HEADER OXIDOREDUCTASE 15-MAY-19 6OYU TITLE STRUCTURE OF AN ANCESTRAL-RECONSTRUCTED CYTOCHROME P450 1B1 WITH TITLE 2 ALPHA-NAPHTHOFLAVONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 1B1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYP1B1, ANCESTRAL RECONSTRUCTION, MAMMALIAN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.G.BART,K.L.HARRIS,E.E.SCOTT REVDAT 5 11-OCT-23 6OYU 1 REMARK REVDAT 4 13-MAY-20 6OYU 1 JRNL REVDAT 3 06-MAY-20 6OYU 1 JRNL REVDAT 2 25-MAR-20 6OYU 1 JRNL REVDAT 1 18-MAR-20 6OYU 0 JRNL AUTH A.G.BART,K.L.HARRIS,E.M.J.GILLAM,E.E.SCOTT JRNL TITL STRUCTURE OF AN ANCESTRAL MAMMALIAN FAMILY 1B1 CYTOCHROME JRNL TITL 2 P450 WITH INCREASED THERMOSTABILITY. JRNL REF J.BIOL.CHEM. V. 295 5640 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32156703 JRNL DOI 10.1074/JBC.RA119.010727 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 26007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.620 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1569 - 7.1038 0.99 1854 148 0.1767 0.2022 REMARK 3 2 7.1038 - 5.6413 1.00 1806 153 0.2167 0.2585 REMARK 3 3 5.6413 - 4.9290 1.00 1817 148 0.2005 0.2501 REMARK 3 4 4.9290 - 4.4787 1.00 1790 151 0.1695 0.2228 REMARK 3 5 4.4787 - 4.1579 1.00 1796 149 0.1729 0.2244 REMARK 3 6 4.1579 - 3.9128 1.00 1785 146 0.1910 0.2338 REMARK 3 7 3.9128 - 3.7170 1.00 1776 145 0.1862 0.3038 REMARK 3 8 3.7170 - 3.5552 1.00 1808 153 0.1970 0.2736 REMARK 3 9 3.5552 - 3.4184 1.00 1795 148 0.2131 0.2880 REMARK 3 10 3.4184 - 3.3005 1.00 1769 142 0.2317 0.3182 REMARK 3 11 3.3005 - 3.1973 1.00 1782 152 0.2319 0.2885 REMARK 3 12 3.1973 - 3.1059 0.99 1764 145 0.2506 0.3487 REMARK 3 13 3.1059 - 3.0242 0.86 1540 129 0.2667 0.3304 REMARK 3 14 3.0242 - 2.9504 0.53 942 74 0.2681 0.3800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7760 REMARK 3 ANGLE : 0.679 10557 REMARK 3 CHIRALITY : 0.042 1091 REMARK 3 PLANARITY : 0.003 1360 REMARK 3 DIHEDRAL : 21.585 2806 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241262. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27530 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 53.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3PM0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 900 MM SODIUM CITRATE TRIBASIC, 90 MM REMARK 280 TRIS BASE / HCL PH 7.0, 180 MM NACL, 10% GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 82.32050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 82.32050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.15050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 82.32050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 82.32050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.15050 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 82.32050 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 82.32050 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 48.15050 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 82.32050 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 82.32050 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 48.15050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 ALA A 40 REMARK 465 LYS A 41 REMARK 465 LYS A 42 REMARK 465 THR A 43 REMARK 465 SER A 44 REMARK 465 SER A 45 REMARK 465 GLN A 46 REMARK 465 PRO A 47 REMARK 465 GLY A 48 REMARK 465 ILE A 60 REMARK 465 GLY A 61 REMARK 465 ASN A 62 REMARK 465 ALA A 63 REMARK 465 ALA A 64 REMARK 465 GLU A 65 REMARK 465 VAL A 66 REMARK 465 GLY A 67 REMARK 465 SER A 68 REMARK 465 ALA A 69 REMARK 465 GLY A 301 REMARK 465 LYS A 302 REMARK 465 GLU A 303 REMARK 465 GLU A 304 REMARK 465 ALA A 305 REMARK 465 GLU A 306 REMARK 465 GLY A 307 REMARK 465 ASN A 308 REMARK 465 GLY A 309 REMARK 465 ASP A 310 REMARK 465 SER A 311 REMARK 465 GLY A 312 REMARK 465 LYS A 448 REMARK 465 ASN A 449 REMARK 465 GLY A 450 REMARK 465 PHE A 451 REMARK 465 ILE A 452 REMARK 465 HIS A 526 REMARK 465 HIS A 527 REMARK 465 HIS A 528 REMARK 465 HIS A 529 REMARK 465 HIS A 530 REMARK 465 HIS A 531 REMARK 465 MET B 39 REMARK 465 ALA B 40 REMARK 465 LYS B 41 REMARK 465 LYS B 42 REMARK 465 THR B 43 REMARK 465 SER B 44 REMARK 465 SER B 45 REMARK 465 GLN B 46 REMARK 465 PRO B 47 REMARK 465 GLY B 61 REMARK 465 ASN B 62 REMARK 465 ALA B 63 REMARK 465 ALA B 64 REMARK 465 GLU B 65 REMARK 465 VAL B 66 REMARK 465 GLY B 67 REMARK 465 VAL B 300 REMARK 465 GLY B 301 REMARK 465 LYS B 302 REMARK 465 GLU B 303 REMARK 465 GLU B 304 REMARK 465 ALA B 305 REMARK 465 GLU B 306 REMARK 465 GLY B 307 REMARK 465 ASN B 308 REMARK 465 GLY B 309 REMARK 465 ASP B 310 REMARK 465 SER B 311 REMARK 465 HIS B 526 REMARK 465 HIS B 527 REMARK 465 HIS B 528 REMARK 465 HIS B 529 REMARK 465 HIS B 530 REMARK 465 HIS B 531 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 252 H ARG A 255 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 52 124.40 -34.53 REMARK 500 ARG A 80 -47.48 -135.95 REMARK 500 ASN A 98 -53.05 -131.53 REMARK 500 GLN A 110 51.88 -116.71 REMARK 500 THR A 157 -174.33 -63.73 REMARK 500 TYR A 214 175.26 -59.85 REMARK 500 GLN A 332 -71.72 -78.25 REMARK 500 ARG A 366 23.37 -140.24 REMARK 500 VAL A 395 75.03 -106.96 REMARK 500 PHE A 445 46.93 -102.02 REMARK 500 LYS A 454 -41.23 -156.25 REMARK 500 SER A 464 -162.34 -75.33 REMARK 500 LEU A 509 -62.60 60.31 REMARK 500 SER A 515 133.85 -38.81 REMARK 500 SER A 524 -73.10 -122.02 REMARK 500 ASN B 98 -58.12 -131.54 REMARK 500 GLN B 110 56.41 -114.40 REMARK 500 CYS B 212 73.18 -114.98 REMARK 500 VAL B 320 -71.75 -63.29 REMARK 500 VAL B 395 74.49 -107.18 REMARK 500 THR B 407 -163.60 -161.87 REMARK 500 SER B 464 -156.75 -68.98 REMARK 500 LEU B 509 -67.62 62.79 REMARK 500 SER B 515 128.60 -39.05 REMARK 500 SER B 524 115.45 -160.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 470 SG REMARK 620 2 HEM A 605 NA 99.7 REMARK 620 3 HEM A 605 NB 92.6 92.8 REMARK 620 4 HEM A 605 NC 86.6 173.1 89.6 REMARK 620 5 HEM A 605 ND 92.5 89.1 174.2 88.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 470 SG REMARK 620 2 HEM B 605 NA 101.6 REMARK 620 3 HEM B 605 NB 83.5 91.6 REMARK 620 4 HEM B 605 NC 82.0 176.0 90.6 REMARK 620 5 HEM B 605 ND 98.2 89.8 177.5 87.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BHF B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 609 DBREF 6OYU A 39 531 PDB 6OYU 6OYU 39 531 DBREF 6OYU B 39 531 PDB 6OYU 6OYU 39 531 SEQRES 1 A 493 MET ALA LYS LYS THR SER SER GLN PRO GLY SER ARG PRO SEQRES 2 A 493 PRO GLY PRO PHE PRO TRP PRO LEU ILE GLY ASN ALA ALA SEQRES 3 A 493 GLU VAL GLY SER ALA PRO HIS LEU SER PHE ALA ARG LEU SEQRES 4 A 493 ALA ARG ARG TYR GLY ASP VAL PHE GLN ILE ARG LEU GLY SEQRES 5 A 493 SER CYS PRO VAL VAL VAL LEU ASN GLY GLU ARG ALA ILE SEQRES 6 A 493 ARG GLN ALA LEU VAL GLN GLN GLY ALA ALA PHE ALA GLY SEQRES 7 A 493 ARG PRO PRO PHE PRO SER PHE GLN VAL VAL SER GLY GLY SEQRES 8 A 493 ARG SER LEU ALA PHE GLY ARG TYR SER GLU ARG TRP LYS SEQRES 9 A 493 VAL GLN ARG ARG VAL ALA HIS SER THR VAL ARG ALA PHE SEQRES 10 A 493 SER THR GLY GLN PRO ARG SER ARG ARG VAL LEU GLU GLN SEQRES 11 A 493 HIS VAL LEU GLY GLU ALA ARG GLU LEU VAL ARG LEU LEU SEQRES 12 A 493 VAL ARG GLY SER ALA GLY GLY ALA PHE LEU ASP PRO ALA SEQRES 13 A 493 PRO LEU THR VAL VAL ALA VAL ALA ASN VAL MET SER ALA SEQRES 14 A 493 VAL CYS PHE GLY CYS ARG TYR SER HIS ASP ASP ALA GLU SEQRES 15 A 493 PHE ARG GLY LEU LEU SER HIS ASN GLU LYS PHE GLY ARG SEQRES 16 A 493 THR VAL GLY ALA GLY SER LEU VAL ASP VAL LEU PRO TRP SEQRES 17 A 493 LEU GLN ARG PHE PRO ASN PRO VAL ARG THR ALA PHE ARG SEQRES 18 A 493 ASP PHE GLN GLN LEU ASN ARG ASP PHE TYR SER PHE VAL SEQRES 19 A 493 LEU ASP LYS PHE LEU ARG HIS ARG SER SER LEU ARG PRO SEQRES 20 A 493 GLY ALA ALA PRO ARG ASP MET MET ASP ALA PHE ILE HIS SEQRES 21 A 493 THR VAL GLY LYS GLU GLU ALA GLU GLY ASN GLY ASP SER SEQRES 22 A 493 GLY PRO ARG LEU ASP LEU GLU TYR VAL PRO ALA THR VAL SEQRES 23 A 493 THR ASP ILE PHE GLY ALA SER GLN ASP THR LEU SER THR SEQRES 24 A 493 ALA LEU GLN TRP LEU LEU ILE LEU PHE THR ARG TYR PRO SEQRES 25 A 493 GLU VAL GLN ALA ARG VAL GLN GLU GLU LEU ASP ARG VAL SEQRES 26 A 493 VAL GLY ARG ASP ARG LEU PRO CYS MET ASP ASP GLN PRO SEQRES 27 A 493 HIS LEU PRO TYR VAL MET ALA PHE LEU TYR GLU ALA MET SEQRES 28 A 493 ARG PHE SER SER PHE VAL PRO VAL THR ILE PRO HIS ALA SEQRES 29 A 493 THR THR ALA ASP THR SER ILE MET GLY TYR HIS ILE PRO SEQRES 30 A 493 LYS ASP THR VAL VAL PHE VAL ASN GLN TRP SER VAL ASN SEQRES 31 A 493 HIS ASP PRO VAL LYS TRP PRO ASN PRO GLU ASP PHE ASN SEQRES 32 A 493 PRO ALA ARG PHE LEU ASP LYS ASN GLY PHE ILE ASN LYS SEQRES 33 A 493 ASP LEU ALA SER SER VAL MET ILE PHE SER VAL GLY LYS SEQRES 34 A 493 ARG ARG CYS ILE GLY GLU GLU LEU SER LYS MET GLN LEU SEQRES 35 A 493 PHE LEU PHE ILE SER ILE LEU ALA HIS GLN CYS ASN PHE SEQRES 36 A 493 ARG ALA ASN PRO ASP GLU ASP SER LYS MET ASP PHE SER SEQRES 37 A 493 TYR GLY LEU THR ILE LYS PRO LYS SER PHE THR ILE ASN SEQRES 38 A 493 VAL THR LEU ARG SER THR HIS HIS HIS HIS HIS HIS SEQRES 1 B 493 MET ALA LYS LYS THR SER SER GLN PRO GLY SER ARG PRO SEQRES 2 B 493 PRO GLY PRO PHE PRO TRP PRO LEU ILE GLY ASN ALA ALA SEQRES 3 B 493 GLU VAL GLY SER ALA PRO HIS LEU SER PHE ALA ARG LEU SEQRES 4 B 493 ALA ARG ARG TYR GLY ASP VAL PHE GLN ILE ARG LEU GLY SEQRES 5 B 493 SER CYS PRO VAL VAL VAL LEU ASN GLY GLU ARG ALA ILE SEQRES 6 B 493 ARG GLN ALA LEU VAL GLN GLN GLY ALA ALA PHE ALA GLY SEQRES 7 B 493 ARG PRO PRO PHE PRO SER PHE GLN VAL VAL SER GLY GLY SEQRES 8 B 493 ARG SER LEU ALA PHE GLY ARG TYR SER GLU ARG TRP LYS SEQRES 9 B 493 VAL GLN ARG ARG VAL ALA HIS SER THR VAL ARG ALA PHE SEQRES 10 B 493 SER THR GLY GLN PRO ARG SER ARG ARG VAL LEU GLU GLN SEQRES 11 B 493 HIS VAL LEU GLY GLU ALA ARG GLU LEU VAL ARG LEU LEU SEQRES 12 B 493 VAL ARG GLY SER ALA GLY GLY ALA PHE LEU ASP PRO ALA SEQRES 13 B 493 PRO LEU THR VAL VAL ALA VAL ALA ASN VAL MET SER ALA SEQRES 14 B 493 VAL CYS PHE GLY CYS ARG TYR SER HIS ASP ASP ALA GLU SEQRES 15 B 493 PHE ARG GLY LEU LEU SER HIS ASN GLU LYS PHE GLY ARG SEQRES 16 B 493 THR VAL GLY ALA GLY SER LEU VAL ASP VAL LEU PRO TRP SEQRES 17 B 493 LEU GLN ARG PHE PRO ASN PRO VAL ARG THR ALA PHE ARG SEQRES 18 B 493 ASP PHE GLN GLN LEU ASN ARG ASP PHE TYR SER PHE VAL SEQRES 19 B 493 LEU ASP LYS PHE LEU ARG HIS ARG SER SER LEU ARG PRO SEQRES 20 B 493 GLY ALA ALA PRO ARG ASP MET MET ASP ALA PHE ILE HIS SEQRES 21 B 493 THR VAL GLY LYS GLU GLU ALA GLU GLY ASN GLY ASP SER SEQRES 22 B 493 GLY PRO ARG LEU ASP LEU GLU TYR VAL PRO ALA THR VAL SEQRES 23 B 493 THR ASP ILE PHE GLY ALA SER GLN ASP THR LEU SER THR SEQRES 24 B 493 ALA LEU GLN TRP LEU LEU ILE LEU PHE THR ARG TYR PRO SEQRES 25 B 493 GLU VAL GLN ALA ARG VAL GLN GLU GLU LEU ASP ARG VAL SEQRES 26 B 493 VAL GLY ARG ASP ARG LEU PRO CYS MET ASP ASP GLN PRO SEQRES 27 B 493 HIS LEU PRO TYR VAL MET ALA PHE LEU TYR GLU ALA MET SEQRES 28 B 493 ARG PHE SER SER PHE VAL PRO VAL THR ILE PRO HIS ALA SEQRES 29 B 493 THR THR ALA ASP THR SER ILE MET GLY TYR HIS ILE PRO SEQRES 30 B 493 LYS ASP THR VAL VAL PHE VAL ASN GLN TRP SER VAL ASN SEQRES 31 B 493 HIS ASP PRO VAL LYS TRP PRO ASN PRO GLU ASP PHE ASN SEQRES 32 B 493 PRO ALA ARG PHE LEU ASP LYS ASN GLY PHE ILE ASN LYS SEQRES 33 B 493 ASP LEU ALA SER SER VAL MET ILE PHE SER VAL GLY LYS SEQRES 34 B 493 ARG ARG CYS ILE GLY GLU GLU LEU SER LYS MET GLN LEU SEQRES 35 B 493 PHE LEU PHE ILE SER ILE LEU ALA HIS GLN CYS ASN PHE SEQRES 36 B 493 ARG ALA ASN PRO ASP GLU ASP SER LYS MET ASP PHE SER SEQRES 37 B 493 TYR GLY LEU THR ILE LYS PRO LYS SER PHE THR ILE ASN SEQRES 38 B 493 VAL THR LEU ARG SER THR HIS HIS HIS HIS HIS HIS HET BHF A 601 33 HET BHF A 602 33 HET BHF A 603 33 HET BHF A 604 33 HET HEM A 605 73 HET GOL A 606 13 HET GOL A 607 14 HET BHF B 601 33 HET BHF B 602 33 HET BHF B 603 33 HET BHF B 604 33 HET HEM B 605 73 HET GOL B 606 14 HET GOL B 607 14 HET GOL B 608 14 HET GOL B 609 13 HETNAM BHF 2-PHENYL-4H-BENZO[H]CHROMEN-4-ONE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM GOL GLYCEROL HETSYN BHF 7,8-BENZOFLAVONE; ALPHA-NAPHTHOFLAVONE HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 BHF 8(C19 H12 O2) FORMUL 7 HEM 2(C34 H32 FE N4 O4) FORMUL 8 GOL 6(C3 H8 O3) FORMUL 19 HOH *44(H2 O) HELIX 1 AA1 HIS A 71 GLY A 82 1 12 HELIX 2 AA2 GLY A 99 VAL A 108 1 10 HELIX 3 AA3 GLN A 110 ALA A 115 1 6 HELIX 4 AA4 PRO A 121 VAL A 126 1 6 HELIX 5 AA5 SER A 127 ARG A 130 5 4 HELIX 6 AA6 SER A 138 ALA A 154 1 17 HELIX 7 AA7 GLN A 159 SER A 185 1 27 HELIX 8 AA8 PRO A 193 GLY A 211 1 19 HELIX 9 AA9 ASP A 218 LEU A 244 1 27 HELIX 10 AB1 PRO A 245 ARG A 249 5 5 HELIX 11 AB2 ASN A 252 LEU A 283 1 32 HELIX 12 AB3 ASP A 291 THR A 299 1 9 HELIX 13 AB4 GLU A 318 TYR A 349 1 32 HELIX 14 AB5 TYR A 349 GLY A 365 1 17 HELIX 15 AB6 CYS A 371 GLN A 375 5 5 HELIX 16 AB7 LEU A 378 SER A 393 1 16 HELIX 17 AB8 ASN A 423 HIS A 429 1 7 HELIX 18 AB9 ASN A 441 LEU A 446 5 6 HELIX 19 AC1 GLY A 472 GLN A 490 1 19 HELIX 20 AC2 ALA B 69 GLY B 82 1 14 HELIX 21 AC3 GLY B 99 VAL B 108 1 10 HELIX 22 AC4 GLN B 110 ALA B 115 5 6 HELIX 23 AC5 PHE B 120 VAL B 126 1 7 HELIX 24 AC6 SER B 127 ARG B 130 5 4 HELIX 25 AC7 ARG B 140 PHE B 155 1 16 HELIX 26 AC8 GLN B 159 VAL B 165 1 7 HELIX 27 AC9 VAL B 165 GLY B 184 1 20 HELIX 28 AD1 PRO B 193 GLY B 211 1 19 HELIX 29 AD2 ASP B 218 LEU B 244 1 27 HELIX 30 AD3 PRO B 245 ARG B 249 5 5 HELIX 31 AD4 ASN B 252 SER B 281 1 30 HELIX 32 AD5 ASP B 291 THR B 299 1 9 HELIX 33 AD6 GLU B 318 SER B 331 1 14 HELIX 34 AD7 SER B 331 TYR B 349 1 19 HELIX 35 AD8 TYR B 349 GLY B 365 1 17 HELIX 36 AD9 CYS B 371 HIS B 377 5 7 HELIX 37 AE1 LEU B 378 SER B 393 1 16 HELIX 38 AE2 ASN B 423 HIS B 429 1 7 HELIX 39 AE3 ASN B 441 LEU B 446 5 6 HELIX 40 AE4 ASN B 453 SER B 459 1 7 HELIX 41 AE5 VAL B 465 ARG B 469 5 5 HELIX 42 AE6 GLY B 472 GLN B 490 1 19 SHEET 1 AA1 5 PHE A 55 TRP A 57 0 SHEET 2 AA1 5 VAL A 84 LEU A 89 1 O ARG A 88 N TRP A 57 SHEET 3 AA1 5 CYS A 92 LEU A 97 -1 O CYS A 92 N LEU A 89 SHEET 4 AA1 5 VAL A 419 VAL A 422 1 O PHE A 421 N VAL A 95 SHEET 5 AA1 5 HIS A 401 ALA A 402 -1 N HIS A 401 O VAL A 420 SHEET 1 AA2 2 THR A 407 ILE A 409 0 SHEET 2 AA2 2 TYR A 412 ILE A 414 -1 O TYR A 412 N ILE A 409 SHEET 1 AA3 2 CYS A 491 ALA A 495 0 SHEET 2 AA3 2 ILE A 518 LEU A 522 -1 O THR A 521 N ASN A 492 SHEET 1 AA4 2 PHE A 505 SER A 506 0 SHEET 2 AA4 2 LYS A 512 PRO A 513 -1 O LYS A 512 N SER A 506 SHEET 1 AA5 5 PHE B 55 TRP B 57 0 SHEET 2 AA5 5 VAL B 84 LEU B 89 1 O ARG B 88 N PHE B 55 SHEET 3 AA5 5 CYS B 92 LEU B 97 -1 O VAL B 94 N ILE B 87 SHEET 4 AA5 5 VAL B 419 VAL B 422 1 O PHE B 421 N VAL B 95 SHEET 5 AA5 5 HIS B 401 ALA B 402 -1 N HIS B 401 O VAL B 420 SHEET 1 AA6 2 THR B 407 ILE B 409 0 SHEET 2 AA6 2 TYR B 412 ILE B 414 -1 O ILE B 414 N THR B 407 SHEET 1 AA7 2 CYS B 491 ALA B 495 0 SHEET 2 AA7 2 ILE B 518 LEU B 522 -1 O THR B 521 N ASN B 492 SHEET 1 AA8 2 PHE B 505 SER B 506 0 SHEET 2 AA8 2 LYS B 512 PRO B 513 -1 O LYS B 512 N SER B 506 LINK SG CYS A 470 FE HEM A 605 1555 1555 2.67 LINK SG CYS B 470 FE HEM B 605 1555 1555 2.69 CISPEP 1 TRP A 57 PRO A 58 0 -3.05 CISPEP 2 TRP B 57 PRO B 58 0 -2.12 SITE 1 AC1 11 VAL A 126 ALA A 133 PHE A 134 HIS A 227 SITE 2 AC1 11 ASN A 228 PHE A 231 THR A 325 ASP A 326 SITE 3 AC1 11 GLY A 329 ALA A 330 ASP A 333 SITE 1 AC2 6 SER A 239 ILE A 399 PRO A 400 PHE A 421 SITE 2 AC2 6 BHF A 603 GOL A 606 SITE 1 AC3 9 SER A 122 PHE A 123 PHE A 134 PHE A 231 SITE 2 AC3 9 SER A 239 LEU A 509 BHF A 602 GOL A 606 SITE 3 AC3 9 HOH A 701 SITE 1 AC4 8 PRO A 58 PRO A 70 LEU A 89 SER A 239 SITE 2 AC4 8 LEU A 240 TYR A 507 GLY A 508 TRP B 246 SITE 1 AC5 20 ARG A 117 LEU A 132 ALA A 133 TRP A 141 SITE 2 AC5 20 ARG A 145 ILE A 327 SER A 331 THR A 334 SITE 3 AC5 20 LEU A 335 VAL A 395 THR A 398 ILE A 399 SITE 4 AC5 20 HIS A 401 ILE A 462 PHE A 463 SER A 464 SITE 5 AC5 20 ARG A 468 CYS A 470 ILE A 471 LEU A 475 SITE 1 AC6 7 PRO A 70 HIS A 71 PRO A 396 TYR A 507 SITE 2 AC6 7 GLY A 508 BHF A 602 BHF A 603 SITE 1 AC7 7 PHE A 391 SER A 392 TRP A 425 HIS A 429 SITE 2 AC7 7 GLU A 438 PHE A 505 ILE A 511 SITE 1 AC8 11 VAL B 126 PHE B 134 HIS B 227 ASN B 228 SITE 2 AC8 11 PHE B 231 PHE B 268 THR B 325 ASP B 326 SITE 3 AC8 11 GLY B 329 ALA B 330 ASP B 333 SITE 1 AC9 9 PHE B 120 SER B 239 ASP B 242 VAL B 397 SITE 2 AC9 9 THR B 398 ILE B 399 PRO B 400 BHF B 603 SITE 3 AC9 9 BHF B 604 SITE 1 AD1 5 SER B 122 PHE B 134 SER B 239 BHF B 602 SITE 2 AD1 5 HOH B 708 SITE 1 AD2 6 TRP A 246 PHE A 250 PRO B 58 VAL B 243 SITE 2 AD2 6 GLY B 508 BHF B 602 SITE 1 AD3 19 ARG B 117 ALA B 133 TRP B 141 ARG B 145 SITE 2 AD3 19 ILE B 327 SER B 331 THR B 334 LEU B 335 SITE 3 AD3 19 VAL B 395 ILE B 399 HIS B 401 ILE B 462 SITE 4 AD3 19 PHE B 463 SER B 464 ARG B 468 ARG B 469 SITE 5 AD3 19 CYS B 470 ILE B 471 SER B 476 SITE 1 AD4 6 PRO B 70 HIS B 71 TYR B 507 GLY B 508 SITE 2 AD4 6 LEU B 509 ILE B 511 SITE 1 AD5 6 ARG A 164 GLN B 159 ARG B 161 ARG B 164 SITE 2 AD5 6 ALA B 288 PRO B 289 SITE 1 AD6 7 PHE B 123 GLN B 124 VAL B 126 GLY B 129 SITE 2 AD6 7 SER B 131 PHE B 134 GLY B 135 SITE 1 AD7 5 GLU B 220 GLY B 223 LEU B 224 ASP B 267 SITE 2 AD7 5 PHE B 271 CRYST1 164.641 164.641 96.301 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006074 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010384 0.00000