HEADER FLUORESCENT PROTEIN 22-JUN-19 6PFR TITLE RSEGFP2 WITH A CHLORINATED CHROMOPHORE IN THE FLUORESCENT ON-STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GREEN FLUORESCENT PROTEIN, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.CHANG,M.G.ROMEI,S.G.BOXER REVDAT 7 15-NOV-23 6PFR 1 REMARK REVDAT 6 11-OCT-23 6PFR 1 REMARK REVDAT 5 01-JAN-20 6PFR 1 REMARK REVDAT 4 23-OCT-19 6PFR 1 SEQRES HETSYN REVDAT 3 16-OCT-19 6PFR 1 JRNL REVDAT 2 02-OCT-19 6PFR 1 JRNL REVDAT 1 07-AUG-19 6PFR 0 JRNL AUTH J.CHANG,M.G.ROMEI,S.G.BOXER JRNL TITL STRUCTURAL EVIDENCE OF PHOTOISOMERIZATION PATHWAYS IN JRNL TITL 2 FLUORESCENT PROTEINS. JRNL REF J.AM.CHEM.SOC. V. 141 15504 2019 JRNL REFN ESSN 1520-5126 JRNL PMID 31533429 JRNL DOI 10.1021/JACS.9B08356 REMARK 2 REMARK 2 RESOLUTION. 1.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13RC2_2986 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 32177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3842 - 3.4558 1.00 2905 151 0.1672 0.1806 REMARK 3 2 3.4558 - 2.7432 1.00 2773 148 0.1786 0.1979 REMARK 3 3 2.7432 - 2.3965 0.99 2719 146 0.1815 0.1841 REMARK 3 4 2.3965 - 2.1774 1.00 2717 142 0.1780 0.2278 REMARK 3 5 2.1774 - 2.0213 1.00 2692 151 0.1812 0.2236 REMARK 3 6 2.0213 - 1.9021 1.00 2723 134 0.1926 0.2357 REMARK 3 7 1.9021 - 1.8069 1.00 2677 144 0.2115 0.2408 REMARK 3 8 1.8069 - 1.7282 0.85 2297 113 0.2293 0.2739 REMARK 3 9 1.7282 - 1.6617 0.80 2177 121 0.2509 0.3578 REMARK 3 10 1.6617 - 1.6044 0.77 1725 94 0.2716 0.2789 REMARK 3 11 1.6044 - 1.5542 0.99 2506 128 0.2852 0.2904 REMARK 3 12 1.5542 - 1.5098 1.00 2656 138 0.3405 0.3793 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1987 REMARK 3 ANGLE : 0.781 2697 REMARK 3 CHIRALITY : 0.058 291 REMARK 3 PLANARITY : 0.006 349 REMARK 3 DIHEDRAL : 15.049 1182 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3452 22.8905 -10.4071 REMARK 3 T TENSOR REMARK 3 T11: 0.4263 T22: 0.4086 REMARK 3 T33: 0.7085 T12: -0.0278 REMARK 3 T13: 0.0034 T23: 0.0872 REMARK 3 L TENSOR REMARK 3 L11: 3.3450 L22: 4.8070 REMARK 3 L33: 4.1771 L12: 3.2532 REMARK 3 L13: -2.8502 L23: -4.4354 REMARK 3 S TENSOR REMARK 3 S11: -0.2479 S12: 0.7634 S13: 0.3373 REMARK 3 S21: 0.0156 S22: 0.0142 S23: -0.0960 REMARK 3 S31: -0.5684 S32: 0.6202 S33: 0.3854 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4452 2.5300 2.2397 REMARK 3 T TENSOR REMARK 3 T11: 0.1940 T22: 0.2192 REMARK 3 T33: 0.2444 T12: 0.0160 REMARK 3 T13: 0.0043 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.2125 L22: 2.2693 REMARK 3 L33: 1.2408 L12: 2.5430 REMARK 3 L13: -0.1273 L23: -0.2189 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: 0.0336 S13: 0.0278 REMARK 3 S21: 0.1718 S22: -0.0951 S23: 0.2235 REMARK 3 S31: 0.0518 S32: -0.1923 S33: 0.0827 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0620 5.1800 -3.8719 REMARK 3 T TENSOR REMARK 3 T11: 0.1588 T22: 0.1792 REMARK 3 T33: 0.2647 T12: 0.0211 REMARK 3 T13: -0.0077 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.3949 L22: 0.9844 REMARK 3 L33: 1.6017 L12: -0.3022 REMARK 3 L13: 0.0564 L23: -0.2047 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: 0.1137 S13: 0.0512 REMARK 3 S21: 0.0026 S22: -0.0644 S23: -0.1366 REMARK 3 S31: -0.0005 S32: 0.0111 S33: 0.0575 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4494 3.5337 -5.7886 REMARK 3 T TENSOR REMARK 3 T11: 0.1233 T22: 0.1929 REMARK 3 T33: 0.2085 T12: 0.0176 REMARK 3 T13: -0.0022 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.2465 L22: 6.9389 REMARK 3 L33: 1.6746 L12: 1.6007 REMARK 3 L13: 0.0689 L23: -0.5920 REMARK 3 S TENSOR REMARK 3 S11: -0.0143 S12: 0.1251 S13: 0.0199 REMARK 3 S21: -0.0355 S22: 0.0307 S23: 0.5242 REMARK 3 S31: 0.1202 S32: -0.1778 S33: -0.0523 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6644 -11.1680 5.0894 REMARK 3 T TENSOR REMARK 3 T11: 0.2936 T22: 0.1949 REMARK 3 T33: 0.3381 T12: 0.0465 REMARK 3 T13: 0.0230 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 3.2881 L22: 0.6361 REMARK 3 L33: 4.3186 L12: -1.2328 REMARK 3 L13: 0.1291 L23: -0.4657 REMARK 3 S TENSOR REMARK 3 S11: -0.2684 S12: -0.2071 S13: -0.5487 REMARK 3 S21: 0.0106 S22: 0.1214 S23: -0.1776 REMARK 3 S31: 0.4289 S32: 0.1224 S33: 0.0244 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6056 -0.0109 -11.9131 REMARK 3 T TENSOR REMARK 3 T11: 0.2415 T22: 0.2283 REMARK 3 T33: 0.2988 T12: 0.0546 REMARK 3 T13: 0.0405 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.9111 L22: 5.9915 REMARK 3 L33: 6.5750 L12: -0.9171 REMARK 3 L13: -0.9999 L23: -2.8560 REMARK 3 S TENSOR REMARK 3 S11: 0.2502 S12: 0.3207 S13: 0.1543 REMARK 3 S21: -0.4756 S22: -0.2454 S23: -0.3324 REMARK 3 S31: 0.0869 S32: 0.2086 S33: -0.0269 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9214 0.6353 -11.2088 REMARK 3 T TENSOR REMARK 3 T11: 0.2134 T22: 0.2105 REMARK 3 T33: 0.2672 T12: 0.0136 REMARK 3 T13: -0.0072 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.5222 L22: 4.0215 REMARK 3 L33: 3.0899 L12: -1.9429 REMARK 3 L13: 0.8321 L23: -2.6071 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: 0.2715 S13: 0.1208 REMARK 3 S21: -0.0176 S22: -0.1801 S23: -0.3025 REMARK 3 S31: 0.0543 S32: 0.0696 S33: 0.0570 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2276 4.0729 6.6487 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.1208 REMARK 3 T33: 0.3097 T12: 0.0623 REMARK 3 T13: -0.0346 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 2.9342 L22: 1.1186 REMARK 3 L33: 7.8552 L12: 1.0085 REMARK 3 L13: -2.3327 L23: -1.8236 REMARK 3 S TENSOR REMARK 3 S11: -0.0535 S12: -0.3323 S13: 0.0594 REMARK 3 S21: 0.3319 S22: -0.0687 S23: -0.2032 REMARK 3 S31: -0.2437 S32: 0.3073 S33: 0.0120 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7362 11.7188 -5.8494 REMARK 3 T TENSOR REMARK 3 T11: 0.2686 T22: 0.3199 REMARK 3 T33: 0.3995 T12: 0.0127 REMARK 3 T13: -0.0094 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 3.5912 L22: 1.8035 REMARK 3 L33: 4.9005 L12: 1.1805 REMARK 3 L13: -3.2518 L23: -1.2481 REMARK 3 S TENSOR REMARK 3 S11: -0.1158 S12: 0.0745 S13: 0.0852 REMARK 3 S21: -0.3604 S22: 0.0009 S23: -0.2753 REMARK 3 S31: 0.0051 S32: 0.4037 S33: -0.0735 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PFR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242387. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32194 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 39.371 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.01152 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.35370 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5DTX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.76 M AMMONIUM SULFATE, 0.1 M HEPES; REMARK 280 CRYOPROTECTANT 1 M SUCROSE, 1.7 M AMMONIUM SULFATE, 0.1 M HEPES., REMARK 280 PH 8.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.34950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.79550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.24450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.79550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.34950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.24450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ARG A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A -2 OG1 CG2 REMARK 470 LYS A 157 CB CG CD CE NZ REMARK 470 GLN A 158 CG CD OE1 NE2 REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 ASP A 174 CB CG OD1 OD2 REMARK 470 LYS A 215 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 118 O HOH A 301 2.11 REMARK 500 OE2 GLU A 143 O HOH A 302 2.13 REMARK 500 O HOH A 322 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 324 O HOH A 462 4455 2.08 REMARK 500 O HOH A 314 O HOH A 365 4555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 104 -157.94 -151.34 REMARK 500 SER A 176 -167.18 -78.77 REMARK 500 REMARK 500 REMARK: NULL DBREF 6PFR A -12 239 PDB 6PFR 6PFR -12 239 SEQRES 1 A 250 MET ARG GLY SER HIS HIS HIS HIS HIS HIS THR ASP PRO SEQRES 2 A 250 MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL SEQRES 3 A 250 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 4 A 250 LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SEQRES 5 A 250 TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY SEQRES 6 A 250 LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 7 A 250 OHD VAL LEU CYS PHE SER ARG TYR PRO ASP HIS MET LYS SEQRES 8 A 250 GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 9 A 250 VAL GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN SEQRES 10 A 250 TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR SEQRES 11 A 250 LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS SEQRES 12 A 250 GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN SEQRES 13 A 250 TYR ASN SER HIS ASN VAL TYR ILE MET ALA ASP LYS GLN SEQRES 14 A 250 LYS ASN GLY ILE LYS SER ASN PHE LYS ILE ARG HIS ASN SEQRES 15 A 250 ILE GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN SEQRES 16 A 250 GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO SEQRES 17 A 250 ASP ASN HIS TYR LEU SER THR GLN SER LYS LEU SER LYS SEQRES 18 A 250 ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU SEQRES 19 A 250 PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET ASP GLU SEQRES 20 A 250 LEU TYR LYS HET OHD A 68 21 HETNAM OHD {(4Z)-2-[(1S)-1-AMINOETHYL]-4-[(3-CHLORO-4- HETNAM 2 OHD HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H- HETNAM 3 OHD IMIDAZOL-1-YL}ACETIC ACID HETSYN OHD PEPTIDE DERIVED CHROMOPHORE FORMUL 1 OHD C14 H14 CL N3 O4 FORMUL 2 HOH *216(H2 O) HELIX 1 AA1 ASP A -1 THR A 10 1 12 HELIX 2 AA2 PRO A 57 VAL A 62 5 6 HELIX 3 AA3 VAL A 69 SER A 73 5 5 HELIX 4 AA4 PRO A 76 HIS A 82 5 7 HELIX 5 AA5 ASP A 83 ALA A 88 1 6 HELIX 6 AA6 LYS A 157 ASN A 160 5 4 HELIX 7 AA7 THR A 231 TYR A 238 1 8 SHEET 1 AA112 VAL A 13 VAL A 23 0 SHEET 2 AA112 HIS A 26 ASP A 37 -1 O PHE A 28 N GLY A 21 SHEET 3 AA112 LYS A 42 CYS A 49 -1 O LYS A 42 N ASP A 37 SHEET 4 AA112 HIS A 218 ALA A 228 -1 O LEU A 221 N LEU A 45 SHEET 5 AA112 HIS A 200 SER A 209 -1 N TYR A 201 O ALA A 228 SHEET 6 AA112 HIS A 149 ASP A 156 -1 N ILE A 153 O HIS A 200 SHEET 7 AA112 GLY A 161 ASN A 171 -1 O GLY A 161 N ASP A 156 SHEET 8 AA112 VAL A 177 PRO A 188 -1 O GLN A 184 N SER A 164 SHEET 9 AA112 TYR A 93 PHE A 101 -1 N VAL A 94 O THR A 187 SHEET 10 AA112 ASN A 106 GLU A 116 -1 O THR A 109 N ARG A 97 SHEET 11 AA112 THR A 119 ILE A 129 -1 O VAL A 121 N LYS A 114 SHEET 12 AA112 VAL A 13 VAL A 23 1 N GLU A 18 O ILE A 124 LINK C LEU A 65 N1 OHD A 68 1555 1555 1.32 LINK C3 OHD A 68 N VAL A 69 1555 1555 1.37 CISPEP 1 MET A 89 PRO A 90 0 1.54 CRYST1 50.699 62.489 67.591 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019724 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016003 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014795 0.00000