HEADER MEMBRANE PROTEIN 29-APR-19 6OR2 TITLE MMPL3 IS A LIPID TRANSPORTER THAT BINDS TREHALOSE MONOMYCOLATE AND TITLE 2 PHOSPHATIDYLETHANOLAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE PROTEIN, MMPL FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MMPL3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 VARIANT: ATCC 700084 / MC(2)155; SOURCE 7 GENE: MSMEG_0250; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSPORTER, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.-C.SU REVDAT 5 13-MAR-24 6OR2 1 REMARK REVDAT 4 01-JAN-20 6OR2 1 REMARK REVDAT 3 12-JUN-19 6OR2 1 JRNL REVDAT 2 05-JUN-19 6OR2 1 JRNL REVDAT 1 29-MAY-19 6OR2 0 SPRSDE 29-MAY-19 6OR2 6N3T JRNL AUTH C.C.SU,P.A.KLENOTIC,J.R.BOLLA,G.E.PURDY,C.V.ROBINSON,E.W.YU JRNL TITL MMPL3 IS A LIPID TRANSPORTER THAT BINDS TREHALOSE JRNL TITL 2 MONOMYCOLATE AND PHOSPHATIDYLETHANOLAMINE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 11241 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31113875 JRNL DOI 10.1073/PNAS.1901346116 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3318: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 90546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.870 REMARK 3 FREE R VALUE TEST SET COUNT : 3506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 99.3249 - 7.5722 0.92 3441 136 0.2373 0.2945 REMARK 3 2 7.5722 - 6.0105 0.92 3438 135 0.2481 0.2767 REMARK 3 3 6.0105 - 5.2508 0.95 3551 141 0.2379 0.2767 REMARK 3 4 5.2508 - 4.7707 0.93 3492 144 0.1905 0.2283 REMARK 3 5 4.7707 - 4.4288 0.94 3524 140 0.1876 0.2419 REMARK 3 6 4.4288 - 4.1676 0.96 3576 146 0.2001 0.2358 REMARK 3 7 4.1676 - 3.9589 0.96 3635 147 0.2134 0.2464 REMARK 3 8 3.9589 - 3.7866 0.96 3583 147 0.2153 0.2479 REMARK 3 9 3.7866 - 3.6408 0.92 3435 135 0.2289 0.2377 REMARK 3 10 3.6408 - 3.5152 0.95 3569 147 0.2511 0.3502 REMARK 3 11 3.5152 - 3.4052 0.96 3630 149 0.2681 0.3169 REMARK 3 12 3.4052 - 3.3079 0.96 3606 146 0.2740 0.3029 REMARK 3 13 3.3079 - 3.2208 0.97 3607 150 0.2981 0.3579 REMARK 3 14 3.2208 - 3.1422 0.97 3643 148 0.3139 0.3703 REMARK 3 15 3.1422 - 3.0708 0.96 3610 145 0.3227 0.3382 REMARK 3 16 3.0708 - 3.0054 0.93 3442 142 0.3369 0.3579 REMARK 3 17 3.0054 - 2.9453 0.94 3590 148 0.3554 0.3727 REMARK 3 18 2.9453 - 2.8897 0.96 3564 148 0.3560 0.3793 REMARK 3 19 2.8897 - 2.8381 0.95 3602 141 0.3656 0.3644 REMARK 3 20 2.8381 - 2.7900 0.95 3551 145 0.3831 0.4059 REMARK 3 21 2.7900 - 2.7450 0.94 3548 137 0.3821 0.3437 REMARK 3 22 2.7450 - 2.7028 0.89 3359 132 0.4019 0.4111 REMARK 3 23 2.7028 - 2.6630 0.88 3282 131 0.4302 0.4660 REMARK 3 24 2.6630 - 2.6255 0.79 2953 111 0.4515 0.4064 REMARK 3 25 2.6255 - 2.5900 0.76 2809 115 0.4452 0.4669 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.510 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5785 REMARK 3 ANGLE : 0.523 7857 REMARK 3 CHIRALITY : 0.038 938 REMARK 3 PLANARITY : 0.004 982 REMARK 3 DIHEDRAL : 14.564 3464 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 134.2214 73.6620 55.2477 REMARK 3 T TENSOR REMARK 3 T11: 0.9781 T22: 0.7198 REMARK 3 T33: 0.6637 T12: 0.0105 REMARK 3 T13: 0.0217 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 1.2754 L22: 2.9095 REMARK 3 L33: 4.5330 L12: -1.0402 REMARK 3 L13: -0.6572 L23: 1.8000 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: -0.0008 S13: 0.0573 REMARK 3 S21: -0.4234 S22: -0.2859 S23: 0.1893 REMARK 3 S31: -0.3718 S32: -0.5750 S33: 0.3061 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 139.1129 53.4394 32.0505 REMARK 3 T TENSOR REMARK 3 T11: 0.8491 T22: 0.4125 REMARK 3 T33: 0.6567 T12: -0.0487 REMARK 3 T13: 0.0523 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 2.2657 L22: 1.8868 REMARK 3 L33: 4.3782 L12: 0.5733 REMARK 3 L13: 0.1042 L23: 0.7467 REMARK 3 S TENSOR REMARK 3 S11: 0.0084 S12: 0.0327 S13: 0.0251 REMARK 3 S21: 0.3934 S22: -0.0216 S23: 0.1568 REMARK 3 S31: 0.8100 S32: -0.0046 S33: 0.1999 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 131.5956 55.2519 12.2247 REMARK 3 T TENSOR REMARK 3 T11: 1.6891 T22: 1.1760 REMARK 3 T33: 0.8933 T12: -0.1845 REMARK 3 T13: -0.1775 T23: -0.2584 REMARK 3 L TENSOR REMARK 3 L11: 6.8540 L22: 3.1583 REMARK 3 L33: 2.9180 L12: 2.4974 REMARK 3 L13: -2.6546 L23: -1.2959 REMARK 3 S TENSOR REMARK 3 S11: -0.5766 S12: 1.8924 S13: -0.1998 REMARK 3 S21: -1.6781 S22: 0.9354 S23: 0.6317 REMARK 3 S31: 0.3402 S32: -1.4829 S33: -0.1412 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): 154.4924 84.8673 51.7131 REMARK 3 T TENSOR REMARK 3 T11: 0.9724 T22: 0.6200 REMARK 3 T33: 0.7601 T12: -0.1284 REMARK 3 T13: 0.0718 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.1746 L22: 1.5199 REMARK 3 L33: 5.1589 L12: -0.3479 REMARK 3 L13: -0.6254 L23: 0.5297 REMARK 3 S TENSOR REMARK 3 S11: 0.3472 S12: -0.3787 S13: 0.3631 REMARK 3 S21: 0.0032 S22: -0.0201 S23: -0.5003 REMARK 3 S31: -1.4807 S32: 0.4836 S33: -0.3053 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 502 THROUGH 582 ) REMARK 3 ORIGIN FOR THE GROUP (A): 160.4725 74.1595 51.3051 REMARK 3 T TENSOR REMARK 3 T11: 0.5848 T22: 0.9054 REMARK 3 T33: 0.6017 T12: -0.0005 REMARK 3 T13: -0.0031 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 1.3909 L22: 4.2357 REMARK 3 L33: 6.1524 L12: 1.1242 REMARK 3 L13: 0.5217 L23: 3.1991 REMARK 3 S TENSOR REMARK 3 S11: -0.1752 S12: -0.3987 S13: 0.0361 REMARK 3 S21: -0.2073 S22: 0.4625 S23: -0.7000 REMARK 3 S31: -1.0550 S32: 1.4035 S33: -0.3056 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 583 THROUGH 757 ) REMARK 3 ORIGIN FOR THE GROUP (A): 147.2222 63.2642 21.3636 REMARK 3 T TENSOR REMARK 3 T11: 0.6625 T22: 0.5186 REMARK 3 T33: 0.5330 T12: -0.0576 REMARK 3 T13: -0.1179 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.1226 L22: 1.9884 REMARK 3 L33: 7.8949 L12: -0.7247 REMARK 3 L13: -1.6245 L23: 1.5515 REMARK 3 S TENSOR REMARK 3 S11: 0.0192 S12: 0.2289 S13: 0.0129 REMARK 3 S21: -0.3943 S22: -0.1152 S23: -0.0086 REMARK 3 S31: -0.7906 S32: -0.0451 S33: 0.0787 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 758 THROUGH 761 ) REMARK 3 ORIGIN FOR THE GROUP (A): 136.5644 34.8616 8.3098 REMARK 3 T TENSOR REMARK 3 T11: 2.6235 T22: 1.5734 REMARK 3 T33: 1.6751 T12: 0.8053 REMARK 3 T13: 0.3055 T23: -0.4339 REMARK 3 L TENSOR REMARK 3 L11: 0.0306 L22: 0.1587 REMARK 3 L33: 0.2801 L12: -0.0697 REMARK 3 L13: 0.0926 L23: -0.2108 REMARK 3 S TENSOR REMARK 3 S11: 0.1581 S12: 1.0372 S13: -1.1767 REMARK 3 S21: 0.1803 S22: -0.1987 S23: -0.6933 REMARK 3 S31: 0.9437 S32: 0.7011 S33: -0.0021 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OR2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000241209. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51822 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 2.23700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.05M MG(AC)2, 0.1M REMARK 280 NAAC(5.0), AND 3% GLYCEROL, PH 7.5, VAPOR DIFFUSION, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.40700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.29550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.72850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.29550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.40700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.72850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 353 REMARK 465 LEU A 354 REMARK 465 LYS A 355 REMARK 465 ILE A 356 REMARK 465 PRO A 357 REMARK 465 PHE A 358 REMARK 465 LEU A 359 REMARK 465 ALA A 360 REMARK 465 ASN A 361 REMARK 465 TRP A 362 REMARK 465 GLN A 363 REMARK 465 PHE A 364 REMARK 465 SER A 365 REMARK 465 ARG A 366 REMARK 465 ARG A 367 REMARK 465 ILE A 368 REMARK 465 ILE A 369 REMARK 465 ASP A 370 REMARK 465 TRP A 371 REMARK 465 PHE A 372 REMARK 465 ALA A 373 REMARK 465 GLU A 374 REMARK 465 LYS A 375 REMARK 465 THR A 376 REMARK 465 GLN A 377 REMARK 465 LYS A 378 REMARK 465 THR A 379 REMARK 465 LYS A 380 REMARK 465 THR A 381 REMARK 465 ARG A 762 REMARK 465 PRO A 763 REMARK 465 THR A 764 REMARK 465 VAL A 765 REMARK 465 ARG A 766 REMARK 465 GLU A 767 REMARK 465 SER A 768 REMARK 465 GLU A 769 REMARK 465 THR A 770 REMARK 465 ASP A 771 REMARK 465 GLN A 772 REMARK 465 ARG A 773 REMARK 465 HIS A 774 REMARK 465 HIS A 775 REMARK 465 HIS A 776 REMARK 465 HIS A 777 REMARK 465 HIS A 778 REMARK 465 HIS A 779 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 758 CG OD1 OD2 REMARK 470 ARG A 760 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 761 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 757 C - N - CA ANGL. DEV. = 13.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 114 75.06 -157.47 REMARK 500 THR A 285 -73.07 -114.29 REMARK 500 THR A 332 -78.74 -124.05 REMARK 500 LEU A 348 -71.99 -68.53 REMARK 500 GLN A 421 42.86 -93.42 REMARK 500 ASP A 493 119.51 -166.32 REMARK 500 LYS A 509 76.04 -68.95 REMARK 500 HIS A 540 -49.60 -27.73 REMARK 500 ASN A 621 73.10 59.93 REMARK 500 THR A 717 -71.63 -124.95 REMARK 500 PHE A 722 -54.73 -127.14 REMARK 500 GLU A 753 41.85 -88.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 L9Q A 801 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L9Q A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LMT A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6N40 RELATED DB: PDB DBREF 6OR2 A 1 773 UNP A0QP27 A0QP27_MYCS2 1 773 SEQADV 6OR2 HIS A 774 UNP A0QP27 EXPRESSION TAG SEQADV 6OR2 HIS A 775 UNP A0QP27 EXPRESSION TAG SEQADV 6OR2 HIS A 776 UNP A0QP27 EXPRESSION TAG SEQADV 6OR2 HIS A 777 UNP A0QP27 EXPRESSION TAG SEQADV 6OR2 HIS A 778 UNP A0QP27 EXPRESSION TAG SEQADV 6OR2 HIS A 779 UNP A0QP27 EXPRESSION TAG SEQRES 1 A 779 MET PHE ALA TRP TRP GLY ARG THR VAL TYR GLN PHE ARG SEQRES 2 A 779 TYR ILE VAL ILE GLY VAL MET VAL ALA LEU CYS LEU GLY SEQRES 3 A 779 GLY GLY VAL TYR GLY ILE SER LEU GLY ASN HIS VAL THR SEQRES 4 A 779 GLN SER GLY PHE TYR ASP GLU GLY SER GLN SER VAL ALA SEQRES 5 A 779 ALA SER LEU ILE GLY ASP GLU VAL TYR GLY ARG ASP ARG SEQRES 6 A 779 THR SER HIS VAL VAL ALA ILE LEU THR PRO PRO ASP ASP SEQRES 7 A 779 LYS LYS VAL THR ASP LYS ALA TRP GLN LYS LYS VAL THR SEQRES 8 A 779 GLU GLU LEU ASP GLN VAL VAL LYS ASP HIS GLU ASP GLN SEQRES 9 A 779 ILE VAL GLY TRP VAL GLY TRP LEU LYS ALA PRO ASP THR SEQRES 10 A 779 THR ASP PRO THR VAL SER ALA MET LYS THR GLN ASP LEU SEQRES 11 A 779 ARG HIS THR PHE ILE SER ILE PRO LEU GLN GLY ASP ASP SEQRES 12 A 779 ASP ASP GLU ILE LEU LYS ASN TYR GLN VAL VAL GLU PRO SEQRES 13 A 779 GLU LEU GLN GLN VAL ASN GLY GLY ASP ILE ARG LEU ALA SEQRES 14 A 779 GLY LEU ASN PRO LEU ALA SER GLU LEU THR GLY THR ILE SEQRES 15 A 779 GLY GLU ASP GLN LYS ARG ALA GLU VAL ALA ALA ILE PRO SEQRES 16 A 779 LEU VAL ALA VAL VAL LEU PHE PHE VAL PHE GLY THR VAL SEQRES 17 A 779 ILE ALA ALA ALA LEU PRO ALA ILE ILE GLY GLY LEU ALA SEQRES 18 A 779 ILE ALA GLY ALA LEU GLY ILE MET ARG LEU VAL ALA GLU SEQRES 19 A 779 PHE THR PRO VAL HIS PHE PHE ALA GLN PRO VAL VAL THR SEQRES 20 A 779 LEU ILE GLY LEU GLY ILE ALA ILE ASP TYR GLY LEU PHE SEQRES 21 A 779 ILE VAL SER ARG PHE ARG GLU GLU ILE ALA GLU GLY TYR SEQRES 22 A 779 ASP THR GLU ALA ALA VAL ARG ARG THR VAL MET THR SER SEQRES 23 A 779 GLY ARG THR VAL VAL PHE SER ALA VAL ILE ILE VAL ALA SEQRES 24 A 779 SER SER VAL PRO LEU LEU LEU PHE PRO GLN GLY PHE LEU SEQRES 25 A 779 LYS SER ILE THR TYR ALA ILE ILE ALA SER VAL MET LEU SEQRES 26 A 779 ALA ALA ILE LEU SER ILE THR VAL LEU ALA ALA ALA LEU SEQRES 27 A 779 ALA ILE LEU GLY PRO ARG VAL ASP ALA LEU GLY VAL THR SEQRES 28 A 779 THR LEU LEU LYS ILE PRO PHE LEU ALA ASN TRP GLN PHE SEQRES 29 A 779 SER ARG ARG ILE ILE ASP TRP PHE ALA GLU LYS THR GLN SEQRES 30 A 779 LYS THR LYS THR ARG GLU GLU VAL GLU ARG GLY PHE TRP SEQRES 31 A 779 GLY ARG LEU VAL ASN VAL VAL MET LYS ARG PRO ILE ALA SEQRES 32 A 779 PHE ALA ALA PRO ILE LEU VAL VAL MET VAL LEU LEU ILE SEQRES 33 A 779 ILE PRO LEU GLY GLN LEU SER LEU GLY GLY ILE SER GLU SEQRES 34 A 779 LYS TYR LEU PRO PRO ASP ASN ALA VAL ARG GLN SER GLN SEQRES 35 A 779 GLU GLN PHE ASP LYS LEU PHE PRO GLY PHE ARG THR GLU SEQRES 36 A 779 PRO LEU THR LEU VAL MET LYS ARG GLU ASP GLY GLU PRO SEQRES 37 A 779 ILE THR ASP ALA GLN ILE ALA ASP MET ARG ALA LYS ALA SEQRES 38 A 779 LEU THR VAL SER GLY PHE THR ASP PRO ASP ASN ASP PRO SEQRES 39 A 779 GLU LYS MET TRP LYS GLU ARG PRO ALA ASN ASP SER GLY SEQRES 40 A 779 SER LYS ASP PRO SER VAL ARG VAL ILE GLN ASN GLY LEU SEQRES 41 A 779 GLU ASN ARG ASN ASP ALA ALA LYS LYS ILE ASP GLU LEU SEQRES 42 A 779 ARG ALA LEU GLN PRO PRO HIS GLY ILE GLU VAL PHE VAL SEQRES 43 A 779 GLY GLY THR PRO ALA LEU GLU GLN ASP SER ILE HIS SER SEQRES 44 A 779 LEU PHE ASP LYS LEU PRO LEU MET ALA LEU ILE LEU ILE SEQRES 45 A 779 VAL THR THR THR VAL LEU MET PHE LEU ALA PHE GLY SER SEQRES 46 A 779 VAL VAL LEU PRO ILE LYS ALA ALA LEU MET SER ALA LEU SEQRES 47 A 779 THR LEU GLY SER THR MET GLY ILE LEU THR TRP MET PHE SEQRES 48 A 779 VAL ASP GLY HIS GLY SER GLY LEU MET ASN TYR THR PRO SEQRES 49 A 779 GLN PRO LEU MET ALA PRO MET ILE GLY LEU ILE ILE ALA SEQRES 50 A 779 VAL ILE TRP GLY LEU SER THR ASP TYR GLU VAL PHE LEU SEQRES 51 A 779 VAL SER ARG MET VAL GLU ALA ARG GLU ARG GLY MET SER SEQRES 52 A 779 THR ALA GLU ALA ILE ARG ILE GLY THR ALA THR THR GLY SEQRES 53 A 779 ARG LEU ILE THR GLY ALA ALA LEU ILE LEU ALA VAL VAL SEQRES 54 A 779 ALA GLY ALA PHE VAL PHE SER ASP LEU VAL MET MET LYS SEQRES 55 A 779 TYR LEU ALA PHE GLY LEU LEU ILE ALA LEU LEU LEU ASP SEQRES 56 A 779 ALA THR ILE ILE ARG MET PHE LEU VAL PRO ALA VAL MET SEQRES 57 A 779 LYS LEU LEU GLY ASP ASP CYS TRP TRP ALA PRO ARG TRP SEQRES 58 A 779 MET LYS ARG VAL GLN GLU LYS LEU GLY LEU GLY GLU THR SEQRES 59 A 779 GLU LEU PRO ASP GLU ARG LYS ARG PRO THR VAL ARG GLU SEQRES 60 A 779 SER GLU THR ASP GLN ARG HIS HIS HIS HIS HIS HIS HET L9Q A 801 50 HET LMT A 802 35 HETNAM L9Q (1S)-2-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1- HETNAM 2 L9Q [(OCTADECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETSYN L9Q 1-STEAROYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE FORMUL 2 L9Q C41 H80 N O8 P FORMUL 3 LMT C24 H46 O11 FORMUL 4 HOH *11(H2 O) HELIX 1 AA1 MET A 1 PHE A 12 1 12 HELIX 2 AA2 PHE A 12 ILE A 32 1 21 HELIX 3 AA3 SER A 33 HIS A 37 5 5 HELIX 4 AA4 SER A 48 GLY A 62 1 15 HELIX 5 AA5 ASP A 83 HIS A 101 1 19 HELIX 6 AA6 LEU A 112 ALA A 114 5 3 HELIX 7 AA7 ASP A 119 ALA A 124 1 6 HELIX 8 AA8 ASP A 143 GLN A 160 1 18 HELIX 9 AA9 VAL A 161 GLY A 164 5 4 HELIX 10 AB1 GLY A 170 ALA A 192 1 23 HELIX 11 AB2 ALA A 192 GLY A 206 1 15 HELIX 12 AB3 THR A 207 ALA A 233 1 27 HELIX 13 AB4 PHE A 241 ILE A 249 1 9 HELIX 14 AB5 ILE A 249 GLY A 272 1 24 HELIX 15 AB6 ASP A 274 VAL A 302 1 29 HELIX 16 AB7 PRO A 303 PHE A 307 5 5 HELIX 17 AB8 GLN A 309 ILE A 331 1 23 HELIX 18 AB9 THR A 332 GLY A 342 1 11 HELIX 19 AC1 PRO A 343 ALA A 347 5 5 HELIX 20 AC2 GLU A 383 ARG A 400 1 18 HELIX 21 AC3 PRO A 401 LEU A 415 1 15 HELIX 22 AC4 ILE A 416 LEU A 422 5 7 HELIX 23 AC5 SER A 428 LEU A 432 5 5 HELIX 24 AC6 ASN A 436 PHE A 449 1 14 HELIX 25 AC7 THR A 470 LEU A 482 1 13 HELIX 26 AC8 ASP A 493 MET A 497 5 5 HELIX 27 AC9 ASN A 522 ASN A 524 5 3 HELIX 28 AD1 ASP A 525 ALA A 535 1 11 HELIX 29 AD2 GLY A 548 PHE A 583 1 36 HELIX 30 AD3 VAL A 586 VAL A 612 1 27 HELIX 31 AD4 GLY A 616 ASN A 621 1 6 HELIX 32 AD5 ALA A 629 GLU A 659 1 31 HELIX 33 AD6 SER A 663 THR A 675 1 13 HELIX 34 AD7 THR A 675 VAL A 694 1 20 HELIX 35 AD8 LEU A 698 THR A 717 1 20 HELIX 36 AD9 THR A 717 PHE A 722 1 6 HELIX 37 AE1 PHE A 722 GLY A 732 1 11 HELIX 38 AE2 ASP A 733 TRP A 737 5 5 HELIX 39 AE3 PRO A 739 GLY A 750 1 12 SHEET 1 AA1 4 VAL A 109 GLY A 110 0 SHEET 2 AA1 4 THR A 133 SER A 136 -1 O SER A 136 N VAL A 109 SHEET 3 AA1 4 VAL A 70 LEU A 73 -1 N LEU A 73 O THR A 133 SHEET 4 AA1 4 ILE A 166 ALA A 169 -1 O ALA A 169 N VAL A 70 SHEET 1 AA2 2 LEU A 424 GLY A 425 0 SHEET 2 AA2 2 LEU A 627 MET A 628 1 O LEU A 627 N GLY A 425 SHEET 1 AA3 4 LYS A 499 GLU A 500 0 SHEET 2 AA3 4 VAL A 513 GLY A 519 -1 O GLN A 517 N LYS A 499 SHEET 3 AA3 4 PRO A 456 ARG A 463 -1 N LEU A 459 O ILE A 516 SHEET 4 AA3 4 ILE A 542 GLY A 547 -1 O PHE A 545 N VAL A 460 SITE 1 AC1 14 GLN A 40 PHE A 43 ASP A 64 VAL A 70 SITE 2 AC1 14 LEU A 171 LEU A 174 PHE A 452 ARG A 453 SITE 3 AC1 14 THR A 454 ARG A 501 PRO A 502 ASN A 504 SITE 4 AC1 14 GLN A 517 THR A 549 SITE 1 AC2 5 LEU A 424 GLN A 554 ILE A 557 PHE A 561 SITE 2 AC2 5 LEU A 564 CRYST1 80.814 129.457 154.591 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012374 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006469 0.00000