HEADER IMMUNE SYSTEM 08-MAY-19 6OVN TITLE CRYSTAL STRUCTURE OF THE UNLIGANDED CLONE 2 TCR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA CHAIN CLONE 2 TCR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA CHAIN CLONE 2 TCR; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: TRAV (TCRA); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TRBV (TCRB); SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS ALPHA BETA, T-CELL RECEPTOR, RECEPTOR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.SHAHINE,J.ROSSJOHN REVDAT 3 11-OCT-23 6OVN 1 REMARK REVDAT 2 25-DEC-19 6OVN 1 JRNL REVDAT 1 20-NOV-19 6OVN 0 JRNL AUTH P.REININK,A.SHAHINE,S.GRAS,T.Y.CHENG,R.FARQUHAR,K.LOPEZ, JRNL AUTH 2 S.A.SULIMAN,J.F.REIJNEVELD,J.LE NOURS,L.L.TAN,S.R.LEON, JRNL AUTH 3 J.JIMENEZ,R.CALDERON,L.LECCA,M.B.MURRAY,J.ROSSJOHN, JRNL AUTH 4 D.B.MOODY,I.VAN RHIJN JRNL TITL A TCR BETA-CHAIN MOTIF BIASES TOWARD RECOGNITION OF HUMAN JRNL TITL 2 CD1 PROTEINS. JRNL REF J IMMUNOL. V. 203 3395 2019 JRNL REFN ESSN 1550-6606 JRNL PMID 31694911 JRNL DOI 10.4049/JIMMUNOL.1900872 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 59053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6025 - 4.8799 0.99 2713 139 0.1675 0.2082 REMARK 3 2 4.8799 - 3.8746 1.00 2691 141 0.1257 0.1464 REMARK 3 3 3.8746 - 3.3852 1.00 2702 130 0.1434 0.1776 REMARK 3 4 3.3852 - 3.0758 1.00 2673 147 0.1599 0.2043 REMARK 3 5 3.0758 - 2.8555 1.00 2678 139 0.1772 0.1991 REMARK 3 6 2.8555 - 2.6872 1.00 2693 119 0.1810 0.2117 REMARK 3 7 2.6872 - 2.5526 1.00 2692 133 0.1772 0.2033 REMARK 3 8 2.5526 - 2.4415 1.00 2656 145 0.1898 0.1935 REMARK 3 9 2.4415 - 2.3475 1.00 2660 145 0.1824 0.1997 REMARK 3 10 2.3475 - 2.2665 1.00 2665 150 0.1868 0.2132 REMARK 3 11 2.2665 - 2.1957 1.00 2675 153 0.1827 0.2337 REMARK 3 12 2.1957 - 2.1329 1.00 2626 150 0.1797 0.2264 REMARK 3 13 2.1329 - 2.0768 1.00 2676 139 0.1874 0.2270 REMARK 3 14 2.0768 - 2.0261 1.00 2634 125 0.1972 0.2229 REMARK 3 15 2.0261 - 1.9801 1.00 2700 127 0.1881 0.2143 REMARK 3 16 1.9801 - 1.9379 1.00 2708 123 0.1963 0.2269 REMARK 3 17 1.9379 - 1.8992 1.00 2672 124 0.2212 0.2429 REMARK 3 18 1.8992 - 1.8633 1.00 2689 128 0.2261 0.2673 REMARK 3 19 1.8633 - 1.8300 1.00 2639 139 0.2354 0.2542 REMARK 3 20 1.8300 - 1.7990 1.00 2696 139 0.2512 0.2539 REMARK 3 21 1.7990 - 1.7700 1.00 2591 189 0.2652 0.2879 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.4616 77.6540 15.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.3784 T22: 1.5823 REMARK 3 T33: 0.2658 T12: -0.2077 REMARK 3 T13: -0.1282 T23: 0.3157 REMARK 3 L TENSOR REMARK 3 L11: 0.0204 L22: 0.8052 REMARK 3 L33: 0.0983 L12: -0.0762 REMARK 3 L13: 0.0403 L23: -0.1771 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: -1.4106 S13: -0.3367 REMARK 3 S21: 0.6578 S22: -0.3913 S23: -0.4977 REMARK 3 S31: 0.1043 S32: 0.6285 S33: 0.0680 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3415 69.0620 14.0457 REMARK 3 T TENSOR REMARK 3 T11: 0.2248 T22: 0.1892 REMARK 3 T33: 0.2185 T12: 0.0561 REMARK 3 T13: 0.0040 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 3.3853 L22: 0.7005 REMARK 3 L33: 2.0228 L12: 1.2444 REMARK 3 L13: -2.2789 L23: -0.9166 REMARK 3 S TENSOR REMARK 3 S11: -0.0902 S12: -0.2082 S13: -0.2091 REMARK 3 S21: -0.1035 S22: -0.1109 S23: -0.0958 REMARK 3 S31: 0.1669 S32: 0.3499 S33: 0.1657 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1111 85.2890 -7.9006 REMARK 3 T TENSOR REMARK 3 T11: 0.1579 T22: 0.4592 REMARK 3 T33: 0.2412 T12: 0.0470 REMARK 3 T13: 0.0281 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 6.6866 L22: 1.7956 REMARK 3 L33: 1.8936 L12: 1.9331 REMARK 3 L13: -0.8679 L23: -0.3940 REMARK 3 S TENSOR REMARK 3 S11: 0.1026 S12: 0.3387 S13: 0.2984 REMARK 3 S21: -0.0716 S22: -0.0888 S23: 0.1246 REMARK 3 S31: -0.1199 S32: -0.4685 S33: -0.0084 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3780 79.2422 2.3374 REMARK 3 T TENSOR REMARK 3 T11: 0.1180 T22: 0.2339 REMARK 3 T33: 0.1860 T12: 0.0208 REMARK 3 T13: 0.0240 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.7842 L22: 0.7475 REMARK 3 L33: 1.6332 L12: 0.3794 REMARK 3 L13: -0.4073 L23: 0.0980 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: 0.2771 S13: -0.0493 REMARK 3 S21: -0.0212 S22: 0.0299 S23: -0.0860 REMARK 3 S31: -0.0213 S32: 0.3053 S33: -0.0126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OVN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000239912. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 47.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4G8F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.69000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 82.03500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.34500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 GLU A 218 REMARK 465 SER A 219 REMARK 465 SER A 220 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 GLY B 260 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 9 CG CD OE1 NE2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2 REMARK 470 SER A 68 OG REMARK 470 ASP A 81 CG OD1 OD2 REMARK 470 ARG A 95 CD NE CZ NH1 NH2 REMARK 470 ARG A 121 NE CZ NH1 NH2 REMARK 470 LYS A 142 CD CE NZ REMARK 470 GLN A 162 CD OE1 NE2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 ARG A 179 CD NE CZ NH1 NH2 REMARK 470 LYS A 194 CE NZ REMARK 470 ASN B 17 CG OD1 ND2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 LYS B 48 CD CE NZ REMARK 470 ASP B 259 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 179 O HOH B 401 1.99 REMARK 500 O HOH B 409 O HOH B 487 2.02 REMARK 500 O HOH A 516 O HOH B 572 2.13 REMARK 500 NE2 GLN B 217 O HOH B 402 2.14 REMARK 500 O HOH A 514 O HOH B 475 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 531 O HOH B 575 4465 2.16 REMARK 500 O HOH A 531 O HOH B 472 4465 2.17 REMARK 500 O HOH A 447 O HOH B 524 3664 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 68 103.71 -161.89 REMARK 500 ASP A 132 55.44 -158.80 REMARK 500 GLU B 63 -0.33 76.35 REMARK 500 SER B 77 70.75 25.64 REMARK 500 LEU B 109 -46.93 68.67 REMARK 500 PRO B 167 -166.85 -74.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 127 OD1 REMARK 620 2 SER A 156 OG 115.4 REMARK 620 3 HOH A 472 O 62.3 74.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 306 DBREF 6OVN A -1 220 PDB 6OVN 6OVN -1 220 DBREF 6OVN B -1 260 PDB 6OVN 6OVN -1 260 SEQRES 1 A 207 HIS MET SER GLN GLN GLY GLU GLU ASP PRO GLN ALA LEU SEQRES 2 A 207 SER ILE GLN GLU GLY GLU ASN ALA THR MET ASN CYS SER SEQRES 3 A 207 TYR LYS THR SER ILE ASN ASN LEU GLN TRP TYR ARG GLN SEQRES 4 A 207 ASN SER GLY ARG GLY LEU VAL HIS LEU ILE LEU ILE ARG SEQRES 5 A 207 SER ASN GLU ARG GLU LYS HIS SER GLY ARG LEU ARG VAL SEQRES 6 A 207 THR LEU ASP THR SER LYS LYS SER SER SER LEU LEU ILE SEQRES 7 A 207 THR ALA SER ARG ALA ALA ASP THR ALA SER TYR PHE CYS SEQRES 8 A 207 ALA THR ALA ALA VAL GLY GLY PHE LYS THR ILE PHE GLY SEQRES 9 A 207 ALA GLY THR ARG LEU PHE VAL LYS ALA ASN ILE GLN ASN SEQRES 10 A 207 PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SER SEQRES 11 A 207 SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SER SEQRES 12 A 207 GLN THR ASN VAL SER GLN SER LYS ASP SER ASP VAL TYR SEQRES 13 A 207 ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER MET ASP SEQRES 14 A 207 PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN LYS SER SEQRES 15 A 207 ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER ILE ILE SEQRES 16 A 207 PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 B 249 HIS MET ASP THR GLU VAL THR GLN THR PRO LYS HIS LEU SEQRES 2 B 249 VAL MET GLY MET THR ASN LYS LYS SER LEU LYS CYS GLU SEQRES 3 B 249 GLN HIS MET GLY HIS ARG ALA MET TYR TRP TYR LYS GLN SEQRES 4 B 249 LYS ALA LYS LYS PRO PRO GLU LEU MET PHE VAL TYR SER SEQRES 5 B 249 TYR GLU LYS LEU SER ILE ASN GLU SER VAL PRO SER ARG SEQRES 6 B 249 PHE SER PRO GLU SER PRO ASN SER SER LEU LEU ASN LEU SEQRES 7 B 249 HIS LEU HIS ALA LEU GLN PRO GLU ASP SER ALA LEU TYR SEQRES 8 B 249 LEU CYS ALA SER SER PRO LEU GLY ARG GLU GLY LEU ASN SEQRES 9 B 249 THR GLU ALA PHE PHE GLY GLN GLY THR ARG LEU THR VAL SEQRES 10 B 249 VAL GLU ASP LEU ASN LYS VAL PHE PRO PRO GLU VAL ALA SEQRES 11 B 249 VAL PHE GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN SEQRES 12 B 249 LYS ALA THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO SEQRES 13 B 249 ASP HIS VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU SEQRES 14 B 249 VAL HIS SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS SEQRES 15 B 249 GLU GLN PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SEQRES 16 B 249 SER ARG LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO SEQRES 17 B 249 ARG ASN HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SEQRES 18 B 249 SER GLU ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO SEQRES 19 B 249 VAL THR GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA SEQRES 20 B 249 ASP GLY HET NA A 301 1 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET CL B 304 1 HET CL B 305 1 HET CL B 306 1 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NA NA 1+ FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 CL 3(CL 1-) FORMUL 10 HOH *344(H2 O) HELIX 1 AA1 ARG A 95 THR A 99 5 5 HELIX 2 AA2 ARG A 179 ASP A 182 5 4 HELIX 3 AA3 ALA A 198 PHE A 203 1 6 HELIX 4 AA4 VAL B 71 PHE B 76 5 5 HELIX 5 AA5 GLN B 95 SER B 99 5 5 HELIX 6 AA6 ASP B 131 VAL B 135 5 5 HELIX 7 AA7 SER B 146 GLN B 154 1 9 HELIX 8 AA8 ALA B 213 GLN B 217 1 5 SHEET 1 AA1 5 ALA A 10 GLN A 14 0 SHEET 2 AA1 5 THR A 120 LYS A 125 1 O ARG A 121 N LEU A 11 SHEET 3 AA1 5 ALA A 100 ALA A 107 -1 N ALA A 100 O LEU A 122 SHEET 4 AA1 5 ASN A 38 ASN A 45 -1 N GLN A 40 O ALA A 105 SHEET 5 AA1 5 GLY A 49 ARG A 57 -1 O VAL A 51 N ARG A 43 SHEET 1 AA2 4 ALA A 10 GLN A 14 0 SHEET 2 AA2 4 THR A 120 LYS A 125 1 O ARG A 121 N LEU A 11 SHEET 3 AA2 4 ALA A 100 ALA A 107 -1 N ALA A 100 O LEU A 122 SHEET 4 AA2 4 ILE A 115 PHE A 116 -1 O ILE A 115 N THR A 106 SHEET 1 AA3 4 ALA A 19 SER A 24 0 SHEET 2 AA3 4 SER A 86 ILE A 91 -1 O ILE A 91 N ALA A 19 SHEET 3 AA3 4 LEU A 76 ASP A 81 -1 N ASP A 81 O SER A 86 SHEET 4 AA3 4 GLU A 65 SER A 68 -1 N SER A 68 O LEU A 76 SHEET 1 AA4 4 ALA A 134 GLN A 137 0 SHEET 2 AA4 4 SER A 147 THR A 152 -1 O LEU A 150 N TYR A 136 SHEET 3 AA4 4 PHE A 183 SER A 192 -1 O ALA A 190 N CYS A 149 SHEET 4 AA4 4 TYR A 169 ILE A 170 -1 N TYR A 169 O TRP A 191 SHEET 1 AA5 4 ALA A 134 GLN A 137 0 SHEET 2 AA5 4 SER A 147 THR A 152 -1 O LEU A 150 N TYR A 136 SHEET 3 AA5 4 PHE A 183 SER A 192 -1 O ALA A 190 N CYS A 149 SHEET 4 AA5 4 CYS A 174 MET A 178 -1 N LEU A 176 O SER A 185 SHEET 1 AA6 3 VAL B 4 THR B 7 0 SHEET 2 AA6 3 LYS B 19 GLN B 25 -1 O GLU B 24 N THR B 5 SHEET 3 AA6 3 LEU B 89 LEU B 91 -1 O LEU B 91 N LYS B 19 SHEET 1 AA7 6 HIS B 10 GLY B 14 0 SHEET 2 AA7 6 THR B 124 VAL B 129 1 O VAL B 129 N MET B 13 SHEET 3 AA7 6 ALA B 100 SER B 107 -1 N TYR B 102 O THR B 124 SHEET 4 AA7 6 ALA B 38 GLN B 44 -1 N TYR B 42 O LEU B 103 SHEET 5 AA7 6 GLU B 51 SER B 57 -1 O GLU B 51 N LYS B 43 SHEET 6 AA7 6 LYS B 64 ILE B 67 -1 O SER B 66 N VAL B 55 SHEET 1 AA8 4 HIS B 10 GLY B 14 0 SHEET 2 AA8 4 THR B 124 VAL B 129 1 O VAL B 129 N MET B 13 SHEET 3 AA8 4 ALA B 100 SER B 107 -1 N TYR B 102 O THR B 124 SHEET 4 AA8 4 PHE B 119 PHE B 120 -1 O PHE B 119 N SER B 106 SHEET 1 AA9 4 GLU B 139 PHE B 143 0 SHEET 2 AA9 4 LYS B 155 PHE B 165 -1 O VAL B 159 N PHE B 143 SHEET 3 AA9 4 TYR B 203 SER B 212 -1 O LEU B 209 N LEU B 158 SHEET 4 AA9 4 VAL B 185 THR B 187 -1 N CYS B 186 O ARG B 208 SHEET 1 AB1 4 GLU B 139 PHE B 143 0 SHEET 2 AB1 4 LYS B 155 PHE B 165 -1 O VAL B 159 N PHE B 143 SHEET 3 AB1 4 TYR B 203 SER B 212 -1 O LEU B 209 N LEU B 158 SHEET 4 AB1 4 LEU B 192 LYS B 193 -1 N LEU B 192 O ALA B 204 SHEET 1 AB2 4 LYS B 179 VAL B 181 0 SHEET 2 AB2 4 VAL B 170 VAL B 176 -1 N TRP B 174 O VAL B 181 SHEET 3 AB2 4 HIS B 222 PHE B 229 -1 O ARG B 224 N TRP B 175 SHEET 4 AB2 4 GLN B 248 TRP B 255 -1 O GLN B 248 N PHE B 229 SSBOND 1 CYS A 23 CYS A 104 1555 1555 1.99 SSBOND 2 CYS A 149 CYS A 199 1555 1555 2.04 SSBOND 3 CYS A 174 CYS B 186 1555 1555 2.05 SSBOND 4 CYS B 23 CYS B 104 1555 1555 2.00 SSBOND 5 CYS B 160 CYS B 225 1555 1555 2.02 LINK OD1AASN A 127 NA NA A 301 1555 1555 3.06 LINK OG BSER A 156 NA NA A 301 1555 1555 2.93 LINK NA NA A 301 O HOH A 472 1555 1555 2.28 CISPEP 1 THR B 7 PRO B 8 0 -2.63 CISPEP 2 TYR B 166 PRO B 167 0 -4.36 SITE 1 AC1 4 ASN A 127 ILE A 128 SER A 156 HOH A 472 SITE 1 AC2 5 PRO B 8 LYS B 9 GLN B 122 TYR B 230 SITE 2 AC2 5 HOH B 447 SITE 1 AC3 7 GLY A 110 PHE A 112 SER A 180 HOH A 441 SITE 2 AC3 7 LYS B 64 VAL B 211 SER B 212 SITE 1 AC4 4 HIS B 152 GLU B 253 HOH B 433 HOH B 446 SITE 1 AC5 2 ARG B 37 GLU B 63 SITE 1 AC6 1 HOH B 578 SITE 1 AC7 1 HOH B 438 CRYST1 75.188 75.188 109.380 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013300 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009142 0.00000