data_6P78 # _entry.id 6P78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6P78 WWPDB D_1000242016 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6P78 _pdbx_database_status.recvd_initial_deposition_date 2019-06-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Almo, S.C.' 1 0000-0003-2591-5234 'Grove, T.L.' 2 0000-0002-4763-0646 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 116 _citation.language ? _citation.page_first 19126 _citation.page_last 19135 _citation.title 'Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1909604116 _citation.pdbx_database_id_PubMed 31481610 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yuan, Y.' 1 ? primary 'Zallot, R.' 2 ? primary 'Grove, T.L.' 3 ? primary 'Payan, D.J.' 4 ? primary 'Martin-Verstraete, I.' 5 ? primary 'Sepic, S.' 6 ? primary 'Balamkundu, S.' 7 ? primary 'Neelakandan, R.' 8 ? primary 'Gadi, V.K.' 9 ? primary 'Liu, C.F.' 10 ? primary 'Swairjo, M.A.' 11 ? primary 'Dedon, P.C.' 12 ? primary 'Almo, S.C.' 13 ? primary 'Gerlt, J.A.' 14 ? primary 'de Crecy-Lagard, V.' 15 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6P78 _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.606 _cell.length_a_esd ? _cell.length_b 57.606 _cell.length_b_esd ? _cell.length_c 152.414 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6P78 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Queuine lyase' 29934.082 1 ? ? ? ? 2 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 3 non-polymer syn '2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one' 277.279 1 ? ? ? ? 4 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 5 water nat water 18.015 221 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Radical SAM domain protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMERYSHILEKDKREIVLLKSRPCIWGKCSFCDYIEDNDVDQKENQKINDEVLNKITGQ YGVLEVINSGSFFELPDETIERIYKIIGEKKIKRLYIEAHYLYKKKIKALREKFKIEIIVKTGIETFNDEMRNNVLNKNI HFDKIEEILEDFDSP(SMC)LMVGIQGQTKEMIRKDIEILTKYFDHGTINIYRNNSTPIKRDEELIKWFDEEYHDLKNNR KYDYLGIPTDFGVGD ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMERYSHILEKDKREIVLLKSRPCIWGKCSFCDYIEDNDVDQKENQKINDEVLNKITGQ YGVLEVINSGSFFELPDETIERIYKIIGEKKIKRLYIEAHYLYKKKIKALREKFKIEIIVKTGIETFNDEMRNNVLNKNI HFDKIEEILEDFDSPCLMVGIQGQTKEMIRKDIEILTKYFDHGTINIYRNNSTPIKRDEELIKWFDEEYHDLKNNRKYDY LGIPTDFGVGD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 GLU n 1 25 ARG n 1 26 TYR n 1 27 SER n 1 28 HIS n 1 29 ILE n 1 30 LEU n 1 31 GLU n 1 32 LYS n 1 33 ASP n 1 34 LYS n 1 35 ARG n 1 36 GLU n 1 37 ILE n 1 38 VAL n 1 39 LEU n 1 40 LEU n 1 41 LYS n 1 42 SER n 1 43 ARG n 1 44 PRO n 1 45 CYS n 1 46 ILE n 1 47 TRP n 1 48 GLY n 1 49 LYS n 1 50 CYS n 1 51 SER n 1 52 PHE n 1 53 CYS n 1 54 ASP n 1 55 TYR n 1 56 ILE n 1 57 GLU n 1 58 ASP n 1 59 ASN n 1 60 ASP n 1 61 VAL n 1 62 ASP n 1 63 GLN n 1 64 LYS n 1 65 GLU n 1 66 ASN n 1 67 GLN n 1 68 LYS n 1 69 ILE n 1 70 ASN n 1 71 ASP n 1 72 GLU n 1 73 VAL n 1 74 LEU n 1 75 ASN n 1 76 LYS n 1 77 ILE n 1 78 THR n 1 79 GLY n 1 80 GLN n 1 81 TYR n 1 82 GLY n 1 83 VAL n 1 84 LEU n 1 85 GLU n 1 86 VAL n 1 87 ILE n 1 88 ASN n 1 89 SER n 1 90 GLY n 1 91 SER n 1 92 PHE n 1 93 PHE n 1 94 GLU n 1 95 LEU n 1 96 PRO n 1 97 ASP n 1 98 GLU n 1 99 THR n 1 100 ILE n 1 101 GLU n 1 102 ARG n 1 103 ILE n 1 104 TYR n 1 105 LYS n 1 106 ILE n 1 107 ILE n 1 108 GLY n 1 109 GLU n 1 110 LYS n 1 111 LYS n 1 112 ILE n 1 113 LYS n 1 114 ARG n 1 115 LEU n 1 116 TYR n 1 117 ILE n 1 118 GLU n 1 119 ALA n 1 120 HIS n 1 121 TYR n 1 122 LEU n 1 123 TYR n 1 124 LYS n 1 125 LYS n 1 126 LYS n 1 127 ILE n 1 128 LYS n 1 129 ALA n 1 130 LEU n 1 131 ARG n 1 132 GLU n 1 133 LYS n 1 134 PHE n 1 135 LYS n 1 136 ILE n 1 137 GLU n 1 138 ILE n 1 139 ILE n 1 140 VAL n 1 141 LYS n 1 142 THR n 1 143 GLY n 1 144 ILE n 1 145 GLU n 1 146 THR n 1 147 PHE n 1 148 ASN n 1 149 ASP n 1 150 GLU n 1 151 MET n 1 152 ARG n 1 153 ASN n 1 154 ASN n 1 155 VAL n 1 156 LEU n 1 157 ASN n 1 158 LYS n 1 159 ASN n 1 160 ILE n 1 161 HIS n 1 162 PHE n 1 163 ASP n 1 164 LYS n 1 165 ILE n 1 166 GLU n 1 167 GLU n 1 168 ILE n 1 169 LEU n 1 170 GLU n 1 171 ASP n 1 172 PHE n 1 173 ASP n 1 174 SER n 1 175 PRO n 1 176 SMC n 1 177 LEU n 1 178 MET n 1 179 VAL n 1 180 GLY n 1 181 ILE n 1 182 GLN n 1 183 GLY n 1 184 GLN n 1 185 THR n 1 186 LYS n 1 187 GLU n 1 188 MET n 1 189 ILE n 1 190 ARG n 1 191 LYS n 1 192 ASP n 1 193 ILE n 1 194 GLU n 1 195 ILE n 1 196 LEU n 1 197 THR n 1 198 LYS n 1 199 TYR n 1 200 PHE n 1 201 ASP n 1 202 HIS n 1 203 GLY n 1 204 THR n 1 205 ILE n 1 206 ASN n 1 207 ILE n 1 208 TYR n 1 209 ARG n 1 210 ASN n 1 211 ASN n 1 212 SER n 1 213 THR n 1 214 PRO n 1 215 ILE n 1 216 LYS n 1 217 ARG n 1 218 ASP n 1 219 GLU n 1 220 GLU n 1 221 LEU n 1 222 ILE n 1 223 LYS n 1 224 TRP n 1 225 PHE n 1 226 ASP n 1 227 GLU n 1 228 GLU n 1 229 TYR n 1 230 HIS n 1 231 ASP n 1 232 LEU n 1 233 LYS n 1 234 ASN n 1 235 ASN n 1 236 ARG n 1 237 LYS n 1 238 TYR n 1 239 ASP n 1 240 TYR n 1 241 LEU n 1 242 GLY n 1 243 ILE n 1 244 PRO n 1 245 THR n 1 246 ASP n 1 247 PHE n 1 248 GLY n 1 249 VAL n 1 250 GLY n 1 251 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 251 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CLOSPI_01524 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name '[Clostridium] spiroforme DSM 1552' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 428126 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSGC-His _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B1C2R2_9FIRM _struct_ref.pdbx_db_accession B1C2R2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MERYSHILEKDKREIVLLKSRPCIWGKCSFCDYIEDNDVDQKENQKINDEVLNKITGQYGVLEVINSGSFFELPDETIER IYKIIGEKKIKRLYIEAHYLYKKKIKALREKFKIEIIVKTGIETFNDEMRNNVLNKNIHFDKIEEILEDFDSPCLMVGIQ GQTKEMIRKDIEILTKYFDHGTINIYRNNSTPIKRDEELIKWFDEEYHDLKNNRKYDYLGIPTDFGVGD ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6P78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 251 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B1C2R2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 229 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 229 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6P78 MET A 1 ? UNP B1C2R2 ? ? 'initiating methionine' -21 1 1 6P78 HIS A 2 ? UNP B1C2R2 ? ? 'expression tag' -20 2 1 6P78 HIS A 3 ? UNP B1C2R2 ? ? 'expression tag' -19 3 1 6P78 HIS A 4 ? UNP B1C2R2 ? ? 'expression tag' -18 4 1 6P78 HIS A 5 ? UNP B1C2R2 ? ? 'expression tag' -17 5 1 6P78 HIS A 6 ? UNP B1C2R2 ? ? 'expression tag' -16 6 1 6P78 HIS A 7 ? UNP B1C2R2 ? ? 'expression tag' -15 7 1 6P78 SER A 8 ? UNP B1C2R2 ? ? 'expression tag' -14 8 1 6P78 SER A 9 ? UNP B1C2R2 ? ? 'expression tag' -13 9 1 6P78 GLY A 10 ? UNP B1C2R2 ? ? 'expression tag' -12 10 1 6P78 VAL A 11 ? UNP B1C2R2 ? ? 'expression tag' -11 11 1 6P78 ASP A 12 ? UNP B1C2R2 ? ? 'expression tag' -10 12 1 6P78 LEU A 13 ? UNP B1C2R2 ? ? 'expression tag' -9 13 1 6P78 GLY A 14 ? UNP B1C2R2 ? ? 'expression tag' -8 14 1 6P78 THR A 15 ? UNP B1C2R2 ? ? 'expression tag' -7 15 1 6P78 GLU A 16 ? UNP B1C2R2 ? ? 'expression tag' -6 16 1 6P78 ASN A 17 ? UNP B1C2R2 ? ? 'expression tag' -5 17 1 6P78 LEU A 18 ? UNP B1C2R2 ? ? 'expression tag' -4 18 1 6P78 TYR A 19 ? UNP B1C2R2 ? ? 'expression tag' -3 19 1 6P78 PHE A 20 ? UNP B1C2R2 ? ? 'expression tag' -2 20 1 6P78 GLN A 21 ? UNP B1C2R2 ? ? 'expression tag' -1 21 1 6P78 SER A 22 ? UNP B1C2R2 ? ? 'expression tag' 0 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 QUG non-polymer . '2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one' Queuine 'C12 H15 N5 O3' 277.279 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 SMC 'L-peptide linking' n S-METHYLCYSTEINE ? 'C4 H9 N O2 S' 135.185 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6P78 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M CHES, pH 9.5, 30% polyethylene glycol 3,000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-08-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.3776 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.3776 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6P78 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.690 _reflns.d_resolution_low 53.890 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 29732 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 27.400 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 1 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.117 _reflns.pdbx_Rpim_I_all 0.023 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 814983 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.690 1.780 ? ? 116971 ? ? ? 4236 100.000 ? ? ? ? 1.638 ? ? ? ? ? ? ? ? 27.600 ? ? ? 2.700 1.669 0.316 ? 1 1 0.905 ? 5.350 53.890 ? ? 24572 ? ? ? 1093 99.200 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 22.500 ? ? ? 48.200 0.068 0.014 ? 2 1 0.998 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 83.040 _refine.B_iso_mean 32.7345 _refine.B_iso_min 15.580 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6P78 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7260 _refine.ls_d_res_low 28.8030 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27880 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_reflns_R_work 25880 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9400 _refine.ls_percent_reflns_R_free 7.1700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1676 _refine.ls_R_factor_R_free 0.1996 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1651 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.2800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.7260 _refine_hist.d_res_low 28.8030 _refine_hist.number_atoms_solvent 221 _refine_hist.number_atoms_total 2207 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 230 _refine_hist.pdbx_B_iso_mean_ligand 31.75 _refine_hist.pdbx_B_iso_mean_solvent 40.40 _refine_hist.pdbx_number_atoms_protein 1931 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.7263 1.7694 1969 . 142 1827 100.0000 . . . 0.2449 0.0000 0.2174 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.7694 1.8173 1935 . 138 1797 100.0000 . . . 0.2511 0.0000 0.2138 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8173 1.8707 1948 . 140 1808 100.0000 . . . 0.2191 0.0000 0.1844 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8707 1.9311 1952 . 140 1812 100.0000 . . . 0.2122 0.0000 0.1757 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.9311 2.0001 1944 . 139 1805 100.0000 . . . 0.2080 0.0000 0.1722 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.0001 2.0802 1958 . 140 1818 100.0000 . . . 0.2122 0.0000 0.1768 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.0802 2.1748 1953 . 141 1812 100.0000 . . . 0.2030 0.0000 0.1731 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.1748 2.2894 1985 . 143 1842 100.0000 . . . 0.2319 0.0000 0.1660 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.2894 2.4328 1989 . 142 1847 100.0000 . . . 0.2507 0.0000 0.1710 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.4328 2.6205 1997 . 143 1854 100.0000 . . . 0.2068 0.0000 0.1764 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.6205 2.8840 1994 . 144 1850 100.0000 . . . 0.2022 0.0000 0.1747 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.8840 3.3008 2011 . 144 1867 100.0000 . . . 0.2101 0.0000 0.1671 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.3008 4.1567 2063 . 148 1915 100.0000 . . . 0.1906 0.0000 0.1486 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 4.1567 28.8070 2182 . 156 2026 100.0000 . . . 0.1642 0.0000 0.1533 . . . . . . 14 . . . # _struct.entry_id 6P78 _struct.title 'queuine lyase from Clostridium spiroforme bound to SAM and queuine' _struct.pdbx_descriptor 'Queuine lyase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6P78 _struct_keywords.text 'Metal Ion Binding, 4 Iron 4 Sulfur Cluster Binding, Radical SAM enzyme, C-N lyase activity, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 54 ? ASN A 59 ? ASP A 32 ASN A 37 5 ? 6 HELX_P HELX_P2 AA2 ASP A 62 ? ASN A 75 ? ASP A 40 ASN A 53 1 ? 14 HELX_P HELX_P3 AA3 SER A 91 ? LEU A 95 ? SER A 69 LEU A 73 5 ? 5 HELX_P HELX_P4 AA4 PRO A 96 ? LYS A 110 ? PRO A 74 LYS A 88 1 ? 15 HELX_P HELX_P5 AA5 HIS A 120 ? LYS A 125 ? HIS A 98 LYS A 103 5 ? 6 HELX_P HELX_P6 AA6 LYS A 126 ? LYS A 135 ? LYS A 104 LYS A 113 1 ? 10 HELX_P HELX_P7 AA7 ASN A 148 ? VAL A 155 ? ASN A 126 VAL A 133 1 ? 8 HELX_P HELX_P8 AA8 LYS A 164 ? GLU A 170 ? LYS A 142 GLU A 148 1 ? 7 HELX_P HELX_P9 AA9 THR A 185 ? PHE A 200 ? THR A 163 PHE A 178 1 ? 16 HELX_P HELX_P10 AB1 ASP A 218 ? TYR A 229 ? ASP A 196 TYR A 207 1 ? 12 HELX_P HELX_P11 AB2 TYR A 229 ? ASN A 234 ? TYR A 207 ASN A 212 1 ? 6 HELX_P HELX_P12 AB3 ILE A 243 ? GLY A 248 ? ILE A 221 GLY A 226 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 45 SG ? ? ? 1_555 B SF4 . FE1 ? ? A CYS 23 A SF4 501 1_555 ? ? ? ? ? ? ? 2.408 ? metalc2 metalc ? ? A CYS 50 SG ? ? ? 1_555 B SF4 . FE3 ? ? A CYS 28 A SF4 501 1_555 ? ? ? ? ? ? ? 2.299 ? metalc3 metalc ? ? A CYS 53 SG ? ? ? 1_555 B SF4 . FE4 ? ? A CYS 31 A SF4 501 1_555 ? ? ? ? ? ? ? 2.378 ? covale1 covale both ? A PRO 175 C ? ? ? 1_555 A SMC 176 N ? ? A PRO 153 A SMC 154 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale both ? A SMC 176 C ? ? ? 1_555 A LEU 177 N ? ? A SMC 154 A LEU 155 1_555 ? ? ? ? ? ? ? 1.333 ? metalc4 metalc ? ? B SF4 . FE2 ? ? ? 1_555 D SAM . OXT ? ? A SF4 501 A SAM 503 1_555 ? ? ? ? ? ? ? 2.461 ? metalc5 metalc ? ? B SF4 . FE2 ? ? ? 1_555 D SAM . N ? ? A SF4 501 A SAM 503 1_555 ? ? ? ? ? ? ? 2.417 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 26 ? ILE A 29 ? TYR A 4 ILE A 7 AA1 2 ARG A 35 ? LEU A 39 ? ARG A 13 LEU A 17 AA1 3 VAL A 83 ? ILE A 87 ? VAL A 61 ILE A 65 AA1 4 ARG A 114 ? GLU A 118 ? ARG A 92 GLU A 96 AA1 5 GLU A 137 ? GLU A 145 ? GLU A 115 GLU A 123 AA1 6 SER A 174 ? VAL A 179 ? SER A 152 VAL A 157 AA1 7 GLY A 203 ? ILE A 207 ? GLY A 181 ILE A 185 AA1 8 TYR A 238 ? LEU A 241 ? TYR A 216 LEU A 219 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 29 ? N ILE A 7 O ARG A 35 ? O ARG A 13 AA1 2 3 N VAL A 38 ? N VAL A 16 O ILE A 87 ? O ILE A 65 AA1 3 4 N VAL A 86 ? N VAL A 64 O TYR A 116 ? O TYR A 94 AA1 4 5 N ILE A 117 ? N ILE A 95 O LYS A 141 ? O LYS A 119 AA1 5 6 N GLU A 145 ? N GLU A 123 O SMC A 176 ? O SMC A 154 AA1 6 7 N LEU A 177 ? N LEU A 155 O THR A 204 ? O THR A 182 AA1 7 8 N ILE A 205 ? N ILE A 183 O LEU A 241 ? O LEU A 219 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 501 ? 8 'binding site for residue SF4 A 501' AC2 Software A QUG 502 ? 15 'binding site for residue QUG A 502' AC3 Software A SAM 503 ? 20 'binding site for residue SAM A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 CYS A 45 ? CYS A 23 . ? 1_555 ? 2 AC1 8 GLY A 48 ? GLY A 26 . ? 1_555 ? 3 AC1 8 CYS A 50 ? CYS A 28 . ? 1_555 ? 4 AC1 8 CYS A 53 ? CYS A 31 . ? 1_555 ? 5 AC1 8 GLY A 90 ? GLY A 68 . ? 1_555 ? 6 AC1 8 HIS A 120 ? HIS A 98 . ? 1_555 ? 7 AC1 8 LYS A 158 ? LYS A 136 . ? 1_555 ? 8 AC1 8 SAM D . ? SAM A 503 . ? 1_555 ? 9 AC2 15 TYR A 55 ? TYR A 33 . ? 1_555 ? 10 AC2 15 ASP A 58 ? ASP A 36 . ? 1_555 ? 11 AC2 15 ILE A 87 ? ILE A 65 . ? 1_555 ? 12 AC2 15 SER A 89 ? SER A 67 . ? 1_555 ? 13 AC2 15 GLU A 118 ? GLU A 96 . ? 1_555 ? 14 AC2 15 LYS A 141 ? LYS A 119 . ? 1_555 ? 15 AC2 15 ASN A 206 ? ASN A 184 . ? 1_555 ? 16 AC2 15 PRO A 244 ? PRO A 222 . ? 1_555 ? 17 AC2 15 GLY A 250 ? GLY A 228 . ? 1_555 ? 18 AC2 15 ASP A 251 ? ASP A 229 . ? 1_555 ? 19 AC2 15 SAM D . ? SAM A 503 . ? 1_555 ? 20 AC2 15 HOH E . ? HOH A 636 . ? 1_555 ? 21 AC2 15 HOH E . ? HOH A 658 . ? 1_555 ? 22 AC2 15 HOH E . ? HOH A 685 . ? 1_555 ? 23 AC2 15 HOH E . ? HOH A 705 . ? 1_555 ? 24 AC3 20 PHE A 52 ? PHE A 30 . ? 1_555 ? 25 AC3 20 TYR A 55 ? TYR A 33 . ? 1_555 ? 26 AC3 20 GLY A 90 ? GLY A 68 . ? 1_555 ? 27 AC3 20 GLU A 118 ? GLU A 96 . ? 1_555 ? 28 AC3 20 HIS A 120 ? HIS A 98 . ? 1_555 ? 29 AC3 20 GLY A 143 ? GLY A 121 . ? 1_555 ? 30 AC3 20 GLU A 145 ? GLU A 123 . ? 1_555 ? 31 AC3 20 LYS A 158 ? LYS A 136 . ? 1_555 ? 32 AC3 20 SMC A 176 ? SMC A 154 . ? 1_555 ? 33 AC3 20 MET A 178 ? MET A 156 . ? 1_555 ? 34 AC3 20 ASN A 206 ? ASN A 184 . ? 1_555 ? 35 AC3 20 ILE A 207 ? ILE A 185 . ? 1_555 ? 36 AC3 20 TYR A 208 ? TYR A 186 . ? 1_555 ? 37 AC3 20 ARG A 209 ? ARG A 187 . ? 1_555 ? 38 AC3 20 ASN A 211 ? ASN A 189 . ? 1_555 ? 39 AC3 20 SF4 B . ? SF4 A 501 . ? 1_555 ? 40 AC3 20 QUG C . ? QUG A 502 . ? 1_555 ? 41 AC3 20 HOH E . ? HOH A 649 . ? 1_555 ? 42 AC3 20 HOH E . ? HOH A 709 . ? 1_555 ? 43 AC3 20 HOH E . ? HOH A 718 . ? 1_555 ? # _atom_sites.entry_id 6P78 _atom_sites.fract_transf_matrix[1][1] 0.017359 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017359 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006561 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 HIS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 SER 8 -14 ? ? ? A . n A 1 9 SER 9 -13 ? ? ? A . n A 1 10 GLY 10 -12 ? ? ? A . n A 1 11 VAL 11 -11 ? ? ? A . n A 1 12 ASP 12 -10 ? ? ? A . n A 1 13 LEU 13 -9 ? ? ? A . n A 1 14 GLY 14 -8 ? ? ? A . n A 1 15 THR 15 -7 ? ? ? A . n A 1 16 GLU 16 -6 ? ? ? A . n A 1 17 ASN 17 -5 ? ? ? A . n A 1 18 LEU 18 -4 ? ? ? A . n A 1 19 TYR 19 -3 ? ? ? A . n A 1 20 PHE 20 -2 ? ? ? A . n A 1 21 GLN 21 -1 ? ? ? A . n A 1 22 SER 22 0 0 SER SER A . n A 1 23 MET 23 1 1 MET MET A . n A 1 24 GLU 24 2 2 GLU GLU A . n A 1 25 ARG 25 3 3 ARG ARG A . n A 1 26 TYR 26 4 4 TYR TYR A . n A 1 27 SER 27 5 5 SER SER A . n A 1 28 HIS 28 6 6 HIS HIS A . n A 1 29 ILE 29 7 7 ILE ILE A . n A 1 30 LEU 30 8 8 LEU LEU A . n A 1 31 GLU 31 9 9 GLU GLU A . n A 1 32 LYS 32 10 10 LYS LYS A . n A 1 33 ASP 33 11 11 ASP ASP A . n A 1 34 LYS 34 12 12 LYS LYS A . n A 1 35 ARG 35 13 13 ARG ARG A . n A 1 36 GLU 36 14 14 GLU GLU A . n A 1 37 ILE 37 15 15 ILE ILE A . n A 1 38 VAL 38 16 16 VAL VAL A . n A 1 39 LEU 39 17 17 LEU LEU A . n A 1 40 LEU 40 18 18 LEU LEU A . n A 1 41 LYS 41 19 19 LYS LYS A . n A 1 42 SER 42 20 20 SER SER A . n A 1 43 ARG 43 21 21 ARG ARG A . n A 1 44 PRO 44 22 22 PRO PRO A . n A 1 45 CYS 45 23 23 CYS CYS A . n A 1 46 ILE 46 24 24 ILE ILE A . n A 1 47 TRP 47 25 25 TRP TRP A . n A 1 48 GLY 48 26 26 GLY GLY A . n A 1 49 LYS 49 27 27 LYS LYS A . n A 1 50 CYS 50 28 28 CYS CYS A . n A 1 51 SER 51 29 29 SER SER A . n A 1 52 PHE 52 30 30 PHE PHE A . n A 1 53 CYS 53 31 31 CYS CYS A . n A 1 54 ASP 54 32 32 ASP ASP A . n A 1 55 TYR 55 33 33 TYR TYR A . n A 1 56 ILE 56 34 34 ILE ILE A . n A 1 57 GLU 57 35 35 GLU GLU A . n A 1 58 ASP 58 36 36 ASP ASP A . n A 1 59 ASN 59 37 37 ASN ASN A . n A 1 60 ASP 60 38 38 ASP ASP A . n A 1 61 VAL 61 39 39 VAL VAL A . n A 1 62 ASP 62 40 40 ASP ASP A . n A 1 63 GLN 63 41 41 GLN GLN A . n A 1 64 LYS 64 42 42 LYS LYS A . n A 1 65 GLU 65 43 43 GLU GLU A . n A 1 66 ASN 66 44 44 ASN ASN A . n A 1 67 GLN 67 45 45 GLN GLN A . n A 1 68 LYS 68 46 46 LYS LYS A . n A 1 69 ILE 69 47 47 ILE ILE A . n A 1 70 ASN 70 48 48 ASN ASN A . n A 1 71 ASP 71 49 49 ASP ASP A . n A 1 72 GLU 72 50 50 GLU GLU A . n A 1 73 VAL 73 51 51 VAL VAL A . n A 1 74 LEU 74 52 52 LEU LEU A . n A 1 75 ASN 75 53 53 ASN ASN A . n A 1 76 LYS 76 54 54 LYS LYS A . n A 1 77 ILE 77 55 55 ILE ILE A . n A 1 78 THR 78 56 56 THR THR A . n A 1 79 GLY 79 57 57 GLY GLY A . n A 1 80 GLN 80 58 58 GLN GLN A . n A 1 81 TYR 81 59 59 TYR TYR A . n A 1 82 GLY 82 60 60 GLY GLY A . n A 1 83 VAL 83 61 61 VAL VAL A . n A 1 84 LEU 84 62 62 LEU LEU A . n A 1 85 GLU 85 63 63 GLU GLU A . n A 1 86 VAL 86 64 64 VAL VAL A . n A 1 87 ILE 87 65 65 ILE ILE A . n A 1 88 ASN 88 66 66 ASN ASN A . n A 1 89 SER 89 67 67 SER SER A . n A 1 90 GLY 90 68 68 GLY GLY A . n A 1 91 SER 91 69 69 SER SER A . n A 1 92 PHE 92 70 70 PHE PHE A . n A 1 93 PHE 93 71 71 PHE PHE A . n A 1 94 GLU 94 72 72 GLU GLU A . n A 1 95 LEU 95 73 73 LEU LEU A . n A 1 96 PRO 96 74 74 PRO PRO A . n A 1 97 ASP 97 75 75 ASP ASP A . n A 1 98 GLU 98 76 76 GLU GLU A . n A 1 99 THR 99 77 77 THR THR A . n A 1 100 ILE 100 78 78 ILE ILE A . n A 1 101 GLU 101 79 79 GLU GLU A . n A 1 102 ARG 102 80 80 ARG ARG A . n A 1 103 ILE 103 81 81 ILE ILE A . n A 1 104 TYR 104 82 82 TYR TYR A . n A 1 105 LYS 105 83 83 LYS LYS A . n A 1 106 ILE 106 84 84 ILE ILE A . n A 1 107 ILE 107 85 85 ILE ILE A . n A 1 108 GLY 108 86 86 GLY GLY A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 LYS 110 88 88 LYS LYS A . n A 1 111 LYS 111 89 89 LYS LYS A . n A 1 112 ILE 112 90 90 ILE ILE A . n A 1 113 LYS 113 91 91 LYS LYS A . n A 1 114 ARG 114 92 92 ARG ARG A . n A 1 115 LEU 115 93 93 LEU LEU A . n A 1 116 TYR 116 94 94 TYR TYR A . n A 1 117 ILE 117 95 95 ILE ILE A . n A 1 118 GLU 118 96 96 GLU GLU A . n A 1 119 ALA 119 97 97 ALA ALA A . n A 1 120 HIS 120 98 98 HIS HIS A . n A 1 121 TYR 121 99 99 TYR TYR A . n A 1 122 LEU 122 100 100 LEU LEU A . n A 1 123 TYR 123 101 101 TYR TYR A . n A 1 124 LYS 124 102 102 LYS LYS A . n A 1 125 LYS 125 103 103 LYS LYS A . n A 1 126 LYS 126 104 104 LYS LYS A . n A 1 127 ILE 127 105 105 ILE ILE A . n A 1 128 LYS 128 106 106 LYS LYS A . n A 1 129 ALA 129 107 107 ALA ALA A . n A 1 130 LEU 130 108 108 LEU LEU A . n A 1 131 ARG 131 109 109 ARG ARG A . n A 1 132 GLU 132 110 110 GLU GLU A . n A 1 133 LYS 133 111 111 LYS LYS A . n A 1 134 PHE 134 112 112 PHE PHE A . n A 1 135 LYS 135 113 113 LYS LYS A . n A 1 136 ILE 136 114 114 ILE ILE A . n A 1 137 GLU 137 115 115 GLU GLU A . n A 1 138 ILE 138 116 116 ILE ILE A . n A 1 139 ILE 139 117 117 ILE ILE A . n A 1 140 VAL 140 118 118 VAL VAL A . n A 1 141 LYS 141 119 119 LYS LYS A . n A 1 142 THR 142 120 120 THR THR A . n A 1 143 GLY 143 121 121 GLY GLY A . n A 1 144 ILE 144 122 122 ILE ILE A . n A 1 145 GLU 145 123 123 GLU GLU A . n A 1 146 THR 146 124 124 THR THR A . n A 1 147 PHE 147 125 125 PHE PHE A . n A 1 148 ASN 148 126 126 ASN ASN A . n A 1 149 ASP 149 127 127 ASP ASP A . n A 1 150 GLU 150 128 128 GLU GLU A . n A 1 151 MET 151 129 129 MET MET A . n A 1 152 ARG 152 130 130 ARG ARG A . n A 1 153 ASN 153 131 131 ASN ASN A . n A 1 154 ASN 154 132 132 ASN ASN A . n A 1 155 VAL 155 133 133 VAL VAL A . n A 1 156 LEU 156 134 134 LEU LEU A . n A 1 157 ASN 157 135 135 ASN ASN A . n A 1 158 LYS 158 136 136 LYS LYS A . n A 1 159 ASN 159 137 137 ASN ASN A . n A 1 160 ILE 160 138 138 ILE ILE A . n A 1 161 HIS 161 139 139 HIS HIS A . n A 1 162 PHE 162 140 140 PHE PHE A . n A 1 163 ASP 163 141 141 ASP ASP A . n A 1 164 LYS 164 142 142 LYS LYS A . n A 1 165 ILE 165 143 143 ILE ILE A . n A 1 166 GLU 166 144 144 GLU GLU A . n A 1 167 GLU 167 145 145 GLU GLU A . n A 1 168 ILE 168 146 146 ILE ILE A . n A 1 169 LEU 169 147 147 LEU LEU A . n A 1 170 GLU 170 148 148 GLU GLU A . n A 1 171 ASP 171 149 149 ASP ASP A . n A 1 172 PHE 172 150 150 PHE PHE A . n A 1 173 ASP 173 151 151 ASP ASP A . n A 1 174 SER 174 152 152 SER SER A . n A 1 175 PRO 175 153 153 PRO PRO A . n A 1 176 SMC 176 154 154 SMC SMC A . n A 1 177 LEU 177 155 155 LEU LEU A . n A 1 178 MET 178 156 156 MET MET A . n A 1 179 VAL 179 157 157 VAL VAL A . n A 1 180 GLY 180 158 158 GLY GLY A . n A 1 181 ILE 181 159 159 ILE ILE A . n A 1 182 GLN 182 160 160 GLN GLN A . n A 1 183 GLY 183 161 161 GLY GLY A . n A 1 184 GLN 184 162 162 GLN GLN A . n A 1 185 THR 185 163 163 THR THR A . n A 1 186 LYS 186 164 164 LYS LYS A . n A 1 187 GLU 187 165 165 GLU GLU A . n A 1 188 MET 188 166 166 MET MET A . n A 1 189 ILE 189 167 167 ILE ILE A . n A 1 190 ARG 190 168 168 ARG ARG A . n A 1 191 LYS 191 169 169 LYS LYS A . n A 1 192 ASP 192 170 170 ASP ASP A . n A 1 193 ILE 193 171 171 ILE ILE A . n A 1 194 GLU 194 172 172 GLU GLU A . n A 1 195 ILE 195 173 173 ILE ILE A . n A 1 196 LEU 196 174 174 LEU LEU A . n A 1 197 THR 197 175 175 THR THR A . n A 1 198 LYS 198 176 176 LYS LYS A . n A 1 199 TYR 199 177 177 TYR TYR A . n A 1 200 PHE 200 178 178 PHE PHE A . n A 1 201 ASP 201 179 179 ASP ASP A . n A 1 202 HIS 202 180 180 HIS HIS A . n A 1 203 GLY 203 181 181 GLY GLY A . n A 1 204 THR 204 182 182 THR THR A . n A 1 205 ILE 205 183 183 ILE ILE A . n A 1 206 ASN 206 184 184 ASN ASN A . n A 1 207 ILE 207 185 185 ILE ILE A . n A 1 208 TYR 208 186 186 TYR TYR A . n A 1 209 ARG 209 187 187 ARG ARG A . n A 1 210 ASN 210 188 188 ASN ASN A . n A 1 211 ASN 211 189 189 ASN ASN A . n A 1 212 SER 212 190 190 SER SER A . n A 1 213 THR 213 191 191 THR THR A . n A 1 214 PRO 214 192 192 PRO PRO A . n A 1 215 ILE 215 193 193 ILE ILE A . n A 1 216 LYS 216 194 194 LYS LYS A . n A 1 217 ARG 217 195 195 ARG ARG A . n A 1 218 ASP 218 196 196 ASP ASP A . n A 1 219 GLU 219 197 197 GLU GLU A . n A 1 220 GLU 220 198 198 GLU GLU A . n A 1 221 LEU 221 199 199 LEU LEU A . n A 1 222 ILE 222 200 200 ILE ILE A . n A 1 223 LYS 223 201 201 LYS LYS A . n A 1 224 TRP 224 202 202 TRP TRP A . n A 1 225 PHE 225 203 203 PHE PHE A . n A 1 226 ASP 226 204 204 ASP ASP A . n A 1 227 GLU 227 205 205 GLU GLU A . n A 1 228 GLU 228 206 206 GLU GLU A . n A 1 229 TYR 229 207 207 TYR TYR A . n A 1 230 HIS 230 208 208 HIS HIS A . n A 1 231 ASP 231 209 209 ASP ASP A . n A 1 232 LEU 232 210 210 LEU LEU A . n A 1 233 LYS 233 211 211 LYS LYS A . n A 1 234 ASN 234 212 212 ASN ASN A . n A 1 235 ASN 235 213 213 ASN ASN A . n A 1 236 ARG 236 214 214 ARG ARG A . n A 1 237 LYS 237 215 215 LYS LYS A . n A 1 238 TYR 238 216 216 TYR TYR A . n A 1 239 ASP 239 217 217 ASP ASP A . n A 1 240 TYR 240 218 218 TYR TYR A . n A 1 241 LEU 241 219 219 LEU LEU A . n A 1 242 GLY 242 220 220 GLY GLY A . n A 1 243 ILE 243 221 221 ILE ILE A . n A 1 244 PRO 244 222 222 PRO PRO A . n A 1 245 THR 245 223 223 THR THR A . n A 1 246 ASP 246 224 224 ASP ASP A . n A 1 247 PHE 247 225 225 PHE PHE A . n A 1 248 GLY 248 226 226 GLY GLY A . n A 1 249 VAL 249 227 227 VAL VAL A . n A 1 250 GLY 250 228 228 GLY GLY A . n A 1 251 ASP 251 229 229 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 1 501 501 SF4 SF4 A . C 3 QUG 1 502 504 QUG quG A . D 4 SAM 1 503 601 SAM SAM A . E 5 HOH 1 601 125 HOH HOH A . E 5 HOH 2 602 65 HOH HOH A . E 5 HOH 3 603 221 HOH HOH A . E 5 HOH 4 604 164 HOH HOH A . E 5 HOH 5 605 119 HOH HOH A . E 5 HOH 6 606 169 HOH HOH A . E 5 HOH 7 607 108 HOH HOH A . E 5 HOH 8 608 183 HOH HOH A . E 5 HOH 9 609 34 HOH HOH A . E 5 HOH 10 610 78 HOH HOH A . E 5 HOH 11 611 94 HOH HOH A . E 5 HOH 12 612 105 HOH HOH A . E 5 HOH 13 613 242 HOH HOH A . E 5 HOH 14 614 241 HOH HOH A . E 5 HOH 15 615 43 HOH HOH A . E 5 HOH 16 616 58 HOH HOH A . E 5 HOH 17 617 230 HOH HOH A . E 5 HOH 18 618 202 HOH HOH A . E 5 HOH 19 619 13 HOH HOH A . E 5 HOH 20 620 47 HOH HOH A . E 5 HOH 21 621 46 HOH HOH A . E 5 HOH 22 622 236 HOH HOH A . E 5 HOH 23 623 118 HOH HOH A . E 5 HOH 24 624 156 HOH HOH A . E 5 HOH 25 625 41 HOH HOH A . E 5 HOH 26 626 147 HOH HOH A . E 5 HOH 27 627 176 HOH HOH A . E 5 HOH 28 628 26 HOH HOH A . E 5 HOH 29 629 146 HOH HOH A . E 5 HOH 30 630 1 HOH HOH A . E 5 HOH 31 631 7 HOH HOH A . E 5 HOH 32 632 240 HOH HOH A . E 5 HOH 33 633 117 HOH HOH A . E 5 HOH 34 634 128 HOH HOH A . E 5 HOH 35 635 35 HOH HOH A . E 5 HOH 36 636 23 HOH HOH A . E 5 HOH 37 637 189 HOH HOH A . E 5 HOH 38 638 163 HOH HOH A . E 5 HOH 39 639 9 HOH HOH A . E 5 HOH 40 640 246 HOH HOH A . E 5 HOH 41 641 79 HOH HOH A . E 5 HOH 42 642 190 HOH HOH A . E 5 HOH 43 643 10 HOH HOH A . E 5 HOH 44 644 4 HOH HOH A . E 5 HOH 45 645 68 HOH HOH A . E 5 HOH 46 646 121 HOH HOH A . E 5 HOH 47 647 143 HOH HOH A . E 5 HOH 48 648 57 HOH HOH A . E 5 HOH 49 649 53 HOH HOH A . E 5 HOH 50 650 100 HOH HOH A . E 5 HOH 51 651 113 HOH HOH A . E 5 HOH 52 652 203 HOH HOH A . E 5 HOH 53 653 97 HOH HOH A . E 5 HOH 54 654 15 HOH HOH A . E 5 HOH 55 655 218 HOH HOH A . E 5 HOH 56 656 153 HOH HOH A . E 5 HOH 57 657 130 HOH HOH A . E 5 HOH 58 658 201 HOH HOH A . E 5 HOH 59 659 20 HOH HOH A . E 5 HOH 60 660 55 HOH HOH A . E 5 HOH 61 661 84 HOH HOH A . E 5 HOH 62 662 69 HOH HOH A . E 5 HOH 63 663 132 HOH HOH A . E 5 HOH 64 664 19 HOH HOH A . E 5 HOH 65 665 92 HOH HOH A . E 5 HOH 66 666 6 HOH HOH A . E 5 HOH 67 667 2 HOH HOH A . E 5 HOH 68 668 98 HOH HOH A . E 5 HOH 69 669 63 HOH HOH A . E 5 HOH 70 670 33 HOH HOH A . E 5 HOH 71 671 71 HOH HOH A . E 5 HOH 72 672 37 HOH HOH A . E 5 HOH 73 673 112 HOH HOH A . E 5 HOH 74 674 142 HOH HOH A . E 5 HOH 75 675 75 HOH HOH A . E 5 HOH 76 676 181 HOH HOH A . E 5 HOH 77 677 51 HOH HOH A . E 5 HOH 78 678 150 HOH HOH A . E 5 HOH 79 679 186 HOH HOH A . E 5 HOH 80 680 56 HOH HOH A . E 5 HOH 81 681 106 HOH HOH A . E 5 HOH 82 682 14 HOH HOH A . E 5 HOH 83 683 80 HOH HOH A . E 5 HOH 84 684 155 HOH HOH A . E 5 HOH 85 685 209 HOH HOH A . E 5 HOH 86 686 127 HOH HOH A . E 5 HOH 87 687 86 HOH HOH A . E 5 HOH 88 688 30 HOH HOH A . E 5 HOH 89 689 21 HOH HOH A . E 5 HOH 90 690 136 HOH HOH A . E 5 HOH 91 691 48 HOH HOH A . E 5 HOH 92 692 167 HOH HOH A . E 5 HOH 93 693 157 HOH HOH A . E 5 HOH 94 694 228 HOH HOH A . E 5 HOH 95 695 85 HOH HOH A . E 5 HOH 96 696 40 HOH HOH A . E 5 HOH 97 697 166 HOH HOH A . E 5 HOH 98 698 3 HOH HOH A . E 5 HOH 99 699 96 HOH HOH A . E 5 HOH 100 700 139 HOH HOH A . E 5 HOH 101 701 39 HOH HOH A . E 5 HOH 102 702 42 HOH HOH A . E 5 HOH 103 703 101 HOH HOH A . E 5 HOH 104 704 8 HOH HOH A . E 5 HOH 105 705 107 HOH HOH A . E 5 HOH 106 706 111 HOH HOH A . E 5 HOH 107 707 27 HOH HOH A . E 5 HOH 108 708 16 HOH HOH A . E 5 HOH 109 709 73 HOH HOH A . E 5 HOH 110 710 231 HOH HOH A . E 5 HOH 111 711 64 HOH HOH A . E 5 HOH 112 712 134 HOH HOH A . E 5 HOH 113 713 60 HOH HOH A . E 5 HOH 114 714 22 HOH HOH A . E 5 HOH 115 715 24 HOH HOH A . E 5 HOH 116 716 244 HOH HOH A . E 5 HOH 117 717 144 HOH HOH A . E 5 HOH 118 718 36 HOH HOH A . E 5 HOH 119 719 70 HOH HOH A . E 5 HOH 120 720 18 HOH HOH A . E 5 HOH 121 721 5 HOH HOH A . E 5 HOH 122 722 151 HOH HOH A . E 5 HOH 123 723 44 HOH HOH A . E 5 HOH 124 724 87 HOH HOH A . E 5 HOH 125 725 123 HOH HOH A . E 5 HOH 126 726 12 HOH HOH A . E 5 HOH 127 727 77 HOH HOH A . E 5 HOH 128 728 32 HOH HOH A . E 5 HOH 129 729 49 HOH HOH A . E 5 HOH 130 730 54 HOH HOH A . E 5 HOH 131 731 122 HOH HOH A . E 5 HOH 132 732 25 HOH HOH A . E 5 HOH 133 733 45 HOH HOH A . E 5 HOH 134 734 129 HOH HOH A . E 5 HOH 135 735 74 HOH HOH A . E 5 HOH 136 736 11 HOH HOH A . E 5 HOH 137 737 138 HOH HOH A . E 5 HOH 138 738 141 HOH HOH A . E 5 HOH 139 739 115 HOH HOH A . E 5 HOH 140 740 223 HOH HOH A . E 5 HOH 141 741 110 HOH HOH A . E 5 HOH 142 742 104 HOH HOH A . E 5 HOH 143 743 90 HOH HOH A . E 5 HOH 144 744 184 HOH HOH A . E 5 HOH 145 745 50 HOH HOH A . E 5 HOH 146 746 82 HOH HOH A . E 5 HOH 147 747 52 HOH HOH A . E 5 HOH 148 748 67 HOH HOH A . E 5 HOH 149 749 212 HOH HOH A . E 5 HOH 150 750 116 HOH HOH A . E 5 HOH 151 751 179 HOH HOH A . E 5 HOH 152 752 59 HOH HOH A . E 5 HOH 153 753 91 HOH HOH A . E 5 HOH 154 754 103 HOH HOH A . E 5 HOH 155 755 124 HOH HOH A . E 5 HOH 156 756 220 HOH HOH A . E 5 HOH 157 757 204 HOH HOH A . E 5 HOH 158 758 66 HOH HOH A . E 5 HOH 159 759 217 HOH HOH A . E 5 HOH 160 760 95 HOH HOH A . E 5 HOH 161 761 224 HOH HOH A . E 5 HOH 162 762 109 HOH HOH A . E 5 HOH 163 763 28 HOH HOH A . E 5 HOH 164 764 222 HOH HOH A . E 5 HOH 165 765 191 HOH HOH A . E 5 HOH 166 766 193 HOH HOH A . E 5 HOH 167 767 114 HOH HOH A . E 5 HOH 168 768 29 HOH HOH A . E 5 HOH 169 769 145 HOH HOH A . E 5 HOH 170 770 215 HOH HOH A . E 5 HOH 171 771 195 HOH HOH A . E 5 HOH 172 772 149 HOH HOH A . E 5 HOH 173 773 88 HOH HOH A . E 5 HOH 174 774 161 HOH HOH A . E 5 HOH 175 775 237 HOH HOH A . E 5 HOH 176 776 137 HOH HOH A . E 5 HOH 177 777 76 HOH HOH A . E 5 HOH 178 778 31 HOH HOH A . E 5 HOH 179 779 174 HOH HOH A . E 5 HOH 180 780 177 HOH HOH A . E 5 HOH 181 781 89 HOH HOH A . E 5 HOH 182 782 211 HOH HOH A . E 5 HOH 183 783 62 HOH HOH A . E 5 HOH 184 784 135 HOH HOH A . E 5 HOH 185 785 154 HOH HOH A . E 5 HOH 186 786 72 HOH HOH A . E 5 HOH 187 787 83 HOH HOH A . E 5 HOH 188 788 170 HOH HOH A . E 5 HOH 189 789 38 HOH HOH A . E 5 HOH 190 790 197 HOH HOH A . E 5 HOH 191 791 233 HOH HOH A . E 5 HOH 192 792 160 HOH HOH A . E 5 HOH 193 793 152 HOH HOH A . E 5 HOH 194 794 199 HOH HOH A . E 5 HOH 195 795 81 HOH HOH A . E 5 HOH 196 796 126 HOH HOH A . E 5 HOH 197 797 185 HOH HOH A . E 5 HOH 198 798 102 HOH HOH A . E 5 HOH 199 799 158 HOH HOH A . E 5 HOH 200 800 175 HOH HOH A . E 5 HOH 201 801 131 HOH HOH A . E 5 HOH 202 802 17 HOH HOH A . E 5 HOH 203 803 178 HOH HOH A . E 5 HOH 204 804 148 HOH HOH A . E 5 HOH 205 805 99 HOH HOH A . E 5 HOH 206 806 172 HOH HOH A . E 5 HOH 207 807 61 HOH HOH A . E 5 HOH 208 808 120 HOH HOH A . E 5 HOH 209 809 226 HOH HOH A . E 5 HOH 210 810 229 HOH HOH A . E 5 HOH 211 811 214 HOH HOH A . E 5 HOH 212 812 93 HOH HOH A . E 5 HOH 213 813 180 HOH HOH A . E 5 HOH 214 814 208 HOH HOH A . E 5 HOH 215 815 162 HOH HOH A . E 5 HOH 216 816 159 HOH HOH A . E 5 HOH 217 817 187 HOH HOH A . E 5 HOH 218 818 133 HOH HOH A . E 5 HOH 219 819 207 HOH HOH A . E 5 HOH 220 820 173 HOH HOH A . E 5 HOH 221 821 168 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id SMC _pdbx_struct_mod_residue.label_seq_id 176 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id SMC _pdbx_struct_mod_residue.auth_seq_id 154 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 45 ? A CYS 23 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S2 ? B SF4 . ? A SF4 501 ? 1_555 125.1 ? 2 SG ? A CYS 45 ? A CYS 23 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 115.2 ? 3 S2 ? B SF4 . ? A SF4 501 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 107.3 ? 4 SG ? A CYS 45 ? A CYS 23 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 97.1 ? 5 S2 ? B SF4 . ? A SF4 501 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 102.9 ? 6 S3 ? B SF4 . ? A SF4 501 ? 1_555 FE1 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 106.1 ? 7 SG ? A CYS 50 ? A CYS 28 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S1 ? B SF4 . ? A SF4 501 ? 1_555 108.9 ? 8 SG ? A CYS 50 ? A CYS 28 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S2 ? B SF4 . ? A SF4 501 ? 1_555 115.7 ? 9 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S2 ? B SF4 . ? A SF4 501 ? 1_555 108.7 ? 10 SG ? A CYS 50 ? A CYS 28 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 113.2 ? 11 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 105.9 ? 12 S2 ? B SF4 . ? A SF4 501 ? 1_555 FE3 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 103.9 ? 13 SG ? A CYS 53 ? A CYS 31 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S1 ? B SF4 . ? A SF4 501 ? 1_555 108.4 ? 14 SG ? A CYS 53 ? A CYS 31 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S2 ? B SF4 . ? A SF4 501 ? 1_555 106.1 ? 15 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S2 ? B SF4 . ? A SF4 501 ? 1_555 109.1 ? 16 SG ? A CYS 53 ? A CYS 31 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 123.9 ? 17 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 102.3 ? 18 S2 ? B SF4 . ? A SF4 501 ? 1_555 FE4 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 106.5 ? 19 OXT ? D SAM . ? A SAM 503 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S1 ? B SF4 . ? A SF4 501 ? 1_555 92.9 ? 20 OXT ? D SAM . ? A SAM 503 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 155.8 ? 21 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S3 ? B SF4 . ? A SF4 501 ? 1_555 100.4 ? 22 OXT ? D SAM . ? A SAM 503 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 90.7 ? 23 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 105.0 ? 24 S3 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 S4 ? B SF4 . ? A SF4 501 ? 1_555 105.0 ? 25 OXT ? D SAM . ? A SAM 503 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 N ? D SAM . ? A SAM 503 ? 1_555 68.4 ? 26 S1 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 N ? D SAM . ? A SAM 503 ? 1_555 152.6 ? 27 S3 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 N ? D SAM . ? A SAM 503 ? 1_555 91.5 ? 28 S4 ? B SF4 . ? A SF4 501 ? 1_555 FE2 ? B SF4 . ? A SF4 501 ? 1_555 N ? D SAM . ? A SAM 503 ? 1_555 95.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-18 2 'Structure model' 1 1 2019-10-02 3 'Structure model' 1 2 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 8.6518 34.0889 80.2887 0.1794 ? -0.0386 ? -0.0125 ? 0.1760 ? 0.0078 ? 0.1794 ? 3.5477 ? -1.8179 ? -0.5805 ? 6.9295 ? -0.1192 ? 7.3811 ? -0.0892 ? -0.0462 ? -0.2539 ? 0.4354 ? -0.1197 ? 0.2856 ? 0.1966 ? -0.6270 ? 0.2254 ? 2 'X-RAY DIFFRACTION' ? refined 5.2724 51.4466 69.1309 0.3595 ? 0.0488 ? -0.0262 ? 0.1837 ? -0.0121 ? 0.1848 ? 1.3263 ? -0.5962 ? 0.8028 ? 2.7104 ? -0.4862 ? 5.0695 ? -0.0691 ? -0.0369 ? 0.2093 ? 0.1752 ? 0.0388 ? -0.0229 ? -0.8041 ? -0.3201 ? 0.0162 ? 3 'X-RAY DIFFRACTION' ? refined 8.0579 50.3263 83.3527 0.7485 ? 0.0469 ? -0.0072 ? 0.3188 ? -0.0345 ? 0.2585 ? 0.5810 ? -0.1284 ? -0.0549 ? 7.5070 ? 1.2483 ? 0.3107 ? -0.4359 ? -0.4868 ? 0.2331 ? 0.8137 ? 0.3280 ? 0.0057 ? -1.6421 ? -0.6042 ? 0.2086 ? 4 'X-RAY DIFFRACTION' ? refined 14.6597 41.3875 78.3621 0.2176 ? -0.0154 ? -0.0263 ? 0.1336 ? 0.0038 ? 0.1296 ? 2.9644 ? -0.6445 ? 0.6259 ? 4.6050 ? -0.3465 ? 3.3191 ? -0.0308 ? -0.2360 ? 0.1210 ? 0.0547 ? -0.0286 ? -0.0852 ? -0.4181 ? 0.0025 ? 0.0281 ? 5 'X-RAY DIFFRACTION' ? refined 21.6190 46.1988 84.1366 0.5940 ? -0.1501 ? -0.1891 ? 0.3301 ? -0.0041 ? 0.3747 ? 6.3384 ? -2.4002 ? -1.6700 ? 6.4299 ? 1.2307 ? 0.5247 ? -0.2277 ? -0.4162 ? 0.7738 ? 0.4569 ? 0.1475 ? -0.8850 ? -0.9266 ? 0.8407 ? 0.0077 ? 6 'X-RAY DIFFRACTION' ? refined 19.0257 38.0163 75.7565 0.1964 ? -0.0514 ? -0.0292 ? 0.1392 ? 0.0417 ? 0.1777 ? 2.6417 ? 0.0637 ? 0.7062 ? 3.7993 ? -0.5855 ? 6.3027 ? 0.0798 ? -0.2371 ? -0.2160 ? 0.2174 ? -0.0411 ? -0.0100 ? 0.0174 ? 0.1250 ? -0.0888 ? 7 'X-RAY DIFFRACTION' ? refined 23.0120 47.5288 67.7266 0.2816 ? -0.0767 ? -0.0456 ? 0.1708 ? 0.0297 ? 0.2095 ? 5.6477 ? -2.2913 ? 3.8134 ? 4.5646 ? -3.5288 ? 7.2769 ? -0.0781 ? 0.2292 ? 0.2075 ? 0.0760 ? -0.2351 ? -0.3666 ? -0.4191 ? 0.6956 ? 0.3909 ? 8 'X-RAY DIFFRACTION' ? refined 12.4781 43.0389 58.1037 0.2214 ? -0.0210 ? -0.0079 ? 0.0661 ? -0.0064 ? 0.1711 ? 5.1634 ? -1.7015 ? 2.3775 ? 2.1630 ? -1.3320 ? 3.7832 ? 0.1100 ? 0.2466 ? 0.0440 ? -0.2341 ? -0.1343 ? -0.0761 ? 0.0286 ? 0.0751 ? 0.0140 ? 9 'X-RAY DIFFRACTION' ? refined 7.9952 35.1549 56.2183 0.2489 ? -0.0182 ? -0.0162 ? 0.0804 ? 0.0061 ? 0.1704 ? 7.4164 ? -0.5473 ? 1.2577 ? 0.8486 ? -0.4053 ? 2.9101 ? -0.0669 ? 0.2500 ? -0.0978 ? 0.0052 ? 0.0331 ? 0.0106 ? 0.1587 ? -0.0574 ? 0.0409 ? 10 'X-RAY DIFFRACTION' ? refined 1.2041 31.9849 64.6332 0.2650 ? -0.0557 ? -0.0138 ? 0.1920 ? 0.0105 ? 0.2195 ? 4.7473 ? -1.5117 ? -0.2866 ? 1.6470 ? -0.0545 ? 3.2232 ? -0.0728 ? -0.4017 ? -0.2261 ? 0.1950 ? 0.1104 ? 0.0738 ? 0.3401 ? -0.3619 ? -0.0521 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 0 ? ? A 17 ? ;chain 'A' and (resid 0 through 17 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 18 ? ? A 32 ? ;chain 'A' and (resid 18 through 32 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 33 ? ? A 54 ? ;chain 'A' and (resid 33 through 54 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? A 55 ? ? A 74 ? ;chain 'A' and (resid 55 through 74 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? A 75 ? ? A 87 ? ;chain 'A' and (resid 75 through 87 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? A 88 ? ? A 98 ? ;chain 'A' and (resid 88 through 98 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? A 99 ? ? A 112 ? ;chain 'A' and (resid 99 through 112 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? A 113 ? ? A 147 ? ;chain 'A' and (resid 113 through 147 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? A 148 ? ? A 177 ? ;chain 'A' and (resid 148 through 177 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? A 178 ? ? A 229 ? ;chain 'A' and (resid 178 through 229 ) ; # _phasing.method SAD # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3260: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.1 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? 1.14-3260 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 10 ? ? 61.09 -122.49 2 1 TRP A 25 ? ? -92.13 -68.58 3 1 ASN A 66 ? ? -160.83 31.70 4 1 LYS A 113 ? ? 69.46 -38.38 5 1 GLU A 123 ? ? 67.93 -53.35 6 1 ASN A 189 ? ? -144.47 -151.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A HIS -20 ? A HIS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A SER -14 ? A SER 8 9 1 Y 1 A SER -13 ? A SER 9 10 1 Y 1 A GLY -12 ? A GLY 10 11 1 Y 1 A VAL -11 ? A VAL 11 12 1 Y 1 A ASP -10 ? A ASP 12 13 1 Y 1 A LEU -9 ? A LEU 13 14 1 Y 1 A GLY -8 ? A GLY 14 15 1 Y 1 A THR -7 ? A THR 15 16 1 Y 1 A GLU -6 ? A GLU 16 17 1 Y 1 A ASN -5 ? A ASN 17 18 1 Y 1 A LEU -4 ? A LEU 18 19 1 Y 1 A TYR -3 ? A TYR 19 20 1 Y 1 A PHE -2 ? A PHE 20 21 1 Y 1 A GLN -1 ? A GLN 21 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' AI133329 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' U54-GM093342 2 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 QUG ? ? QUG ? ? 'SUBJECT OF INVESTIGATION' ? 2 SAM ? ? SAM ? ? 'SUBJECT OF INVESTIGATION' ? 3 SF4 ? ? SF4 ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IRON/SULFUR CLUSTER' SF4 3 '2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one' QUG 4 S-ADENOSYLMETHIONINE SAM 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #