HEADER TRANSFERASE/TRANSFERASE INHIBITOR 02-JUL-19 6PNM TITLE HUMAN GSTO1-1 COMPLEXED WITH 2-CHLORO-N-(4-CHLORO-3- TITLE 2 (MORPHOLINOSULFONYL)PHENYL)ACETAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE OMEGA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSTO-1,GLUTATHIONE S-TRANSFERASE OMEGA 1-1,GSTO 1-1, COMPND 5 GLUTATHIONE-DEPENDENT DEHYDROASCORBATE REDUCTASE,MONOMETHYLARSONIC COMPND 6 ACID REDUCTASE,MMA(V) REDUCTASE,S-(PHENACYL)GLUTATHIONE REDUCTASE, COMPND 7 SPG-R; COMPND 8 EC: 2.5.1.18,1.8.5.1,1.20.4.2; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTO1, GSTTLP28; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHUE KEYWDS GLUTATHIONE TRANSFERASE, INHIBITOR, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.OAKLEY REVDAT 5 11-OCT-23 6PNM 1 REMARK REVDAT 4 08-APR-20 6PNM 1 JRNL REVDAT 3 11-MAR-20 6PNM 1 JRNL REVDAT 2 08-JAN-20 6PNM 1 REMARK REVDAT 1 24-JUL-19 6PNM 0 JRNL AUTH Y.XIE,P.TUMMALA,A.J.OAKLEY,G.S.DEORA,Y.NAKANO,M.ROOKE, JRNL AUTH 2 M.E.CUELLAR,J.M.STRASSER,J.L.DAHLIN,M.A.WALTERS, JRNL AUTH 3 M.G.CASAROTTO,P.G.BOARD,J.B.BAELL JRNL TITL DEVELOPMENT OF BENZENESULFONAMIDE DERIVATIVES AS POTENT JRNL TITL 2 GLUTATHIONE TRANSFERASE OMEGA-1 INHIBITORS. JRNL REF J.MED.CHEM. V. 63 2894 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32105470 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01391 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1215 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1697 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1917 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -1.72000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.761 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2129 ; 0.020 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1954 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2896 ; 2.181 ; 1.679 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4570 ; 1.557 ; 1.605 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 264 ;11.796 ; 5.360 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;30.768 ;23.196 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 369 ;14.330 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;21.711 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 258 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2609 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 992 ; 1.734 ; 1.693 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 991 ; 1.735 ; 1.693 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1243 ; 2.644 ; 2.532 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1244 ; 2.643 ; 2.533 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 2.692 ; 2.080 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1134 ; 2.693 ; 2.076 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1646 ; 4.030 ; 2.997 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2603 ; 7.216 ;22.898 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2520 ; 7.088 ;21.789 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1665 14.4957 42.8598 REMARK 3 T TENSOR REMARK 3 T11: 0.0607 T22: 0.0497 REMARK 3 T33: 0.0716 T12: 0.0011 REMARK 3 T13: -0.0022 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.4713 L22: 0.5707 REMARK 3 L33: 0.6040 L12: -0.2363 REMARK 3 L13: -0.1930 L23: -0.0139 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: 0.0367 S13: -0.0012 REMARK 3 S21: 0.0297 S22: -0.0083 S23: 0.0493 REMARK 3 S31: -0.0377 S32: -0.0828 S33: 0.0057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6PNM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000242437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29406 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: PDB ENTRY 1EEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7-2.2 M AMMONIUM SULFATE, 100 MM REMARK 280 SODIUM CITRATE, 0.1 M SODIUM POTASSIUM TARTRATE, 0.75 MM ZINC REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.61667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.23333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.23333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.61667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 93.23333 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1144 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 LYS A 11 NZ REMARK 470 GLN A 231 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 227 O HOH A 1101 1.46 REMARK 500 OE1 GLU A 227 O HOH A 1102 1.66 REMARK 500 OE2 GLU A 91 O HOH A 1103 1.77 REMARK 500 NE2 GLN A 223 O HOH A 1104 1.88 REMARK 500 O HOH A 1196 O HOH A 1333 1.96 REMARK 500 OD1 ASN A 190 O HOH A 1105 1.97 REMARK 500 OE1 GLU A 118 O HOH A 1106 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1168 O HOH A 1272 6655 1.96 REMARK 500 O HOH A 1220 O HOH A 1259 2655 2.07 REMARK 500 O HOH A 1342 O HOH A 1346 5555 2.14 REMARK 500 O HOH A 1306 O HOH A 1325 5565 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 91 CD GLU A 91 OE2 -0.103 REMARK 500 THR A 163 C THR A 163 O 0.126 REMARK 500 GLU A 191 CD GLU A 191 OE2 0.069 REMARK 500 LEU A 226 C LEU A 226 O 0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 30 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLU A 61 CB - CG - CD ANGL. DEV. = 16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 58 61.35 -158.99 REMARK 500 GLU A 85 118.52 85.43 REMARK 500 GLU A 85 121.27 81.81 REMARK 500 ASN A 232 35.80 73.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XX0 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 1006 DBREF 6PNM A 2 241 UNP P78417 GSTO1_HUMAN 2 241 SEQRES 1 A 240 SER GLY GLU SER ALA ARG SER LEU GLY LYS GLY SER ALA SEQRES 2 A 240 PRO PRO GLY PRO VAL PRO GLU GLY SER ILE ARG ILE TYR SEQRES 3 A 240 SER MET ARG PHE CYS PRO PHE ALA GLU ARG THR ARG LEU SEQRES 4 A 240 VAL LEU LYS ALA LYS GLY ILE ARG HIS GLU VAL ILE ASN SEQRES 5 A 240 ILE ASN LEU LYS ASN LYS PRO GLU TRP PHE PHE LYS LYS SEQRES 6 A 240 ASN PRO PHE GLY LEU VAL PRO VAL LEU GLU ASN SER GLN SEQRES 7 A 240 GLY GLN LEU ILE TYR GLU SER ALA ILE THR CYS GLU TYR SEQRES 8 A 240 LEU ASP GLU ALA TYR PRO GLY LYS LYS LEU LEU PRO ASP SEQRES 9 A 240 ASP PRO TYR GLU LYS ALA CYS GLN LYS MET ILE LEU GLU SEQRES 10 A 240 LEU PHE SER LYS VAL PRO SER LEU VAL GLY SER PHE ILE SEQRES 11 A 240 ARG SER GLN ASN LYS GLU ASP TYR ALA GLY LEU LYS GLU SEQRES 12 A 240 GLU PHE ARG LYS GLU PHE THR LYS LEU GLU GLU VAL LEU SEQRES 13 A 240 THR ASN LYS LYS THR THR PHE PHE GLY GLY ASN SER ILE SEQRES 14 A 240 SER MET ILE ASP TYR LEU ILE TRP PRO TRP PHE GLU ARG SEQRES 15 A 240 LEU GLU ALA MET LYS LEU ASN GLU CYS VAL ASP HIS THR SEQRES 16 A 240 PRO LYS LEU LYS LEU TRP MET ALA ALA MET LYS GLU ASP SEQRES 17 A 240 PRO THR VAL SER ALA LEU LEU THR SER GLU LYS ASP TRP SEQRES 18 A 240 GLN GLY PHE LEU GLU LEU TYR LEU GLN ASN SER PRO GLU SEQRES 19 A 240 ALA CYS ASP TYR GLY LEU HET XX0 A1001 40 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HET TLA A1006 10 HETNAM XX0 2-CHLORO-N-{4-CHLORO-3-[(MORPHOLIN-4-YL) HETNAM 2 XX0 SULFONYL]PHENYL}ACETAMIDE HETNAM SO4 SULFATE ION HETNAM TLA L(+)-TARTARIC ACID FORMUL 2 XX0 C12 H14 CL2 N2 O4 S FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 TLA C4 H6 O6 FORMUL 8 HOH *261(H2 O) HELIX 1 AA1 GLY A 3 ARG A 7 5 5 HELIX 2 AA2 CYS A 32 LYS A 45 1 14 HELIX 3 AA3 PRO A 60 LYS A 66 5 7 HELIX 4 AA4 GLU A 85 TYR A 97 1 13 HELIX 5 AA5 ASP A 106 PHE A 120 1 15 HELIX 6 AA6 LYS A 122 ILE A 131 1 10 HELIX 7 AA7 ASN A 135 LYS A 161 1 27 HELIX 8 AA8 SER A 171 ARG A 183 1 13 HELIX 9 AA9 LEU A 189 ASP A 194 5 6 HELIX 10 AB1 THR A 196 ASP A 209 1 14 HELIX 11 AB2 ASP A 209 LEU A 216 1 8 HELIX 12 AB3 SER A 218 GLN A 231 1 14 HELIX 13 AB4 GLU A 235 TYR A 239 5 5 SHEET 1 AA1 4 HIS A 49 ASN A 53 0 SHEET 2 AA1 4 ILE A 24 SER A 28 1 N ILE A 26 O ILE A 52 SHEET 3 AA1 4 VAL A 74 ASN A 77 -1 O VAL A 74 N TYR A 27 SHEET 4 AA1 4 LEU A 82 TYR A 84 -1 O ILE A 83 N LEU A 75 LINK SG ACYS A 32 C1 AXX0 A1001 1555 1555 1.80 LINK SG BCYS A 32 C1 BXX0 A1001 1555 1555 1.78 CISPEP 1 VAL A 72 PRO A 73 0 -2.95 SITE 1 AC1 18 MET A 29 PHE A 31 CYS A 32 PRO A 33 SITE 2 AC1 18 PHE A 34 LEU A 56 VAL A 72 VAL A 127 SITE 3 AC1 18 GLY A 128 ILE A 131 ARG A 183 TRP A 222 SITE 4 AC1 18 PHE A 225 LEU A 226 TYR A 229 TLA A1006 SITE 5 AC1 18 HOH A1152 HOH A1207 SITE 1 AC2 8 ARG A 39 HIS A 49 VAL A 51 HOH A1120 SITE 2 AC2 8 HOH A1147 HOH A1182 HOH A1231 HOH A1278 SITE 1 AC3 2 SER A 129 ARG A 132 SITE 1 AC4 6 GLU A 21 GLY A 22 SER A 78 GLN A 79 SITE 2 AC4 6 HOH A1153 HOH A1154 SITE 1 AC5 8 ARG A 30 LYS A 136 HOH A1111 HOH A1120 SITE 2 AC5 8 HOH A1178 HOH A1182 HOH A1185 HOH A1260 SITE 1 AC6 10 PHE A 34 LEU A 71 VAL A 72 PRO A 73 SITE 2 AC6 10 GLU A 85 SER A 86 XX0 A1001 HOH A1116 SITE 3 AC6 10 HOH A1117 HOH A1189 CRYST1 57.250 57.250 139.850 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017467 0.010085 0.000000 0.00000 SCALE2 0.000000 0.020169 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007151 0.00000