HEADER    TOXIN                                   25-APR-19   6OQ7              
TITLE     STRUCTURE OF THE GTD DOMAIN OF CLOSTRIDIUM DIFFICILE TOXIN B IN       
TITLE    2 COMPLEX WITH VHH E3                                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TOXIN B;                                                   
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: E3;                                                        
COMPND   7 CHAIN: C;                                                            
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE;                       
SOURCE   3 ORGANISM_TAXID: 1496;                                                
SOURCE   4 GENE: TCDB;                                                          
SOURCE   5 EXPRESSION_SYSTEM: BACILLUS MEGATERIUM;                              
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 1404;                                       
SOURCE   7 MOL_ID: 2;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: CAMELIDAE;                                      
SOURCE   9 ORGANISM_TAXID: 9835;                                                
SOURCE  10 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  11 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    TOXIN VHH, TOXIN                                                      
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    P.CHEN,K.LAM,R.JIN                                                    
REVDAT   7   23-OCT-24 6OQ7    1       REMARK                                   
REVDAT   6   11-OCT-23 6OQ7    1       HETSYN                                   
REVDAT   5   29-JUL-20 6OQ7    1       COMPND REMARK HETNAM LINK                
REVDAT   5 2                   1       SITE                                     
REVDAT   4   04-DEC-19 6OQ7    1       REMARK                                   
REVDAT   3   21-AUG-19 6OQ7    1       JRNL                                     
REVDAT   2   31-JUL-19 6OQ7    1       JRNL                                     
REVDAT   1   10-JUL-19 6OQ7    0                                                
JRNL        AUTH   P.CHEN,K.H.LAM,Z.LIU,F.A.MINDLIN,B.CHEN,C.B.GUTIERREZ,       
JRNL        AUTH 2 L.HUANG,Y.ZHANG,T.HAMZA,H.FENG,T.MATSUI,M.E.BOWEN,K.PERRY,   
JRNL        AUTH 3 R.JIN                                                        
JRNL        TITL   STRUCTURE OF THE FULL-LENGTH CLOSTRIDIUM DIFFICILE TOXIN B.  
JRNL        REF    NAT.STRUCT.MOL.BIOL.          V.  26   712 2019              
JRNL        REFN                   ESSN 1545-9985                               
JRNL        PMID   31308519                                                     
JRNL        DOI    10.1038/S41594-019-0268-0                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.39 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0232                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 43.14                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 30060                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.199                           
REMARK   3   R VALUE            (WORKING SET) : 0.197                           
REMARK   3   FREE R VALUE                     : 0.236                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1562                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.39                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.45                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2006                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 91.25                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2650                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 112                          
REMARK   3   BIN FREE R VALUE                    : 0.2860                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 5229                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 39                                      
REMARK   3   SOLVENT ATOMS            : 100                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 50.32                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 3.34000                                              
REMARK   3    B22 (A**2) : 1.44000                                              
REMARK   3    B33 (A**2) : -4.78000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.379         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.243         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.193         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.595         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.955                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.942                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  5363 ; 0.003 ; 0.012       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  7252 ; 0.998 ; 1.642       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   648 ; 6.159 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   288 ;37.595 ;24.792       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   976 ;17.719 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    19 ;18.394 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   714 ; 0.081 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  4046 ; 0.004 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  2598 ; 2.163 ; 4.916       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  3244 ; 3.433 ; 7.367       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  2765 ; 2.915 ; 5.083       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  8011 ; 6.357 ;65.316       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6OQ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-19.                  
REMARK 100 THE DEPOSITION ID IS D_1000241126.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 03-FEB-16                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRL                               
REMARK 200  BEAMLINE                       : BL9-2                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97946                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 31676                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.390                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 43.140                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 7.100                              
REMARK 200  R MERGE                    (I) : 0.14000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 14.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.45                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.50000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 6OQ5                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.77                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM ACETATE AND 20% PEG      
REMARK 280  3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K               
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       33.00900            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       56.91250            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       52.04800            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       56.91250            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       33.00900            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       52.04800            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ALA A   543                                                      
REMARK 465     HIS A   544                                                      
REMARK 465     HIS A   545                                                      
REMARK 465     HIS A   546                                                      
REMARK 465     HIS A   547                                                      
REMARK 465     HIS A   548                                                      
REMARK 465     HIS A   549                                                      
REMARK 465     SER C    -2                                                      
REMARK 465     ASN C    -1                                                      
REMARK 465     SER C     0                                                      
REMARK 465     GLN C     1                                                      
REMARK 465     VAL C     2                                                      
REMARK 465     GLU C   112                                                      
REMARK 465     PRO C   113                                                      
REMARK 465     LYS C   114                                                      
REMARK 465     THR C   115                                                      
REMARK 465     PRO C   116                                                      
REMARK 465     LYS C   117                                                      
REMARK 465     PRO C   118                                                      
REMARK 465     GLN C   119                                                      
REMARK 465     THR C   120                                                      
REMARK 465     SER C   121                                                      
REMARK 465     GLY C   122                                                      
REMARK 465     ALA C   123                                                      
REMARK 465     PRO C   124                                                      
REMARK 465     VAL C   125                                                      
REMARK 465     PRO C   126                                                      
REMARK 465     TYR C   127                                                      
REMARK 465     PRO C   128                                                      
REMARK 465     ASP C   129                                                      
REMARK 465     PRO C   130                                                      
REMARK 465     LEU C   131                                                      
REMARK 465     GLU C   132                                                      
REMARK 465     PRO C   133                                                      
REMARK 465     ARG C   134                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A  17       -9.06     82.26                                   
REMARK 500    ASN A 235       54.67   -141.18                                   
REMARK 500    SER A 306        0.29    -67.45                                   
REMARK 500    SER A 470        2.85   -150.76                                   
REMARK 500    ALA A 512       57.64    -92.96                                   
REMARK 500    GLU A 541       46.13     75.59                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 603  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 288   OD2                                                    
REMARK 620 2 GLU A 516   OE2  81.5                                              
REMARK 620 3 UDP A 601   O2A  78.4 158.7                                        
REMARK 620 4 UDP A 601   O3B 166.9 109.2  89.9                                  
REMARK 620 5 HOH A 706   O    93.4  90.5  97.6  94.0                            
REMARK 620 6 HOH A 728   O    75.0  85.0  83.0  97.9 168.1                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 604  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 288   OD2                                                    
REMARK 620 2 GLN A 515   O    78.6                                              
REMARK 620 3 ASN A 518   O   143.6  76.1                                        
REMARK 620 4 UDP A 601   O1A 106.9 153.5  85.8                                  
REMARK 620 5 UDP A 601   O2A  56.2 131.9 131.5  51.4                            
REMARK 620 6 HOH A 728   O    59.2  84.1  92.2  77.3  60.2                      
REMARK 620 7 HOH A 783   O    89.8 104.2 121.6 101.8  92.3 146.1                
REMARK 620 N                    1     2     3     4     5     6                 
DBREF  6OQ7 A    1   543  UNP    M4NKV9   M4NKV9_CLODI     1    543             
DBREF  6OQ7 C   -2   134  PDB    6OQ7     6OQ7            -2    134             
SEQADV 6OQ7 HIS A  544  UNP  M4NKV9              EXPRESSION TAG                 
SEQADV 6OQ7 HIS A  545  UNP  M4NKV9              EXPRESSION TAG                 
SEQADV 6OQ7 HIS A  546  UNP  M4NKV9              EXPRESSION TAG                 
SEQADV 6OQ7 HIS A  547  UNP  M4NKV9              EXPRESSION TAG                 
SEQADV 6OQ7 HIS A  548  UNP  M4NKV9              EXPRESSION TAG                 
SEQADV 6OQ7 HIS A  549  UNP  M4NKV9              EXPRESSION TAG                 
SEQRES   1 A  549  MET SER LEU VAL ASN ARG LYS GLN LEU GLU LYS MET ALA          
SEQRES   2 A  549  ASN VAL ARG PHE ARG VAL GLN GLU ASP GLU TYR VAL ALA          
SEQRES   3 A  549  ILE LEU ASP ALA LEU GLU GLU TYR HIS ASN MET SER GLU          
SEQRES   4 A  549  ASN THR VAL VAL GLU LYS TYR LEU LYS LEU LYS ASP ILE          
SEQRES   5 A  549  ASN SER LEU THR ASP THR TYR ILE ASP THR TYR LYS LYS          
SEQRES   6 A  549  SER GLY ARG ASN LYS ALA LEU LYS LYS PHE LYS GLU TYR          
SEQRES   7 A  549  LEU VAL ILE GLU ILE LEU GLU LEU LYS ASN SER ASN LEU          
SEQRES   8 A  549  THR PRO VAL GLU LYS ASN LEU HIS PHE ILE TRP ILE GLY          
SEQRES   9 A  549  GLY GLN ILE ASN ASP THR ALA ILE ASN TYR ILE ASN GLN          
SEQRES  10 A  549  TRP LYS ASP VAL ASN SER ASP TYR ASN VAL ASN VAL PHE          
SEQRES  11 A  549  TYR ASP SER ASN ALA PHE LEU ILE ASN THR LEU LYS LYS          
SEQRES  12 A  549  THR ILE ILE GLU SER ALA SER ASN ASP THR LEU GLU SER          
SEQRES  13 A  549  PHE ARG GLU ASN LEU ASN ASP PRO GLU PHE ASN HIS THR          
SEQRES  14 A  549  ALA PHE PHE ARG LYS ARG MET GLN ILE ILE TYR ASP LYS          
SEQRES  15 A  549  GLN GLN ASN PHE ILE ASN TYR TYR LYS ALA GLN LYS GLU          
SEQRES  16 A  549  GLU ASN PRO ASP LEU ILE ILE ASP ASP ILE VAL LYS THR          
SEQRES  17 A  549  TYR LEU SER ASN GLU TYR SER LYS ASP ILE ASP GLU LEU          
SEQRES  18 A  549  ASN ALA TYR ILE GLU GLU SER LEU ASN LYS VAL THR GLU          
SEQRES  19 A  549  ASN SER GLY ASN ASP VAL ARG ASN PHE GLU GLU PHE LYS          
SEQRES  20 A  549  THR GLY GLU VAL PHE ASN LEU TYR GLU GLN GLU LEU VAL          
SEQRES  21 A  549  GLU ARG TRP ASN LEU ALA GLY ALA SER ASP ILE LEU ARG          
SEQRES  22 A  549  VAL ALA ILE LEU LYS ASN ILE GLY GLY VAL TYR LEU ASP          
SEQRES  23 A  549  VAL ASP MET LEU PRO GLY ILE HIS PRO ASP LEU PHE LYS          
SEQRES  24 A  549  ASP ILE ASN LYS PRO ASP SER VAL LYS THR ALA VAL ASP          
SEQRES  25 A  549  TRP GLU GLU MET GLN LEU GLU ALA ILE MET LYS HIS LYS          
SEQRES  26 A  549  GLU TYR ILE PRO GLU TYR THR SER LYS HIS PHE ASP THR          
SEQRES  27 A  549  LEU ASP GLU GLU VAL GLN SER SER PHE GLU SER VAL LEU          
SEQRES  28 A  549  ALA SER LYS SER ASP LYS SER GLU ILE PHE LEU PRO LEU          
SEQRES  29 A  549  GLY ASP ILE GLU VAL SER PRO LEU GLU VAL LYS ILE ALA          
SEQRES  30 A  549  PHE ALA LYS GLY SER ILE ILE ASN GLN ALA LEU ILE SER          
SEQRES  31 A  549  ALA LYS ASP SER TYR CYS SER ASP LEU LEU ILE LYS GLN          
SEQRES  32 A  549  ILE GLN ASN ARG TYR LYS ILE LEU ASN ASP THR LEU GLY          
SEQRES  33 A  549  PRO ILE ILE SER GLN GLY ASN ASP PHE ASN THR THR MET          
SEQRES  34 A  549  ASN ASN PHE GLY GLU SER LEU GLY ALA ILE ALA ASN GLU          
SEQRES  35 A  549  GLU ASN ILE SER PHE ILE ALA LYS ILE GLY SER TYR LEU          
SEQRES  36 A  549  ARG VAL GLY PHE TYR PRO GLU ALA ASN THR THR ILE THR          
SEQRES  37 A  549  LEU SER GLY PRO THR ILE TYR ALA GLY ALA TYR LYS ASP          
SEQRES  38 A  549  LEU LEU THR PHE LYS GLU MET SER ILE ASP THR SER ILE          
SEQRES  39 A  549  LEU SER SER GLU LEU ARG ASN PHE GLU PHE PRO LYS VAL          
SEQRES  40 A  549  ASN ILE SER GLN ALA THR GLU GLN GLU LYS ASN SER LEU          
SEQRES  41 A  549  TRP GLN PHE ASN GLU GLU ARG ALA LYS ILE GLN PHE GLU          
SEQRES  42 A  549  GLU TYR LYS LYS ASN TYR PHE GLU GLY ALA HIS HIS HIS          
SEQRES  43 A  549  HIS HIS HIS                                                  
SEQRES   1 C  137  SER ASN SER GLN VAL GLN LEU VAL GLU SER GLY GLY GLY          
SEQRES   2 C  137  LEU VAL GLN THR GLY GLY SER LEU ARG LEU SER CYS ALA          
SEQRES   3 C  137  SER SER GLY SER ILE ALA GLY PHE GLU THR VAL THR TRP          
SEQRES   4 C  137  SER ARG GLN ALA PRO GLY LYS SER LEU GLN TRP VAL ALA          
SEQRES   5 C  137  SER MET THR LYS THR ASN ASN GLU ILE TYR SER ASP SER          
SEQRES   6 C  137  VAL LYS GLY ARG PHE ILE ILE SER ARG ASP ASN ALA LYS          
SEQRES   7 C  137  ASN THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU          
SEQRES   8 C  137  ASP THR GLY VAL TYR PHE CYS LYS GLY PRO GLU LEU ARG          
SEQRES   9 C  137  GLY GLN GLY ILE GLN VAL THR VAL SER SER GLU PRO LYS          
SEQRES  10 C  137  THR PRO LYS PRO GLN THR SER GLY ALA PRO VAL PRO TYR          
SEQRES  11 C  137  PRO ASP PRO LEU GLU PRO ARG                                  
HET    UDP  A 601      25                                                       
HET    GLC  A 602      12                                                       
HET     MN  A 603       1                                                       
HET     MG  A 604       1                                                       
HETNAM     UDP URIDINE-5'-DIPHOSPHATE                                           
HETNAM     GLC ALPHA-D-GLUCOPYRANOSE                                            
HETNAM      MN MANGANESE (II) ION                                               
HETNAM      MG MAGNESIUM ION                                                    
HETSYN     GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE                              
FORMUL   3  UDP    C9 H14 N2 O12 P2                                             
FORMUL   4  GLC    C6 H12 O6                                                    
FORMUL   5   MN    MN 2+                                                        
FORMUL   6   MG    MG 2+                                                        
FORMUL   7  HOH   *100(H2 O)                                                    
HELIX    1 AA1 ASN A    5  ALA A   13  1                                   9    
HELIX    2 AA2 GLU A   21  ASN A   36  1                                  16    
HELIX    3 AA3 THR A   41  TYR A   63  1                                  23    
HELIX    4 AA4 ARG A   68  ASN A   90  1                                  23    
HELIX    5 AA5 ASN A  108  ASN A  122  1                                  15    
HELIX    6 AA6 LEU A  137  PHE A  157  1                                  21    
HELIX    7 AA7 ARG A  158  LEU A  161  5                                   4    
HELIX    8 AA8 ASN A  167  ASN A  197  1                                  31    
HELIX    9 AA9 ILE A  201  SER A  215  1                                  15    
HELIX   10 AB1 ASP A  217  GLU A  234  1                                  18    
HELIX   11 AB2 PHE A  243  THR A  248  1                                   6    
HELIX   12 AB3 VAL A  251  GLU A  261  1                                  11    
HELIX   13 AB4 ASN A  264  ILE A  280  1                                  17    
HELIX   14 AB5 THR A  309  GLU A  326  1                                  18    
HELIX   15 AB6 SER A  333  THR A  338  1                                   6    
HELIX   16 AB7 ASP A  340  LYS A  354  1                                  15    
HELIX   17 AB8 ASP A  356  PHE A  361  1                                   6    
HELIX   18 AB9 SER A  394  SER A  420  1                                  27    
HELIX   19 AC1 ASP A  424  ILE A  439  1                                  16    
HELIX   20 AC2 ASN A  444  ALA A  449  1                                   6    
HELIX   21 AC3 SER A  453  VAL A  457  5                                   5    
HELIX   22 AC4 THR A  465  SER A  470  1                                   6    
HELIX   23 AC5 GLY A  471  PHE A  485  1                                  15    
HELIX   24 AC6 LEU A  495  ARG A  500  1                                   6    
HELIX   25 AC7 ASN A  501  GLU A  503  5                                   3    
HELIX   26 AC8 PRO A  505  VAL A  507  5                                   3    
HELIX   27 AC9 GLU A  514  ASN A  518  5                                   5    
HELIX   28 AD1 ASN A  524  GLU A  541  1                                  18    
HELIX   29 AD2 LYS C   86  THR C   90  5                                   5    
SHEET    1 AA1 2 THR A  92  PRO A  93  0                                        
SHEET    2 AA1 2 GLU A 368  VAL A 369 -1  O  VAL A 369   N  THR A  92           
SHEET    1 AA2 6 GLY A 237  ASP A 239  0                                        
SHEET    2 AA2 6 ASN A 126  TYR A 131  1  N  VAL A 129   O  ASN A 238           
SHEET    3 AA2 6 ASN A  97  ILE A 101  1  N  PHE A 100   O  PHE A 130           
SHEET    4 AA2 6 GLY A 282  LEU A 285  1  O  VAL A 283   N  HIS A  99           
SHEET    5 AA2 6 SER A 382  SER A 390 -1  O  SER A 390   N  GLY A 282           
SHEET    6 AA2 6 LYS A 375  ALA A 379 -1  N  ALA A 379   O  SER A 382           
SHEET    1 AA3 2 LEU A 290  PRO A 291  0                                        
SHEET    2 AA3 2 ILE A 509  SER A 510 -1  O  SER A 510   N  LEU A 290           
SHEET    1 AA4 4 LEU C   4  SER C   7  0                                        
SHEET    2 AA4 4 LEU C  18  SER C  24 -1  O  SER C  21   N  SER C   7           
SHEET    3 AA4 4 THR C  77  MET C  82 -1  O  MET C  82   N  LEU C  18           
SHEET    4 AA4 4 PHE C  67  ARG C  71 -1  N  SER C  70   O  TYR C  79           
SHEET    1 AA5 6 GLY C  10  VAL C  12  0                                        
SHEET    2 AA5 6 ILE C 105  VAL C 109  1  O  THR C 108   N  VAL C  12           
SHEET    3 AA5 6 GLY C  91  LYS C  96 -1  N  TYR C  93   O  ILE C 105           
SHEET    4 AA5 6 VAL C  34  GLN C  39 -1  N  SER C  37   O  PHE C  94           
SHEET    5 AA5 6 GLN C  46  MET C  51 -1  O  GLN C  46   N  ARG C  38           
SHEET    6 AA5 6 GLU C  57  TYR C  59 -1  O  ILE C  58   N  SER C  50           
SSBOND   1 CYS C   22    CYS C   95                          1555   1555  2.07  
LINK         OD2 ASP A 288                MN    MN A 603     1555   1555  2.22  
LINK         OD2 ASP A 288                MG    MG A 604     1555   1555  2.79  
LINK         O   GLN A 515                MG    MG A 604     1555   1555  2.86  
LINK         OE2 GLU A 516                MN    MN A 603     1555   1555  2.11  
LINK         O   ASN A 518                MG    MG A 604     1555   1555  2.69  
LINK         O2A UDP A 601                MN    MN A 603     1555   1555  2.10  
LINK         O3B UDP A 601                MN    MN A 603     1555   1555  1.94  
LINK         O1A UDP A 601                MG    MG A 604     1555   1555  2.97  
LINK         O2A UDP A 601                MG    MG A 604     1555   1555  2.99  
LINK        MN    MN A 603                 O   HOH A 706     1555   1555  2.16  
LINK        MN    MN A 603                 O   HOH A 728     1555   1555  2.18  
LINK        MG    MG A 604                 O   HOH A 728     1555   1555  2.62  
LINK        MG    MG A 604                 O   HOH A 783     1555   1555  2.52  
CRYST1   66.018  104.096  113.825  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.015147  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.009607  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008785        0.00000