HEADER TRANSFERASE 10-JUN-19 6P9L TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS KASA IN COMPLEX WITH TITLE 2 JFX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-KETOACYL-ACP SYNTHASE 1,KAS 1; COMPND 5 EC: 2.3.1.41; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: KASA, RV2245, MTCY427.26; SOURCE 7 EXPRESSION_SYSTEM: MYCOLICIBACTERIUM SMEGMATIS MC2 155; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 246196 KEYWDS BETA KETOACYL SYNTHASE I, LIPID SYNTHESIS, FATTY ACID BIOSYNTHESIS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.C.CAPODAGLI,M.B.NEIDITCH REVDAT 3 11-OCT-23 6P9L 1 REMARK REVDAT 2 03-JUN-20 6P9L 1 JRNL REVDAT 1 01-APR-20 6P9L 0 JRNL AUTH D.INOYAMA,D.AWASTHI,G.C.CAPODAGLI,K.TSOTETSI,P.SUKHEJA, JRNL AUTH 2 M.ZIMMERMAN,S.G.LI,R.JADHAV,R.RUSSO,X.WANG,C.GRADY, JRNL AUTH 3 T.RICHMANN,R.SHRESTHA,L.LI,Y.M.AHN,H.P.HO LIANG,M.MINA, JRNL AUTH 4 S.PARK,D.S.PERLIN,N.CONNELL,V.DARTOIS,D.ALLAND,M.B.NEIDITCH, JRNL AUTH 5 P.KUMAR,J.S.FREUNDLICH JRNL TITL A PRECLINICAL CANDIDATE TARGETING MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 KASA. JRNL REF CELL CHEM BIOL V. 27 560 2020 JRNL REFN ESSN 2451-9456 JRNL PMID 32197094 JRNL DOI 10.1016/J.CHEMBIOL.2020.02.007 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 23255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.620 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5243 - 5.5503 1.00 1636 159 0.1477 0.1867 REMARK 3 2 5.5503 - 4.4073 1.00 1571 153 0.1441 0.1562 REMARK 3 3 4.4073 - 3.8507 1.00 1528 143 0.1436 0.1658 REMARK 3 4 3.8507 - 3.4989 1.00 1522 147 0.1671 0.2120 REMARK 3 5 3.4989 - 3.2482 1.00 1522 141 0.1946 0.2531 REMARK 3 6 3.2482 - 3.0568 1.00 1511 146 0.2156 0.2338 REMARK 3 7 3.0568 - 2.9037 1.00 1511 139 0.2106 0.3076 REMARK 3 8 2.9037 - 2.7774 1.00 1492 142 0.2041 0.1965 REMARK 3 9 2.7774 - 2.6705 1.00 1510 141 0.1965 0.2173 REMARK 3 10 2.6705 - 2.5783 1.00 1502 143 0.1989 0.2289 REMARK 3 11 2.5783 - 2.4977 1.00 1508 135 0.2068 0.2364 REMARK 3 12 2.4977 - 2.4264 1.00 1491 137 0.2160 0.2941 REMARK 3 13 2.4264 - 2.3625 1.00 1496 141 0.2221 0.2617 REMARK 3 14 2.3625 - 2.3049 0.96 1450 138 0.2269 0.2935 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0796 -16.6596 -14.3099 REMARK 3 T TENSOR REMARK 3 T11: 0.5234 T22: 0.4653 REMARK 3 T33: 0.4358 T12: -0.0555 REMARK 3 T13: -0.0302 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 0.6479 L22: 2.4838 REMARK 3 L33: 0.6462 L12: -0.5655 REMARK 3 L13: -0.1861 L23: -0.7828 REMARK 3 S TENSOR REMARK 3 S11: 0.2955 S12: 0.2318 S13: -0.1712 REMARK 3 S21: 0.0647 S22: -0.3209 S23: 0.0173 REMARK 3 S31: 0.3416 S32: 0.3128 S33: 0.0189 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9317 -10.9105 -29.9542 REMARK 3 T TENSOR REMARK 3 T11: 0.5764 T22: 0.4464 REMARK 3 T33: 0.4399 T12: 0.1126 REMARK 3 T13: -0.0379 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.5161 L22: 1.8574 REMARK 3 L33: 0.4708 L12: 0.1907 REMARK 3 L13: 0.0325 L23: -0.8043 REMARK 3 S TENSOR REMARK 3 S11: 0.1538 S12: 0.0450 S13: 0.1140 REMARK 3 S21: -0.3219 S22: -0.4230 S23: -0.0849 REMARK 3 S31: 0.3856 S32: 0.2937 S33: -0.1104 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6812 -6.3596 -11.7416 REMARK 3 T TENSOR REMARK 3 T11: 0.5107 T22: 0.3099 REMARK 3 T33: 0.3711 T12: -0.1032 REMARK 3 T13: 0.0713 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 0.4869 L22: 3.2507 REMARK 3 L33: 1.0270 L12: 0.2838 REMARK 3 L13: -0.0174 L23: -1.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.3291 S12: -0.0354 S13: -0.0359 REMARK 3 S21: 0.4062 S22: -0.2747 S23: 0.3264 REMARK 3 S31: -0.1636 S32: 0.1346 S33: 0.0396 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 330 THROUGH 416 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8725 -11.5404 -2.7059 REMARK 3 T TENSOR REMARK 3 T11: 0.7752 T22: 0.4051 REMARK 3 T33: 0.4944 T12: -0.2179 REMARK 3 T13: 0.1675 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 0.8035 L22: 1.3278 REMARK 3 L33: 0.8452 L12: 0.2049 REMARK 3 L13: 0.5370 L23: -0.7500 REMARK 3 S TENSOR REMARK 3 S11: 0.3497 S12: -0.2076 S13: 0.0411 REMARK 3 S21: 0.7056 S22: -0.2549 S23: 0.4626 REMARK 3 S31: -0.1806 S32: 0.1064 S33: 0.0689 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242166. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : 0.97946 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23296 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5W2O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM NACL, 6% ISOPROPANOL, 1MM TRIS(2 REMARK 280 -CARBOXYETHYL)PHOSPHONE HYDROCHLORIDE (TCEP HCL), PH 9.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.79133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.58267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.58267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.79133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -48.79133 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 651 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 116 -58.42 -146.89 REMARK 500 SER A 169 48.42 -156.56 REMARK 500 ALA A 170 -123.05 50.01 REMARK 500 ASP A 233 32.10 -87.78 REMARK 500 ALA A 314 15.35 80.45 REMARK 500 ILE A 347 -108.75 52.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 309 O REMARK 620 2 ASN A 309 OD1 81.6 REMARK 620 3 ALA A 310 O 82.1 85.4 REMARK 620 4 GLU A 354 OE2 170.0 93.7 88.8 REMARK 620 5 ASN A 399 OD1 84.3 85.6 164.6 104.2 REMARK 620 6 ASN A 400 O 93.8 170.5 102.1 92.1 85.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JFX A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 508 DBREF 6P9L A 3 416 UNP P9WQD9 FAB1_MYCTU 3 416 SEQRES 1 A 414 GLN PRO SER THR ALA ASN GLY GLY PHE PRO SER VAL VAL SEQRES 2 A 414 VAL THR ALA VAL THR ALA THR THR SER ILE SER PRO ASP SEQRES 3 A 414 ILE GLU SER THR TRP LYS GLY LEU LEU ALA GLY GLU SER SEQRES 4 A 414 GLY ILE HIS ALA LEU GLU ASP GLU PHE VAL THR LYS TRP SEQRES 5 A 414 ASP LEU ALA VAL LYS ILE GLY GLY HIS LEU LYS ASP PRO SEQRES 6 A 414 VAL ASP SER HIS MET GLY ARG LEU ASP MET ARG ARG MET SEQRES 7 A 414 SER TYR VAL GLN ARG MET GLY LYS LEU LEU GLY GLY GLN SEQRES 8 A 414 LEU TRP GLU SER ALA GLY SER PRO GLU VAL ASP PRO ASP SEQRES 9 A 414 ARG PHE ALA VAL VAL VAL GLY THR GLY LEU GLY GLY ALA SEQRES 10 A 414 GLU ARG ILE VAL GLU SER TYR ASP LEU MET ASN ALA GLY SEQRES 11 A 414 GLY PRO ARG LYS VAL SER PRO LEU ALA VAL GLN MET ILE SEQRES 12 A 414 MET PRO ASN GLY ALA ALA ALA VAL ILE GLY LEU GLN LEU SEQRES 13 A 414 GLY ALA ARG ALA GLY VAL MET THR PRO VAL SER ALA CYS SEQRES 14 A 414 SER SER GLY SER GLU ALA ILE ALA HIS ALA TRP ARG GLN SEQRES 15 A 414 ILE VAL MET GLY ASP ALA ASP VAL ALA VAL CYS GLY GLY SEQRES 16 A 414 VAL GLU GLY PRO ILE GLU ALA LEU PRO ILE ALA ALA PHE SEQRES 17 A 414 SER MET MET ARG ALA MET SER THR ARG ASN ASP GLU PRO SEQRES 18 A 414 GLU ARG ALA SER ARG PRO PHE ASP LYS ASP ARG ASP GLY SEQRES 19 A 414 PHE VAL PHE GLY GLU ALA GLY ALA LEU MET LEU ILE GLU SEQRES 20 A 414 THR GLU GLU HIS ALA LYS ALA ARG GLY ALA LYS PRO LEU SEQRES 21 A 414 ALA ARG LEU LEU GLY ALA GLY ILE THR SER ASP ALA PHE SEQRES 22 A 414 HIS MET VAL ALA PRO ALA ALA ASP GLY VAL ARG ALA GLY SEQRES 23 A 414 ARG ALA MET THR ARG SER LEU GLU LEU ALA GLY LEU SER SEQRES 24 A 414 PRO ALA ASP ILE ASP HIS VAL ASN ALA HIS GLY THR ALA SEQRES 25 A 414 THR PRO ILE GLY ASP ALA ALA GLU ALA ASN ALA ILE ARG SEQRES 26 A 414 VAL ALA GLY CYS ASP GLN ALA ALA VAL TYR ALA PRO LYS SEQRES 27 A 414 SER ALA LEU GLY HIS SER ILE GLY ALA VAL GLY ALA LEU SEQRES 28 A 414 GLU SER VAL LEU THR VAL LEU THR LEU ARG ASP GLY VAL SEQRES 29 A 414 ILE PRO PRO THR LEU ASN TYR GLU THR PRO ASP PRO GLU SEQRES 30 A 414 ILE ASP LEU ASP VAL VAL ALA GLY GLU PRO ARG TYR GLY SEQRES 31 A 414 ASP TYR ARG TYR ALA VAL ASN ASN SER PHE GLY PHE GLY SEQRES 32 A 414 GLY HIS ASN VAL ALA LEU ALA PHE GLY ARG TYR HET JFX A 501 19 HET NA A 502 1 HET GOL A 503 6 HET IPA A 504 4 HET IPA A 505 4 HET IPA A 506 4 HET IPA A 507 4 HET IPA A 508 4 HETNAM JFX 4-FLUORO-N-(3-METHYL-1H-INDAZOL-5-YL)BUTANE-1- HETNAM 2 JFX SULFONAMIDE HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL FORMUL 2 JFX C12 H16 F N3 O2 S FORMUL 3 NA NA 1+ FORMUL 4 GOL C3 H8 O3 FORMUL 5 IPA 5(C3 H8 O) FORMUL 10 HOH *77(H2 O) HELIX 1 AA1 ASP A 28 ALA A 38 1 11 HELIX 2 AA2 ASP A 48 ASP A 55 1 8 HELIX 3 AA3 PRO A 67 MET A 72 5 6 HELIX 4 AA4 GLY A 73 MET A 80 1 8 HELIX 5 AA5 SER A 81 ALA A 98 1 18 HELIX 6 AA6 ASP A 104 ASP A 106 5 3 HELIX 7 AA7 ALA A 119 GLY A 133 1 15 HELIX 8 AA8 PRO A 134 VAL A 137 5 4 HELIX 9 AA9 LEU A 140 MET A 146 1 7 HELIX 10 AB1 ASN A 148 GLY A 159 1 12 HELIX 11 AB2 SER A 169 CYS A 171 5 3 HELIX 12 AB3 SER A 172 MET A 187 1 16 HELIX 13 AB4 GLU A 203 MET A 212 1 10 HELIX 14 AB5 GLU A 222 ALA A 226 5 5 HELIX 15 AB6 GLU A 251 ALA A 256 1 6 HELIX 16 AB7 GLY A 284 GLY A 299 1 16 HELIX 17 AB8 SER A 301 ILE A 305 5 5 HELIX 18 AB9 THR A 315 GLY A 330 1 16 HELIX 19 AC1 PRO A 339 GLY A 344 1 6 HELIX 20 AC2 ALA A 349 GLY A 365 1 17 SHEET 1 AA111 VAL A 164 MET A 165 0 SHEET 2 AA111 PHE A 108 THR A 114 1 N VAL A 110 O MET A 165 SHEET 3 AA111 VAL A 192 VAL A 198 1 O GLY A 196 N GLY A 113 SHEET 4 AA111 ALA A 242 THR A 250 -1 O ILE A 248 N ALA A 193 SHEET 5 AA111 VAL A 14 THR A 23 -1 N ALA A 18 O LEU A 247 SHEET 6 AA111 ALA A 263 SER A 272 -1 O ALA A 263 N VAL A 16 SHEET 7 AA111 HIS A 407 GLY A 414 -1 O GLY A 414 N ARG A 264 SHEET 8 AA111 TYR A 396 GLY A 403 -1 N ALA A 397 O PHE A 413 SHEET 9 AA111 HIS A 307 ASN A 309 1 N ASN A 309 O ASN A 400 SHEET 10 AA111 ALA A 335 TYR A 337 1 O ALA A 335 N VAL A 308 SHEET 11 AA111 ASP A 383 VAL A 384 1 O ASP A 383 N VAL A 336 SHEET 1 AA2 2 HIS A 44 ALA A 45 0 SHEET 2 AA2 2 ILE A 60 GLY A 61 -1 O GLY A 61 N HIS A 44 SHEET 1 AA3 2 VAL A 366 ILE A 367 0 SHEET 2 AA3 2 ARG A 390 TYR A 391 -1 O ARG A 390 N ILE A 367 LINK O ASN A 309 NA NA A 502 1555 1555 2.53 LINK OD1 ASN A 309 NA NA A 502 1555 1555 2.46 LINK O ALA A 310 NA NA A 502 1555 1555 2.61 LINK OE2 GLU A 354 NA NA A 502 1555 1555 2.31 LINK OD1 ASN A 399 NA NA A 502 1555 1555 2.37 LINK O ASN A 400 NA NA A 502 1555 1555 2.87 SITE 1 AC1 13 GLY A 117 GLU A 120 GLU A 199 GLY A 200 SITE 2 AC1 13 PRO A 201 ILE A 202 GLU A 203 PRO A 206 SITE 3 AC1 13 PHE A 239 GLY A 240 GLU A 241 ILE A 347 SITE 4 AC1 13 IPA A 506 SITE 1 AC2 6 ASN A 309 ALA A 310 HIS A 311 GLU A 354 SITE 2 AC2 6 ASN A 399 ASN A 400 SITE 1 AC3 5 ALA A 18 VAL A 19 GLU A 30 SER A 97 SITE 2 AC3 5 ARG A 363 SITE 1 AC4 2 ALA A 282 ASP A 283 SITE 1 AC5 3 PHE A 275 ALA A 282 ASP A 283 SITE 1 AC6 2 MET A 146 JFX A 501 SITE 1 AC7 4 MET A 213 VAL A 278 ILE A 317 PHE A 404 SITE 1 AC8 2 ASN A 324 ARG A 327 CRYST1 77.804 77.804 146.374 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012853 0.007421 0.000000 0.00000 SCALE2 0.000000 0.014841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006832 0.00000