HEADER IMMUNE SYSTEM 20-JUN-19 6PEH TITLE CRYSTAL STRUCTURE OF RABBIT MONOCLONAL ANTI-HIV ANTIBODY 1C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1C2 FAB HEAVY CHAIN; COMPND 3 CHAIN: H, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 1C2 FAB LIGHT CHAIN; COMPND 7 CHAIN: L, B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ANTIBODY, BNAB, HIV, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.LIBAN,M.PANCERA REVDAT 4 18-DEC-19 6PEH 1 REMARK REVDAT 3 04-DEC-19 6PEH 1 JRNL REVDAT 2 27-NOV-19 6PEH 1 JRNL SEQRES REVDAT 1 20-NOV-19 6PEH 0 JRNL AUTH V.DUBROVSKAYA,K.TRAN,G.OZOROWSKI,J.GUENAGA,R.WILSON,S.BALE, JRNL AUTH 2 C.A.COTTRELL,H.L.TURNER,G.SEABRIGHT,S.O'DELL,J.L.TORRES, JRNL AUTH 3 L.YANG,Y.FENG,D.P.LEAMAN,N.VAZQUEZ BERNAT,T.LIBAN,M.LOUDER, JRNL AUTH 4 K.MCKEE,R.T.BAILER,A.MOVSESYAN,N.A.DORIA-ROSE,M.PANCERA, JRNL AUTH 5 G.B.KARLSSON HEDESTAM,M.B.ZWICK,M.CRISPIN,J.R.MASCOLA, JRNL AUTH 6 A.B.WARD,R.T.WYATT JRNL TITL VACCINATION WITH GLYCAN-MODIFIED HIV NFL ENVELOPE JRNL TITL 2 TRIMER-LIPOSOMES ELICITS BROADLY NEUTRALIZING ANTIBODIES TO JRNL TITL 3 MULTIPLE SITES OF VULNERABILITY. JRNL REF IMMUNITY V. 51 915 2019 JRNL REFN ISSN 1074-7613 JRNL PMID 31732167 JRNL DOI 10.1016/J.IMMUNI.2019.10.008 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.9 REMARK 3 NUMBER OF REFLECTIONS : 42973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2127 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3309 - 5.6590 0.79 2803 161 0.1993 0.2041 REMARK 3 2 5.6590 - 4.4933 0.82 2773 135 0.1584 0.1704 REMARK 3 3 4.4933 - 3.9257 0.78 2639 144 0.1743 0.2167 REMARK 3 4 3.9257 - 3.5670 0.86 2875 136 0.2026 0.2791 REMARK 3 5 3.5670 - 3.3114 0.89 2990 129 0.2083 0.2495 REMARK 3 6 3.3114 - 3.1162 0.91 3026 163 0.2356 0.2496 REMARK 3 7 3.1162 - 2.9602 0.92 3030 154 0.2416 0.2811 REMARK 3 8 2.9602 - 2.8314 0.88 2892 165 0.2524 0.3283 REMARK 3 9 2.8314 - 2.7224 0.90 2946 162 0.2556 0.2880 REMARK 3 10 2.7224 - 2.6285 0.91 3021 142 0.2710 0.3075 REMARK 3 11 2.6285 - 2.5463 0.90 2910 162 0.2814 0.3448 REMARK 3 12 2.5463 - 2.4735 0.86 2829 148 0.2693 0.3008 REMARK 3 13 2.4735 - 2.4084 0.77 2560 124 0.2735 0.2873 REMARK 3 14 2.4084 - 2.3496 0.65 2107 128 0.2773 0.2653 REMARK 3 15 2.3496 - 2.2962 0.44 1445 74 0.3051 0.4333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6659 REMARK 3 ANGLE : 0.717 9148 REMARK 3 CHIRALITY : 0.046 1078 REMARK 3 PLANARITY : 0.004 1159 REMARK 3 DIHEDRAL : 13.983 3924 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -21.6525 -7.0405 36.1152 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.0213 REMARK 3 T33: 0.0198 T12: 0.0198 REMARK 3 T13: 0.1651 T23: 0.0973 REMARK 3 L TENSOR REMARK 3 L11: 0.5083 L22: -0.1327 REMARK 3 L33: 0.2732 L12: 0.0737 REMARK 3 L13: -0.2692 L23: 0.8128 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.0328 S13: 0.0091 REMARK 3 S21: -0.0002 S22: 0.1370 S23: 0.1291 REMARK 3 S31: 0.2205 S32: 0.2477 S33: 0.1465 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46339 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.296 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE PH 6.5, 16% PEG 3350, REMARK 280 10% MPD, 0.2M LISO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.49150 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 81.49150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 54A REMARK 465 THR H 54B REMARK 465 ARG H 54C REMARK 465 SER H 187 REMARK 465 SER H 188 REMARK 465 GLN H 189 REMARK 465 CYS H 213 REMARK 465 SER H 214 REMARK 465 LYS H 215 REMARK 465 HIS H 216 REMARK 465 HIS H 217 REMARK 465 HIS H 218 REMARK 465 HIS H 219 REMARK 465 HIS H 220 REMARK 465 HIS H 221 REMARK 465 HIS H 222 REMARK 465 HIS H 223 REMARK 465 ALA L 1 REMARK 465 CYS L 211 REMARK 465 SER A 214 REMARK 465 LYS A 215 REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 465 HIS A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 CYS B 211 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 100H CG CD CE NZ REMARK 470 THR H 212 OG1 CG2 REMARK 470 ARG L 61 CG CD NE CZ NH1 NH2 REMARK 470 ASP L 210 CG OD1 OD2 REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 THR A 131 OG1 CG2 REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 GLU B 148 CG CD OE1 OE2 REMARK 470 GLU B 159 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS B 39 O ASP B 81 1.54 REMARK 500 HH21 ARG A 164 OD1 ASN B 137 1.58 REMARK 500 O GLN L 184 HG SER L 187 1.58 REMARK 500 O HOH B 321 O HOH B 338 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O THR L 199 O HOH B 336 3545 2.11 REMARK 500 O2 SO4 A 301 O HOH A 437 3455 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 82A 60.67 35.22 REMARK 500 THR H 160 -33.51 -133.27 REMARK 500 THR H 185 -68.79 -106.36 REMARK 500 GLU L 30 -101.19 62.34 REMARK 500 THR L 51 -35.15 77.81 REMARK 500 SER L 52 -11.73 -152.67 REMARK 500 ALA L 84 -172.31 -178.84 REMARK 500 LYS L 138 83.68 42.35 REMARK 500 CYS L 170 -17.13 77.04 REMARK 500 LYS L 189 -51.52 -128.31 REMARK 500 GLU B 30 -111.27 65.43 REMARK 500 THR B 51 -44.49 80.00 REMARK 500 ALA B 84 -175.30 -178.16 REMARK 500 LYS B 138 84.92 42.58 REMARK 500 LYS B 189 -53.76 -120.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PCA A 2 and SER A 3 DBREF 6PEH H 2 223 PDB 6PEH 6PEH 2 223 DBREF 6PEH L 1 211 PDB 6PEH 6PEH 1 211 DBREF 6PEH A 2 223 PDB 6PEH 6PEH 2 223 DBREF 6PEH B 1 211 PDB 6PEH 6PEH 1 211 SEQRES 1 H 237 PCA SER LEU GLU GLU SER GLY GLY ASP LEU VAL LYS PRO SEQRES 2 H 237 GLY ALA SER LEU THR LEU THR CYS THR ALA SER GLY PHE SEQRES 3 H 237 SER PHE GLY TRP ASN ASP TYR MET SER TRP VAL ARG GLN SEQRES 4 H 237 ALA PRO GLY LYS GLY LEU GLU TRP ILE GLY CYS ILE TYR SEQRES 5 H 237 ALA GLY SER THR ARG SER THR TYR TYR ALA ASN TRP ALA SEQRES 6 H 237 LYS GLY ARG LEU THR ILE SER LYS THR SER SER THR ALA SEQRES 7 H 237 VAL THR LEU GLN MET THR SER LEU THR ALA ALA ASP THR SEQRES 8 H 237 ALA THR TYR PHE CYS ALA ARG GLY ALA VAL THR TYR ASP SEQRES 9 H 237 GLY LEU GLY GLY ALA TYR LEU LYS HIS PHE ASN LEU TRP SEQRES 10 H 237 GLY PRO GLY THR LEU VAL THR VAL SER SER GLY GLN PRO SEQRES 11 H 237 LYS ALA PRO SER VAL PHE PRO LEU ALA PRO CYS CYS GLY SEQRES 12 H 237 ASP THR PRO SER SER THR VAL THR LEU GLY CYS LEU VAL SEQRES 13 H 237 LYS GLY TYR LEU PRO GLU PRO VAL THR VAL THR TRP ASN SEQRES 14 H 237 SER GLY THR LEU THR ASN GLY VAL ARG THR PHE PRO SER SEQRES 15 H 237 VAL ARG GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 237 VAL SER VAL THR SER SER SER GLN PRO VAL THR CYS ASN SEQRES 17 H 237 VAL ALA HIS PRO ALA THR ASN THR LYS VAL ASP LYS THR SEQRES 18 H 237 VAL ALA PRO SER THR CYS SER LYS HIS HIS HIS HIS HIS SEQRES 19 H 237 HIS HIS HIS SEQRES 1 L 215 ALA ILE LYS MET THR GLN THR PRO SER SER VAL SER ALA SEQRES 2 L 215 ALA VAL GLY GLY THR VAL THR VAL ASN CYS ARG ALA SER SEQRES 3 L 215 GLU ASP ILE GLU SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY GLN PRO PRO LYS LEU LEU ILE TYR ASP THR SER SEQRES 5 L 215 LYS LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 L 215 GLY SER GLY THR GLN PHE ALA LEU THR ILE SER GLY VAL SEQRES 7 L 215 GLN CYS ASP ASP ALA ALA THR TYR TYR CYS LEU TYR GLY SEQRES 8 L 215 TYR ILE SER SER ASP ARG ILE ASP PHE GLY PHE GLY GLY SEQRES 9 L 215 GLY THR GLU LEU VAL VAL LYS GLY ASP PRO VAL ALA PRO SEQRES 10 L 215 SER VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN VAL ALA SEQRES 11 L 215 THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN LYS TYR SEQRES 12 L 215 PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP GLY THR SEQRES 13 L 215 THR GLN THR THR GLY ILE GLU ASN SER LYS THR PRO GLN SEQRES 14 L 215 ASN SER ALA ASP CYS THR TYR ASN LEU SER SER THR LEU SEQRES 15 L 215 THR LEU THR SER THR GLN TYR ASN SER HIS LYS GLU TYR SEQRES 16 L 215 THR CYS LYS VAL THR GLN GLY THR THR SER VAL VAL GLN SEQRES 17 L 215 SER PHE ASN ARG GLY ASP CYS SEQRES 1 A 237 PCA SER LEU GLU GLU SER GLY GLY ASP LEU VAL LYS PRO SEQRES 2 A 237 GLY ALA SER LEU THR LEU THR CYS THR ALA SER GLY PHE SEQRES 3 A 237 SER PHE GLY TRP ASN ASP TYR MET SER TRP VAL ARG GLN SEQRES 4 A 237 ALA PRO GLY LYS GLY LEU GLU TRP ILE GLY CYS ILE TYR SEQRES 5 A 237 ALA GLY SER THR ARG SER THR TYR TYR ALA ASN TRP ALA SEQRES 6 A 237 LYS GLY ARG LEU THR ILE SER LYS THR SER SER THR ALA SEQRES 7 A 237 VAL THR LEU GLN MET THR SER LEU THR ALA ALA ASP THR SEQRES 8 A 237 ALA THR TYR PHE CYS ALA ARG GLY ALA VAL THR TYR ASP SEQRES 9 A 237 GLY LEU GLY GLY ALA TYR LEU LYS HIS PHE ASN LEU TRP SEQRES 10 A 237 GLY PRO GLY THR LEU VAL THR VAL SER SER GLY GLN PRO SEQRES 11 A 237 LYS ALA PRO SER VAL PHE PRO LEU ALA PRO CYS CYS GLY SEQRES 12 A 237 ASP THR PRO SER SER THR VAL THR LEU GLY CYS LEU VAL SEQRES 13 A 237 LYS GLY TYR LEU PRO GLU PRO VAL THR VAL THR TRP ASN SEQRES 14 A 237 SER GLY THR LEU THR ASN GLY VAL ARG THR PHE PRO SER SEQRES 15 A 237 VAL ARG GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 A 237 VAL SER VAL THR SER SER SER GLN PRO VAL THR CYS ASN SEQRES 17 A 237 VAL ALA HIS PRO ALA THR ASN THR LYS VAL ASP LYS THR SEQRES 18 A 237 VAL ALA PRO SER THR CYS SER LYS HIS HIS HIS HIS HIS SEQRES 19 A 237 HIS HIS HIS SEQRES 1 B 215 ALA ILE LYS MET THR GLN THR PRO SER SER VAL SER ALA SEQRES 2 B 215 ALA VAL GLY GLY THR VAL THR VAL ASN CYS ARG ALA SER SEQRES 3 B 215 GLU ASP ILE GLU SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 B 215 PRO GLY GLN PRO PRO LYS LEU LEU ILE TYR ASP THR SER SEQRES 5 B 215 LYS LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 B 215 GLY SER GLY THR GLN PHE ALA LEU THR ILE SER GLY VAL SEQRES 7 B 215 GLN CYS ASP ASP ALA ALA THR TYR TYR CYS LEU TYR GLY SEQRES 8 B 215 TYR ILE SER SER ASP ARG ILE ASP PHE GLY PHE GLY GLY SEQRES 9 B 215 GLY THR GLU LEU VAL VAL LYS GLY ASP PRO VAL ALA PRO SEQRES 10 B 215 SER VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN VAL ALA SEQRES 11 B 215 THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN LYS TYR SEQRES 12 B 215 PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP GLY THR SEQRES 13 B 215 THR GLN THR THR GLY ILE GLU ASN SER LYS THR PRO GLN SEQRES 14 B 215 ASN SER ALA ASP CYS THR TYR ASN LEU SER SER THR LEU SEQRES 15 B 215 THR LEU THR SER THR GLN TYR ASN SER HIS LYS GLU TYR SEQRES 16 B 215 THR CYS LYS VAL THR GLN GLY THR THR SER VAL VAL GLN SEQRES 17 B 215 SER PHE ASN ARG GLY ASP CYS HET PCA H 2 14 HET PCA A 2 14 HET SO4 L 301 5 HET SO4 A 301 5 HETNAM PCA PYROGLUTAMIC ACID HETNAM SO4 SULFATE ION FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *268(H2 O) HELIX 1 AA1 THR H 83 THR H 87 5 5 HELIX 2 AA2 SER H 156 THR H 158 5 3 HELIX 3 AA3 PRO H 198 ASN H 201 5 4 HELIX 4 AA4 GLN L 79 ALA L 83 5 5 HELIX 5 AA5 GLN L 124 THR L 127 5 4 HELIX 6 AA6 SER L 182 HIS L 188 1 7 HELIX 7 AA7 THR A 83 THR A 87 5 5 HELIX 8 AA8 SER A 156 THR A 158 5 3 HELIX 9 AA9 THR A 185 GLN A 189 5 5 HELIX 10 AB1 PRO A 198 ASN A 201 5 4 HELIX 11 AB2 GLN B 79 ALA B 83 5 5 HELIX 12 AB3 GLN B 124 THR B 127 5 4 HELIX 13 AB4 SER B 182 SER B 187 1 6 SHEET 1 AA1 4 SER H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O THR H 21 N SER H 7 SHEET 3 AA1 4 ALA H 76 MET H 81 -1 O VAL H 77 N CYS H 22 SHEET 4 AA1 4 LEU H 67 LYS H 71 -1 N THR H 68 O GLN H 80 SHEET 1 AA2 9 LYS L 53 LEU L 54 0 SHEET 2 AA2 9 LYS L 45 TYR L 49 -1 N TYR L 49 O LYS L 53 SHEET 3 AA2 9 ALA L 34 GLN L 38 -1 N GLN L 37 O LYS L 45 SHEET 4 AA2 9 THR L 85 ILE L 93 -1 O THR L 85 N GLN L 38 SHEET 5 AA2 9 ALA H 100E TRP H 103 -1 N ALA H 100E O ILE L 93 SHEET 6 AA2 9 ALA H 88 TYR H 99 -1 N ALA H 96 O LYS H 100H SHEET 7 AA2 9 TYR H 34 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 8 AA2 9 LEU H 45 TYR H 52 -1 O GLY H 49 N TRP H 36 SHEET 9 AA2 9 THR H 57 TYR H 59 -1 O TYR H 58 N CYS H 50 SHEET 1 AA3 4 ASP L 95D PHE L 98 0 SHEET 2 AA3 4 THR L 85 ILE L 93 -1 N TYR L 92 O ASP L 95D SHEET 3 AA3 4 THR L 102 LYS L 107 -1 O THR L 102 N TYR L 86 SHEET 4 AA3 4 SER L 10 ALA L 14 1 N VAL L 11 O GLU L 103 SHEET 1 AA4 6 LEU H 11 VAL H 12 0 SHEET 2 AA4 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA4 6 ALA H 88 TYR H 99 -1 N TYR H 90 O THR H 107 SHEET 4 AA4 6 TYR H 34 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 AA4 6 LEU H 45 TYR H 52 -1 O GLY H 49 N TRP H 36 SHEET 6 AA4 6 THR H 57 TYR H 59 -1 O TYR H 58 N CYS H 50 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 VAL H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 163 THR H 165 -1 N ARG H 164 O VAL H 181 SHEET 1 AA6 4 SER H 120 LEU H 124 0 SHEET 2 AA6 4 VAL H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA6 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA6 4 VAL H 169 ARG H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA7 3 THR H 151 TRP H 154 0 SHEET 2 AA7 3 VAL H 191 HIS H 197 -1 O ASN H 194 N THR H 153 SHEET 3 AA7 3 THR H 202 VAL H 208 -1 O VAL H 204 N VAL H 195 SHEET 1 AA8 4 MET L 4 THR L 5 0 SHEET 2 AA8 4 THR L 18 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA8 4 GLN L 70 SER L 76 -1 O LEU L 73 N VAL L 21 SHEET 4 AA8 4 PHE L 62 SER L 67 -1 N LYS L 63 O THR L 74 SHEET 1 AA9 4 SER L 114 PHE L 118 0 SHEET 2 AA9 4 THR L 129 TYR L 139 -1 O VAL L 135 N LEU L 116 SHEET 3 AA9 4 TYR L 172 THR L 181 -1 O TYR L 172 N TYR L 139 SHEET 4 AA9 4 ILE L 158 LYS L 162 -1 N GLU L 159 O THR L 177 SHEET 1 AB1 4 THR L 152 THR L 153 0 SHEET 2 AB1 4 THR L 144 VAL L 149 -1 N VAL L 149 O THR L 152 SHEET 3 AB1 4 GLU L 190 GLN L 197 -1 O THR L 196 N THR L 144 SHEET 4 AB1 4 THR L 200 ASN L 207 -1 O VAL L 202 N VAL L 195 SHEET 1 AB2 4 SER A 3 SER A 7 0 SHEET 2 AB2 4 LEU A 18 SER A 25 -1 O THR A 23 N GLU A 5 SHEET 3 AB2 4 ALA A 76 MET A 81 -1 O VAL A 77 N CYS A 22 SHEET 4 AB2 4 LEU A 67 LYS A 71 -1 N THR A 68 O GLN A 80 SHEET 1 AB3 9 LYS B 53 LEU B 54 0 SHEET 2 AB3 9 LYS B 45 TYR B 49 -1 N TYR B 49 O LYS B 53 SHEET 3 AB3 9 ALA B 34 GLN B 38 -1 N GLN B 37 O LYS B 45 SHEET 4 AB3 9 ALA B 84 ILE B 93 -1 O THR B 85 N GLN B 38 SHEET 5 AB3 9 ALA A 100E TRP A 103 -1 N LEU A 100G O GLY B 91 SHEET 6 AB3 9 ALA A 88 TYR A 99 -1 N ALA A 96 O LYS A 100H SHEET 7 AB3 9 TYR A 34 GLN A 39 -1 N VAL A 37 O PHE A 91 SHEET 8 AB3 9 LEU A 45 TYR A 52 -1 O ILE A 48 N TRP A 36 SHEET 9 AB3 9 THR A 57 TYR A 59 -1 O TYR A 58 N CYS A 50 SHEET 1 AB4 4 ASP B 95D PHE B 98 0 SHEET 2 AB4 4 ALA B 84 ILE B 93 -1 N TYR B 92 O ASP B 95D SHEET 3 AB4 4 THR B 102 LYS B 107 -1 O LEU B 104 N ALA B 84 SHEET 4 AB4 4 SER B 10 ALA B 14 1 N VAL B 11 O GLU B 103 SHEET 1 AB5 6 LEU A 11 VAL A 12 0 SHEET 2 AB5 6 THR A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AB5 6 ALA A 88 TYR A 99 -1 N ALA A 88 O VAL A 109 SHEET 4 AB5 6 TYR A 34 GLN A 39 -1 N VAL A 37 O PHE A 91 SHEET 5 AB5 6 LEU A 45 TYR A 52 -1 O ILE A 48 N TRP A 36 SHEET 6 AB5 6 THR A 57 TYR A 59 -1 O TYR A 58 N CYS A 50 SHEET 1 AB6 4 SER A 120 LEU A 124 0 SHEET 2 AB6 4 VAL A 136 TYR A 145 -1 O LEU A 141 N PHE A 122 SHEET 3 AB6 4 TYR A 176 VAL A 184 -1 O LEU A 178 N VAL A 142 SHEET 4 AB6 4 ARG A 164 THR A 165 -1 N ARG A 164 O VAL A 181 SHEET 1 AB7 4 SER A 120 LEU A 124 0 SHEET 2 AB7 4 VAL A 136 TYR A 145 -1 O LEU A 141 N PHE A 122 SHEET 3 AB7 4 TYR A 176 VAL A 184 -1 O LEU A 178 N VAL A 142 SHEET 4 AB7 4 VAL A 169 ARG A 170 -1 N VAL A 169 O SER A 177 SHEET 1 AB8 3 THR A 151 TRP A 154 0 SHEET 2 AB8 3 VAL A 191 HIS A 197 -1 O ASN A 194 N THR A 153 SHEET 3 AB8 3 THR A 202 VAL A 208 -1 O VAL A 204 N VAL A 195 SHEET 1 AB9 4 MET B 4 THR B 7 0 SHEET 2 AB9 4 THR B 18 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AB9 4 GLN B 70 SER B 76 -1 O ILE B 75 N VAL B 19 SHEET 4 AB9 4 PHE B 62 SER B 67 -1 N LYS B 63 O THR B 74 SHEET 1 AC1 4 SER B 114 PHE B 118 0 SHEET 2 AC1 4 THR B 129 TYR B 139 -1 O ASN B 137 N SER B 114 SHEET 3 AC1 4 TYR B 172 THR B 181 -1 O LEU B 180 N VAL B 130 SHEET 4 AC1 4 ILE B 158 LYS B 162 -1 N SER B 161 O SER B 175 SHEET 1 AC2 4 THR B 152 THR B 153 0 SHEET 2 AC2 4 THR B 144 VAL B 149 -1 N VAL B 149 O THR B 152 SHEET 3 AC2 4 GLU B 190 GLN B 197 -1 O THR B 196 N THR B 144 SHEET 4 AC2 4 THR B 200 ASN B 207 -1 O GLN B 204 N CYS B 193 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS H 140 CYS H 193 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 4 CYS L 80 CYS L 170 1555 1555 2.03 SSBOND 5 CYS L 134 CYS L 193 1555 1555 2.04 SSBOND 6 CYS A 22 CYS A 92 1555 1555 2.02 SSBOND 7 CYS A 128 CYS A 213 1555 1555 2.04 SSBOND 8 CYS A 140 CYS A 193 1555 1555 2.04 SSBOND 9 CYS B 23 CYS B 88 1555 1555 2.04 SSBOND 10 CYS B 80 CYS B 170 1555 1555 2.04 SSBOND 11 CYS B 134 CYS B 193 1555 1555 2.03 LINK C PCA H 2 N SER H 3 1555 1555 1.33 LINK C PCA A 2 N SER A 3 1555 1555 1.33 CISPEP 1 LEU H 146 PRO H 147 0 -7.91 CISPEP 2 GLU H 148 PRO H 149 0 -1.29 CISPEP 3 THR L 7 PRO L 8 0 2.37 CISPEP 4 PHE L 140 PRO L 141 0 3.24 CISPEP 5 LEU A 146 PRO A 147 0 -1.66 CISPEP 6 GLU A 148 PRO A 149 0 -1.71 CISPEP 7 GLN A 189 PRO A 190 0 -3.00 CISPEP 8 THR B 7 PRO B 8 0 -1.97 CISPEP 9 PHE B 140 PRO B 141 0 3.93 SITE 1 AC1 3 TYR L 49 LYS L 53 HOH L 413 SITE 1 AC2 5 ARG A 55 THR A 185 SER A 186 SER A 187 SITE 2 AC2 5 HOH A 437 SITE 1 AC3 6 LEU A 4 ALA A 24 SER A 25 GLY A 26 SITE 2 AC3 6 PHE A 27 LEU A 102 CRYST1 71.799 98.610 162.983 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013928 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006136 0.00000 HETATM 1 N PCA H 2 -23.684 1.395 34.268 1.00 60.37 N ANISOU 1 N PCA H 2 7802 7233 7904 235 680 235 N HETATM 2 CA PCA H 2 -24.754 1.408 33.281 1.00 56.89 C ANISOU 2 CA PCA H 2 7348 6794 7473 239 682 242 C HETATM 3 CB PCA H 2 -25.158 2.853 32.991 1.00 59.57 C ANISOU 3 CB PCA H 2 7673 7118 7843 232 700 243 C HETATM 4 CG PCA H 2 -24.369 3.743 33.939 1.00 60.98 C ANISOU 4 CG PCA H 2 7853 7283 8032 220 708 231 C HETATM 5 CD PCA H 2 -23.443 2.784 34.642 1.00 61.57 C ANISOU 5 CD PCA H 2 7946 7367 8081 223 697 228 C HETATM 6 OE PCA H 2 -22.598 3.143 35.459 1.00 63.09 O ANISOU 6 OE PCA H 2 8146 7551 8275 215 705 221 O HETATM 7 C PCA H 2 -24.337 0.688 32.006 1.00 49.41 C ANISOU 7 C PCA H 2 6419 5852 6504 248 686 248 C HETATM 8 O PCA H 2 -23.157 0.656 31.653 1.00 46.70 O ANISOU 8 O PCA H 2 6097 5504 6143 248 693 245 O HETATM 9 H PCA H 2 -23.206 0.601 34.586 1.00 72.46 H HETATM 10 HA PCA H 2 -25.530 0.947 33.663 1.00 68.28 H HETATM 11 HB2 PCA H 2 -26.123 2.962 33.118 1.00 71.50 H HETATM 12 HB3 PCA H 2 -24.941 3.080 32.062 1.00 71.50 H HETATM 13 HG2 PCA H 2 -24.969 4.203 34.562 1.00 73.19 H HETATM 14 HG3 PCA H 2 -23.861 4.414 33.438 1.00 73.19 H