data_6PCE # _entry.id 6PCE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6PCE WWPDB D_1000242317 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6PCE _pdbx_database_status.recvd_initial_deposition_date 2019-06-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Maher, M.J.' 1 0000-0003-0848-9640 'Maghool, S.' 2 0000-0001-7788-9061 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Life Sci Alliance' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2575-1077 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 2 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural and functional characterization of the mitochondrial complex IV assembly factor Coa6.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.26508/lsa.201900458 _citation.pdbx_database_id_PubMed 31515291 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maghool, S.' 1 0000-0001-7788-9061 primary 'Cooray, N.D.G.' 2 ? primary 'Stroud, D.A.' 3 0000-0002-2048-3383 primary 'Aragao, D.' 4 0000-0002-6551-4657 primary 'Ryan, M.T.' 5 0000-0003-2586-8829 primary 'Maher, M.J.' 6 0000-0003-0848-9640 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6PCE _cell.details ? _cell.formula_units_Z ? _cell.length_a 31.950 _cell.length_a_esd ? _cell.length_b 52.409 _cell.length_b_esd ? _cell.length_c 78.296 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c oxidase assembly factor 6 homolog' 8550.630 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 53 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPS _entity_poly.pdbx_seq_one_letter_code_can PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPS _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 SER n 1 3 MET n 1 4 LYS n 1 5 GLU n 1 6 ARG n 1 7 GLN n 1 8 VAL n 1 9 CYS n 1 10 TRP n 1 11 GLY n 1 12 ALA n 1 13 ARG n 1 14 ASP n 1 15 GLU n 1 16 TYR n 1 17 TRP n 1 18 LYS n 1 19 CYS n 1 20 LEU n 1 21 ASP n 1 22 GLU n 1 23 ASN n 1 24 LEU n 1 25 GLU n 1 26 ASP n 1 27 ALA n 1 28 SER n 1 29 GLN n 1 30 CYS n 1 31 LYS n 1 32 LYS n 1 33 LEU n 1 34 ARG n 1 35 SER n 1 36 SER n 1 37 PHE n 1 38 GLU n 1 39 SER n 1 40 SER n 1 41 CYS n 1 42 PRO n 1 43 GLN n 1 44 GLN n 1 45 TRP n 1 46 ILE n 1 47 LYS n 1 48 TYR n 1 49 PHE n 1 50 ASP n 1 51 LYS n 1 52 ARG n 1 53 ARG n 1 54 ASP n 1 55 TYR n 1 56 LEU n 1 57 LYS n 1 58 PHE n 1 59 LYS n 1 60 GLU n 1 61 LYS n 1 62 PHE n 1 63 GLU n 1 64 ALA n 1 65 GLY n 1 66 GLN n 1 67 PHE n 1 68 GLU n 1 69 PRO n 1 70 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 70 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'COA6, C1orf31' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code COA6_HUMAN _struct_ref.pdbx_db_accession Q5JTJ3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPS _struct_ref.pdbx_align_begin 50 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6PCE A 1 ? 70 ? Q5JTJ3 50 ? 119 ? 50 119 2 1 6PCE B 1 ? 70 ? Q5JTJ3 50 ? 119 ? 50 119 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6PCE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.6, 29% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-06-01 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6PCE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16393 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1602 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.38 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -0.78 _refine.B_iso_max ? _refine.B_iso_mean 29.561 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6PCE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.65 _refine.ls_d_res_low 43.55 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14716 _refine.ls_number_reflns_R_free 1632 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.59 _refine.ls_percent_reflns_R_free 10.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19234 _refine.ls_R_factor_R_free 0.22912 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18832 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.111 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.764 _refine.overall_SU_ML 0.076 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 43.55 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 1155 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1097 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.013 1170 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.018 1007 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.749 1.654 1581 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.525 1.601 2350 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.180 5.000 142 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.223 21.667 78 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.545 15.000 213 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 7.297 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 136 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.020 1325 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 292 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.717 2.147 532 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.677 2.140 531 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 6.303 3.188 665 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 6.303 3.198 666 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 11.059 2.874 638 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 11.048 2.874 638 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 12.580 3.987 910 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 12.573 25.464 1431 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 12.564 25.299 1423 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.651 _refine_ls_shell.d_res_low 1.694 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_R_work 1034 _refine_ls_shell.percent_reflns_obs 97.30 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.334 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.275 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6PCE _struct.title 'Human Coa6' _struct.pdbx_descriptor 'Cytochrome c oxidase assembly factor 6 homolog' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6PCE _struct_keywords.text 'Coa6 copper Cytochrome c oxidase mitochondria structure, METAL BINDING PROTEIN' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 3 ? ASN A 23 ? MET A 52 ASN A 72 1 ? 21 HELX_P HELX_P2 AA2 ASP A 26 ? GLN A 29 ? ASP A 75 GLN A 78 5 ? 4 HELX_P HELX_P3 AA3 CYS A 30 ? CYS A 41 ? CYS A 79 CYS A 90 1 ? 12 HELX_P HELX_P4 AA4 PRO A 42 ? GLU A 60 ? PRO A 91 GLU A 109 1 ? 19 HELX_P HELX_P5 AA5 SER B 2 ? ASN B 23 ? SER B 51 ASN B 72 1 ? 22 HELX_P HELX_P6 AA6 CYS B 30 ? CYS B 41 ? CYS B 79 CYS B 90 1 ? 12 HELX_P HELX_P7 AA7 PRO B 42 ? GLU B 68 ? PRO B 91 GLU B 117 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 58 A CYS 90 1_555 ? ? ? ? ? ? ? 2.057 ? disulf2 disulf ? ? A CYS 19 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 68 A CYS 79 1_555 ? ? ? ? ? ? ? 2.040 ? disulf3 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 41 SG ? ? B CYS 58 B CYS 90 1_555 ? ? ? ? ? ? ? 2.041 ? disulf4 disulf ? ? B CYS 19 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 68 B CYS 79 1_555 ? ? ? ? ? ? ? 2.002 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue SO4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLN A 29 ? GLN A 78 . ? 1_555 ? 2 AC1 4 ARG A 52 ? ARG A 101 . ? 4_555 ? 3 AC1 4 ARG B 52 ? ARG B 101 . ? 4_555 ? 4 AC1 4 TYR B 55 ? TYR B 104 . ? 4_555 ? # _atom_sites.entry_id 6PCE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.031299 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019081 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012772 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 50 ? ? ? A . n A 1 2 SER 2 51 ? ? ? A . n A 1 3 MET 3 52 52 MET MET A . n A 1 4 LYS 4 53 53 LYS LYS A . n A 1 5 GLU 5 54 54 GLU GLU A . n A 1 6 ARG 6 55 55 ARG ARG A . n A 1 7 GLN 7 56 56 GLN GLN A . n A 1 8 VAL 8 57 57 VAL VAL A . n A 1 9 CYS 9 58 58 CYS CYS A . n A 1 10 TRP 10 59 59 TRP TRP A . n A 1 11 GLY 11 60 60 GLY GLY A . n A 1 12 ALA 12 61 61 ALA ALA A . n A 1 13 ARG 13 62 62 ARG ARG A . n A 1 14 ASP 14 63 63 ASP ASP A . n A 1 15 GLU 15 64 64 GLU GLU A . n A 1 16 TYR 16 65 65 TYR TYR A . n A 1 17 TRP 17 66 66 TRP TRP A . n A 1 18 LYS 18 67 67 LYS LYS A . n A 1 19 CYS 19 68 68 CYS CYS A . n A 1 20 LEU 20 69 69 LEU LEU A . n A 1 21 ASP 21 70 70 ASP ASP A . n A 1 22 GLU 22 71 71 GLU GLU A . n A 1 23 ASN 23 72 72 ASN ASN A . n A 1 24 LEU 24 73 73 LEU LEU A . n A 1 25 GLU 25 74 74 GLU GLU A . n A 1 26 ASP 26 75 75 ASP ASP A . n A 1 27 ALA 27 76 76 ALA ALA A . n A 1 28 SER 28 77 77 SER SER A . n A 1 29 GLN 29 78 78 GLN GLN A . n A 1 30 CYS 30 79 79 CYS CYS A . n A 1 31 LYS 31 80 80 LYS LYS A . n A 1 32 LYS 32 81 81 LYS LYS A . n A 1 33 LEU 33 82 82 LEU LEU A . n A 1 34 ARG 34 83 83 ARG ARG A . n A 1 35 SER 35 84 84 SER SER A . n A 1 36 SER 36 85 85 SER SER A . n A 1 37 PHE 37 86 86 PHE PHE A . n A 1 38 GLU 38 87 87 GLU GLU A . n A 1 39 SER 39 88 88 SER SER A . n A 1 40 SER 40 89 89 SER SER A . n A 1 41 CYS 41 90 90 CYS CYS A . n A 1 42 PRO 42 91 91 PRO PRO A . n A 1 43 GLN 43 92 92 GLN GLN A . n A 1 44 GLN 44 93 93 GLN GLN A . n A 1 45 TRP 45 94 94 TRP TRP A . n A 1 46 ILE 46 95 95 ILE ILE A . n A 1 47 LYS 47 96 96 LYS LYS A . n A 1 48 TYR 48 97 97 TYR TYR A . n A 1 49 PHE 49 98 98 PHE PHE A . n A 1 50 ASP 50 99 99 ASP ASP A . n A 1 51 LYS 51 100 100 LYS LYS A . n A 1 52 ARG 52 101 101 ARG ARG A . n A 1 53 ARG 53 102 102 ARG ARG A . n A 1 54 ASP 54 103 103 ASP ASP A . n A 1 55 TYR 55 104 104 TYR TYR A . n A 1 56 LEU 56 105 105 LEU LEU A . n A 1 57 LYS 57 106 106 LYS LYS A . n A 1 58 PHE 58 107 107 PHE PHE A . n A 1 59 LYS 59 108 108 LYS LYS A . n A 1 60 GLU 60 109 109 GLU GLU A . n A 1 61 LYS 61 110 110 LYS LYS A . n A 1 62 PHE 62 111 111 PHE PHE A . n A 1 63 GLU 63 112 ? ? ? A . n A 1 64 ALA 64 113 ? ? ? A . n A 1 65 GLY 65 114 ? ? ? A . n A 1 66 GLN 66 115 ? ? ? A . n A 1 67 PHE 67 116 ? ? ? A . n A 1 68 GLU 68 117 ? ? ? A . n A 1 69 PRO 69 118 ? ? ? A . n A 1 70 SER 70 119 ? ? ? A . n B 1 1 PRO 1 50 50 PRO PRO B . n B 1 2 SER 2 51 51 SER SER B . n B 1 3 MET 3 52 52 MET MET B . n B 1 4 LYS 4 53 53 LYS LYS B . n B 1 5 GLU 5 54 54 GLU GLU B . n B 1 6 ARG 6 55 55 ARG ARG B . n B 1 7 GLN 7 56 56 GLN GLN B . n B 1 8 VAL 8 57 57 VAL VAL B . n B 1 9 CYS 9 58 58 CYS CYS B . n B 1 10 TRP 10 59 59 TRP TRP B . n B 1 11 GLY 11 60 60 GLY GLY B . n B 1 12 ALA 12 61 61 ALA ALA B . n B 1 13 ARG 13 62 62 ARG ARG B . n B 1 14 ASP 14 63 63 ASP ASP B . n B 1 15 GLU 15 64 64 GLU GLU B . n B 1 16 TYR 16 65 65 TYR TYR B . n B 1 17 TRP 17 66 66 TRP TRP B . n B 1 18 LYS 18 67 67 LYS LYS B . n B 1 19 CYS 19 68 68 CYS CYS B . n B 1 20 LEU 20 69 69 LEU LEU B . n B 1 21 ASP 21 70 70 ASP ASP B . n B 1 22 GLU 22 71 71 GLU GLU B . n B 1 23 ASN 23 72 72 ASN ASN B . n B 1 24 LEU 24 73 73 LEU LEU B . n B 1 25 GLU 25 74 74 GLU GLU B . n B 1 26 ASP 26 75 75 ASP ASP B . n B 1 27 ALA 27 76 76 ALA ALA B . n B 1 28 SER 28 77 77 SER SER B . n B 1 29 GLN 29 78 78 GLN GLN B . n B 1 30 CYS 30 79 79 CYS CYS B . n B 1 31 LYS 31 80 80 LYS LYS B . n B 1 32 LYS 32 81 81 LYS LYS B . n B 1 33 LEU 33 82 82 LEU LEU B . n B 1 34 ARG 34 83 83 ARG ARG B . n B 1 35 SER 35 84 84 SER SER B . n B 1 36 SER 36 85 85 SER SER B . n B 1 37 PHE 37 86 86 PHE PHE B . n B 1 38 GLU 38 87 87 GLU GLU B . n B 1 39 SER 39 88 88 SER SER B . n B 1 40 SER 40 89 89 SER SER B . n B 1 41 CYS 41 90 90 CYS CYS B . n B 1 42 PRO 42 91 91 PRO PRO B . n B 1 43 GLN 43 92 92 GLN GLN B . n B 1 44 GLN 44 93 93 GLN GLN B . n B 1 45 TRP 45 94 94 TRP TRP B . n B 1 46 ILE 46 95 95 ILE ILE B . n B 1 47 LYS 47 96 96 LYS LYS B . n B 1 48 TYR 48 97 97 TYR TYR B . n B 1 49 PHE 49 98 98 PHE PHE B . n B 1 50 ASP 50 99 99 ASP ASP B . n B 1 51 LYS 51 100 100 LYS LYS B . n B 1 52 ARG 52 101 101 ARG ARG B . n B 1 53 ARG 53 102 102 ARG ARG B . n B 1 54 ASP 54 103 103 ASP ASP B . n B 1 55 TYR 55 104 104 TYR TYR B . n B 1 56 LEU 56 105 105 LEU LEU B . n B 1 57 LYS 57 106 106 LYS LYS B . n B 1 58 PHE 58 107 107 PHE PHE B . n B 1 59 LYS 59 108 108 LYS LYS B . n B 1 60 GLU 60 109 109 GLU GLU B . n B 1 61 LYS 61 110 110 LYS LYS B . n B 1 62 PHE 62 111 111 PHE PHE B . n B 1 63 GLU 63 112 112 GLU GLU B . n B 1 64 ALA 64 113 113 ALA ALA B . n B 1 65 GLY 65 114 114 GLY GLY B . n B 1 66 GLN 66 115 115 GLN GLN B . n B 1 67 PHE 67 116 116 PHE PHE B . n B 1 68 GLU 68 117 117 GLU GLU B . n B 1 69 PRO 69 118 118 PRO PRO B . n B 1 70 SER 70 119 119 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 201 134 SO4 SO4 A . D 3 HOH 1 301 23 HOH HOH A . D 3 HOH 2 302 10 HOH HOH A . D 3 HOH 3 303 53 HOH HOH A . D 3 HOH 4 304 15 HOH HOH A . D 3 HOH 5 305 26 HOH HOH A . D 3 HOH 6 306 37 HOH HOH A . D 3 HOH 7 307 14 HOH HOH A . D 3 HOH 8 308 41 HOH HOH A . D 3 HOH 9 309 58 HOH HOH A . D 3 HOH 10 310 42 HOH HOH A . D 3 HOH 11 311 57 HOH HOH A . D 3 HOH 12 312 64 HOH HOH A . D 3 HOH 13 313 5 HOH HOH A . D 3 HOH 14 314 21 HOH HOH A . D 3 HOH 15 315 38 HOH HOH A . D 3 HOH 16 316 1 HOH HOH A . D 3 HOH 17 317 20 HOH HOH A . D 3 HOH 18 318 47 HOH HOH A . D 3 HOH 19 319 40 HOH HOH A . D 3 HOH 20 320 4 HOH HOH A . D 3 HOH 21 321 7 HOH HOH A . D 3 HOH 22 322 13 HOH HOH A . D 3 HOH 23 323 2 HOH HOH A . D 3 HOH 24 324 9 HOH HOH A . D 3 HOH 25 325 11 HOH HOH A . D 3 HOH 26 326 16 HOH HOH A . D 3 HOH 27 327 25 HOH HOH A . D 3 HOH 28 328 27 HOH HOH A . D 3 HOH 29 329 6 HOH HOH A . D 3 HOH 30 330 17 HOH HOH A . D 3 HOH 31 331 49 HOH HOH A . D 3 HOH 32 332 3 HOH HOH A . D 3 HOH 33 333 35 HOH HOH A . D 3 HOH 34 334 43 HOH HOH A . D 3 HOH 35 335 83 HOH HOH A . D 3 HOH 36 336 28 HOH HOH A . D 3 HOH 37 337 24 HOH HOH A . E 3 HOH 1 201 8 HOH HOH B . E 3 HOH 2 202 33 HOH HOH B . E 3 HOH 3 203 56 HOH HOH B . E 3 HOH 4 204 19 HOH HOH B . E 3 HOH 5 205 85 HOH HOH B . E 3 HOH 6 206 12 HOH HOH B . E 3 HOH 7 207 52 HOH HOH B . E 3 HOH 8 208 22 HOH HOH B . E 3 HOH 9 209 29 HOH HOH B . E 3 HOH 10 210 46 HOH HOH B . E 3 HOH 11 211 145 HOH HOH B . E 3 HOH 12 212 30 HOH HOH B . E 3 HOH 13 213 32 HOH HOH B . E 3 HOH 14 214 86 HOH HOH B . E 3 HOH 15 215 50 HOH HOH B . E 3 HOH 16 216 36 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1550 ? 1 MORE -22 ? 1 'SSA (A^2)' 8660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-10-02 2 'Structure model' 1 1 2020-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Author supporting evidence' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_audit_support # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -23.2470 -4.6823 -4.3639 0.1560 0.1412 0.1322 -0.0346 -0.0111 0.0043 2.4397 0.4685 8.3781 0.1996 2.4920 1.8245 0.1617 -0.0576 -0.1041 -0.0587 -0.1863 0.0152 0.0543 0.2828 -0.2014 'X-RAY DIFFRACTION' 2 ? refined -12.0622 8.8329 2.6509 0.0019 0.0368 0.0144 0.0059 -0.0006 0.0018 4.7538 6.2932 5.3344 3.7202 2.0863 1.9200 -0.0523 0.0019 0.0503 -0.2087 0.1892 0.2902 -0.0298 -0.0647 -0.3703 'X-RAY DIFFRACTION' 3 ? refined -5.7894 31.8152 -27.2797 0.0956 0.0889 0.0948 -0.0013 -0.0081 0.0201 2.5062 7.1810 9.1062 -0.9406 -0.4681 1.2477 0.1104 -0.0261 -0.0843 -0.0543 0.1916 -0.0057 0.1664 -0.1314 0.0096 'X-RAY DIFFRACTION' 4 ? refined -2.1446 13.8737 -27.8425 0.1474 0.1415 0.1538 0.0325 0.0504 -0.0630 2.4172 8.7748 2.7332 1.2256 1.0611 -1.4664 0.0479 -0.0936 0.0457 0.4197 -0.4983 -0.4803 -0.7160 0.4109 0.1298 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 52 A 55 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 56 A 78 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 50 B 55 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 56 B 86 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 4 # _pdbx_entry_details.entry_id 6PCE _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 53 ? CG ? A LYS 4 CG 2 1 Y 1 A LYS 53 ? CD ? A LYS 4 CD 3 1 Y 1 A LYS 53 ? CE ? A LYS 4 CE 4 1 Y 1 A LYS 53 ? NZ ? A LYS 4 NZ 5 1 Y 1 A GLU 54 ? CG ? A GLU 5 CG 6 1 Y 1 A GLU 54 ? CD ? A GLU 5 CD 7 1 Y 1 A GLU 54 ? OE1 ? A GLU 5 OE1 8 1 Y 1 A GLU 54 ? OE2 ? A GLU 5 OE2 9 1 Y 1 A LYS 96 ? CG ? A LYS 47 CG 10 1 Y 1 A LYS 96 ? CD ? A LYS 47 CD 11 1 Y 1 A LYS 96 ? CE ? A LYS 47 CE 12 1 Y 1 A LYS 96 ? NZ ? A LYS 47 NZ 13 1 Y 1 B LYS 67 ? CG ? B LYS 18 CG 14 1 Y 1 B LYS 67 ? CD ? B LYS 18 CD 15 1 Y 1 B LYS 67 ? CE ? B LYS 18 CE 16 1 Y 1 B LYS 67 ? NZ ? B LYS 18 NZ 17 1 Y 1 B GLU 71 ? CG ? B GLU 22 CG 18 1 Y 1 B GLU 71 ? CD ? B GLU 22 CD 19 1 Y 1 B GLU 71 ? OE1 ? B GLU 22 OE1 20 1 Y 1 B GLU 71 ? OE2 ? B GLU 22 OE2 21 1 Y 1 B LYS 80 ? CG ? B LYS 31 CG 22 1 Y 1 B LYS 80 ? CD ? B LYS 31 CD 23 1 Y 1 B LYS 80 ? CE ? B LYS 31 CE 24 1 Y 1 B LYS 80 ? NZ ? B LYS 31 NZ 25 1 Y 1 B LYS 81 ? CG ? B LYS 32 CG 26 1 Y 1 B LYS 81 ? CD ? B LYS 32 CD 27 1 Y 1 B LYS 81 ? CE ? B LYS 32 CE 28 1 Y 1 B LYS 81 ? NZ ? B LYS 32 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 50 ? A PRO 1 2 1 Y 1 A SER 51 ? A SER 2 3 1 Y 1 A GLU 112 ? A GLU 63 4 1 Y 1 A ALA 113 ? A ALA 64 5 1 Y 1 A GLY 114 ? A GLY 65 6 1 Y 1 A GLN 115 ? A GLN 66 7 1 Y 1 A PHE 116 ? A PHE 67 8 1 Y 1 A GLU 117 ? A GLU 68 9 1 Y 1 A PRO 118 ? A PRO 69 10 1 Y 1 A SER 119 ? A SER 70 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Australian Research Council (ARC)' Australia DP140102746 1 'National Health and Medical Research Council (NHMRC, Australia)' Australia GNT1165217 2 'National Health and Medical Research Council (NHMRC, Australia)' Australia GNT1140851 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #