HEADER VIRAL PROTEIN, HYDROLASE 04-JUN-19 6P6O TITLE HCV NS3/4A PROTEASE DOMAIN OF GENOTYPE 1A D168E IN COMPLEX WITH TITLE 2 GLECAPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 4A,SERINE PROTEASE NS3; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.98,3.6.1.15,3.6.4.13; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS GENOTYPE 1A (ISOLATE 1); SOURCE 3 ORGANISM_COMMON: HCV; SOURCE 4 ORGANISM_TAXID: 11104; SOURCE 5 STRAIN: ISOLATE 1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HCV NS3/4A PROTEASE HCV PROTEASE DOMAIN GLECAPREVIR, GLE GENOTYPE 1A, KEYWDS 2 VIRAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.TIMM,C.A.SCHIFFER REVDAT 2 11-OCT-23 6P6O 1 COMPND HETNAM REVDAT 1 10-JUN-20 6P6O 0 JRNL AUTH J.TIMM,K.KOSOVRASTI,M.HENES,F.LEIDNER,S.HOU,N.KURT-YILMAZ, JRNL AUTH 2 C.A.SCHIFFER JRNL TITL HCV NS3/4A PROTEASE DOMAIN OF GENOTYPE 1A IN COMPLEX WITH JRNL TITL 2 GLECAPREVIR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 13615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.0892 - 3.4201 1.00 2733 149 0.1546 0.1956 REMARK 3 2 3.4201 - 2.7165 1.00 2604 137 0.1692 0.2045 REMARK 3 3 2.7165 - 2.3736 0.99 2592 131 0.1878 0.2385 REMARK 3 4 2.3736 - 2.1569 0.99 2534 132 0.1881 0.2490 REMARK 3 5 2.1569 - 2.0024 0.97 2474 129 0.1990 0.2330 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1656 REMARK 3 ANGLE : 0.682 2276 REMARK 3 CHIRALITY : 0.047 256 REMARK 3 PLANARITY : 0.004 294 REMARK 3 DIHEDRAL : 11.058 1584 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P6O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13619 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.002 REMARK 200 RESOLUTION RANGE LOW (A) : 21.088 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.16490 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57750 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VOJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5 2% (NH4)2SO4 23% PEG REMARK 280 3350 2 UM ZNCL2 1 MM TCEP, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.57850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.24400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.41900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.24400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.57850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.41900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 LYS A1026 CG CD CE NZ REMARK 470 LYS A1068 CG CD CE NZ REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 1149 O HOH A 1301 1.17 REMARK 500 CE1 HIS A 1149 O HOH A 1301 1.57 REMARK 500 HE ARG A 1011 O HOH A 1311 1.58 REMARK 500 HG CYS A 1099 ZN ZN A 1201 1.59 REMARK 500 O HOH A 1329 O HOH A 1422 1.93 REMARK 500 O HOH A 1304 O HOH A 1481 1.99 REMARK 500 ND1 HIS A 1149 O HOH A 1301 2.02 REMARK 500 O HOH A 1464 O HOH A 1465 2.10 REMARK 500 O HOH A 1435 O HOH A 1461 2.11 REMARK 500 O HOH A 1405 O HOH A 1488 2.12 REMARK 500 O HOH A 1380 O HOH A 1501 2.13 REMARK 500 SG CYS A 1099 O HOH A 1301 2.15 REMARK 500 O HOH A 1429 O HOH A 1432 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1344 O HOH A 1346 4545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 115.7 REMARK 620 3 CYS A1099 SG 85.4 55.8 REMARK 620 4 CYS A1145 SG 110.9 124.7 102.0 REMARK 620 5 HIS A1149 ND1 125.5 86.0 140.2 90.3 REMARK 620 6 HOH A1301 O 116.5 59.2 114.5 121.0 33.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue O31 A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1205 DBREF 6P6O A 990 1000 UNP P26664 POLG_HCV1 1678 1688 DBREF 6P6O A 1004 1181 UNP P26664 POLG_HCV1 1030 1207 SEQADV 6P6O GLY A 980 UNP P26664 EXPRESSION TAG SEQADV 6P6O SER A 981 UNP P26664 EXPRESSION TAG SEQADV 6P6O HIS A 982 UNP P26664 EXPRESSION TAG SEQADV 6P6O MET A 983 UNP P26664 EXPRESSION TAG SEQADV 6P6O ALA A 984 UNP P26664 EXPRESSION TAG SEQADV 6P6O SER A 985 UNP P26664 EXPRESSION TAG SEQADV 6P6O MET A 986 UNP P26664 EXPRESSION TAG SEQADV 6P6O LYS A 987 UNP P26664 EXPRESSION TAG SEQADV 6P6O LYS A 988 UNP P26664 EXPRESSION TAG SEQADV 6P6O LYS A 989 UNP P26664 EXPRESSION TAG SEQADV 6P6O SER A 991 UNP P26664 CYS 1679 ENGINEERED MUTATION SEQADV 6P6O ILE A 998 UNP P26664 VAL 1686 ENGINEERED MUTATION SEQADV 6P6O ASN A 999 UNP P26664 VAL 1687 ENGINEERED MUTATION SEQADV 6P6O SER A 1001 UNP P26664 LINKER SEQADV 6P6O GLY A 1002 UNP P26664 LINKER SEQADV 6P6O ASP A 1003 UNP P26664 LINKER SEQADV 6P6O GLU A 1013 UNP P26664 LEU 1039 ENGINEERED MUTATION SEQADV 6P6O GLU A 1014 UNP P26664 LEU 1040 ENGINEERED MUTATION SEQADV 6P6O GLN A 1017 UNP P26664 ILE 1043 ENGINEERED MUTATION SEQADV 6P6O GLU A 1018 UNP P26664 ILE 1044 ENGINEERED MUTATION SEQADV 6P6O GLN A 1021 UNP P26664 LEU 1047 ENGINEERED MUTATION SEQADV 6P6O THR A 1040 UNP P26664 ALA 1066 ENGINEERED MUTATION SEQADV 6P6O SER A 1047 UNP P26664 CYS 1073 ENGINEERED MUTATION SEQADV 6P6O LEU A 1052 UNP P26664 CYS 1078 ENGINEERED MUTATION SEQADV 6P6O THR A 1072 UNP P26664 ILE 1098 ENGINEERED MUTATION SEQADV 6P6O LYS A 1080 UNP P26664 GLN 1106 ENGINEERED MUTATION SEQADV 6P6O GLN A 1086 UNP P26664 PRO 1112 ENGINEERED MUTATION SEQADV 6P6O GLU A 1168 UNP P26664 ASP 1194 ENGINEERED MUTATION SEQADV 6P6O SER A 1174 UNP P26664 ASN 1200 ENGINEERED MUTATION SEQADV 6P6O ALA A 1181 UNP P26664 SER 1207 ENGINEERED MUTATION SEQRES 1 A 202 GLY SER HIS MET ALA SER MET LYS LYS LYS GLY SER VAL SEQRES 2 A 202 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 202 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU SEQRES 4 A 202 THR SER GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY SEQRES 5 A 202 GLU VAL GLN ILE VAL SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 202 ALA THR SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS SEQRES 7 A 202 GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO SEQRES 8 A 202 VAL THR GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL SEQRES 9 A 202 GLY TRP GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO SEQRES 10 A 202 CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 202 HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER SEQRES 12 A 202 ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU SEQRES 13 A 202 LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO ALA GLY SEQRES 14 A 202 HIS ALA VAL GLY ILE PHE ARG ALA ALA VAL CYS THR ARG SEQRES 15 A 202 GLY VAL ALA LYS ALA VAL GLU PHE ILE PRO VAL GLU SER SEQRES 16 A 202 LEU GLU THR THR MET ARG ALA HET ZN A1201 1 HET O31 A1202 104 HET SO4 A1203 5 HET SO4 A1204 5 HET CL A1205 1 HETNAM ZN ZINC ION HETNAM O31 (3AR,7S,10S,12R,21E,24AR)-7-TERT-BUTYL-N-[(1R,2R)-2- HETNAM 2 O31 (DIFLUOROMETHYL)-1-{[(1-METHYLCYCLOPROPYL) HETNAM 3 O31 SULFONYL]CARBAMOYL}CYCLOP ROPYL]-20,20-DIFLUORO-5,8- HETNAM 4 O31 DIOXO-2,3,3A,5,6,7,8,11,12,20,23,24A-DODECAHYDRO-1H, HETNAM 5 O31 10H-9,12-METHANOCYCLOPENTA[18,19][1,10,17, 3, HETNAM 6 O31 6]TRIOXADIAZACYCLONONADECINO[11,12-B]QUINOXALINE-10- HETNAM 7 O31 CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN O31 GLECAPREVIR FORMUL 2 ZN ZN 2+ FORMUL 3 O31 C38 H46 F4 N6 O9 S FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 CL CL 1- FORMUL 7 HOH *207(H2 O) HELIX 1 AA1 HIS A 982 MET A 986 5 5 HELIX 2 AA2 GLY A 1012 GLY A 1023 1 12 HELIX 3 AA3 TYR A 1056 GLY A 1060 1 5 HELIX 4 AA4 VAL A 1078 LYS A 1080 5 3 HELIX 5 AA5 SER A 1133 LEU A 1135 5 3 HELIX 6 AA6 VAL A 1172 ALA A 1181 1 10 SHEET 1 AA1 7 TYR A1006 GLN A1009 0 SHEET 2 AA1 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 AA1 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 AA1 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 AA1 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 AA1 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 AA1 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA2 7 ASP A1103 VAL A1107 0 SHEET 2 AA2 7 VAL A1113 ARG A1118 -1 O VAL A1116 N LEU A1104 SHEET 3 AA2 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 AA2 7 VAL A1163 PRO A1171 -1 O VAL A1167 N GLY A1124 SHEET 5 AA2 7 ALA A1150 THR A1160 -1 N ALA A1156 O GLU A1168 SHEET 6 AA2 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 AA2 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK SG CYS A1097 ZN ZN A1201 1555 1555 2.30 LINK SG ACYS A1099 ZN ZN A1201 1555 1555 2.35 LINK SG BCYS A1099 ZN ZN A1201 1555 1555 2.71 LINK SG CYS A1145 ZN ZN A1201 1555 1555 2.28 LINK ND1AHIS A1149 ZN ZN A1201 1555 1555 2.11 LINK ZN ZN A1201 O HOH A1301 1555 1555 1.94 SITE 1 AC1 5 CYS A1097 CYS A1099 CYS A1145 HIS A1149 SITE 2 AC1 5 HOH A1301 SITE 1 AC2 22 HIS A 982 GLN A1041 PHE A1043 HIS A1057 SITE 2 AC2 22 ASP A1081 ARG A1123 ILE A1132 LEU A1135 SITE 3 AC2 22 LYS A1136 GLY A1137 SER A1138 SER A1139 SITE 4 AC2 22 PHE A1154 ARG A1155 ALA A1156 ALA A1157 SITE 5 AC2 22 HOH A1329 HOH A1339 HOH A1381 HOH A1414 SITE 6 AC2 22 HOH A1418 HOH A1437 SITE 1 AC3 7 GLN A1008 TYR A1056 HOH A1345 HOH A1415 SITE 2 AC3 7 HOH A1429 HOH A1437 HOH A1439 SITE 1 AC4 5 LYS A 989 THR A1040 ARG A1062 HOH A1305 SITE 2 AC4 5 HOH A1373 SITE 1 AC5 3 ARG A1155 SER A1174 HOH A1441 CRYST1 55.157 58.838 60.488 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018130 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016532 0.00000