HEADER TRANSFERASE/STRUCTURAL PROTEIN 13-MAY-19 6OX5 TITLE A SETD3 MUTANT (N255A) IN COMPLEX WITH AN ACTIN PEPTIDE WITH HIS73 TITLE 2 REPLACED WITH LYSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN PEPTIDE; COMPND 3 CHAIN: Y; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ACTIN-HISTIDINE N-METHYLTRANSFERASE; COMPND 8 CHAIN: A; COMPND 9 SYNONYM: SET DOMAIN-CONTAINING PROTEIN 3,HSETD3; COMPND 10 EC: 2.1.1.85; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: SETD3, C14ORF154; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, TRANSFERASE-STRUCTURAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,S.DAI,X.CHENG REVDAT 3 11-OCT-23 6OX5 1 REMARK REVDAT 2 01-JAN-20 6OX5 1 REMARK REVDAT 1 21-AUG-19 6OX5 0 JRNL AUTH S.DAI,J.R.HORTON,C.B.WOODCOCK,A.W.WILKINSON,X.ZHANG, JRNL AUTH 2 O.GOZANI,X.CHENG JRNL TITL STRUCTURAL BASIS FOR THE TARGET SPECIFICITY OF ACTIN JRNL TITL 2 HISTIDINE METHYLTRANSFERASE SETD3. JRNL REF NAT COMMUN V. 10 3541 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31388018 JRNL DOI 10.1038/S41467-019-11554-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.W.WILKINSON,J.DIEP,S.DAI,S.LIU,Y.S.OOI,D.SONG,T.M.LI, REMARK 1 AUTH 2 J.R.HORTON,X.ZHANG,C.LIU,D.V.TRIVEDI,K.M.RUPPEL, REMARK 1 AUTH 3 J.G.VILCHES-MOURE,K.M.CASEY,J.MAK,T.COWAN,J.E.ELIAS, REMARK 1 AUTH 4 C.M.NAGAMINE,J.A.SPUDICH,X.CHENG,J.E.CARETTE,O.GOZANI REMARK 1 TITL SETD3 IS AN ACTIN HISTIDINE METHYLTRANSFERASE THAT PREVENTS REMARK 1 TITL 2 PRIMARY DYSTOCIA. REMARK 1 REF NATURE V. 565 372 2019 REMARK 1 REFN ESSN 1476-4687 REMARK 1 PMID 30626964 REMARK 1 DOI 10.1038/S41586-018-0821-8 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 35025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9423 - 4.9293 0.99 2812 148 0.1597 0.1952 REMARK 3 2 4.9293 - 3.9142 1.00 2715 144 0.1366 0.1945 REMARK 3 3 3.9142 - 3.4199 1.00 2684 140 0.1425 0.1781 REMARK 3 4 3.4199 - 3.1074 0.99 2654 140 0.1653 0.1941 REMARK 3 5 3.1074 - 2.8848 1.00 2665 140 0.1683 0.2238 REMARK 3 6 2.8848 - 2.7148 1.00 2651 140 0.1712 0.2071 REMARK 3 7 2.7148 - 2.5789 1.00 2656 139 0.1735 0.2158 REMARK 3 8 2.5789 - 2.4667 0.99 2618 138 0.1780 0.2286 REMARK 3 9 2.4667 - 2.3717 0.99 2636 138 0.1867 0.2320 REMARK 3 10 2.3717 - 2.2899 0.98 2570 135 0.1858 0.2234 REMARK 3 11 2.2899 - 2.2183 0.90 2373 126 0.2054 0.2655 REMARK 3 12 2.2183 - 2.1549 0.86 2254 118 0.2070 0.2129 REMARK 3 13 2.1549 - 2.0982 0.75 1987 104 0.2105 0.2470 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4154 REMARK 3 ANGLE : 0.632 5635 REMARK 3 CHIRALITY : 0.043 624 REMARK 3 PLANARITY : 0.004 720 REMARK 3 DIHEDRAL : 16.001 2482 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3709 -3.3140 -28.3973 REMARK 3 T TENSOR REMARK 3 T11: 0.2306 T22: 0.2714 REMARK 3 T33: 0.2295 T12: -0.0462 REMARK 3 T13: 0.0179 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 1.9339 L22: 1.1005 REMARK 3 L33: 1.3858 L12: -0.0789 REMARK 3 L13: -0.6512 L23: -0.0594 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: -0.3938 S13: 0.2724 REMARK 3 S21: 0.1503 S22: -0.0004 S23: -0.0816 REMARK 3 S31: -0.2567 S32: 0.2302 S33: -0.1245 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 335 THROUGH 502 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8006 -33.3009 -8.3987 REMARK 3 T TENSOR REMARK 3 T11: 0.2645 T22: 0.2382 REMARK 3 T33: 0.2416 T12: 0.0039 REMARK 3 T13: -0.0114 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 1.4819 L22: 1.0078 REMARK 3 L33: 3.3820 L12: -0.8578 REMARK 3 L13: 1.5730 L23: -1.6681 REMARK 3 S TENSOR REMARK 3 S11: 0.0815 S12: -0.1821 S13: -0.2270 REMARK 3 S21: -0.0494 S22: -0.0016 S23: 0.0134 REMARK 3 S31: 0.3355 S32: -0.0891 S33: -0.0441 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 66 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5622 -14.3850 -19.7964 REMARK 3 T TENSOR REMARK 3 T11: 0.4951 T22: 0.9790 REMARK 3 T33: 0.5100 T12: -0.0082 REMARK 3 T13: -0.1932 T23: -0.0468 REMARK 3 L TENSOR REMARK 3 L11: 5.1301 L22: 6.0912 REMARK 3 L33: 4.8980 L12: 5.4708 REMARK 3 L13: 0.4728 L23: 0.0603 REMARK 3 S TENSOR REMARK 3 S11: 0.1576 S12: -0.6482 S13: 0.0135 REMARK 3 S21: 1.9735 S22: 0.0829 S23: -2.1798 REMARK 3 S31: 0.5904 S32: 1.5179 S33: -0.2545 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 71 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3591 -11.6995 -24.0265 REMARK 3 T TENSOR REMARK 3 T11: 0.3104 T22: 0.5666 REMARK 3 T33: 0.2218 T12: -0.0003 REMARK 3 T13: 0.0333 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 8.3303 L22: 6.5074 REMARK 3 L33: 3.6968 L12: -5.5067 REMARK 3 L13: -3.5778 L23: 4.8536 REMARK 3 S TENSOR REMARK 3 S11: -0.6701 S12: -1.2497 S13: -0.3963 REMARK 3 S21: 0.6286 S22: 0.0423 S23: 0.0235 REMARK 3 S31: 0.7499 S32: 0.6840 S33: 0.5620 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 76 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5119 -3.5901 -14.3786 REMARK 3 T TENSOR REMARK 3 T11: 0.5398 T22: 0.7138 REMARK 3 T33: 0.3853 T12: -0.0096 REMARK 3 T13: 0.0479 T23: -0.0892 REMARK 3 L TENSOR REMARK 3 L11: 5.4001 L22: 6.3440 REMARK 3 L33: 2.5335 L12: -4.5384 REMARK 3 L13: -3.5390 L23: 2.2657 REMARK 3 S TENSOR REMARK 3 S11: -0.4816 S12: -0.9180 S13: -0.1760 REMARK 3 S21: 1.1950 S22: 0.0632 S23: 0.6317 REMARK 3 S31: -0.1967 S32: 0.0078 S33: 0.4487 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OX5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35098 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 34.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 16.10 REMARK 200 R MERGE (I) : 0.15800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 1.02200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6MBJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.6 AND 30% (W/V) POLYETHYLENE REMARK 280 GLYCOL 4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.32750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.32750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.23250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.24850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.23250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.24850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 87.32750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.23250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.24850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 87.32750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.23250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.24850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: Y, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 725 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 PRO A -4 REMARK 465 LEU A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 ARG A 5 REMARK 465 VAL A 6 REMARK 465 LYS A 7 REMARK 465 THR A 8 REMARK 465 GLN A 9 REMARK 465 LYS A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 THR A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 GLU A 503 REMARK 465 SER A 504 REMARK 465 ASN A 505 REMARK 465 LEU A 506 REMARK 465 GLY A 507 REMARK 465 LEU A 508 REMARK 465 LEU A 509 REMARK 465 GLU A 510 REMARK 465 SER A 511 REMARK 465 SER A 512 REMARK 465 VAL A 513 REMARK 465 GLY A 514 REMARK 465 ASP A 515 REMARK 465 SER A 516 REMARK 465 ARG A 517 REMARK 465 LEU A 518 REMARK 465 PRO A 519 REMARK 465 LEU A 520 REMARK 465 VAL A 521 REMARK 465 LEU A 522 REMARK 465 ARG A 523 REMARK 465 ASN A 524 REMARK 465 LEU A 525 REMARK 465 GLU A 526 REMARK 465 GLU A 527 REMARK 465 GLU A 528 REMARK 465 ALA A 529 REMARK 465 GLY A 530 REMARK 465 VAL A 531 REMARK 465 GLN A 532 REMARK 465 ASP A 533 REMARK 465 ALA A 534 REMARK 465 LEU A 535 REMARK 465 ASN A 536 REMARK 465 ILE A 537 REMARK 465 ARG A 538 REMARK 465 GLU A 539 REMARK 465 ALA A 540 REMARK 465 ILE A 541 REMARK 465 SER A 542 REMARK 465 LYS A 543 REMARK 465 ALA A 544 REMARK 465 LYS A 545 REMARK 465 ALA A 546 REMARK 465 THR A 547 REMARK 465 GLU A 548 REMARK 465 ASN A 549 REMARK 465 GLY A 550 REMARK 465 LEU A 551 REMARK 465 VAL A 552 REMARK 465 ASN A 553 REMARK 465 GLY A 554 REMARK 465 GLU A 555 REMARK 465 ASN A 556 REMARK 465 SER A 557 REMARK 465 ILE A 558 REMARK 465 PRO A 559 REMARK 465 ASN A 560 REMARK 465 GLY A 561 REMARK 465 THR A 562 REMARK 465 ARG A 563 REMARK 465 SER A 564 REMARK 465 GLU A 565 REMARK 465 ASN A 566 REMARK 465 GLU A 567 REMARK 465 SER A 568 REMARK 465 LEU A 569 REMARK 465 ASN A 570 REMARK 465 GLN A 571 REMARK 465 GLU A 572 REMARK 465 SER A 573 REMARK 465 LYS A 574 REMARK 465 ARG A 575 REMARK 465 ALA A 576 REMARK 465 VAL A 577 REMARK 465 GLU A 578 REMARK 465 ASP A 579 REMARK 465 ALA A 580 REMARK 465 LYS A 581 REMARK 465 GLY A 582 REMARK 465 SER A 583 REMARK 465 SER A 584 REMARK 465 SER A 585 REMARK 465 ASP A 586 REMARK 465 SER A 587 REMARK 465 THR A 588 REMARK 465 ALA A 589 REMARK 465 GLY A 590 REMARK 465 VAL A 591 REMARK 465 LYS A 592 REMARK 465 GLU A 593 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR Y 66 OG1 CG2 REMARK 470 GLU Y 83 CG CD OE1 OE2 REMARK 470 VAL A 19 CG1 CG2 REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 LEU A 25 CG CD1 CD2 REMARK 470 GLN A 33 CG CD OE1 NE2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 GLU A 131 CG CD OE1 OE2 REMARK 470 GLN A 144 CG CD OE1 NE2 REMARK 470 ARG A 146 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 189 CD OE1 OE2 REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 ASP A 236 CG OD1 OD2 REMARK 470 GLU A 260 CG CD OE1 OE2 REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 GLU A 392 CG CD OE1 OE2 REMARK 470 GLU A 414 CD OE1 OE2 REMARK 470 LYS A 441 CD CE NZ REMARK 470 GLU A 445 CG CD OE1 OE2 REMARK 470 LYS A 452 CD CE NZ REMARK 470 LYS A 479 CG CD CE NZ REMARK 470 GLU A 494 CG CD OE1 OE2 REMARK 470 LYS A 500 CG CD CE NZ REMARK 470 TYR A 501 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 502 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 272 -59.08 71.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 609 DBREF 6OX5 Y 66 83 UNP P60709 ACTB_HUMAN 66 83 DBREF 6OX5 A 0 593 UNP Q86TU7 SETD3_HUMAN 1 594 SEQADV 6OX5 LYS Y 73 UNP P60709 HIS 73 ENGINEERED MUTATION SEQADV 6OX5 GLY A -5 UNP Q86TU7 EXPRESSION TAG SEQADV 6OX5 PRO A -4 UNP Q86TU7 EXPRESSION TAG SEQADV 6OX5 LEU A -3 UNP Q86TU7 EXPRESSION TAG SEQADV 6OX5 GLY A -2 UNP Q86TU7 EXPRESSION TAG SEQADV 6OX5 SER A -1 UNP Q86TU7 EXPRESSION TAG SEQADV 6OX5 ALA A 255 UNP Q86TU7 ASN 256 ENGINEERED MUTATION SEQRES 1 Y 18 THR LEU LYS TYR PRO ILE GLU LYS GLY ILE VAL THR ASN SEQRES 2 Y 18 TRP ASP ASP MET GLU SEQRES 1 A 599 GLY PRO LEU GLY SER MET GLY LYS LYS SER ARG VAL LYS SEQRES 2 A 599 THR GLN LYS SER GLY THR GLY ALA THR ALA THR VAL SER SEQRES 3 A 599 PRO LYS GLU ILE LEU ASN LEU THR SER GLU LEU LEU GLN SEQRES 4 A 599 LYS CYS SER SER PRO ALA PRO GLY PRO GLY LYS GLU TRP SEQRES 5 A 599 GLU GLU TYR VAL GLN ILE ARG THR LEU VAL GLU LYS ILE SEQRES 6 A 599 ARG LYS LYS GLN LYS GLY LEU SER VAL THR PHE ASP GLY SEQRES 7 A 599 LYS ARG GLU ASP TYR PHE PRO ASP LEU MET LYS TRP ALA SEQRES 8 A 599 SER GLU ASN GLY ALA SER VAL GLU GLY PHE GLU MET VAL SEQRES 9 A 599 ASN PHE LYS GLU GLU GLY PHE GLY LEU ARG ALA THR ARG SEQRES 10 A 599 ASP ILE LYS ALA GLU GLU LEU PHE LEU TRP VAL PRO ARG SEQRES 11 A 599 LYS LEU LEU MET THR VAL GLU SER ALA LYS ASN SER VAL SEQRES 12 A 599 LEU GLY PRO LEU TYR SER GLN ASP ARG ILE LEU GLN ALA SEQRES 13 A 599 MET GLY ASN ILE ALA LEU ALA PHE HIS LEU LEU CYS GLU SEQRES 14 A 599 ARG ALA SER PRO ASN SER PHE TRP GLN PRO TYR ILE GLN SEQRES 15 A 599 THR LEU PRO SER GLU TYR ASP THR PRO LEU TYR PHE GLU SEQRES 16 A 599 GLU ASP GLU VAL ARG TYR LEU GLN SER THR GLN ALA ILE SEQRES 17 A 599 HIS ASP VAL PHE SER GLN TYR LYS ASN THR ALA ARG GLN SEQRES 18 A 599 TYR ALA TYR PHE TYR LYS VAL ILE GLN THR HIS PRO HIS SEQRES 19 A 599 ALA ASN LYS LEU PRO LEU LYS ASP SER PHE THR TYR GLU SEQRES 20 A 599 ASP TYR ARG TRP ALA VAL SER SER VAL MET THR ARG GLN SEQRES 21 A 599 ALA GLN ILE PRO THR GLU ASP GLY SER ARG VAL THR LEU SEQRES 22 A 599 ALA LEU ILE PRO LEU TRP ASP MET CYS ASN HIS THR ASN SEQRES 23 A 599 GLY LEU ILE THR THR GLY TYR ASN LEU GLU ASP ASP ARG SEQRES 24 A 599 CYS GLU CYS VAL ALA LEU GLN ASP PHE ARG ALA GLY GLU SEQRES 25 A 599 GLN ILE TYR ILE PHE TYR GLY THR ARG SER ASN ALA GLU SEQRES 26 A 599 PHE VAL ILE HIS SER GLY PHE PHE PHE ASP ASN ASN SER SEQRES 27 A 599 HIS ASP ARG VAL LYS ILE LYS LEU GLY VAL SER LYS SER SEQRES 28 A 599 ASP ARG LEU TYR ALA MET LYS ALA GLU VAL LEU ALA ARG SEQRES 29 A 599 ALA GLY ILE PRO THR SER SER VAL PHE ALA LEU HIS PHE SEQRES 30 A 599 THR GLU PRO PRO ILE SER ALA GLN LEU LEU ALA PHE LEU SEQRES 31 A 599 ARG VAL PHE CYS MET THR GLU GLU GLU LEU LYS GLU HIS SEQRES 32 A 599 LEU LEU GLY ASP SER ALA ILE ASP ARG ILE PHE THR LEU SEQRES 33 A 599 GLY ASN SER GLU PHE PRO VAL SER TRP ASP ASN GLU VAL SEQRES 34 A 599 LYS LEU TRP THR PHE LEU GLU ASP ARG ALA SER LEU LEU SEQRES 35 A 599 LEU LYS THR TYR LYS THR THR ILE GLU GLU ASP LYS SER SEQRES 36 A 599 VAL LEU LYS ASN HIS ASP LEU SER VAL ARG ALA LYS MET SEQRES 37 A 599 ALA ILE LYS LEU ARG LEU GLY GLU LYS GLU ILE LEU GLU SEQRES 38 A 599 LYS ALA VAL LYS SER ALA ALA VAL ASN ARG GLU TYR TYR SEQRES 39 A 599 ARG GLN GLN MET GLU GLU LYS ALA PRO LEU PRO LYS TYR SEQRES 40 A 599 GLU GLU SER ASN LEU GLY LEU LEU GLU SER SER VAL GLY SEQRES 41 A 599 ASP SER ARG LEU PRO LEU VAL LEU ARG ASN LEU GLU GLU SEQRES 42 A 599 GLU ALA GLY VAL GLN ASP ALA LEU ASN ILE ARG GLU ALA SEQRES 43 A 599 ILE SER LYS ALA LYS ALA THR GLU ASN GLY LEU VAL ASN SEQRES 44 A 599 GLY GLU ASN SER ILE PRO ASN GLY THR ARG SER GLU ASN SEQRES 45 A 599 GLU SER LEU ASN GLN GLU SER LYS ARG ALA VAL GLU ASP SEQRES 46 A 599 ALA LYS GLY SER SER SER ASP SER THR ALA GLY VAL LYS SEQRES 47 A 599 GLU HET SAH A 601 26 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SAH C14 H20 N6 O5 S FORMUL 4 EDO 8(C2 H6 O2) FORMUL 12 HOH *235(H2 O) HELIX 1 AA1 SER A 20 SER A 37 1 18 HELIX 2 AA2 GLY A 41 GLY A 43 5 3 HELIX 3 AA3 LYS A 44 LYS A 62 1 19 HELIX 4 AA4 LYS A 73 ASN A 88 1 16 HELIX 5 AA5 LYS A 125 LEU A 127 5 3 HELIX 6 AA6 VAL A 130 ASN A 135 1 6 HELIX 7 AA7 LEU A 138 ASP A 145 1 8 HELIX 8 AA8 ASP A 145 MET A 151 1 7 HELIX 9 AA9 MET A 151 ALA A 165 1 15 HELIX 10 AB1 TRP A 171 GLN A 176 1 6 HELIX 11 AB2 THR A 184 PHE A 188 5 5 HELIX 12 AB3 GLU A 189 TYR A 195 1 7 HELIX 13 AB4 ALA A 201 HIS A 226 1 26 HELIX 14 AB5 PRO A 227 ASN A 230 5 4 HELIX 15 AB6 LEU A 232 ASP A 236 5 5 HELIX 16 AB7 THR A 239 GLN A 254 1 16 HELIX 17 AB8 LEU A 272 CYS A 276 5 5 HELIX 18 AB9 SER A 316 GLY A 325 1 10 HELIX 19 AC1 LEU A 348 ALA A 359 1 12 HELIX 20 AC2 SER A 377 CYS A 388 1 12 HELIX 21 AC3 THR A 390 HIS A 397 1 8 HELIX 22 AC4 SER A 402 THR A 409 1 8 HELIX 23 AC5 SER A 418 LYS A 438 1 21 HELIX 24 AC6 THR A 443 HIS A 454 1 12 HELIX 25 AC7 SER A 457 GLU A 494 1 38 SHEET 1 AA1 4 PHE A 95 PHE A 100 0 SHEET 2 AA1 4 GLY A 104 ALA A 109 -1 O ARG A 108 N GLU A 96 SHEET 3 AA1 4 GLN A 307 ILE A 310 -1 O ILE A 308 N LEU A 107 SHEET 4 AA1 4 ASN A 277 HIS A 278 1 N ASN A 277 O ILE A 310 SHEET 1 AA2 3 LEU A 118 PRO A 123 0 SHEET 2 AA2 3 ARG A 293 VAL A 297 -1 O CYS A 294 N VAL A 122 SHEET 3 AA2 3 THR A 285 ASN A 288 -1 N ASN A 288 O ARG A 293 SHEET 1 AA3 3 MET A 128 THR A 129 0 SHEET 2 AA3 3 VAL A 265 LEU A 269 -1 O LEU A 269 N MET A 128 SHEET 3 AA3 3 ALA A 255 PRO A 258 -1 N ILE A 257 O THR A 266 SHEET 1 AA4 2 ARG A 335 GLY A 341 0 SHEET 2 AA4 2 SER A 364 HIS A 370 -1 O PHE A 367 N ILE A 338 CISPEP 1 GLU A 373 PRO A 374 0 -2.59 SITE 1 AC1 19 ARG A 74 GLU A 103 PHE A 105 PRO A 179 SITE 2 AC1 19 THR A 252 ARG A 253 ASP A 274 MET A 275 SITE 3 AC1 19 ASN A 277 HIS A 278 TYR A 312 SER A 324 SITE 4 AC1 19 PHE A 326 EDO A 602 HOH A 796 HOH A 807 SITE 5 AC1 19 HOH A 822 HOH A 828 LYS Y 73 SITE 1 AC2 3 GLU A 103 TYR A 182 SAH A 601 SITE 1 AC3 3 TYR A 195 ARG A 467 HOH A 800 SITE 1 AC4 5 ILE A 24 GLN A 63 TYR A 220 SER A 237 SITE 2 AC4 5 PHE A 238 SITE 1 AC5 8 PRO A 42 GLY A 43 LEU A 399 GLY A 400 SITE 2 AC5 8 ASP A 401 SER A 402 ALA A 403 ARG A 406 SITE 1 AC6 4 ASP A 334 GLY A 469 GLU A 472 HOH A 854 SITE 1 AC7 6 PHE A 70 ARG A 164 ILE A 175 LEU A 178 SITE 2 AC7 6 SER A 180 HOH A 757 SITE 1 AC8 3 ASP A 80 LYS A 83 GLU A 87 SITE 1 AC9 4 ARG A 124 THR A 129 GLU A 131 HOH A 732 CRYST1 60.465 116.497 174.655 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008584 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005726 0.00000