HEADER OXIDOREDUCTASE 25-APR-19 6OPL TITLE HUMAN BILIVERDIN IX BETA REDUCTASE Q14R MUTANT: NADP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN REDUCTASE (NADPH); COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FR, BILIVERDIN REDUCTASE B, BVR-B, BILIVERDIN-IX BETA- COMPND 5 REDUCTASE, GREEN HEME-BINDING PROTEIN, GHBP, NADPH-DEPENDENT COMPND 6 DIAPHORASE, NADPH-FLAVIN REDUCTASE, FLR; COMPND 7 EC: 1.5.1.30, 1.3.1.24; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BLVRB, FLR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN BILIVERDIN IX BETA REDUCTASE, SHORT-CHAIN KEYWDS 2 DEHYDROGENASE/REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.A.PAUKOVICH,E.Z.EISENMESSER REVDAT 2 11-OCT-23 6OPL 1 REMARK REVDAT 1 29-APR-20 6OPL 0 JRNL AUTH N.A.PAUKOVICH,E.Z.EISENMESSER JRNL TITL CONTROLLING BILIVERDIN REDUCTASE B COENZYME BINDING THROUGH JRNL TITL 2 EVOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3228: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 50913 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.690 REMARK 3 FREE R VALUE TEST SET COUNT : 2967 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7139 - 3.5858 1.00 5723 157 0.2128 0.2502 REMARK 3 2 3.5858 - 2.8465 1.00 5757 161 0.2086 0.2256 REMARK 3 3 2.8465 - 2.4867 1.00 5740 157 0.2133 0.2404 REMARK 3 4 2.4867 - 2.2594 1.00 5798 160 0.2000 0.2567 REMARK 3 5 2.2594 - 2.0975 1.00 5697 156 0.2026 0.2273 REMARK 3 6 2.0975 - 1.9738 1.00 5779 156 0.2041 0.2397 REMARK 3 7 1.9738 - 1.8750 1.00 5740 159 0.2183 0.2569 REMARK 3 8 1.8750 - 1.7933 1.00 5721 155 0.2239 0.2282 REMARK 3 9 1.7933 - 1.7243 1.00 5751 159 0.2334 0.2771 REMARK 3 10 1.7243 - 1.6648 1.00 5774 159 0.2464 0.2621 REMARK 3 11 1.6648 - 1.6127 1.00 5697 160 0.2608 0.2759 REMARK 3 12 1.6127 - 1.5666 1.00 5759 155 0.2772 0.3290 REMARK 3 13 1.5666 - 1.5254 1.00 5745 161 0.2880 0.2595 REMARK 3 14 1.5254 - 1.4882 1.00 5764 158 0.3054 0.3250 REMARK 3 15 1.4882 - 1.4543 1.00 5685 155 0.3263 0.2884 REMARK 3 16 1.4543 - 1.4234 0.99 5690 156 0.3557 0.4030 REMARK 3 17 1.4234 - 1.3949 0.95 5481 148 0.3968 0.4148 REMARK 3 18 1.3949 - 1.3686 0.78 4489 128 0.4276 0.4759 REMARK 3 19 1.3686 - 1.3442 0.56 3207 98 0.4869 0.5275 REMARK 3 20 1.3442 - 1.3214 0.31 1781 51 0.5110 0.5694 REMARK 3 21 1.3214 - 1.3001 0.06 358 18 0.6781 0.6483 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1632 REMARK 3 ANGLE : 1.525 2234 REMARK 3 CHIRALITY : 0.095 266 REMARK 3 PLANARITY : 0.008 280 REMARK 3 DIHEDRAL : 18.574 599 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000241042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55280 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 39.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 2.13300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HDO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOTHER LIQUOR: 0.1 M MES MONOHYDRATE, REMARK 280 12% W/V PEG20000, 1 M SODIUM CHLORIDE, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.08150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.07250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.92650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 21.08150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.07250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.92650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.08150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.07250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.92650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 21.08150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.07250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.92650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 825 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 830 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 170 O HOH A 602 1.47 REMARK 500 NH2 ARG A 78 O HOH A 601 1.87 REMARK 500 O HOH A 748 O HOH A 787 1.91 REMARK 500 NH1 ARG A 170 O HOH A 602 1.93 REMARK 500 O MET A 1 O HOH A 603 1.94 REMARK 500 O HOH A 601 O HOH A 765 1.94 REMARK 500 O HOH A 783 O HOH A 792 1.97 REMARK 500 O HOH A 757 O HOH A 759 2.00 REMARK 500 OE1 GLN A 25 O HOH A 604 2.00 REMARK 500 O HOH A 610 O HOH A 615 2.03 REMARK 500 O HOH A 614 O HOH A 734 2.03 REMARK 500 O HOH A 603 O HOH A 740 2.05 REMARK 500 O HOH A 647 O HOH A 746 2.08 REMARK 500 O MET A 1 O HOH A 605 2.12 REMARK 500 O HOH A 778 O HOH A 811 2.14 REMARK 500 NH2 ARG A 174 O HOH A 606 2.14 REMARK 500 OD1 ASP A 192 O HOH A 607 2.15 REMARK 500 NH2 ARG A 174 O HOH A 608 2.16 REMARK 500 O HOH A 751 O HOH A 818 2.17 REMARK 500 OD1 ASP A 104 O HOH A 609 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 829 O HOH A 834 3555 1.92 REMARK 500 O HOH A 847 O HOH A 847 2565 2.00 REMARK 500 O HOH A 775 O HOH A 827 2665 2.04 REMARK 500 O HOH A 840 O HOH A 840 3555 2.06 REMARK 500 O HOH A 602 O HOH A 734 8555 2.11 REMARK 500 O HOH A 798 O HOH A 817 2665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 187 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 5 -177.78 142.89 REMARK 500 ILE A 6 165.77 117.02 REMARK 500 GLU A 43 -71.38 -178.41 REMARK 500 ARG A 78 -131.39 63.08 REMARK 500 THR A 110 -106.90 -120.38 REMARK 500 PRO A 152 -150.58 -81.38 REMARK 500 ARG A 170 -85.40 -27.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 845 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 846 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 847 DISTANCE = 6.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 500 DBREF 6OPL A 1 205 UNP P30043 BLVRB_HUMAN 1 205 SEQADV 6OPL ARG A 14 UNP P30043 GLN 14 ENGINEERED MUTATION SEQRES 1 A 205 MET ALA VAL LYS LYS ILE ALA ILE PHE GLY ALA THR GLY SEQRES 2 A 205 ARG THR GLY LEU THR THR LEU ALA GLN ALA VAL GLN ALA SEQRES 3 A 205 GLY TYR GLU VAL THR VAL LEU VAL ARG ASP SER SER ARG SEQRES 4 A 205 LEU PRO SER GLU GLY PRO ARG PRO ALA HIS VAL VAL VAL SEQRES 5 A 205 GLY ASP VAL LEU GLN ALA ALA ASP VAL ASP LYS THR VAL SEQRES 6 A 205 ALA GLY GLN ASP ALA VAL ILE VAL LEU LEU GLY THR ARG SEQRES 7 A 205 ASN ASP LEU SER PRO THR THR VAL MET SER GLU GLY ALA SEQRES 8 A 205 ARG ASN ILE VAL ALA ALA MET LYS ALA HIS GLY VAL ASP SEQRES 9 A 205 LYS VAL VAL ALA CYS THR SER ALA PHE LEU LEU TRP ASP SEQRES 10 A 205 PRO THR LYS VAL PRO PRO ARG LEU GLN ALA VAL THR ASP SEQRES 11 A 205 ASP HIS ILE ARG MET HIS LYS VAL LEU ARG GLU SER GLY SEQRES 12 A 205 LEU LYS TYR VAL ALA VAL MET PRO PRO HIS ILE GLY ASP SEQRES 13 A 205 GLN PRO LEU THR GLY ALA TYR THR VAL THR LEU ASP GLY SEQRES 14 A 205 ARG GLY PRO SER ARG VAL ILE SER LYS HIS ASP LEU GLY SEQRES 15 A 205 HIS PHE MET LEU ARG CYS LEU THR THR ASP GLU TYR ASP SEQRES 16 A 205 GLY HIS SER THR TYR PRO SER HIS GLN TYR HET NAP A 500 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HOH *247(H2 O) HELIX 1 AA1 GLY A 13 GLY A 27 1 15 HELIX 2 AA2 ASP A 36 LEU A 40 5 5 HELIX 3 AA3 GLN A 57 ALA A 66 1 10 HELIX 4 AA4 THR A 85 GLY A 102 1 18 HELIX 5 AA5 SER A 111 TRP A 116 5 6 HELIX 6 AA6 ASP A 117 VAL A 121 5 5 HELIX 7 AA7 PRO A 122 ARG A 124 5 3 HELIX 8 AA8 LEU A 125 SER A 142 1 18 HELIX 9 AA9 LYS A 178 CYS A 188 1 11 HELIX 10 AB1 LEU A 189 THR A 191 5 3 SHEET 1 AA1 8 HIS A 49 VAL A 52 0 SHEET 2 AA1 8 THR A 31 VAL A 34 1 N VAL A 34 O VAL A 51 SHEET 3 AA1 8 ALA A 7 PHE A 9 1 N ILE A 8 O THR A 31 SHEET 4 AA1 8 ALA A 70 VAL A 73 1 O ILE A 72 N PHE A 9 SHEET 5 AA1 8 LYS A 105 CYS A 109 1 O VAL A 107 N VAL A 71 SHEET 6 AA1 8 LYS A 145 VAL A 149 1 O LYS A 145 N VAL A 106 SHEET 7 AA1 8 SER A 198 SER A 202 1 O THR A 199 N ALA A 148 SHEET 8 AA1 8 THR A 164 LEU A 167 -1 N THR A 164 O SER A 202 SHEET 1 AA2 2 HIS A 153 GLY A 155 0 SHEET 2 AA2 2 VAL A 175 SER A 177 1 O ILE A 176 N HIS A 153 CISPEP 1 ASP A 168 GLY A 169 0 -7.08 SITE 1 AC1 36 GLY A 10 THR A 12 GLY A 13 ARG A 14 SITE 2 AC1 36 THR A 15 ARG A 35 ARG A 39 ASP A 54 SITE 3 AC1 36 VAL A 55 LEU A 74 LEU A 75 GLY A 76 SITE 4 AC1 36 THR A 77 ARG A 78 VAL A 86 MET A 87 SITE 5 AC1 36 CYS A 109 THR A 110 SER A 111 HIS A 132 SITE 6 AC1 36 PRO A 151 PRO A 152 HIS A 153 ILE A 154 SITE 7 AC1 36 HOH A 601 HOH A 639 HOH A 651 HOH A 663 SITE 8 AC1 36 HOH A 679 HOH A 692 HOH A 708 HOH A 715 SITE 9 AC1 36 HOH A 722 HOH A 730 HOH A 736 HOH A 741 CRYST1 42.163 98.145 125.853 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010189 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007946 0.00000