 REMARK 3 L33: 1.0604 L12: -0.0209 REMARK 3 L13: 0.1773 L23: -0.2087 REMARK 3 S TENSOR REMARK 3 S11: 0.0771 S12: -0.0469 S13: -0.1715 REMARK 3 S21: 0.1451 S22: -0.0695 S23: 0.1134 REMARK 3 S31: 0.1319 S32: -0.0413 S33: 0.0227 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6998 5.3442 -8.8184 REMARK 3 T TENSOR REMARK 3 T11: 0.2733 T22: 0.2228 REMARK 3 T33: 0.2678 T12: 0.0237 REMARK 3 T13: 0.0299 T23: -0.0736 REMARK 3 L TENSOR REMARK 3 L11: 3.8714 L22: 1.4902 REMARK 3 L33: 1.0141 L12: 2.4059 REMARK 3 L13: 0.9691 L23: 0.4851 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: -0.5031 S13: 0.3424 REMARK 3 S21: 0.2042 S22: -0.1963 S23: 0.2619 REMARK 3 S31: -0.1223 S32: -0.0148 S33: 0.1475 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9377 4.7607 -17.8517 REMARK 3 T TENSOR REMARK 3 T11: 0.1272 T22: 0.1515 REMARK 3 T33: 0.1841 T12: -0.0177 REMARK 3 T13: 0.0088 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 0.8785 L22: 1.6897 REMARK 3 L33: 2.1027 L12: -0.6893 REMARK 3 L13: 0.5822 L23: -0.4154 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.0935 S13: 0.1290 REMARK 3 S21: 0.1215 S22: 0.0039 S23: -0.0092 REMARK 3 S31: -0.0800 S32: -0.0327 S33: -0.0049 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7804 -6.8396 -20.8416 REMARK 3 T TENSOR REMARK 3 T11: 0.2153 T22: 0.1713 REMARK 3 T33: 0.1985 T12: 0.0221 REMARK 3 T13: -0.0039 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.5498 L22: 0.4411 REMARK 3 L33: 0.6375 L12: 0.0970 REMARK 3 L13: 0.0442 L23: 0.1923 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.0832 S13: 0.0271 REMARK 3 S21: 0.0507 S22: 0.0064 S23: 0.0360 REMARK 3 S31: 0.1036 S32: 0.0047 S33: -0.0324 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4080 -20.9355 -21.3374 REMARK 3 T TENSOR REMARK 3 T11: 0.2641 T22: 0.1362 REMARK 3 T33: 0.1918 T12: -0.0095 REMARK 3 T13: -0.0065 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.7235 L22: 0.9585 REMARK 3 L33: 1.0840 L12: 0.0354 REMARK 3 L13: -0.0241 L23: 0.0194 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: 0.1285 S13: -0.2080 REMARK 3 S21: 0.0109 S22: -0.0356 S23: 0.0372 REMARK 3 S31: 0.2536 S32: -0.0319 S33: -0.0378 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8324 -27.7417 -14.4919 REMARK 3 T TENSOR REMARK 3 T11: 0.3559 T22: 0.1594 REMARK 3 T33: 0.2997 T12: -0.0677 REMARK 3 T13: -0.0205 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 5.5366 L22: 2.1196 REMARK 3 L33: 2.2339 L12: -1.8121 REMARK 3 L13: 0.6531 L23: 0.0377 REMARK 3 S TENSOR REMARK 3 S11: 0.3102 S12: 0.0522 S13: -0.3160 REMARK 3 S21: -0.0770 S22: -0.2339 S23: -0.0038 REMARK 3 S31: 0.5492 S32: -0.3019 S33: -0.1418 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0483 -21.7033 -22.0372 REMARK 3 T TENSOR REMARK 3 T11: 0.2075 T22: 0.1438 REMARK 3 T33: 0.2071 T12: 0.0053 REMARK 3 T13: -0.0200 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 2.5940 L22: 4.3583 REMARK 3 L33: 2.1215 L12: 0.6741 REMARK 3 L13: -1.7542 L23: -0.0776 REMARK 3 S TENSOR REMARK 3 S11: 0.1163 S12: -0.2349 S13: 0.1342 REMARK 3 S21: -0.0459 S22: -0.0252 S23: -0.1034 REMARK 3 S31: 0.1966 S32: 0.0319 S33: 0.0738 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5028 3.8775 -51.5203 REMARK 3 T TENSOR REMARK 3 T11: 0.4365 T22: 0.4817 REMARK 3 T33: 0.3909 T12: 0.0618 REMARK 3 T13: 0.0152 T23: 0.0857 REMARK 3 L TENSOR REMARK 3 L11: 2.1733 L22: 2.0449 REMARK 3 L33: 9.4819 L12: -1.6643 REMARK 3 L13: -1.3223 L23: 1.5913 REMARK 3 S TENSOR REMARK 3 S11: 0.3929 S12: 0.9347 S13: 0.9465 REMARK 3 S21: -0.1388 S22: -0.3509 S23: -0.2156 REMARK 3 S31: -1.3576 S32: -1.0026 S33: 0.0104 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1027 -2.6043 -58.2074 REMARK 3 T TENSOR REMARK 3 T11: 0.5049 T22: 0.7791 REMARK 3 T33: 0.3521 T12: -0.0952 REMARK 3 T13: -0.0417 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 8.8918 L22: 3.2833 REMARK 3 L33: 2.2214 L12: 0.6293 REMARK 3 L13: 3.9240 L23: -0.9660 REMARK 3 S TENSOR REMARK 3 S11: 0.2465 S12: 0.8646 S13: 0.0374 REMARK 3 S21: -1.3406 S22: 0.6079 S23: 0.2623 REMARK 3 S31: 0.8163 S32: -1.1366 S33: -0.7023 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 22 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0290 -3.3042 -45.2918 REMARK 3 T TENSOR REMARK 3 T11: 0.2341 T22: 0.3071 REMARK 3 T33: 0.2616 T12: -0.0280 REMARK 3 T13: -0.0036 T23: 0.0675 REMARK 3 L TENSOR REMARK 3 L11: 5.6384 L22: 3.3639 REMARK 3 L33: 6.9833 L12: -0.3659 REMARK 3 L13: 2.0465 L23: -0.1101 REMARK 3 S TENSOR REMARK 3 S11: -0.2166 S12: 0.2409 S13: -0.0447 REMARK 3 S21: -0.0832 S22: 0.4944 S23: 0.1576 REMARK 3 S31: -0.2164 S32: -0.4393 S33: -0.2340 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.5289 -0.1695 -40.9942 REMARK 3 T TENSOR REMARK 3 T11: 0.4074 T22: 0.9231 REMARK 3 T33: 0.4795 T12: 0.0025 REMARK 3 T13: 0.0705 T23: 0.0711 REMARK 3 L TENSOR REMARK 3 L11: 4.3820 L22: 7.6038 REMARK 3 L33: 9.0086 L12: 2.1464 REMARK 3 L13: 0.9878 L23: 3.2694 REMARK 3 S TENSOR REMARK 3 S11: -0.1008 S12: -0.3893 S13: 0.1579 REMARK 3 S21: 0.4903 S22: -0.2094 S23: 1.1101 REMARK 3 S31: -0.3889 S32: -1.8464 S33: 0.2118 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OKG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000240880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20047 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 86.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.36800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.80 REMARK 200 R MERGE FOR SHELL (I) : 2.39900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2GFW WAS USED AS THE SEARCH MODEL FOR FABF, 2FAC REMARK 200 WAS USED AS THE SEARCH MODEL FOR ACPP REMARK 200 REMARK 200 REMARK: ORANGE RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 % PEG 8K, 0.1 M SODIUM CACODYLATE REMARK 280 PH 6.5, AND 0.3 M SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.86450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.44500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.29675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.44500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.43225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.44500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.44500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.29675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.44500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.44500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.43225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.86450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -56.86450 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 604 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 735 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 761 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 770 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 156 OG SER A 264 8554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 162 -125.24 59.49 REMARK 500 ASN A 214 79.35 -155.32 REMARK 500 ASP A 227 30.76 -146.65 REMARK 500 GLU A 274 -105.28 58.74 REMARK 500 LEU A 342 -114.76 54.55 REMARK 500 CYS A 375 57.26 -102.87 REMARK 500 ASP A 376 32.65 -98.84 REMARK 500 HIS A 382 -64.09 75.07 REMARK 500 THR B 2 143.75 80.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 301 O REMARK 620 2 ASN A 301 OD1 78.2 REMARK 620 3 ALA A 302 O 71.6 78.8 REMARK 620 4 GLU A 349 OE1 159.9 84.3 95.5 REMARK 620 5 ASN A 396 O 100.0 178.1 101.0 97.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MU4 A 502 DBREF 6OKG A 0 412 UNP P0AAI5 FABF_ECOLI 1 413 DBREF 6OKG B 0 77 UNP P0A6A8 ACP_ECOLI 1 78 SEQRES 1 A 413 MET SER LYS ARG ARG VAL VAL VAL THR GLY LEU GLY MET SEQRES 2 A 413 LEU SER PRO VAL GLY ASN THR VAL GLU SER THR TRP LYS SEQRES 3 A 413 ALA LEU LEU ALA GLY GLN SER GLY ILE SER LEU ILE ASP SEQRES 4 A 413 HIS PHE ASP THR SER ALA TYR ALA THR LYS PHE ALA GLY SEQRES 5 A 413 LEU VAL LYS ASP PHE ASN CYS GLU ASP ILE ILE SER ARG SEQRES 6 A 413 LYS GLU GLN ARG LYS MET ASP ALA PHE ILE GLN TYR GLY SEQRES 7 A 413 ILE VAL ALA GLY VAL GLN ALA MET GLN ASP SER GLY LEU SEQRES 8 A 413 GLU ILE THR GLU GLU ASN ALA THR ARG ILE GLY ALA ALA SEQRES 9 A 413 ILE GLY SER GLY ILE GLY GLY LEU GLY LEU ILE GLU GLU SEQRES 10 A 413 ASN HIS THR SER LEU MET ASN GLY GLY PRO ARG LYS ILE SEQRES 11 A 413 SER PRO PHE PHE VAL PRO SER THR ILE VAL ASN MET VAL SEQRES 12 A 413 ALA GLY HIS LEU THR ILE MET TYR GLY LEU ARG GLY PRO SEQRES 13 A 413 SER ILE SER ILE ALA THR ALA CYS THR SER GLY VAL HIS SEQRES 14 A 413 ASN ILE GLY HIS ALA ALA ARG ILE ILE ALA TYR GLY ASP SEQRES 15 A 413 ALA ASP VAL MET VAL ALA GLY GLY ALA GLU LYS ALA SER SEQRES 16 A 413 THR PRO LEU GLY VAL GLY GLY PHE GLY ALA ALA ARG ALA SEQRES 17 A 413 LEU SER THR ARG ASN ASP ASN PRO GLN ALA ALA SER ARG SEQRES 18 A 413 PRO TRP ASP LYS GLU ARG ASP GLY PHE VAL LEU GLY ASP SEQRES 19 A 413 GLY ALA GLY MET LEU VAL LEU GLU GLU TYR GLU HIS ALA SEQRES 20 A 413 LYS LYS ARG GLY ALA LYS ILE TYR ALA GLU LEU VAL GLY SEQRES 21 A 413 PHE GLY MET SER SER ASP ALA TYR HIS MET THR SER PRO SEQRES 22 A 413 PRO GLU ASN GLY ALA GLY ALA ALA LEU ALA MET ALA ASN SEQRES 23 A 413 ALA LEU ARG ASP ALA GLY ILE GLU ALA SER GLN ILE GLY SEQRES 24 A 413 TYR VAL ASN ALA HIS GLY THR SER THR PRO ALA GLY ASP SEQRES 25 A 413 LYS ALA GLU ALA GLN ALA VAL LYS THR ILE PHE GLY GLU SEQRES 26 A 413 ALA ALA SER ARG VAL LEU VAL SER SER THR LYS SER MET SEQRES 27 A 413 THR GLY HIS LEU LEU GLY ALA ALA GLY ALA VAL GLU SER SEQRES 28 A 413 ILE TYR SER ILE LEU ALA LEU ARG ASP GLN ALA VAL PRO SEQRES 29 A 413 PRO THR ILE ASN LEU ASP ASN PRO ASP GLU GLY CYS ASP SEQRES 30 A 413 LEU ASP PHE VAL PRO HIS GLU ALA ARG GLN VAL SER GLY SEQRES 31 A 413 MET GLU TYR THR LEU CYS ASN SER PHE GLY PHE GLY GLY SEQRES 32 A 413 THR ASN GLY SER LEU ILE PHE LYS LYS ILE SEQRES 1 B 78 MET SER THR ILE GLU GLU ARG VAL LYS LYS ILE ILE GLY SEQRES 2 B 78 GLU GLN LEU GLY VAL LYS GLN GLU GLU VAL THR ASN ASN SEQRES 3 B 78 ALA SER PHE VAL GLU ASP LEU GLY ALA ASP SER LEU ASP SEQRES 4 B 78 THR VAL GLU LEU VAL MET ALA LEU GLU GLU GLU PHE ASP SEQRES 5 B 78 THR GLU ILE PRO ASP GLU GLU ALA GLU LYS ILE THR THR SEQRES 6 B 78 VAL GLN ALA ALA ILE ASP TYR ILE ASN GLY HIS GLN ALA HET NA A 501 1 HET MU4 A 502 76 HETNAM NA SODIUM ION HETNAM MU4 N-[2-(HEXADECANOYLAMINO)ETHYL]-N~3~-[(2R)-2-HYDROXY-3, HETNAM 2 MU4 3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE FORMUL 3 NA NA 1+ FORMUL 4 MU4 C27 H54 N3 O8 P FORMUL 5 HOH *187(H2 O) HELIX 1 AA1 THR A 19 ALA A 29 1 11 HELIX 2 AA2 SER A 63 ARG A 68 1 6 HELIX 3 AA3 ASP A 71 GLY A 89 1 19 HELIX 4 AA4 ASN A 96 THR A 98 5 3 HELIX 5 AA5 GLY A 110 GLY A 125 1 16 HELIX 6 AA6 PRO A 126 ILE A 129 5 4 HELIX 7 AA7 ASN A 140 GLY A 151 1 12 HELIX 8 AA8 THR A 161 CYS A 163 5 3 HELIX 9 AA9 THR A 164 GLY A 180 1 17 HELIX 10 AB1 THR A 195 ALA A 205 1 11 HELIX 11 AB2 ASN A 214 ALA A 218 5 5 HELIX 12 AB3 TYR A 243 ARG A 249 1 7 HELIX 13 AB4 GLY A 276 GLY A 291 1 16 HELIX 14 AB5 GLU A 293 SER A 295 5 3 HELIX 15 AB6 THR A 307 GLY A 323 1 17 HELIX 16 AB7 GLU A 324 ARG A 328 5 5 HELIX 17 AB8 THR A 334 GLY A 339 1 6 HELIX 18 AB9 LEU A 341 GLY A 343 5 3 HELIX 19 AC1 ALA A 344 GLN A 360 1 17 HELIX 20 AC2 THR B 2 GLY B 16 1 15 HELIX 21 AC3 ASP B 35 ASP B 51 1 17 HELIX 22 AC4 PRO B 55 GLU B 60 1 6 HELIX 23 AC5 THR B 64 GLY B 74 1 11 SHEET 1 AA110 SER A 156 ILE A 157 0 SHEET 2 AA110 ILE A 100 GLY A 105 1 N ALA A 102 O ILE A 157 SHEET 3 AA110 VAL A 184 GLU A 191 1 O VAL A 186 N ALA A 103 SHEET 4 AA110 GLY A 234 GLU A 242 -1 O LEU A 240 N MET A 185 SHEET 5 AA110 VAL A 5 LEU A 13 -1 N VAL A 6 O GLU A 241 SHEET 6 AA110 ALA A 255 SER A 264 -1 O ALA A 255 N VAL A 7 SHEET 7 AA110 THR A 403 LYS A 411 -1 O LYS A 410 N GLU A 256 SHEET 8 AA110 TYR A 392 SER A 397 -1 N CYS A 395 O LEU A 407 SHEET 9 AA110 ILE A 297 ASN A 301 1 N ASN A 301 O LEU A 394 SHEET 10 AA110 LEU A 330 SER A 332 1 O LEU A 330 N VAL A 300 SHEET 1 AA2 2 ILE A 34 LEU A 36 0 SHEET 2 AA2 2 PHE A 49 GLY A 51 -1 O ALA A 50 N SER A 35 SHEET 1 AA3 2 ALA A 361 VAL A 362 0 SHEET 2 AA3 2 ARG A 385 GLN A 386 -1 O ARG A 385 N VAL A 362 LINK SG CYS A 163 C3 AMU4 A 502 1555 1555 1.85 LINK SG CYS A 163 C3 BMU4 A 502 1555 1555 1.85 LINK P24AMU4 A 502 OG SER B 36 1555 1555 1.60 LINK P24BMU4 A 502 OG SER B 36 1555 1555 1.60 LINK O ASN A 301 NA NA A 501 1555 1555 2.47 LINK OD1 ASN A 301 NA NA A 501 1555 1555 2.48 LINK O ALA A 302 NA NA A 501 1555 1555 2.78 LINK OE1 GLU A 349 NA NA A 501 1555 1555 2.45 LINK O ASN A 396 NA NA A 501 1555 1555 2.57 SITE 1 AC1 4 ASN A 301 ALA A 302 GLU A 349 ASN A 396 SITE 1 AC2 26 PRO A 135 ASN A 140 MET A 141 ALA A 143 SITE 2 AC2 26 GLY A 144 HIS A 145 SER A 156 ILE A 157 SITE 3 AC2 26 SER A 158 THR A 161 ALA A 162 CYS A 163 SITE 4 AC2 26 PHE A 202 ALA A 205 ARG A 206 ALA A 207 SITE 5 AC2 26 MET A 269 THR A 270 HIS A 303 THR A 305 SITE 6 AC2 26 HIS A 340 PHE A 398 GLY A 399 GLY A 402 SITE 7 AC2 26 THR A 403 SER B 36 CRYST1 86.890 86.890 113.729 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011509 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008793 0.00000