HEADER MOTOR PROTEIN 12-JUL-19 6PSE TITLE COMPLEX OF BICD2 WITH A DYNEIN LIGHT INTERMEDIATE CHAIN PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN BICAUDAL D HOMOLOG 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BIC-D 2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CYTOPLASMIC DYNEIN 1 LIGHT INTERMEDIATE CHAIN 1; COMPND 8 CHAIN: C; COMPND 9 SYNONYM: LIC1,DYNEIN LIGHT CHAIN A,DLC-A,DYNEIN LIGHT INTERMEDIATE COMPND 10 CHAIN 1,CYTOSOLIC; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BICD2, KIAA0699; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS EFFECTOR, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.DOMINGUEZ,I.G.LEE REVDAT 2 28-JUL-21 6PSE 1 JRNL REVDAT 1 15-JUL-20 6PSE 0 JRNL AUTH I.G.LEE,S.E.CASON,S.S.ALQASSIM,E.L.F.HOLZBAUR,R.DOMINGUEZ JRNL TITL A TUNABLE LIC1-ADAPTOR INTERACTION MODULATES DYNEIN ACTIVITY JRNL TITL 2 IN A CARGO-SPECIFIC MANNER. JRNL REF NAT COMMUN V. 11 5695 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 33173051 JRNL DOI 10.1038/S41467-020-19538-7 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.2 REMARK 3 NUMBER OF REFLECTIONS : 14423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0800 - 4.1096 0.99 3879 214 0.1768 0.2197 REMARK 3 2 4.1096 - 3.2628 0.98 3894 203 0.1766 0.2501 REMARK 3 3 3.2628 - 2.8506 0.79 3130 165 0.2307 0.2795 REMARK 3 4 2.8506 - 2.5900 0.48 1881 101 0.2475 0.2750 REMARK 3 5 2.5900 - 2.4044 0.23 907 49 0.2367 0.3304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.3100 30.0461 37.5706 REMARK 3 T TENSOR REMARK 3 T11: 0.4510 T22: 0.5060 REMARK 3 T33: 0.3151 T12: -0.1126 REMARK 3 T13: 0.0588 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 3.7330 L22: 3.8682 REMARK 3 L33: 3.9497 L12: -1.1307 REMARK 3 L13: 1.7059 L23: 2.7855 REMARK 3 S TENSOR REMARK 3 S11: 0.1834 S12: -0.3812 S13: -0.8224 REMARK 3 S21: 0.9917 S22: -0.2776 S23: 1.0373 REMARK 3 S31: 0.6455 S32: -1.3657 S33: -0.0515 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9828 41.4420 -1.9556 REMARK 3 T TENSOR REMARK 3 T11: 0.3790 T22: 0.2572 REMARK 3 T33: 0.2671 T12: 0.0911 REMARK 3 T13: -0.0668 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 1.4925 L22: 0.2036 REMARK 3 L33: 5.0805 L12: 0.4345 REMARK 3 L13: 3.1034 L23: 0.3204 REMARK 3 S TENSOR REMARK 3 S11: -0.2594 S12: 0.1829 S13: 0.0716 REMARK 3 S21: -0.2618 S22: -0.0480 S23: 0.1633 REMARK 3 S31: -0.4391 S32: 0.3046 S33: 0.1865 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2322 50.7828 46.7108 REMARK 3 T TENSOR REMARK 3 T11: 0.8920 T22: 0.9865 REMARK 3 T33: 0.9892 T12: -0.0216 REMARK 3 T13: 0.2756 T23: -0.5706 REMARK 3 L TENSOR REMARK 3 L11: 3.7036 L22: -0.0005 REMARK 3 L33: 3.5895 L12: -0.0098 REMARK 3 L13: 3.6481 L23: -0.0097 REMARK 3 S TENSOR REMARK 3 S11: 0.4289 S12: -0.5955 S13: 1.8615 REMARK 3 S21: 0.0693 S22: 0.0368 S23: -0.1604 REMARK 3 S31: -2.6497 S32: -0.5243 S33: -0.4392 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1161 37.2072 3.3907 REMARK 3 T TENSOR REMARK 3 T11: 0.2324 T22: 0.2234 REMARK 3 T33: 0.3217 T12: 0.0164 REMARK 3 T13: 0.0440 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 2.4047 L22: 1.1481 REMARK 3 L33: 2.0212 L12: 0.0113 REMARK 3 L13: 4.4718 L23: 1.2087 REMARK 3 S TENSOR REMARK 3 S11: 0.2419 S12: -0.0989 S13: 0.0822 REMARK 3 S21: -0.1660 S22: -0.2709 S23: 0.2507 REMARK 3 S31: 0.6173 S32: -0.5533 S33: 0.1991 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5609 37.0716 -41.3075 REMARK 3 T TENSOR REMARK 3 T11: 1.2666 T22: 1.0004 REMARK 3 T33: 0.5822 T12: 0.2240 REMARK 3 T13: -0.0270 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 5.7429 L22: 5.3298 REMARK 3 L33: 7.9507 L12: 5.3906 REMARK 3 L13: -5.7248 L23: -6.1418 REMARK 3 S TENSOR REMARK 3 S11: 0.2454 S12: 0.1410 S13: 0.4648 REMARK 3 S21: 0.7641 S22: -0.1656 S23: 0.2681 REMARK 3 S31: 0.1341 S32: 1.4236 S33: -0.0732 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 441 THROUGH 452 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6009 44.8736 6.4437 REMARK 3 T TENSOR REMARK 3 T11: 0.6917 T22: 0.7058 REMARK 3 T33: 0.6771 T12: 0.3590 REMARK 3 T13: -0.1186 T23: -0.1592 REMARK 3 L TENSOR REMARK 3 L11: 2.3154 L22: 5.2664 REMARK 3 L33: 5.4062 L12: -1.9100 REMARK 3 L13: -2.9232 L23: -0.1073 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: -0.2226 S13: 0.8149 REMARK 3 S21: 0.1042 S22: -0.1133 S23: 0.8574 REMARK 3 S31: -1.0902 S32: -1.5722 S33: 0.3030 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000242998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97750 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V701.C3 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19602 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 49.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.12_2829 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% V/V 2-PROPANOL, 0.08M SODIUM REMARK 280 CITRATE TRIBASIC DEHYDRATE, PH 5.5, 18% W/V POLYETHYLENE GLYCOL REMARK 280 4,000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.38650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.84050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.92200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.84050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.38650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.92200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 PHE A 82 REMARK 465 GLY A 83 REMARK 465 GLN A 84 REMARK 465 ALA A 85 REMARK 465 HIS A 86 REMARK 465 THR A 87 REMARK 465 ASN A 88 REMARK 465 HIS A 89 REMARK 465 LYS A 90 REMARK 465 LYS A 91 REMARK 465 VAL A 92 REMARK 465 ALA A 93 REMARK 465 ALA A 94 REMARK 465 ASP A 95 REMARK 465 GLY A 96 REMARK 465 GLU A 97 REMARK 465 SER A 98 REMARK 465 GLY B -1 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 PRO B 4 REMARK 465 SER B 5 REMARK 465 GLU B 6 REMARK 465 GLU B 7 REMARK 465 GLU B 8 REMARK 465 GLU B 9 REMARK 465 TYR B 10 REMARK 465 ALA B 11 REMARK 465 ARG B 12 REMARK 465 ALA B 81 REMARK 465 PHE B 82 REMARK 465 GLY B 83 REMARK 465 GLN B 84 REMARK 465 ALA B 85 REMARK 465 HIS B 86 REMARK 465 THR B 87 REMARK 465 ASN B 88 REMARK 465 HIS B 89 REMARK 465 LYS B 90 REMARK 465 LYS B 91 REMARK 465 VAL B 92 REMARK 465 ALA B 93 REMARK 465 ALA B 94 REMARK 465 ASP B 95 REMARK 465 GLY B 96 REMARK 465 GLU B 97 REMARK 465 SER B 98 REMARK 465 ASN C 433 REMARK 465 MET C 434 REMARK 465 LYS C 435 REMARK 465 ALA C 436 REMARK 465 GLY C 437 REMARK 465 ALA C 438 REMARK 465 THR C 439 REMARK 465 SER C 440 REMARK 465 SER C 453 REMARK 465 LYS C 454 REMARK 465 LYS C 455 REMARK 465 THR C 456 REMARK 465 GLY C 457 REMARK 465 SER C 458 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO B 19 CD PRO B 19 N 0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 19 C - N - CD ANGL. DEV. = -15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 79 28.97 -75.65 REMARK 500 VAL B 14 69.85 -118.53 REMARK 500 GLU B 76 -51.84 68.53 REMARK 500 LEU B 78 94.10 -65.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 6PSE A 1 98 UNP Q8TD16 BICD2_HUMAN 1 98 DBREF 6PSE B 1 98 UNP Q8TD16 BICD2_HUMAN 1 98 DBREF 6PSE C 433 458 UNP Q9Y6G9 DC1L1_HUMAN 433 458 SEQADV 6PSE GLY A -1 UNP Q8TD16 EXPRESSION TAG SEQADV 6PSE GLY A 0 UNP Q8TD16 EXPRESSION TAG SEQADV 6PSE GLY B -1 UNP Q8TD16 EXPRESSION TAG SEQADV 6PSE GLY B 0 UNP Q8TD16 EXPRESSION TAG SEQRES 1 A 100 GLY GLY MSE SER ALA PRO SER GLU GLU GLU GLU TYR ALA SEQRES 2 A 100 ARG LEU VAL MSE GLU ALA GLN PRO GLU TRP LEU ARG ALA SEQRES 3 A 100 GLU VAL LYS ARG LEU SER HIS GLU LEU ALA GLU THR THR SEQRES 4 A 100 ARG GLU LYS ILE GLN ALA ALA GLU TYR GLY LEU ALA VAL SEQRES 5 A 100 LEU GLU GLU LYS HIS GLN LEU LYS LEU GLN PHE GLU GLU SEQRES 6 A 100 LEU GLU VAL ASP TYR GLU ALA ILE ARG SER GLU MSE GLU SEQRES 7 A 100 GLN LEU LYS GLU ALA PHE GLY GLN ALA HIS THR ASN HIS SEQRES 8 A 100 LYS LYS VAL ALA ALA ASP GLY GLU SER SEQRES 1 B 100 GLY GLY MSE SER ALA PRO SER GLU GLU GLU GLU TYR ALA SEQRES 2 B 100 ARG LEU VAL MSE GLU ALA GLN PRO GLU TRP LEU ARG ALA SEQRES 3 B 100 GLU VAL LYS ARG LEU SER HIS GLU LEU ALA GLU THR THR SEQRES 4 B 100 ARG GLU LYS ILE GLN ALA ALA GLU TYR GLY LEU ALA VAL SEQRES 5 B 100 LEU GLU GLU LYS HIS GLN LEU LYS LEU GLN PHE GLU GLU SEQRES 6 B 100 LEU GLU VAL ASP TYR GLU ALA ILE ARG SER GLU MSE GLU SEQRES 7 B 100 GLN LEU LYS GLU ALA PHE GLY GLN ALA HIS THR ASN HIS SEQRES 8 B 100 LYS LYS VAL ALA ALA ASP GLY GLU SER SEQRES 1 C 26 ASN MET LYS ALA GLY ALA THR SER GLU GLY VAL LEU ALA SEQRES 2 C 26 ASN PHE PHE ASN SER LEU LEU SER LYS LYS THR GLY SER MODRES 6PSE MSE A 15 MET MODIFIED RESIDUE MODRES 6PSE MSE A 75 MET MODIFIED RESIDUE MODRES 6PSE MSE B 15 MET MODIFIED RESIDUE MODRES 6PSE MSE B 75 MET MODIFIED RESIDUE HET MSE A 15 8 HET MSE A 75 8 HET MSE B 15 8 HET MSE B 75 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 4 HOH *42(H2 O) HELIX 1 AA1 SER A 5 ALA A 17 1 13 HELIX 2 AA2 GLN A 18 LYS A 79 1 62 HELIX 3 AA3 GLN B 18 MSE B 75 1 58 HELIX 4 AA4 GLY C 442 LEU C 451 1 10 LINK C VAL A 14 N MSE A 15 1555 1555 1.32 LINK C MSE A 15 N GLU A 16 1555 1555 1.34 LINK C GLU A 74 N MSE A 75 1555 1555 1.34 LINK C MSE A 75 N GLU A 76 1555 1555 1.33 LINK C VAL B 14 N MSE B 15 1555 1555 1.33 LINK C MSE B 15 N GLU B 16 1555 1555 1.34 LINK C GLU B 74 N MSE B 75 1555 1555 1.33 LINK C MSE B 75 N GLU B 76 1555 1555 1.34 CRYST1 54.773 61.844 81.681 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018257 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016170 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012243 0.00000