HEADER TRANSFERASE 01-JUL-19 6PME TITLE TRK-A IN COMPLEX WITH LIGAND CAVEAT 6PME RESIDUES ASP B 668 AND PHE B 669 THAT ARE NEXT TO EACH OTHER CAVEAT 2 6PME IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 6PME BETWEEN C AND N IS 0.75 RESIDUES GLY B 670 AND MET B 671 CAVEAT 4 6PME THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 6PME PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 1.19 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: NEUROTROPHIC TYROSINE KINASE RECEPTOR TYPE 1,TRK1- COMPND 5 TRANSFORMING TYROSINE KINASE PROTEIN,TROPOMYOSIN-RELATED KINASE A, COMPND 6 TYROSINE KINASE RECEPTOR,TYROSINE KINASE RECEPTOR A,TRK-A,GP140TRK, COMPND 7 P140-TRKA; COMPND 8 EC: 2.7.10.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NTRK1, MTC, TRK, TRKA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRK-A KINASE DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.SUBRAMANIAN,D.G.BROWN REVDAT 2 03-FEB-21 6PME 1 JRNL LINK REVDAT 1 26-FEB-20 6PME 0 JRNL AUTH G.SUBRAMANIAN,R.VAIRAGOUNDAR,S.J.BOWEN,N.ROUSH,T.ZACHARY, JRNL AUTH 2 C.JAVENS,T.WILLIAMS,A.JANSSEN,A.GONZALES JRNL TITL SYNTHETIC INHIBITOR LEADS OF HUMAN TROPOMYOSIN RECEPTOR JRNL TITL 2 KINASE A ( H TRKA). JRNL REF RSC MED CHEM V. 11 370 2020 JRNL REFN ESSN 2632-8682 JRNL PMID 33479642 JRNL DOI 10.1039/C9MD00554D REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 29475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.315 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.900 REMARK 3 FREE R VALUE TEST SET COUNT : 572 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2156 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3670 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6566 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 125 REMARK 3 SOLVENT ATOMS : 1 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.50000 REMARK 3 B22 (A**2) : 1.70000 REMARK 3 B33 (A**2) : 0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.196 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.459 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.897 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.822 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6812 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6312 ; 0.034 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9212 ; 1.866 ; 1.644 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14518 ; 2.551 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 802 ; 8.785 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 384 ;33.897 ;20.234 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1112 ;16.555 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;17.836 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 822 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7560 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1579 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3241 ; 2.795 ; 4.488 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3240 ; 2.783 ; 4.487 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4032 ; 4.674 ; 6.711 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6PME COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000242729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30047 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 109.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.10M KH2PO4/ 0.10M NAH2PO4/ 0.1M REMARK 280 MES/NAOH PH = 6.00 AND 1.9M NACL (CRYO: 25% GLYCEROL IN REMARK 280 RESERVOIR), OR 18% (W/V) PEG 3350, 0.2M CACL2, 0.10M, MES PH = REMARK 280 6.50 (CRYO: DIRECT)., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 65.72200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.04250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.19900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 65.72200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.04250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.19900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 65.72200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.04250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.19900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 65.72200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.04250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.19900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 27250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 140070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -621.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 156.39800 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 156.39800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 485 REMARK 465 LEU A 486 REMARK 465 GLN A 487 REMARK 465 GLY A 488 REMARK 465 HIS A 489 REMARK 465 ILE A 490 REMARK 465 ILE A 491 REMARK 465 GLU A 492 REMARK 465 ASN A 493 REMARK 465 PRO A 494 REMARK 465 GLN A 495 REMARK 465 TYR A 496 REMARK 465 PHE A 497 REMARK 465 SER A 498 REMARK 465 ASP A 499 REMARK 465 LEU A 532 REMARK 465 LEU A 533 REMARK 465 PRO A 534 REMARK 465 GLU A 535 REMARK 465 GLN A 536 REMARK 465 ASP A 537 REMARK 465 ALA A 608 REMARK 465 LYS A 609 REMARK 465 LEU A 610 REMARK 465 LEU A 611 REMARK 465 ALA A 612 REMARK 465 GLY A 613 REMARK 465 GLY A 614 REMARK 465 GLU A 615 REMARK 465 ASP A 616 REMARK 465 VAL A 617 REMARK 465 ALA A 618 REMARK 465 PRO A 619 REMARK 465 GLY A 684 REMARK 465 GLY A 685 REMARK 465 ARG A 686 REMARK 465 PRO A 789 REMARK 465 VAL A 790 REMARK 465 TYR A 791 REMARK 465 LEU A 792 REMARK 465 ASP A 793 REMARK 465 VAL A 794 REMARK 465 LEU A 795 REMARK 465 GLY B 485 REMARK 465 LEU B 486 REMARK 465 GLN B 487 REMARK 465 GLY B 488 REMARK 465 HIS B 489 REMARK 465 ILE B 490 REMARK 465 ILE B 491 REMARK 465 GLU B 492 REMARK 465 ASN B 493 REMARK 465 PRO B 494 REMARK 465 GLN B 495 REMARK 465 TYR B 496 REMARK 465 PHE B 497 REMARK 465 SER B 498 REMARK 465 LEU B 532 REMARK 465 LEU B 533 REMARK 465 PRO B 534 REMARK 465 GLU B 535 REMARK 465 ASP B 607 REMARK 465 ALA B 608 REMARK 465 LYS B 609 REMARK 465 LEU B 610 REMARK 465 LEU B 611 REMARK 465 ALA B 612 REMARK 465 GLY B 613 REMARK 465 GLY B 614 REMARK 465 GLU B 615 REMARK 465 ASP B 616 REMARK 465 VAL B 617 REMARK 465 ALA B 618 REMARK 465 PRO B 619 REMARK 465 VAL B 683 REMARK 465 GLY B 684 REMARK 465 GLY B 685 REMARK 465 ARG B 686 REMARK 465 THR B 687 REMARK 465 LEU B 792 REMARK 465 ASP B 793 REMARK 465 VAL B 794 REMARK 465 LEU B 795 REMARK 465 GLY C 485 REMARK 465 LEU C 486 REMARK 465 GLN C 487 REMARK 465 GLY C 488 REMARK 465 HIS C 489 REMARK 465 ILE C 490 REMARK 465 ILE C 491 REMARK 465 GLU C 492 REMARK 465 ASN C 493 REMARK 465 PRO C 494 REMARK 465 GLN C 495 REMARK 465 TYR C 496 REMARK 465 PHE C 497 REMARK 465 SER C 498 REMARK 465 ASP C 499 REMARK 465 LEU C 533 REMARK 465 PRO C 534 REMARK 465 GLU C 535 REMARK 465 GLN C 536 REMARK 465 ASP C 537 REMARK 465 ALA C 608 REMARK 465 LYS C 609 REMARK 465 LEU C 610 REMARK 465 LEU C 611 REMARK 465 ALA C 612 REMARK 465 GLY C 613 REMARK 465 GLY C 614 REMARK 465 GLU C 615 REMARK 465 ASP C 616 REMARK 465 VAL C 617 REMARK 465 GLY C 684 REMARK 465 GLY C 685 REMARK 465 TYR C 791 REMARK 465 LEU C 792 REMARK 465 ASP C 793 REMARK 465 VAL C 794 REMARK 465 LEU C 795 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLY B 670 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 544 CE NZ REMARK 480 LYS A 547 CD CE NZ REMARK 480 GLN A 570 CD OE1 NE2 REMARK 480 GLN A 660 CD OE1 NE2 REMARK 480 PHE A 669 CG CD1 CD2 CE1 CE2 CZ REMARK 480 ARG A 682 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 703 CE NZ REMARK 480 ILE A 740 CG1 CG2 CD1 REMARK 480 GLN A 769 CG CD OE1 NE2 REMARK 480 LYS B 544 CD CE NZ REMARK 480 LYS B 547 CD CE NZ REMARK 480 PHE B 669 N CA C O CG CD1 CD2 REMARK 480 PHE B 669 CE1 CE2 CZ REMARK 480 ILE B 740 CD1 REMARK 480 PHE C 521 CG CD1 CD2 CE1 CE2 CZ REMARK 480 LYS C 544 CE NZ REMARK 480 LYS C 547 CG CD CE NZ REMARK 480 PHE C 669 CG CD1 CD2 CE1 CE2 CZ REMARK 480 ARG C 682 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 668 N PHE B 669 1.47 REMARK 500 OE1 GLU B 515 OE1 GLU B 518 2.14 REMARK 500 OD2 ASP C 650 OH TYR C 680 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 570 CG GLN A 570 CD 0.224 REMARK 500 GLY A 595 C GLY A 595 O 0.136 REMARK 500 ARG A 682 CB ARG A 682 CG 0.191 REMARK 500 GLU A 745 CD GLU A 745 OE1 0.098 REMARK 500 GLU A 745 CD GLU A 745 OE2 0.068 REMARK 500 TYR A 757 C TYR A 757 O 0.131 REMARK 500 LYS B 544 CG LYS B 544 CD -0.215 REMARK 500 ASP B 668 C PHE B 669 N -0.585 REMARK 500 PHE B 669 CB PHE B 669 CG -0.167 REMARK 500 GLY B 670 C MET B 671 N -0.146 REMARK 500 PHE C 521 CB PHE C 521 CG 0.332 REMARK 500 LYS C 544 CD LYS C 544 CE 0.242 REMARK 500 GLY C 595 C GLY C 595 O -0.125 REMARK 500 PHE C 669 CB PHE C 669 CG 0.355 REMARK 500 ARG C 682 NE ARG C 682 CZ 0.256 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 501 CA - CB - SG ANGL. DEV. = -11.7 DEGREES REMARK 500 ARG A 507 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 PHE A 669 CB - CG - CD2 ANGL. DEV. = 10.8 DEGREES REMARK 500 PHE A 669 CB - CG - CD1 ANGL. DEV. = -12.0 DEGREES REMARK 500 ARG A 682 CA - CB - CG ANGL. DEV. = -21.0 DEGREES REMARK 500 ILE A 740 CA - CB - CG1 ANGL. DEV. = -13.3 DEGREES REMARK 500 ARG A 761 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 761 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 LYS B 544 CB - CG - CD ANGL. DEV. = 18.3 DEGREES REMARK 500 ASP B 668 CA - C - N ANGL. DEV. = 31.8 DEGREES REMARK 500 ASP B 668 O - C - N ANGL. DEV. = -33.5 DEGREES REMARK 500 PHE B 669 C - N - CA ANGL. DEV. = 17.3 DEGREES REMARK 500 PHE B 669 CB - CA - C ANGL. DEV. = 16.3 DEGREES REMARK 500 PHE B 669 N - CA - CB ANGL. DEV. = -18.9 DEGREES REMARK 500 PHE B 669 CA - CB - CG ANGL. DEV. = 20.2 DEGREES REMARK 500 PHE B 669 CB - CG - CD2 ANGL. DEV. = -13.6 DEGREES REMARK 500 PHE B 669 CB - CG - CD1 ANGL. DEV. = 11.1 DEGREES REMARK 500 MET B 671 C - N - CA ANGL. DEV. = 17.0 DEGREES REMARK 500 ILE B 740 CB - CG1 - CD1 ANGL. DEV. = 35.4 DEGREES REMARK 500 ARG C 507 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 PHE C 521 CA - CB - CG ANGL. DEV. = -18.9 DEGREES REMARK 500 PHE C 521 CB - CG - CD2 ANGL. DEV. = -14.2 DEGREES REMARK 500 PHE C 521 CB - CG - CD1 ANGL. DEV. = 13.3 DEGREES REMARK 500 PHE C 669 CA - CB - CG ANGL. DEV. = -15.1 DEGREES REMARK 500 PHE C 669 CB - CG - CD2 ANGL. DEV. = -20.8 DEGREES REMARK 500 PHE C 669 CB - CG - CD1 ANGL. DEV. = 20.4 DEGREES REMARK 500 ARG C 682 CD - NE - CZ ANGL. DEV. = -11.4 DEGREES REMARK 500 ARG C 682 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 682 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 549 64.11 -105.28 REMARK 500 GLN A 568 107.90 -172.34 REMARK 500 HIS A 604 38.98 -92.53 REMARK 500 PRO A 606 -1.43 -48.65 REMARK 500 PRO A 621 -157.51 -54.64 REMARK 500 ARG A 649 -21.90 87.37 REMARK 500 GLN A 660 142.74 -39.37 REMARK 500 ASP A 668 -101.22 -6.61 REMARK 500 PHE A 669 -79.47 -108.60 REMARK 500 ILE A 699 -74.43 -67.28 REMARK 500 ALA A 751 5.86 -65.42 REMARK 500 GLU B 548 -81.37 -44.51 REMARK 500 SER B 550 -170.85 -63.26 REMARK 500 HIS B 569 146.28 -172.65 REMARK 500 VAL B 573 112.39 -14.30 REMARK 500 ARG B 649 -16.40 82.71 REMARK 500 ASP B 650 54.96 -149.39 REMARK 500 ASP B 668 -93.70 -34.62 REMARK 500 ILE B 675 -77.66 -56.47 REMARK 500 ALA B 787 68.15 -154.59 REMARK 500 ASN C 531 -135.19 70.27 REMARK 500 GLU C 548 -92.85 -58.72 REMARK 500 ALA C 549 60.90 69.72 REMARK 500 SER C 550 -143.28 -67.85 REMARK 500 HIS C 604 47.54 -109.83 REMARK 500 PRO C 606 -15.74 -45.26 REMARK 500 ARG C 649 -15.29 89.79 REMARK 500 ASP C 650 44.39 -142.72 REMARK 500 ALA C 652 148.97 -177.67 REMARK 500 GLN C 660 122.85 -20.47 REMARK 500 ASP C 668 -158.90 27.01 REMARK 500 PHE C 669 -126.82 -47.91 REMARK 500 TYR C 676 63.01 -111.07 REMARK 500 ILE C 699 -73.11 -63.89 REMARK 500 PRO C 789 -91.80 -69.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 499 ALA B 500 147.55 REMARK 500 GLY B 522 LYS B 523 141.83 REMARK 500 GLY C 522 LYS C 523 148.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE B 669 0.08 SIDE CHAIN REMARK 500 ARG C 682 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP B 668 -22.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 501 SG REMARK 620 2 HIS C 504 NE2 68.7 REMARK 620 3 CYS C 579 SG 73.2 4.7 REMARK 620 4 GLU C 581 OE1 72.8 4.6 1.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 504 NE2 REMARK 620 2 CYS A 579 SG 107.6 REMARK 620 3 GLU A 581 OE1 103.4 126.0 REMARK 620 4 CYS B 501 SG 87.6 123.4 100.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 504 NE2 REMARK 620 2 CYS B 579 SG 109.3 REMARK 620 3 GLU B 581 OE1 102.7 124.2 REMARK 620 4 CYS C 501 SG 79.9 124.3 105.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOY A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SRT A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOY B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SRT B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOY C 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6PMA RELATED DB: PDB REMARK 900 RELATED ID: 6PMB RELATED DB: PDB REMARK 900 RELATED ID: 6PMC RELATED DB: PDB DBREF 6PME A 485 795 UNP P04629 NTRK1_HUMAN 387 697 DBREF 6PME B 485 795 UNP P04629 NTRK1_HUMAN 387 697 DBREF 6PME C 485 795 UNP P04629 NTRK1_HUMAN 387 697 SEQRES 1 A 311 GLY LEU GLN GLY HIS ILE ILE GLU ASN PRO GLN TYR PHE SEQRES 2 A 311 SER ASP ALA CYS VAL HIS HIS ILE LYS ARG ARG ASP ILE SEQRES 3 A 311 VAL LEU LYS TRP GLU LEU GLY GLU GLY ALA PHE GLY LYS SEQRES 4 A 311 VAL PHE LEU ALA GLU CYS HIS ASN LEU LEU PRO GLU GLN SEQRES 5 A 311 ASP LYS MET LEU VAL ALA VAL LYS ALA LEU LYS GLU ALA SEQRES 6 A 311 SER GLU SER ALA ARG GLN ASP PHE GLN ARG GLU ALA GLU SEQRES 7 A 311 LEU LEU THR MET LEU GLN HIS GLN HIS ILE VAL ARG PHE SEQRES 8 A 311 PHE GLY VAL CYS THR GLU GLY ARG PRO LEU LEU MET VAL SEQRES 9 A 311 PHE GLU TYR MET ARG HIS GLY ASP LEU ASN ARG PHE LEU SEQRES 10 A 311 ARG SER HIS GLY PRO ASP ALA LYS LEU LEU ALA GLY GLY SEQRES 11 A 311 GLU ASP VAL ALA PRO GLY PRO LEU GLY LEU GLY GLN LEU SEQRES 12 A 311 LEU ALA VAL ALA SER GLN VAL ALA ALA GLY MET VAL TYR SEQRES 13 A 311 LEU ALA GLY LEU HIS PHE VAL HIS ARG ASP LEU ALA THR SEQRES 14 A 311 ARG ASN CYS LEU VAL GLY GLN GLY LEU VAL VAL LYS ILE SEQRES 15 A 311 GLY ASP PHE GLY MET SER ARG ASP ILE TYR SEP THR ASP SEQRES 16 A 311 TYR TYR ARG VAL GLY GLY ARG THR MET LEU PRO ILE ARG SEQRES 17 A 311 TRP MET PRO PRO GLU SER ILE LEU TYR ARG LYS PHE THR SEQRES 18 A 311 THR GLU SER ASP VAL TRP SER PHE GLY VAL VAL LEU TRP SEQRES 19 A 311 GLU ILE PHE THR TYR GLY LYS GLN PRO TRP TYR GLN LEU SEQRES 20 A 311 SER ASN THR GLU ALA ILE ASP CYS ILE THR GLN GLY ARG SEQRES 21 A 311 GLU LEU GLU ARG PRO ARG ALA CYS PRO PRO GLU VAL TYR SEQRES 22 A 311 ALA ILE MET ARG GLY CYS TRP GLN ARG GLU PRO GLN GLN SEQRES 23 A 311 ARG HIS SER ILE LYS ASP VAL HIS ALA ARG LEU GLN ALA SEQRES 24 A 311 LEU ALA GLN ALA PRO PRO VAL TYR LEU ASP VAL LEU SEQRES 1 B 311 GLY LEU GLN GLY HIS ILE ILE GLU ASN PRO GLN TYR PHE SEQRES 2 B 311 SER ASP ALA CYS VAL HIS HIS ILE LYS ARG ARG ASP ILE SEQRES 3 B 311 VAL LEU LYS TRP GLU LEU GLY GLU GLY ALA PHE GLY LYS SEQRES 4 B 311 VAL PHE LEU ALA GLU CYS HIS ASN LEU LEU PRO GLU GLN SEQRES 5 B 311 ASP LYS MET LEU VAL ALA VAL LYS ALA LEU LYS GLU ALA SEQRES 6 B 311 SER GLU SER ALA ARG GLN ASP PHE GLN ARG GLU ALA GLU SEQRES 7 B 311 LEU LEU THR MET LEU GLN HIS GLN HIS ILE VAL ARG PHE SEQRES 8 B 311 PHE GLY VAL CYS THR GLU GLY ARG PRO LEU LEU MET VAL SEQRES 9 B 311 PHE GLU TYR MET ARG HIS GLY ASP LEU ASN ARG PHE LEU SEQRES 10 B 311 ARG SER HIS GLY PRO ASP ALA LYS LEU LEU ALA GLY GLY SEQRES 11 B 311 GLU ASP VAL ALA PRO GLY PRO LEU GLY LEU GLY GLN LEU SEQRES 12 B 311 LEU ALA VAL ALA SER GLN VAL ALA ALA GLY MET VAL TYR SEQRES 13 B 311 LEU ALA GLY LEU HIS PHE VAL HIS ARG ASP LEU ALA THR SEQRES 14 B 311 ARG ASN CYS LEU VAL GLY GLN GLY LEU VAL VAL LYS ILE SEQRES 15 B 311 GLY ASP PHE GLY MET SER ARG ASP ILE TYR SEP THR ASP SEQRES 16 B 311 TYR TYR ARG VAL GLY GLY ARG THR MET LEU PRO ILE ARG SEQRES 17 B 311 TRP MET PRO PRO GLU SER ILE LEU TYR ARG LYS PHE THR SEQRES 18 B 311 THR GLU SER ASP VAL TRP SER PHE GLY VAL VAL LEU TRP SEQRES 19 B 311 GLU ILE PHE THR TYR GLY LYS GLN PRO TRP TYR GLN LEU SEQRES 20 B 311 SER ASN THR GLU ALA ILE ASP CYS ILE THR GLN GLY ARG SEQRES 21 B 311 GLU LEU GLU ARG PRO ARG ALA CYS PRO PRO GLU VAL TYR SEQRES 22 B 311 ALA ILE MET ARG GLY CYS TRP GLN ARG GLU PRO GLN GLN SEQRES 23 B 311 ARG HIS SER ILE LYS ASP VAL HIS ALA ARG LEU GLN ALA SEQRES 24 B 311 LEU ALA GLN ALA PRO PRO VAL TYR LEU ASP VAL LEU SEQRES 1 C 311 GLY LEU GLN GLY HIS ILE ILE GLU ASN PRO GLN TYR PHE SEQRES 2 C 311 SER ASP ALA CYS VAL HIS HIS ILE LYS ARG ARG ASP ILE SEQRES 3 C 311 VAL LEU LYS TRP GLU LEU GLY GLU GLY ALA PHE GLY LYS SEQRES 4 C 311 VAL PHE LEU ALA GLU CYS HIS ASN LEU LEU PRO GLU GLN SEQRES 5 C 311 ASP LYS MET LEU VAL ALA VAL LYS ALA LEU LYS GLU ALA SEQRES 6 C 311 SER GLU SER ALA ARG GLN ASP PHE GLN ARG GLU ALA GLU SEQRES 7 C 311 LEU LEU THR MET LEU GLN HIS GLN HIS ILE VAL ARG PHE SEQRES 8 C 311 PHE GLY VAL CYS THR GLU GLY ARG PRO LEU LEU MET VAL SEQRES 9 C 311 PHE GLU TYR MET ARG HIS GLY ASP LEU ASN ARG PHE LEU SEQRES 10 C 311 ARG SER HIS GLY PRO ASP ALA LYS LEU LEU ALA GLY GLY SEQRES 11 C 311 GLU ASP VAL ALA PRO GLY PRO LEU GLY LEU GLY GLN LEU SEQRES 12 C 311 LEU ALA VAL ALA SER GLN VAL ALA ALA GLY MET VAL TYR SEQRES 13 C 311 LEU ALA GLY LEU HIS PHE VAL HIS ARG ASP LEU ALA THR SEQRES 14 C 311 ARG ASN CYS LEU VAL GLY GLN GLY LEU VAL VAL LYS ILE SEQRES 15 C 311 GLY ASP PHE GLY MET SER ARG ASP ILE TYR SEP THR ASP SEQRES 16 C 311 TYR TYR ARG VAL GLY GLY ARG THR MET LEU PRO ILE ARG SEQRES 17 C 311 TRP MET PRO PRO GLU SER ILE LEU TYR ARG LYS PHE THR SEQRES 18 C 311 THR GLU SER ASP VAL TRP SER PHE GLY VAL VAL LEU TRP SEQRES 19 C 311 GLU ILE PHE THR TYR GLY LYS GLN PRO TRP TYR GLN LEU SEQRES 20 C 311 SER ASN THR GLU ALA ILE ASP CYS ILE THR GLN GLY ARG SEQRES 21 C 311 GLU LEU GLU ARG PRO ARG ALA CYS PRO PRO GLU VAL TYR SEQRES 22 C 311 ALA ILE MET ARG GLY CYS TRP GLN ARG GLU PRO GLN GLN SEQRES 23 C 311 ARG HIS SER ILE LYS ASP VAL HIS ALA ARG LEU GLN ALA SEQRES 24 C 311 LEU ALA GLN ALA PRO PRO VAL TYR LEU ASP VAL LEU MODRES 6PME SEP A 677 SER MODIFIED RESIDUE MODRES 6PME SEP B 677 SER MODIFIED RESIDUE MODRES 6PME SEP C 677 SER MODIFIED RESIDUE HET SEP A 677 10 HET SEP B 677 10 HET SEP C 677 10 HET ZN A 801 1 HET OOY A 802 34 HET SRT A 803 10 HET ZN B 801 1 HET OOY B 802 34 HET SRT B 803 10 HET ZN C 801 1 HET OOY C 802 34 HETNAM SEP PHOSPHOSERINE HETNAM ZN ZINC ION HETNAM OOY N-[2,4-BIS(MORPHOLIN-4-YL)PHENYL]-3-PHENOXYBENZAMIDE HETNAM SRT S,R MESO-TARTARIC ACID HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 3(C3 H8 N O6 P) FORMUL 4 ZN 3(ZN 2+) FORMUL 5 OOY 3(C27 H29 N3 O4) FORMUL 6 SRT 2(C4 H6 O6) FORMUL 12 HOH *(H2 O) HELIX 1 AA1 LYS A 506 ARG A 508 5 3 HELIX 2 AA2 SER A 550 THR A 565 1 16 HELIX 3 AA3 LEU A 597 HIS A 604 1 8 HELIX 4 AA4 GLY A 623 LEU A 644 1 22 HELIX 5 AA5 ALA A 652 ARG A 654 5 3 HELIX 6 AA6 GLN A 660 LEU A 662 5 3 HELIX 7 AA7 MET A 671 TYR A 676 1 6 HELIX 8 AA8 SEP A 677 TYR A 680 5 4 HELIX 9 AA9 PRO A 690 MET A 694 5 5 HELIX 10 AB1 PRO A 695 LEU A 700 1 6 HELIX 11 AB2 THR A 705 THR A 722 1 18 HELIX 12 AB3 SER A 732 GLN A 742 1 11 HELIX 13 AB4 PRO A 753 TRP A 764 1 12 HELIX 14 AB5 SER A 773 ALA A 787 1 15 HELIX 15 AB6 LYS B 506 ARG B 508 5 3 HELIX 16 AB7 GLU B 551 THR B 565 1 15 HELIX 17 AB8 LEU B 597 HIS B 604 1 8 HELIX 18 AB9 GLY B 623 LEU B 644 1 22 HELIX 19 AC1 ALA B 652 ARG B 654 5 3 HELIX 20 AC2 GLN B 660 LEU B 662 5 3 HELIX 21 AC3 MET B 671 TYR B 676 1 6 HELIX 22 AC4 SEP B 677 TYR B 680 5 4 HELIX 23 AC5 PRO B 690 MET B 694 5 5 HELIX 24 AC6 PRO B 695 ARG B 702 1 8 HELIX 25 AC7 THR B 705 THR B 722 1 18 HELIX 26 AC8 SER B 732 GLY B 743 1 12 HELIX 27 AC9 PRO B 753 TRP B 764 1 12 HELIX 28 AD1 GLU B 767 ARG B 771 5 5 HELIX 29 AD2 SER B 773 ALA B 787 1 15 HELIX 30 AD3 LYS C 506 ARG C 508 5 3 HELIX 31 AD4 GLU C 551 THR C 565 1 15 HELIX 32 AD5 ASP C 596 HIS C 604 1 9 HELIX 33 AD6 GLY C 623 LEU C 644 1 22 HELIX 34 AD7 ALA C 652 ARG C 654 5 3 HELIX 35 AD8 GLN C 660 LEU C 662 5 3 HELIX 36 AD9 MET C 671 TYR C 676 1 6 HELIX 37 AE1 SEP C 677 TYR C 680 5 4 HELIX 38 AE2 PRO C 690 MET C 694 5 5 HELIX 39 AE3 PRO C 695 LEU C 700 1 6 HELIX 40 AE4 THR C 705 THR C 722 1 18 HELIX 41 AE5 SER C 732 GLY C 743 1 12 HELIX 42 AE6 PRO C 753 GLN C 765 1 13 HELIX 43 AE7 GLU C 767 ARG C 771 5 5 HELIX 44 AE8 SER C 773 ALA C 787 1 15 SHEET 1 AA1 5 ILE A 510 GLU A 518 0 SHEET 2 AA1 5 GLY A 522 CYS A 529 -1 O VAL A 524 N GLY A 517 SHEET 3 AA1 5 MET A 539 LEU A 546 -1 O MET A 539 N CYS A 529 SHEET 4 AA1 5 LEU A 585 GLU A 590 -1 O PHE A 589 N ALA A 542 SHEET 5 AA1 5 PHE A 575 CYS A 579 -1 N GLY A 577 O VAL A 588 SHEET 1 AA2 3 GLY A 595 ASP A 596 0 SHEET 2 AA2 3 CYS A 656 GLY A 659 -1 O VAL A 658 N GLY A 595 SHEET 3 AA2 3 VAL A 663 ILE A 666 -1 O LYS A 665 N LEU A 657 SHEET 1 AA3 5 ILE B 510 GLU B 518 0 SHEET 2 AA3 5 GLY B 522 HIS B 530 -1 O GLU B 528 N VAL B 511 SHEET 3 AA3 5 LYS B 538 LEU B 546 -1 O VAL B 543 N PHE B 525 SHEET 4 AA3 5 LEU B 585 GLU B 590 -1 O PHE B 589 N ALA B 542 SHEET 5 AA3 5 PHE B 575 CYS B 579 -1 N GLY B 577 O VAL B 588 SHEET 1 AA4 3 GLY B 595 ASP B 596 0 SHEET 2 AA4 3 CYS B 656 VAL B 658 -1 O VAL B 658 N GLY B 595 SHEET 3 AA4 3 VAL B 664 ILE B 666 -1 O LYS B 665 N LEU B 657 SHEET 1 AA5 5 ILE C 510 GLU C 518 0 SHEET 2 AA5 5 GLY C 522 CYS C 529 -1 O VAL C 524 N LEU C 516 SHEET 3 AA5 5 MET C 539 LEU C 546 -1 O MET C 539 N CYS C 529 SHEET 4 AA5 5 LEU C 585 GLU C 590 -1 O MET C 587 N LYS C 544 SHEET 5 AA5 5 PHE C 575 CYS C 579 -1 N GLY C 577 O VAL C 588 SHEET 1 AA6 2 CYS C 656 GLY C 659 0 SHEET 2 AA6 2 VAL C 663 ILE C 666 -1 O VAL C 663 N GLY C 659 LINK C TYR A 676 N SEP A 677 1555 1555 1.33 LINK C SEP A 677 N THR A 678 1555 1555 1.34 LINK C TYR B 676 N SEP B 677 1555 1555 1.33 LINK C SEP B 677 N THR B 678 1555 1555 1.34 LINK C TYR C 676 N SEP C 677 1555 1555 1.33 LINK C SEP C 677 N THR C 678 1555 1555 1.36 LINK SG CYS A 501 ZN ZN C 801 1555 3556 2.20 LINK NE2 HIS A 504 ZN ZN A 801 1555 1555 1.87 LINK SG CYS A 579 ZN ZN A 801 1555 1555 2.28 LINK OE1 GLU A 581 ZN ZN A 801 1555 1555 2.00 LINK ZN ZN A 801 SG CYS B 501 1555 1555 2.26 LINK NE2 HIS B 504 ZN ZN B 801 1555 1555 1.98 LINK SG CYS B 579 ZN ZN B 801 1555 1555 2.22 LINK OE1 GLU B 581 ZN ZN B 801 1555 1555 2.04 LINK ZN ZN B 801 SG CYS C 501 1555 1555 2.18 LINK NE2 HIS C 504 ZN ZN C 801 1555 1555 1.94 LINK SG CYS C 579 ZN ZN C 801 1555 1555 2.22 LINK OE1 GLU C 581 ZN ZN C 801 1555 1555 2.05 CISPEP 1 ARG A 583 PRO A 584 0 -3.93 CISPEP 2 ARG B 583 PRO B 584 0 -10.42 CISPEP 3 ARG C 583 PRO C 584 0 -1.31 CISPEP 4 ALA C 618 PRO C 619 0 20.43 SITE 1 AC1 4 HIS A 504 CYS A 579 GLU A 581 CYS B 501 SITE 1 AC2 14 LEU A 516 ALA A 542 PHE A 589 GLU A 590 SITE 2 AC2 14 TYR A 591 MET A 592 ARG A 593 GLY A 595 SITE 3 AC2 14 ASP A 596 ARG A 654 LEU A 657 GLY A 667 SITE 4 AC2 14 PHE A 669 GLY A 670 SITE 1 AC3 5 HIS A 571 SER A 632 GLN A 633 HIS A 778 SITE 2 AC3 5 GLN A 782 SITE 1 AC4 5 HIS B 504 ILE B 505 CYS B 579 GLU B 581 SITE 2 AC4 5 CYS C 501 SITE 1 AC5 9 ALA B 542 VAL B 573 PHE B 589 GLU B 590 SITE 2 AC5 9 TYR B 591 MET B 592 ARG B 593 LEU B 657 SITE 3 AC5 9 GLY B 667 SITE 1 AC6 8 HIS B 571 ALA B 629 SER B 632 GLN B 633 SITE 2 AC6 8 HIS B 778 GLN B 782 ALA B 785 PRO C 619 SITE 1 AC7 5 CYS A 501 HIS C 504 ILE C 505 CYS C 579 SITE 2 AC7 5 GLU C 581 SITE 1 AC8 13 LEU C 516 GLY C 517 ALA C 542 PHE C 589 SITE 2 AC8 13 GLU C 590 TYR C 591 MET C 592 ARG C 593 SITE 3 AC8 13 GLY C 595 LEU C 657 GLY C 667 PHE C 669 SITE 4 AC8 13 GLY C 670 CRYST1 131.444 152.085 156.398 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007608 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006394 0.00000