HEADER RIBOSOMAL PROTEIN 09-JUL-19 6PQG TITLE SOLUTION STRUCTURE OF OLVA(BC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLVA(BC); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES OLIVACEUS; SOURCE 3 ORGANISM_TAXID: 47716; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LANTHIPEPTIDE, RIPPS, RIBOSOMAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.Z.ACEDO,W.A.VAN DER DONK REVDAT 4 14-JUN-23 6PQG 1 REMARK REVDAT 3 18-DEC-19 6PQG 1 REMARK REVDAT 2 06-NOV-19 6PQG 1 JRNL REVDAT 1 23-OCT-19 6PQG 0 JRNL AUTH J.Z.ACEDO,I.R.BOTHWELL,L.AN,A.TROUTH,C.FRAZIER, JRNL AUTH 2 W.A.VAN DER DONK JRNL TITL O-METHYLTRANSFERASE-MEDIATED INCORPORATION OF A BETA-AMINO JRNL TITL 2 ACID IN LANTHIPEPTIDES. JRNL REF J.AM.CHEM.SOC. V. 141 16790 2019 JRNL REFN ESSN 1520-5126 JRNL PMID 31568727 JRNL DOI 10.1021/JACS.9B07396 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PQG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000242896. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : 30 REMARK 210 PRESSURE : 760 MMHG REMARK 210 SAMPLE CONTENTS : 2.5 MM NA OLVA(BC), 30 MM NA REMARK 210 SODIUM PHOSPHATE, 0.001 % NA DSS, REMARK 210 90% H2O/10% D2O; 2.5 MM NA REMARK 210 OLVA(BC), 30 MM NA SODIUM REMARK 210 PHOSPHATE, 0.001 % NA DSS, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRVIEW, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 2 CB ALA A 14 2.09 REMARK 500 SG CYS A 12 CB ALA A 18 2.09 REMARK 500 CB DBB A 11 SG CYS A 16 2.16 REMARK 500 CB DBB A 4 SG CYS A 8 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 8 171.07 -53.73 REMARK 500 1 CYS A 12 89.37 -66.26 REMARK 500 1 ALA A 13 -34.87 -178.33 REMARK 500 1 ALA A 14 -68.22 -162.81 REMARK 500 1 ALA A 18 -67.40 74.94 REMARK 500 2 CYS A 8 172.68 -55.40 REMARK 500 2 ALA A 13 -34.97 -178.26 REMARK 500 2 ALA A 14 -69.75 -152.85 REMARK 500 2 ALA A 18 -66.49 74.88 REMARK 500 3 ASP A 6 70.32 -165.19 REMARK 500 3 ALA A 13 -34.38 -178.67 REMARK 500 3 ALA A 14 -69.87 -153.28 REMARK 500 3 ALA A 18 -66.30 74.89 REMARK 500 4 CYS A 12 86.60 -67.58 REMARK 500 4 ALA A 13 -35.73 -174.11 REMARK 500 4 ALA A 14 -65.92 -162.60 REMARK 500 4 ALA A 18 -67.44 74.82 REMARK 500 5 CYS A 12 84.86 -66.87 REMARK 500 5 ALA A 13 -36.60 -172.13 REMARK 500 5 ALA A 14 -70.40 -166.55 REMARK 500 5 ALA A 18 -61.69 75.96 REMARK 500 6 CYS A 12 84.35 -66.96 REMARK 500 6 ALA A 13 -36.97 -171.13 REMARK 500 6 ALA A 14 -69.46 -166.15 REMARK 500 6 ALA A 18 -61.57 75.93 REMARK 500 7 ALA A 13 -35.06 -173.89 REMARK 500 7 ALA A 14 -71.40 -150.30 REMARK 500 7 SER A 15 -71.66 -55.98 REMARK 500 7 ALA A 18 -66.21 74.69 REMARK 500 8 CYS A 12 86.50 -65.06 REMARK 500 8 ALA A 13 -36.24 -174.33 REMARK 500 8 ALA A 14 -71.55 -165.92 REMARK 500 8 ALA A 18 -61.63 76.25 REMARK 500 9 ASP A 6 85.31 -163.09 REMARK 500 9 ALA A 13 -35.46 -174.36 REMARK 500 9 ALA A 14 -77.65 -152.75 REMARK 500 9 SER A 15 -75.85 -46.91 REMARK 500 9 ALA A 18 -62.21 76.05 REMARK 500 10 CYS A 12 85.21 -66.53 REMARK 500 10 ALA A 13 -36.52 -172.00 REMARK 500 10 ALA A 14 -69.33 -166.73 REMARK 500 10 ALA A 18 -61.87 75.87 REMARK 500 11 CYS A 12 90.20 -65.06 REMARK 500 11 ALA A 13 -34.25 -179.70 REMARK 500 11 ALA A 14 -69.77 -164.42 REMARK 500 11 ALA A 18 -67.40 75.01 REMARK 500 12 ASP A 6 66.48 61.55 REMARK 500 12 ALA A 9 -176.95 -66.58 REMARK 500 12 ALA A 13 -33.92 -179.94 REMARK 500 12 ALA A 14 -74.89 -149.39 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30631 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF OLVA(BC) DBREF 6PQG A 1 19 PDB 6PQG 6PQG 1 19 SEQRES 1 A 19 ALA CYS GLY DBB GLY ASP GLY CYS ALA LYS DBB CYS ALA SEQRES 2 A 19 ALA SER CYS ALA ALA SER HET DBB A 4 12 HET DBB A 11 12 HETNAM DBB D-ALPHA-AMINOBUTYRIC ACID FORMUL 1 DBB 2(C4 H9 N O2) LINK C GLY A 3 N DBB A 4 1555 1555 1.32 LINK C DBB A 4 N GLY A 5 1555 1555 1.33 LINK C LYS A 10 N DBB A 11 1555 1555 1.32 LINK C DBB A 11 N CYS A 12 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1