HEADER RNA BINDING PROTEIN 25-MAY-19 6P40 TITLE CRYSTAL STRUCTURE OF FULL LENGTH APOBEC3G FKL COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN B MRNA EDITING ENZYME, CATALYTIC PEPTIDE- COMPND 3 LIKE 3G; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_COMMON: RHESUS MACAQUE; SOURCE 4 ORGANISM_TAXID: 9544; SOURCE 5 GENE: APOBEC3G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS APOBEC3G, HIV, CYTIDINE DEAMINASES, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.J.YANG,S.X.LI,X.S.CHEN REVDAT 2 16-AUG-23 6P40 1 AUTHOR REVDAT 1 12-FEB-20 6P40 0 JRNL AUTH H.YANG,F.ITO,A.D.WOLFE,S.LI,N.MOHAMMADZADEH,R.P.LOVE,M.YAN, JRNL AUTH 2 B.ZIRKLE,A.GABA,L.CHELICO,X.S.CHEN JRNL TITL UNDERSTANDING THE STRUCTURAL BASIS OF HIV-1 RESTRICTION BY JRNL TITL 2 THE FULL LENGTH DOUBLE-DOMAIN APOBEC3G. JRNL REF NAT COMMUN V. 11 632 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32005813 JRNL DOI 10.1038/S41467-020-14377-Y REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 65342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.870 REMARK 3 FREE R VALUE TEST SET COUNT : 3837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7031 - 7.3468 0.98 2302 145 0.1498 0.1781 REMARK 3 2 7.3468 - 5.8350 0.98 2317 151 0.1656 0.1894 REMARK 3 3 5.8350 - 5.0984 0.99 2298 144 0.1600 0.2129 REMARK 3 4 5.0984 - 4.6327 0.99 2341 146 0.1291 0.1784 REMARK 3 5 4.6327 - 4.3009 0.99 2306 146 0.1292 0.2066 REMARK 3 6 4.3009 - 4.0475 0.98 2343 144 0.1401 0.1521 REMARK 3 7 4.0475 - 3.8449 0.99 2323 146 0.1429 0.1895 REMARK 3 8 3.8449 - 3.6776 0.98 2263 141 0.1526 0.2172 REMARK 3 9 3.6776 - 3.5361 0.98 2325 143 0.1584 0.2099 REMARK 3 10 3.5361 - 3.4141 0.98 2307 143 0.1675 0.2348 REMARK 3 11 3.4141 - 3.3074 0.98 2278 143 0.1735 0.2204 REMARK 3 12 3.3074 - 3.2129 0.98 2287 142 0.1911 0.3003 REMARK 3 13 3.2129 - 3.1283 0.97 2260 139 0.1980 0.2574 REMARK 3 14 3.1283 - 3.0520 0.98 2347 148 0.1943 0.2652 REMARK 3 15 3.0520 - 2.9826 0.98 2279 144 0.2078 0.2399 REMARK 3 16 2.9826 - 2.9192 0.98 2335 145 0.2116 0.2703 REMARK 3 17 2.9192 - 2.8608 0.98 2315 145 0.2031 0.3158 REMARK 3 18 2.8608 - 2.8068 0.98 2289 141 0.2132 0.2731 REMARK 3 19 2.8068 - 2.7567 0.98 2363 146 0.2148 0.3056 REMARK 3 20 2.7567 - 2.7099 0.97 2224 138 0.2081 0.1979 REMARK 3 21 2.7099 - 2.6662 0.98 2275 143 0.2219 0.3233 REMARK 3 22 2.6662 - 2.6252 0.97 2337 142 0.2338 0.3369 REMARK 3 23 2.6252 - 2.5866 0.96 2198 136 0.2662 0.3535 REMARK 3 24 2.5866 - 2.5502 0.97 2319 145 0.2694 0.3657 REMARK 3 25 2.5502 - 2.5157 0.96 2241 138 0.2611 0.3085 REMARK 3 26 2.5157 - 2.4831 0.94 2203 136 0.2539 0.3521 REMARK 3 27 2.4831 - 2.4520 0.78 1830 117 0.2628 0.3510 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 7:173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.097 26.658 32.128 REMARK 3 T TENSOR REMARK 3 T11: 0.2379 T22: 0.2438 REMARK 3 T33: 0.2072 T12: 0.0078 REMARK 3 T13: -0.0298 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.2790 L22: 1.1942 REMARK 3 L33: 1.2173 L12: -0.3019 REMARK 3 L13: -0.1975 L23: 0.0839 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: 0.0841 S13: 0.1068 REMARK 3 S21: -0.0662 S22: -0.0724 S23: -0.0701 REMARK 3 S31: -0.1280 S32: -0.0971 S33: -0.0036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 174:350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.597 6.283 21.747 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1942 REMARK 3 T33: 0.1970 T12: -0.0568 REMARK 3 T13: 0.0015 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.6245 L22: 1.6308 REMARK 3 L33: 1.9420 L12: -0.3978 REMARK 3 L13: -0.1455 L23: 0.6853 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.0011 S13: 0.0341 REMARK 3 S21: -0.1721 S22: -0.0263 S23: -0.3161 REMARK 3 S31: -0.1515 S32: 0.0697 S33: 0.0012 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 351:382 OR RESID 701:702 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.929 -8.888 14.176 REMARK 3 T TENSOR REMARK 3 T11: 0.3400 T22: 0.2422 REMARK 3 T33: 0.4764 T12: -0.0626 REMARK 3 T13: 0.1359 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.4487 L22: 0.4271 REMARK 3 L33: 0.5799 L12: 0.2888 REMARK 3 L13: 0.2400 L23: 0.1578 REMARK 3 S TENSOR REMARK 3 S11: -0.0257 S12: -0.1441 S13: 0.1517 REMARK 3 S21: 0.0385 S22: 0.3089 S23: -0.3505 REMARK 3 S31: 0.1366 S32: 0.2443 S33: 0.0189 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 7:173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.800 -32.303 13.097 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.1851 REMARK 3 T33: 0.2351 T12: -0.0132 REMARK 3 T13: 0.0098 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.4774 L22: 1.6842 REMARK 3 L33: 1.2491 L12: 0.1514 REMARK 3 L13: -0.1773 L23: 0.7462 REMARK 3 S TENSOR REMARK 3 S11: 0.0635 S12: 0.0812 S13: -0.0702 REMARK 3 S21: 0.0339 S22: -0.1181 S23: -0.0832 REMARK 3 S31: 0.1596 S32: -0.0157 S33: -0.0385 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 174:350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.776 -12.317 24.315 REMARK 3 T TENSOR REMARK 3 T11: 0.2542 T22: 0.3084 REMARK 3 T33: 0.2991 T12: -0.0811 REMARK 3 T13: 0.0213 T23: -0.0866 REMARK 3 L TENSOR REMARK 3 L11: 0.7070 L22: 1.1727 REMARK 3 L33: -0.0576 L12: -0.3825 REMARK 3 L13: -0.1132 L23: -0.0190 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: 0.0639 S13: -0.1176 REMARK 3 S21: 0.0743 S22: -0.1102 S23: 0.2588 REMARK 3 S31: 0.0708 S32: -0.0593 S33: -0.0020 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND ( RESID 351:382 OR RESID 701:702 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.609 3.719 27.649 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.4306 REMARK 3 T33: 0.5263 T12: -0.0458 REMARK 3 T13: 0.0962 T23: -0.1308 REMARK 3 L TENSOR REMARK 3 L11: 0.4045 L22: 0.5595 REMARK 3 L33: 0.2942 L12: 0.0296 REMARK 3 L13: -0.0658 L23: -0.3279 REMARK 3 S TENSOR REMARK 3 S11: 0.0831 S12: -0.0363 S13: -0.2779 REMARK 3 S21: 0.0636 S22: 0.0225 S23: 0.5311 REMARK 3 S31: -0.2549 S32: -0.0520 S33: 0.0131 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2204 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P40 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34058 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.470 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.9 8% PEG 20K, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.21150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -173.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 PRO A -5 REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 PRO A 3 REMARK 465 GLN A 4 REMARK 465 ILE A 5 REMARK 465 ARG A 6 REMARK 465 ASN A 383 REMARK 465 GLY B -6 REMARK 465 PRO B -5 REMARK 465 GLY B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 PRO B 3 REMARK 465 GLN B 4 REMARK 465 ILE B 5 REMARK 465 ARG B 6 REMARK 465 ASN B 383 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLU A 10 O HOH A 801 2.03 REMARK 500 NH1 ARG A 78 OD2 ASP A 111 2.04 REMARK 500 OH TYR B 125 O HOH B 801 2.12 REMARK 500 ND2 ASN B 22 O HOH B 802 2.15 REMARK 500 O HOH B 816 O HOH B 848 2.16 REMARK 500 NH1 ARG B 239 CG2 THR B 348 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 -75.95 -121.79 REMARK 500 ARG A 194 -72.31 -0.74 REMARK 500 HIS A 195 -46.01 89.70 REMARK 500 HIS A 238 75.47 -117.66 REMARK 500 ARG A 256 118.48 -160.50 REMARK 500 LYS A 270 63.61 39.22 REMARK 500 CYS A 287 176.67 -57.63 REMARK 500 ASN A 301 67.70 -150.48 REMARK 500 ALA A 332 112.25 57.39 REMARK 500 GLN A 379 -123.83 80.94 REMARK 500 ASN A 380 -169.44 177.29 REMARK 500 GLN A 381 -12.07 164.67 REMARK 500 ASP B 31 -71.95 -119.45 REMARK 500 ARG B 194 -76.79 -1.41 REMARK 500 HIS B 195 -65.06 96.27 REMARK 500 HIS B 238 71.73 -114.96 REMARK 500 LYS B 270 64.37 38.31 REMARK 500 ALA B 332 117.84 63.51 REMARK 500 GLN B 379 -105.81 71.25 REMARK 500 ASN B 380 -173.02 176.80 REMARK 500 GLN B 381 -12.80 138.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 ND1 REMARK 620 2 CYS A 97 SG 109.2 REMARK 620 3 CYS A 100 SG 115.4 110.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 257 ND1 REMARK 620 2 CYS A 287 SG 106.5 REMARK 620 3 CYS A 290 SG 107.5 106.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 65 ND1 REMARK 620 2 CYS B 97 SG 109.3 REMARK 620 3 CYS B 100 SG 109.4 98.6 REMARK 620 4 HOH B 828 O 93.7 114.7 130.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 257 ND1 REMARK 620 2 CYS B 287 SG 112.5 REMARK 620 3 CYS B 290 SG 105.1 105.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 702 DBREF 6P40 A 1 383 UNP M1GSK9 M1GSK9_MACMU 1 383 DBREF 6P40 B 1 383 UNP M1GSK9 M1GSK9_MACMU 1 383 SEQADV 6P40 GLY A -6 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 PRO A -5 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY A -4 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY A -3 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 SER A -2 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY A -1 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY A 0 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 TYR A 126 UNP M1GSK9 PHE 126 LINKER SEQADV 6P40 ASP A 128 UNP M1GSK9 LYS 128 LINKER SEQADV 6P40 ALA A 139 UNP M1GSK9 CYS 139 LINKER SEQADV 6P40 GLU A 140 UNP M1GSK9 GLN 140 LINKER SEQADV 6P40 ALA A 141 UNP M1GSK9 LYS 141 LINKER SEQADV 6P40 GLY A 142 UNP M1GSK9 ARG 142 LINKER SEQADV 6P40 A UNP M1GSK9 ASP 143 DELETION SEQADV 6P40 A UNP M1GSK9 GLY 144 DELETION SEQADV 6P40 A UNP M1GSK9 PRO 145 DELETION SEQADV 6P40 A UNP M1GSK9 HIS 146 DELETION SEQADV 6P40 SER A 180 UNP M1GSK9 LYS 180 CONFLICT SEQADV 6P40 SER A 184 UNP M1GSK9 LEU 184 CONFLICT SEQADV 6P40 A UNP M1GSK9 PRO 247 DELETION SEQADV 6P40 A UNP M1GSK9 ASN 248 DELETION SEQADV 6P40 A UNP M1GSK9 ILE 249 DELETION SEQADV 6P40 A UNP M1GSK9 HIS 250 DELETION SEQADV 6P40 A UNP M1GSK9 GLY 251 DELETION SEQADV 6P40 A UNP M1GSK9 PHE 252 DELETION SEQADV 6P40 A UNP M1GSK9 PRO 253 DELETION SEQADV 6P40 A UNP M1GSK9 LYS 254 DELETION SEQADV 6P40 ALA A 259 UNP M1GSK9 GLU 259 CONFLICT SEQADV 6P40 GLY B -6 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 PRO B -5 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY B -4 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY B -3 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 SER B -2 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY B -1 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 GLY B 0 UNP M1GSK9 EXPRESSION TAG SEQADV 6P40 TYR B 126 UNP M1GSK9 PHE 126 LINKER SEQADV 6P40 ASP B 128 UNP M1GSK9 LYS 128 LINKER SEQADV 6P40 ALA B 139 UNP M1GSK9 CYS 139 LINKER SEQADV 6P40 GLU B 140 UNP M1GSK9 GLN 140 LINKER SEQADV 6P40 ALA B 141 UNP M1GSK9 LYS 141 LINKER SEQADV 6P40 GLY B 142 UNP M1GSK9 ARG 142 LINKER SEQADV 6P40 B UNP M1GSK9 ASP 143 DELETION SEQADV 6P40 B UNP M1GSK9 GLY 144 DELETION SEQADV 6P40 B UNP M1GSK9 PRO 145 DELETION SEQADV 6P40 B UNP M1GSK9 HIS 146 DELETION SEQADV 6P40 SER B 180 UNP M1GSK9 LYS 180 CONFLICT SEQADV 6P40 SER B 184 UNP M1GSK9 LEU 184 CONFLICT SEQADV 6P40 B UNP M1GSK9 PRO 247 DELETION SEQADV 6P40 B UNP M1GSK9 ASN 248 DELETION SEQADV 6P40 B UNP M1GSK9 ILE 249 DELETION SEQADV 6P40 B UNP M1GSK9 HIS 250 DELETION SEQADV 6P40 B UNP M1GSK9 GLY 251 DELETION SEQADV 6P40 B UNP M1GSK9 PHE 252 DELETION SEQADV 6P40 B UNP M1GSK9 PRO 253 DELETION SEQADV 6P40 B UNP M1GSK9 LYS 254 DELETION SEQADV 6P40 ALA B 259 UNP M1GSK9 GLU 259 CONFLICT SEQRES 1 A 378 GLY PRO GLY GLY SER GLY GLY MET LYS PRO GLN ILE ARG SEQRES 2 A 378 ASN MET VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER SEQRES 3 A 378 ASN PHE ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR SEQRES 4 A 378 VAL TRP LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER SEQRES 5 A 378 GLY PRO PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL SEQRES 6 A 378 TYR PRO LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU SEQRES 7 A 378 ARG TRP PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN SEQRES 8 A 378 GLU TYR LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS SEQRES 9 A 378 THR ARG CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS SEQRES 10 A 378 ASP PRO LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU SEQRES 11 A 378 TYR TYR TYR TRP ASP PRO ASP TYR GLN GLN ALA LEU ARG SEQRES 12 A 378 ILE LEU ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN SEQRES 13 A 378 TYR ASN GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP SEQRES 14 A 378 GLY ARG GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO SEQRES 15 A 378 SER HIS TYR THR SER LEU GLN ALA THR LEU GLY GLU LEU SEQRES 16 A 378 LEU ARG HIS LEU MET ASP PRO GLY THR PHE THR SER ASN SEQRES 17 A 378 PHE ASN ASN LYS PRO TRP VAL SER GLY GLN HIS GLU THR SEQRES 18 A 378 TYR LEU CYS TYR LYS VAL GLU ARG LEU HIS ASN ASP THR SEQRES 19 A 378 TRP VAL PRO LEU ASN GLN HIS ARG GLY PHE LEU ARG ASN SEQRES 20 A 378 GLN ALA GLY ARG HIS ALA ALA LEU CYS PHE LEU ASP LEU SEQRES 21 A 378 ILE PRO PHE TRP LYS LEU ASP GLY GLN GLN TYR ARG VAL SEQRES 22 A 378 THR CYS PHE THR SER TRP SER PRO CYS PHE SER CYS ALA SEQRES 23 A 378 GLN GLU MET ALA LYS PHE ILE SER ASN ASN GLU HIS VAL SEQRES 24 A 378 SER LEU CYS ILE PHE ALA ALA ARG ILE TYR ASP ASP GLN SEQRES 25 A 378 GLY ARG TYR GLN GLU GLY LEU ARG THR LEU HIS ARG ASP SEQRES 26 A 378 GLY ALA LYS ILE ALA MET MET ASN TYR SER GLU PHE GLU SEQRES 27 A 378 TYR CYS TRP ASP THR PHE VAL ASP ARG GLN GLY ARG PRO SEQRES 28 A 378 PHE GLN PRO TRP ASP GLY LEU ASP GLU HIS SER GLN ALA SEQRES 29 A 378 LEU SER GLY ARG LEU ARG ALA ILE LEU GLN ASN GLN GLY SEQRES 30 A 378 ASN SEQRES 1 B 378 GLY PRO GLY GLY SER GLY GLY MET LYS PRO GLN ILE ARG SEQRES 2 B 378 ASN MET VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER SEQRES 3 B 378 ASN PHE ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR SEQRES 4 B 378 VAL TRP LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER SEQRES 5 B 378 GLY PRO PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL SEQRES 6 B 378 TYR PRO LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU SEQRES 7 B 378 ARG TRP PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN SEQRES 8 B 378 GLU TYR LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS SEQRES 9 B 378 THR ARG CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS SEQRES 10 B 378 ASP PRO LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU SEQRES 11 B 378 TYR TYR TYR TRP ASP PRO ASP TYR GLN GLN ALA LEU ARG SEQRES 12 B 378 ILE LEU ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN SEQRES 13 B 378 TYR ASN GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP SEQRES 14 B 378 GLY ARG GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO SEQRES 15 B 378 SER HIS TYR THR SER LEU GLN ALA THR LEU GLY GLU LEU SEQRES 16 B 378 LEU ARG HIS LEU MET ASP PRO GLY THR PHE THR SER ASN SEQRES 17 B 378 PHE ASN ASN LYS PRO TRP VAL SER GLY GLN HIS GLU THR SEQRES 18 B 378 TYR LEU CYS TYR LYS VAL GLU ARG LEU HIS ASN ASP THR SEQRES 19 B 378 TRP VAL PRO LEU ASN GLN HIS ARG GLY PHE LEU ARG ASN SEQRES 20 B 378 GLN ALA GLY ARG HIS ALA ALA LEU CYS PHE LEU ASP LEU SEQRES 21 B 378 ILE PRO PHE TRP LYS LEU ASP GLY GLN GLN TYR ARG VAL SEQRES 22 B 378 THR CYS PHE THR SER TRP SER PRO CYS PHE SER CYS ALA SEQRES 23 B 378 GLN GLU MET ALA LYS PHE ILE SER ASN ASN GLU HIS VAL SEQRES 24 B 378 SER LEU CYS ILE PHE ALA ALA ARG ILE TYR ASP ASP GLN SEQRES 25 B 378 GLY ARG TYR GLN GLU GLY LEU ARG THR LEU HIS ARG ASP SEQRES 26 B 378 GLY ALA LYS ILE ALA MET MET ASN TYR SER GLU PHE GLU SEQRES 27 B 378 TYR CYS TRP ASP THR PHE VAL ASP ARG GLN GLY ARG PRO SEQRES 28 B 378 PHE GLN PRO TRP ASP GLY LEU ASP GLU HIS SER GLN ALA SEQRES 29 B 378 LEU SER GLY ARG LEU ARG ALA ILE LEU GLN ASN GLN GLY SEQRES 30 B 378 ASN HET ZN A 701 1 HET ZN A 702 1 HET ZN B 701 1 HET ZN B 702 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *111(H2 O) HELIX 1 AA1 ASP A 13 PHE A 21 1 9 HELIX 2 AA2 LYS A 61 TYR A 64 5 4 HELIX 3 AA3 HIS A 65 LEU A 80 1 16 HELIX 4 AA4 CYS A 97 ASP A 111 1 15 HELIX 5 AA5 ASP A 130 ALA A 141 1 12 HELIX 6 AA6 ASN A 153 VAL A 165 1 13 HELIX 7 AA7 ASN A 177 LEU A 193 1 17 HELIX 8 AA8 ASP A 198 PHE A 206 1 9 HELIX 9 AA9 HIS A 257 ILE A 266 1 10 HELIX 10 AB1 PRO A 267 LYS A 270 5 4 HELIX 11 AB2 CYS A 287 ASN A 300 1 14 HELIX 12 AB3 ARG A 319 ASP A 330 1 12 HELIX 13 AB4 ASN A 338 VAL A 350 1 13 HELIX 14 AB5 GLY A 362 LEU A 378 1 17 HELIX 15 AB6 ASP B 13 PHE B 21 1 9 HELIX 16 AB7 LYS B 61 TYR B 64 5 4 HELIX 17 AB8 HIS B 65 GLN B 79 1 15 HELIX 18 AB9 CYS B 97 ASP B 111 1 15 HELIX 19 AC1 ASP B 130 ALA B 141 1 12 HELIX 20 AC2 ASN B 153 VAL B 165 1 13 HELIX 21 AC3 ASN B 177 LEU B 193 1 17 HELIX 22 AC4 ASP B 198 PHE B 206 1 9 HELIX 23 AC5 HIS B 257 ILE B 266 1 10 HELIX 24 AC6 PRO B 267 LYS B 270 5 4 HELIX 25 AC7 CYS B 287 ASN B 300 1 14 HELIX 26 AC8 ARG B 319 ASP B 330 1 12 HELIX 27 AC9 ASN B 338 VAL B 350 1 13 HELIX 28 AD1 GLY B 362 LEU B 378 1 17 SHEET 1 AA1 5 ASP A 50 LYS A 57 0 SHEET 2 AA1 5 THR A 32 THR A 41 -1 N LEU A 35 O PHE A 54 SHEET 3 AA1 5 TYR A 86 TRP A 94 -1 O TYR A 91 N CYS A 36 SHEET 4 AA1 5 VAL A 114 ARG A 122 1 O THR A 115 N VAL A 88 SHEET 5 AA1 5 THR A 148 ILE A 151 1 O THR A 148 N ILE A 118 SHEET 1 AA2 5 THR A 231 ARG A 243 0 SHEET 2 AA2 5 TYR A 219 HIS A 228 -1 N ARG A 226 O VAL A 233 SHEET 3 AA2 5 TYR A 276 THR A 282 -1 O THR A 279 N LYS A 223 SHEET 4 AA2 5 VAL A 304 ALA A 310 1 O CYS A 307 N CYS A 280 SHEET 5 AA2 5 LYS A 333 MET A 336 1 O LYS A 333 N ILE A 308 SHEET 1 AA3 5 ASP B 50 LYS B 57 0 SHEET 2 AA3 5 THR B 32 LYS B 40 -1 N LEU B 35 O PHE B 54 SHEET 3 AA3 5 TYR B 86 TRP B 94 -1 O TYR B 91 N CYS B 36 SHEET 4 AA3 5 VAL B 114 ARG B 122 1 O PHE B 119 N TRP B 90 SHEET 5 AA3 5 THR B 148 ILE B 151 1 O THR B 148 N ILE B 118 SHEET 1 AA4 3 THR B 231 PRO B 234 0 SHEET 2 AA4 3 TYR B 219 HIS B 228 -1 N HIS B 228 O THR B 231 SHEET 3 AA4 3 GLY B 240 ARG B 243 -1 O GLY B 240 N TYR B 222 SHEET 1 AA5 5 THR B 231 PRO B 234 0 SHEET 2 AA5 5 TYR B 219 HIS B 228 -1 N HIS B 228 O THR B 231 SHEET 3 AA5 5 TYR B 276 THR B 282 -1 O PHE B 281 N CYS B 221 SHEET 4 AA5 5 VAL B 304 ALA B 310 1 O SER B 305 N TYR B 276 SHEET 5 AA5 5 LYS B 333 MET B 336 1 O LYS B 333 N ILE B 308 LINK ND1 HIS A 65 ZN ZN A 701 1555 1555 1.97 LINK SG CYS A 97 ZN ZN A 701 1555 1555 2.29 LINK SG CYS A 100 ZN ZN A 701 1555 1555 2.20 LINK ND1 HIS A 257 ZN ZN A 702 1555 1555 2.14 LINK SG CYS A 287 ZN ZN A 702 1555 1555 2.36 LINK SG CYS A 290 ZN ZN A 702 1555 1555 2.12 LINK ND1 HIS B 65 ZN ZN B 701 1555 1555 2.06 LINK SG CYS B 97 ZN ZN B 701 1555 1555 2.37 LINK SG CYS B 100 ZN ZN B 701 1555 1555 2.20 LINK ND1 HIS B 257 ZN ZN B 702 1555 1555 2.05 LINK SG CYS B 287 ZN ZN B 702 1555 1555 2.18 LINK SG CYS B 290 ZN ZN B 702 1555 1555 2.18 LINK ZN ZN B 701 O HOH B 828 1555 1555 2.20 CISPEP 1 TYR A 59 PRO A 60 0 1.77 CISPEP 2 TYR B 59 PRO B 60 0 1.85 SITE 1 AC1 3 HIS A 65 CYS A 97 CYS A 100 SITE 1 AC2 4 HIS A 257 CYS A 287 CYS A 290 HOH A 859 SITE 1 AC3 4 HIS B 65 CYS B 97 CYS B 100 HOH B 828 SITE 1 AC4 3 HIS B 257 CYS B 287 CYS B 290 CRYST1 62.067 86.423 90.158 90.00 101.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016112 0.000000 0.003242 0.00000 SCALE2 0.000000 0.011571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011314 0.00000