HEADER LYASE 05-MAY-19 6OUX TITLE STRUCTURE OF SMUL_1544, A DECARBOXYLASE FROM SULFUROSPIRILLUM TITLE 2 MULTIVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: THREONINE PHOSPHATE DECARBOXYLASE-LIKE ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFUROSPIRILLUM MULTIVORANS; SOURCE 3 ORGANISM_TAXID: 66821; SOURCE 4 GENE: SMUL_1544; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DECARBOXYLASE, SMUL_1544, ETHANOLAMINE O-PHOSPHATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.WETTERHORN,I.RAYMENT,A.VECELLIO,M.SEEGER,S.KELLER,T.SCHUBERT REVDAT 5 11-OCT-23 6OUX 1 REMARK REVDAT 4 18-DEC-19 6OUX 1 REMARK REVDAT 3 20-NOV-19 6OUX 1 JRNL REVDAT 2 31-JUL-19 6OUX 1 JRNL REVDAT 1 05-JUN-19 6OUX 0 JRNL AUTH S.KELLER,K.M.WETTERHORN,A.VECELLIO,M.SEEGER,I.RAYMENT, JRNL AUTH 2 T.SCHUBERT JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF AN L-SERINE JRNL TITL 2 O-PHOSPHATE DECARBOXYLASE INVOLVED IN NORCOBAMIDE JRNL TITL 3 BIOSYNTHESIS. JRNL REF FEBS LETT. V. 593 3040 2019 JRNL REFN ISSN 0014-5793 JRNL PMID 31325159 JRNL DOI 10.1002/1873-3468.13543 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 55968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2932 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2661 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6029 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 499 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.187 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6148 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5968 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8298 ; 1.953 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13730 ; 0.944 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 743 ; 6.764 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 288 ;34.954 ;24.271 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1129 ;15.858 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;17.016 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 929 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6858 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1405 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2984 ; 2.282 ; 2.242 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2983 ; 2.282 ; 2.242 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3723 ; 3.354 ; 3.347 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3724 ; 3.353 ; 3.347 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3164 ; 3.089 ; 2.652 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3165 ; 3.088 ; 2.652 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4576 ; 4.814 ; 3.834 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7421 ; 7.300 ;19.127 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7262 ; 7.063 ;18.920 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6OUX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55968 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 1LC8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-(2-HYDROXYETHYL) AMINO REMARK 280 -TRIS(HYDROXYMETHYL) METHANE (BIS-TRIS) (PH 6.0), 16% REMARK 280 POLY(ETHYLENE GLYCOL) METHYL ETHER 2,000 (MEPEG 2K), AND 200 MM REMARK 280 POTASSIUM GLUTAMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.76500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.31350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.76500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.31350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 0 REMARK 465 SER B 1 REMARK 465 VAL B 2 REMARK 465 ASP B 3 REMARK 465 THR B 4 REMARK 465 MET B 5 REMARK 465 ASN B 6 REMARK 465 ALA B 7 REMARK 465 ARG B 8 REMARK 465 LEU B 19 REMARK 465 LYS B 20 REMARK 465 GLN B 21 REMARK 465 ASN B 22 REMARK 465 ALA B 23 REMARK 465 GLY B 24 REMARK 465 SER B 25 REMARK 465 HIS B 26 REMARK 465 SER B 27 REMARK 465 PRO B 28 REMARK 465 SER B 29 REMARK 465 MET B 30 REMARK 465 GLU B 31 REMARK 465 ASP B 32 REMARK 465 LEU B 33 REMARK 465 LYS B 34 REMARK 465 LYS B 35 REMARK 465 LYS B 73 REMARK 465 LYS B 74 REMARK 465 VAL B 75 REMARK 465 LEU B 76 REMARK 465 THR B 77 REMARK 465 HIS B 78 REMARK 465 TYR B 79 REMARK 465 PRO B 80 REMARK 465 SER B 81 REMARK 465 GLN B 82 REMARK 465 ASP B 390 REMARK 465 SER B 391 REMARK 465 LYS B 392 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 13 O HOH B 401 1.46 REMARK 500 O MET A 30 O HOH A 401 1.66 REMARK 500 N PHE B 16 O HOH B 402 1.78 REMARK 500 SD MET A 36 O HOH A 625 1.89 REMARK 500 O HOH B 532 O HOH B 557 1.91 REMARK 500 N LYS A 34 O HOH A 401 1.99 REMARK 500 NE2 GLN B 68 O HOH B 403 2.01 REMARK 500 SD MET A 329 O HOH A 638 2.04 REMARK 500 O THR B 13 O HOH B 402 2.06 REMARK 500 N ALA A 0 O HOH A 402 2.07 REMARK 500 OD1 ASP A 390 O HOH A 403 2.09 REMARK 500 NE2 GLN B 83 CB ASN B 273 2.12 REMARK 500 O TYR B 48 NH2 ARG B 372 2.14 REMARK 500 NZ LYS B 14 O HOH B 404 2.14 REMARK 500 OD1 ASP A 3 O HOH A 404 2.17 REMARK 500 CB ALA A 0 O HOH A 626 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 180 C ASN A 180 O 0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 64 NE - CZ - NH1 ANGL. DEV. = -8.4 DEGREES REMARK 500 ARG A 64 NE - CZ - NH2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASN A 180 N - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 PRO A 181 C - N - CA ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO A 181 C - N - CD ANGL. DEV. = 16.5 DEGREES REMARK 500 ASP A 230 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG A 307 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 MET A 324 CG - SD - CE ANGL. DEV. = -18.7 DEGREES REMARK 500 MET B 257 CG - SD - CE ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG B 293 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 372 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG B 372 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 95 50.25 70.05 REMARK 500 ASP A 244 -59.24 -120.26 REMARK 500 ILE A 247 82.15 -178.07 REMARK 500 HIS A 268 -35.80 175.35 REMARK 500 ALA A 325 -166.03 -119.29 REMARK 500 ARG A 372 -151.58 -108.20 REMARK 500 SER A 391 -170.92 104.48 REMARK 500 ASN B 70 -3.69 56.23 REMARK 500 ASN B 326 32.84 -86.84 REMARK 500 ARG B 372 -160.95 -121.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 180 PRO A 181 137.78 REMARK 500 ASP A 390 SER A 391 143.19 REMARK 500 TRP B 272 ASN B 273 145.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 6OUX A 2 392 UNP W6EE14 W6EE14_SULMU 2 392 DBREF 6OUX B 2 392 UNP W6EE14 W6EE14_SULMU 2 392 SEQADV 6OUX ALA A 0 UNP W6EE14 EXPRESSION TAG SEQADV 6OUX SER A 1 UNP W6EE14 EXPRESSION TAG SEQADV 6OUX ALA B 0 UNP W6EE14 EXPRESSION TAG SEQADV 6OUX SER B 1 UNP W6EE14 EXPRESSION TAG SEQRES 1 A 393 ALA SER VAL ASP THR MET ASN ALA ARG ASN THR GLN PHE SEQRES 2 A 393 THR LYS ALA PHE HIS ALA LEU LYS GLN ASN ALA GLY SER SEQRES 3 A 393 HIS SER PRO SER MET GLU ASP LEU LYS LYS MET PHE PRO SEQRES 4 A 393 THR LEU GLU ILE LYS ILE ASP ALA CYS TYR LEU SER ASN SEQRES 5 A 393 PRO TYR ALA SER GLU LEU VAL LEU ASP TYR ILE ASP ARG SEQRES 6 A 393 GLU LEU ILE GLN THR ASN ALA TYR LYS LYS VAL LEU THR SEQRES 7 A 393 HIS TYR PRO SER GLN GLN ARG SER LEU GLN LYS VAL MET SEQRES 8 A 393 ALA GLU SER LEU HIS VAL LYS PRO GLU ASN ILE PHE ILE SEQRES 9 A 393 GLY ASN GLY ALA THR GLU ILE ILE GLN MET LEU LEU GLN SEQRES 10 A 393 GLN GLU GLU VAL GLN LYS VAL ALA LEU MET ILE PRO THR SEQRES 11 A 393 PHE SER SER TYR TYR GLU PHE VAL GLY LYS GLY CYS GLU SEQRES 12 A 393 VAL VAL TYR PHE PRO LEU ASN GLU ARG ASP ASP TYR SER SEQRES 13 A 393 PHE ASP ALA ASP LYS TYR CYS GLN PHE ILE GLU ASN GLU SEQRES 14 A 393 GLN PRO ASP THR VAL VAL LEU ILE ASN PRO ASN ASN PRO SEQRES 15 A 393 ASN GLY ALA TYR LEU SER LEU GLU LYS MET HIS ILE LEU SEQRES 16 A 393 LEU LYS ARG LEU ALA PHE VAL PRO ARG ILE ILE ILE ASP SEQRES 17 A 393 GLU SER PHE ILE HIS PHE ALA TYR GLU ASP GLU ALA LEU SEQRES 18 A 393 THR CYS LEU SER SER THR VAL LEU PHE ASP MET TYR PRO SEQRES 19 A 393 ASN VAL ILE ILE VAL LYS SER LEU SER LYS ASP PHE GLY SEQRES 20 A 393 ILE ALA GLY VAL ARG LEU GLY TYR ALA LEU MET ASP SER SEQRES 21 A 393 ARG LYS ILE ASP ALA LEU LEU GLU HIS GLY PHE LEU TRP SEQRES 22 A 393 ASN ILE ASN GLY ILE GLY GLU TYR CYS LEU ARG LEU PHE SEQRES 23 A 393 VAL ARG GLU ASP PHE LEU LYS ARG TYR GLU GLU ALA ARG SEQRES 24 A 393 LYS GLN TYR ILE LYS GLU MET CYS ARG PHE LYS GLU ALA SEQRES 25 A 393 LEU LEU GLY ILE GLU ASN VAL TYR VAL TYR PRO SER MET SEQRES 26 A 393 ALA ASN PHE VAL MET LEU LYS LEU PRO SER ARG ILE LYS SEQRES 27 A 393 ALA SER PHE VAL ILE SER ALA LEU LEU VAL GLU TYR GLY SEQRES 28 A 393 ILE TYR VAL ARG THR MET ALA ASP LYS ILE GLY VAL GLU SEQRES 29 A 393 GLY GLU CYS ILE ARG ILE ALA GLY ARG THR ARG GLU GLU SEQRES 30 A 393 ASN ASN CYS ILE VAL MET ALA LEU LYS SER ILE LEU LYS SEQRES 31 A 393 ASP SER LYS SEQRES 1 B 393 ALA SER VAL ASP THR MET ASN ALA ARG ASN THR GLN PHE SEQRES 2 B 393 THR LYS ALA PHE HIS ALA LEU LYS GLN ASN ALA GLY SER SEQRES 3 B 393 HIS SER PRO SER MET GLU ASP LEU LYS LYS MET PHE PRO SEQRES 4 B 393 THR LEU GLU ILE LYS ILE ASP ALA CYS TYR LEU SER ASN SEQRES 5 B 393 PRO TYR ALA SER GLU LEU VAL LEU ASP TYR ILE ASP ARG SEQRES 6 B 393 GLU LEU ILE GLN THR ASN ALA TYR LYS LYS VAL LEU THR SEQRES 7 B 393 HIS TYR PRO SER GLN GLN ARG SER LEU GLN LYS VAL MET SEQRES 8 B 393 ALA GLU SER LEU HIS VAL LYS PRO GLU ASN ILE PHE ILE SEQRES 9 B 393 GLY ASN GLY ALA THR GLU ILE ILE GLN MET LEU LEU GLN SEQRES 10 B 393 GLN GLU GLU VAL GLN LYS VAL ALA LEU MET ILE PRO THR SEQRES 11 B 393 PHE SER SER TYR TYR GLU PHE VAL GLY LYS GLY CYS GLU SEQRES 12 B 393 VAL VAL TYR PHE PRO LEU ASN GLU ARG ASP ASP TYR SER SEQRES 13 B 393 PHE ASP ALA ASP LYS TYR CYS GLN PHE ILE GLU ASN GLU SEQRES 14 B 393 GLN PRO ASP THR VAL VAL LEU ILE ASN PRO ASN ASN PRO SEQRES 15 B 393 ASN GLY ALA TYR LEU SER LEU GLU LYS MET HIS ILE LEU SEQRES 16 B 393 LEU LYS ARG LEU ALA PHE VAL PRO ARG ILE ILE ILE ASP SEQRES 17 B 393 GLU SER PHE ILE HIS PHE ALA TYR GLU ASP GLU ALA LEU SEQRES 18 B 393 THR CYS LEU SER SER THR VAL LEU PHE ASP MET TYR PRO SEQRES 19 B 393 ASN VAL ILE ILE VAL LYS SER LEU SER LYS ASP PHE GLY SEQRES 20 B 393 ILE ALA GLY VAL ARG LEU GLY TYR ALA LEU MET ASP SER SEQRES 21 B 393 ARG LYS ILE ASP ALA LEU LEU GLU HIS GLY PHE LEU TRP SEQRES 22 B 393 ASN ILE ASN GLY ILE GLY GLU TYR CYS LEU ARG LEU PHE SEQRES 23 B 393 VAL ARG GLU ASP PHE LEU LYS ARG TYR GLU GLU ALA ARG SEQRES 24 B 393 LYS GLN TYR ILE LYS GLU MET CYS ARG PHE LYS GLU ALA SEQRES 25 B 393 LEU LEU GLY ILE GLU ASN VAL TYR VAL TYR PRO SER MET SEQRES 26 B 393 ALA ASN PHE VAL MET LEU LYS LEU PRO SER ARG ILE LYS SEQRES 27 B 393 ALA SER PHE VAL ILE SER ALA LEU LEU VAL GLU TYR GLY SEQRES 28 B 393 ILE TYR VAL ARG THR MET ALA ASP LYS ILE GLY VAL GLU SEQRES 29 B 393 GLY GLU CYS ILE ARG ILE ALA GLY ARG THR ARG GLU GLU SEQRES 30 B 393 ASN ASN CYS ILE VAL MET ALA LEU LYS SER ILE LEU LYS SEQRES 31 B 393 ASP SER LYS FORMUL 3 HOH *499(H2 O) HELIX 1 AA1 SER A 1 ASN A 6 1 6 HELIX 2 AA2 ASN A 9 LEU A 19 1 11 HELIX 3 AA3 SER A 29 PHE A 37 1 9 HELIX 4 AA4 ASN A 51 LEU A 66 1 16 HELIX 5 AA5 ALA A 71 HIS A 78 1 8 HELIX 6 AA6 GLN A 82 HIS A 95 1 14 HELIX 7 AA7 LYS A 97 GLU A 99 5 3 HELIX 8 AA8 GLY A 106 GLN A 116 1 11 HELIX 9 AA9 TYR A 133 VAL A 137 5 5 HELIX 10 AB1 ASN A 149 ASP A 153 5 5 HELIX 11 AB2 ASP A 157 GLN A 169 1 13 HELIX 12 AB3 SER A 187 LEU A 198 1 12 HELIX 13 AB4 PHE A 210 ALA A 214 5 5 HELIX 14 AB5 SER A 225 TYR A 232 1 8 HELIX 15 AB6 ASP A 258 LEU A 266 1 9 HELIX 16 AB7 ASN A 275 VAL A 286 1 12 HELIX 17 AB8 ARG A 287 GLY A 314 1 28 HELIX 18 AB9 LYS A 337 GLY A 350 1 14 HELIX 19 AC1 THR A 373 LEU A 388 1 16 HELIX 20 AC2 THR B 10 ALA B 18 1 9 HELIX 21 AC3 ASN B 51 LEU B 66 1 16 HELIX 22 AC4 SER B 85 HIS B 95 1 11 HELIX 23 AC5 LYS B 97 GLU B 99 5 3 HELIX 24 AC6 GLY B 106 GLN B 116 1 11 HELIX 25 AC7 SER B 132 VAL B 137 5 6 HELIX 26 AC8 ASN B 149 ASP B 153 5 5 HELIX 27 AC9 ASP B 157 GLN B 169 1 13 HELIX 28 AD1 SER B 187 LEU B 198 1 12 HELIX 29 AD2 PHE B 210 ALA B 214 5 5 HELIX 30 AD3 SER B 225 TYR B 232 1 8 HELIX 31 AD4 ASP B 258 HIS B 268 1 11 HELIX 32 AD5 ASN B 275 VAL B 286 1 12 HELIX 33 AD6 ARG B 287 GLY B 314 1 28 HELIX 34 AD7 LYS B 337 GLY B 350 1 14 HELIX 35 AD8 THR B 373 LYS B 389 1 17 SHEET 1 AA1 2 ILE A 44 ASP A 45 0 SHEET 2 AA1 2 ILE A 351 TYR A 352 1 O TYR A 352 N ILE A 44 SHEET 1 AA2 7 ILE A 101 GLY A 104 0 SHEET 2 AA2 7 GLY A 253 LEU A 256 -1 O ALA A 255 N PHE A 102 SHEET 3 AA2 7 VAL A 235 SER A 240 -1 N LYS A 239 O TYR A 254 SHEET 4 AA2 7 ARG A 203 ASP A 207 1 N ILE A 206 O ILE A 236 SHEET 5 AA2 7 THR A 172 ILE A 176 1 N LEU A 175 O ASP A 207 SHEET 6 AA2 7 LYS A 122 ILE A 127 1 N ALA A 124 O VAL A 174 SHEET 7 AA2 7 GLU A 142 PRO A 147 1 O PHE A 146 N LEU A 125 SHEET 1 AA3 4 TYR A 319 VAL A 320 0 SHEET 2 AA3 4 PHE A 327 LYS A 331 -1 O LYS A 331 N TYR A 319 SHEET 3 AA3 4 CYS A 366 ALA A 370 -1 O ILE A 369 N VAL A 328 SHEET 4 AA3 4 ARG A 354 THR A 355 -1 N ARG A 354 O ARG A 368 SHEET 1 AA4 2 ILE B 44 ASP B 45 0 SHEET 2 AA4 2 ILE B 351 TYR B 352 1 O TYR B 352 N ILE B 44 SHEET 1 AA5 7 ILE B 101 GLY B 104 0 SHEET 2 AA5 7 GLY B 253 LEU B 256 -1 O ALA B 255 N PHE B 102 SHEET 3 AA5 7 VAL B 235 SER B 240 -1 N LYS B 239 O TYR B 254 SHEET 4 AA5 7 ARG B 203 ASP B 207 1 N ILE B 204 O ILE B 236 SHEET 5 AA5 7 THR B 172 ILE B 176 1 N LEU B 175 O ILE B 205 SHEET 6 AA5 7 LYS B 122 ILE B 127 1 N ALA B 124 O THR B 172 SHEET 7 AA5 7 GLU B 142 PRO B 147 1 O VAL B 144 N VAL B 123 SHEET 1 AA6 4 TYR B 319 VAL B 320 0 SHEET 2 AA6 4 PHE B 327 LYS B 331 -1 O LYS B 331 N TYR B 319 SHEET 3 AA6 4 CYS B 366 ALA B 370 -1 O ILE B 369 N VAL B 328 SHEET 4 AA6 4 ARG B 354 THR B 355 -1 N ARG B 354 O ARG B 368 CISPEP 1 SER A 27 PRO A 28 0 -1.41 CISPEP 2 ILE A 127 PRO A 128 0 -0.05 CISPEP 3 ASN A 177 PRO A 178 0 -3.24 CISPEP 4 HIS A 268 GLY A 269 0 7.10 CISPEP 5 ILE B 127 PRO B 128 0 -2.40 CISPEP 6 ASN B 177 PRO B 178 0 -2.05 CISPEP 7 ASN B 180 PRO B 181 0 24.90 CRYST1 141.530 90.627 70.867 90.00 109.96 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007066 0.000000 0.002567 0.00000 SCALE2 0.000000 0.011034 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015013 0.00000