HEADER IMMUNE SYSTEM 18-JUL-19 6PUF TITLE STRUCTURE OF HUMAN MAIT A-F7 TCR IN COMPLEX WITH HUMAN MR1-5'D-5-OP-RU COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I-RELATED GENE COMPND 3 PROTEIN; COMPND 4 CHAIN: A, C; COMPND 5 SYNONYM: MHC CLASS I-RELATED GENE PROTEIN,CLASS I HISTOCOMPATIBILITY COMPND 6 ANTIGEN-LIKE PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 10 CHAIN: B, F; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HUMAN TCR ALPHA CHAIN; COMPND 14 CHAIN: D, G; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: HUMAN TCR BETA CHAIN; COMPND 18 CHAIN: E, H; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MAIT, MR1, METABLITE PRESENTATION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR W.AWAD,J.ROSSJOHN REVDAT 5 11-OCT-23 6PUF 1 REMARK LINK REVDAT 4 01-APR-20 6PUF 1 JRNL REVDAT 3 18-MAR-20 6PUF 1 JRNL REVDAT 2 11-MAR-20 6PUF 1 JRNL REVDAT 1 19-FEB-20 6PUF 0 JRNL AUTH W.AWAD,G.J.M.LER,W.XU,A.N.KELLER,J.Y.W.MAK,X.Y.LIM,L.LIU, JRNL AUTH 2 S.B.G.ECKLE,J.LE NOURS,J.MCCLUSKEY,A.J.CORBETT,D.P.FAIRLIE, JRNL AUTH 3 J.ROSSJOHN JRNL TITL THE MOLECULAR BASIS UNDERPINNING THE POTENCY AND SPECIFICITY JRNL TITL 2 OF MAIT CELL ANTIGENS. JRNL REF NAT.IMMUNOL. V. 21 400 2020 JRNL REFN ESSN 1529-2916 JRNL PMID 32123373 JRNL DOI 10.1038/S41590-020-0616-6 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 156877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PUF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000243084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 - 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 156885 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 47.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.11520 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.64360 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 4L4T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BTP (PH 6.0 - 6.5), 8-20% REMARK 280 PEG3350 AND 200 MM SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 108.01650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.90750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 108.01650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.90750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 190 REMARK 465 THR A 191 REMARK 465 PHE A 192 REMARK 465 PRO A 193 REMARK 465 GLY A 194 REMARK 465 VAL A 195 REMARK 465 ARG B 97 REMARK 465 ASP B 98 REMARK 465 MET B 99 REMARK 465 ASP C 247 REMARK 465 PRO C 248 REMARK 465 GLN C 249 REMARK 465 SER C 250 REMARK 465 SER C 251 REMARK 465 ASN C 252 REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 SER D 124 REMARK 465 LYS D 125 REMARK 465 SER D 126 REMARK 465 SER D 127 REMARK 465 ASP D 128 REMARK 465 LYS D 129 REMARK 465 SER D 178 REMARK 465 ASP D 179 REMARK 465 PHE D 180 REMARK 465 SER D 199 REMARK 465 PRO D 200 REMARK 465 GLU D 201 REMARK 465 SER D 202 REMARK 465 SER D 203 REMARK 465 MET E 0 REMARK 465 ASN E 1 REMARK 465 ALA E 2 REMARK 465 ARG E 243 REMARK 465 ALA E 244 REMARK 465 ASP E 245 REMARK 465 MET G 0 REMARK 465 GLY G 1 REMARK 465 SER G 202 REMARK 465 SER G 203 REMARK 465 MET H 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 17 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 78 CD CE NZ REMARK 470 ARG A 79 NE CZ NH1 NH2 REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 TYR A 211 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 ILE A 221 CG1 CG2 CD1 REMARK 470 VAL A 222 CG1 CG2 REMARK 470 GLN A 223 CG CD OE1 NE2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 GLN A 249 CG CD OE1 NE2 REMARK 470 LYS B 19 CE NZ REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 58 CE NZ REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 HIS C 17 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 216 CG CD CE NZ REMARK 470 GLU C 219 CG CD OE1 OE2 REMARK 470 GLN C 223 CG CD OE1 NE2 REMARK 470 GLN D 112 CG CD OE1 NE2 REMARK 470 ARG D 122 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 123 CG OD1 OD2 REMARK 470 GLN D 140 CG CD OE1 NE2 REMARK 470 ASN D 142 CG OD1 ND2 REMARK 470 SER D 144 OG REMARK 470 GLN D 145 CG CD OE1 NE2 REMARK 470 LYS D 147 CG CD CE NZ REMARK 470 ASP D 148 CG OD1 OD2 REMARK 470 SER D 149 OG REMARK 470 ASP D 155 OD1 OD2 REMARK 470 ARG D 162 CG CD NE CZ NH1 NH2 REMARK 470 MET D 164 CG SD CE REMARK 470 ASP D 165 CG OD1 OD2 REMARK 470 LYS D 177 CG CD CE NZ REMARK 470 ASN D 184 CG OD1 ND2 REMARK 470 ASN D 188 CG OD1 ND2 REMARK 470 SER D 189 OG REMARK 470 ILE D 190 CG1 CG2 CD1 REMARK 470 GLU D 193 CG CD OE1 OE2 REMARK 470 THR D 195 OG1 CG2 REMARK 470 LYS E 9 CG CD CE NZ REMARK 470 GLU E 116 CG CD OE1 OE2 REMARK 470 LYS E 119 CG CD CE NZ REMARK 470 GLU E 133 CG CD OE1 OE2 REMARK 470 ILE E 136 CG1 CG2 CD1 REMARK 470 LYS E 141 CG CD CE NZ REMARK 470 LYS E 165 CG CD CE NZ REMARK 470 GLN E 176 CG CD OE1 NE2 REMARK 470 ASN E 185 OD1 ND2 REMARK 470 ARG E 206 CG CD NE CZ NH1 NH2 REMARK 470 HIS E 208 CG ND1 CD2 CE1 NE2 REMARK 470 SER E 219 OG REMARK 470 GLU E 220 CG CD OE1 OE2 REMARK 470 ASN E 221 CG OD1 ND2 REMARK 470 GLU F 44 CG CD OE1 OE2 REMARK 470 LYS F 48 CG CD CE NZ REMARK 470 LYS F 58 CG CD CE NZ REMARK 470 GLU F 74 CG CD OE1 OE2 REMARK 470 LYS F 75 CG CD CE NZ REMARK 470 GLU G 56 CD OE1 OE2 REMARK 470 LYS G 76 CG CD CE NZ REMARK 470 GLN G 112 CG CD OE1 NE2 REMARK 470 ARG G 122 NE CZ NH1 NH2 REMARK 470 GLN G 145 CG CD OE1 NE2 REMARK 470 LYS G 147 CE NZ REMARK 470 GLU G 201 CG CD OE1 OE2 REMARK 470 ASN H 1 CG OD1 ND2 REMARK 470 LYS H 57 CE NZ REMARK 470 GLU H 59 CG CD OE1 OE2 REMARK 470 GLU H 108 OE1 OE2 REMARK 470 GLU H 133 CG CD OE1 OE2 REMARK 470 LYS H 165 CG CD CE NZ REMARK 470 GLN H 176 OE1 NE2 REMARK 470 LEU H 184 CG CD1 CD2 REMARK 470 GLU H 220 CG CD OE1 OE2 REMARK 470 ASP H 245 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG C 6 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS H 146 SG CYS H 211 2.02 REMARK 500 SG CYS H 146 SG CYS H 211 2.03 REMARK 500 O HOH A 632 O HOH A 649 2.09 REMARK 500 SG CYS H 146 SG CYS H 211 2.10 REMARK 500 OD1 ASP G 138 O HOH G 301 2.11 REMARK 500 O ILE B 92 O HOH B 101 2.11 REMARK 500 O HOH F 311 O HOH F 320 2.11 REMARK 500 O HOH A 644 O HOH G 580 2.12 REMARK 500 O HOH G 318 O HOH H 532 2.12 REMARK 500 O HOH D 343 O HOH D 419 2.12 REMARK 500 O HOH D 369 O HOH E 387 2.13 REMARK 500 O HOH A 665 O HOH A 680 2.14 REMARK 500 O HOH H 677 O HOH H 758 2.14 REMARK 500 O HOH G 318 O HOH G 477 2.15 REMARK 500 OD1 ASN B 21 O HOH B 102 2.15 REMARK 500 O HOH H 521 O HOH H 708 2.15 REMARK 500 O HOH A 487 O HOH G 532 2.16 REMARK 500 O HOH H 564 O HOH H 740 2.16 REMARK 500 OE1 GLN F 2 O HOH F 201 2.16 REMARK 500 O HOH A 564 O HOH A 637 2.17 REMARK 500 NE2 GLN G 19 O HOH G 302 2.17 REMARK 500 O HOH A 541 O HOH A 684 2.17 REMARK 500 O HOH F 229 O HOH F 336 2.17 REMARK 500 NH2 ARG A 41 O HOH A 401 2.17 REMARK 500 NH1 ARG A 41 O HOH A 402 2.18 REMARK 500 O LEU B 87 O HOH B 103 2.18 REMARK 500 O HOH E 412 O HOH E 445 2.18 REMARK 500 O HOH D 346 O HOH D 353 2.18 REMARK 500 O HOH G 343 O HOH G 520 2.18 REMARK 500 O HOH C 670 O HOH F 224 2.19 REMARK 500 O HOH C 567 O HOH C 666 2.19 REMARK 500 O HOH D 357 O HOH H 598 2.19 REMARK 500 O HOH C 624 O HOH H 639 2.19 REMARK 500 OE1 GLU G 193 O HOH G 303 2.19 REMARK 500 O HOH H 551 O HOH H 688 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 16 -168.70 -73.67 REMARK 500 ASP A 29 -127.07 54.14 REMARK 500 PHE A 119 -57.64 -126.52 REMARK 500 PRO B 32 -169.57 -76.48 REMARK 500 TRP B 60 -0.35 82.05 REMARK 500 ASP C 14 64.10 36.50 REMARK 500 ASP C 29 -129.46 54.81 REMARK 500 PHE C 119 -55.12 -127.92 REMARK 500 THR C 191 -106.87 -98.68 REMARK 500 ALA D 16 -154.43 -93.49 REMARK 500 ASP D 194 31.29 -86.29 REMARK 500 ILE E 46 -64.04 -90.32 REMARK 500 SER E 87 -177.57 -170.01 REMARK 500 PRO E 153 -166.42 -76.83 REMARK 500 PRO F 32 -167.44 -76.57 REMARK 500 TRP F 60 -0.62 73.07 REMARK 500 VAL G 50 -30.40 -144.75 REMARK 500 ASP G 115 58.04 -141.67 REMARK 500 PHE G 186 30.17 -99.85 REMARK 500 HIS H 168 -31.59 -132.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 2LJ A 301 REMARK 610 2LJ C 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA F 103 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN F 83 OD1 REMARK 620 2 HIS F 84 O 84.9 REMARK 620 3 LEU F 87 O 99.9 81.7 REMARK 620 4 HOH F 277 O 177.7 97.4 80.5 REMARK 620 5 HOH F 289 O 79.5 156.2 83.5 98.3 REMARK 620 6 HOH F 292 O 78.6 85.2 166.9 101.6 108.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR H 47 OH REMARK 620 2 PRO H 61 O 99.8 REMARK 620 3 TYR H 64 O 84.2 81.6 REMARK 620 4 HOH H 472 O 97.1 91.5 173.1 REMARK 620 5 HOH H 485 O 78.8 171.8 90.1 96.7 REMARK 620 6 HOH H 501 O 163.5 96.2 94.0 86.6 84.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LJ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LJ C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL F 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA F 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA H 302 DBREF 6PUF A 1 270 UNP Q95460 HMR1_HUMAN 23 292 DBREF 6PUF B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6PUF C 1 270 UNP Q95460 HMR1_HUMAN 23 292 DBREF 6PUF D 0 203 PDB 6PUF 6PUF 0 203 DBREF 6PUF E 0 245 PDB 6PUF 6PUF 0 245 DBREF 6PUF F 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6PUF G 0 203 PDB 6PUF 6PUF 0 203 DBREF 6PUF H 0 245 PDB 6PUF 6PUF 0 245 SEQADV 6PUF MET A 0 UNP Q95460 INITIATING METHIONINE SEQADV 6PUF SER A 261 UNP Q95460 CYS 283 CONFLICT SEQADV 6PUF MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 6PUF MET C 0 UNP Q95460 INITIATING METHIONINE SEQADV 6PUF SER C 261 UNP Q95460 CYS 283 CONFLICT SEQADV 6PUF MET F 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 271 MET ARG THR HIS SER LEU ARG TYR PHE ARG LEU GLY VAL SEQRES 2 A 271 SER ASP PRO ILE HIS GLY VAL PRO GLU PHE ILE SER VAL SEQRES 3 A 271 GLY TYR VAL ASP SER HIS PRO ILE THR THR TYR ASP SER SEQRES 4 A 271 VAL THR ARG GLN LYS GLU PRO ARG ALA PRO TRP MET ALA SEQRES 5 A 271 GLU ASN LEU ALA PRO ASP HIS TRP GLU ARG TYR THR GLN SEQRES 6 A 271 LEU LEU ARG GLY TRP GLN GLN MET PHE LYS VAL GLU LEU SEQRES 7 A 271 LYS ARG LEU GLN ARG HIS TYR ASN HIS SER GLY SER HIS SEQRES 8 A 271 THR TYR GLN ARG MET ILE GLY CYS GLU LEU LEU GLU ASP SEQRES 9 A 271 GLY SER THR THR GLY PHE LEU GLN TYR ALA TYR ASP GLY SEQRES 10 A 271 GLN ASP PHE LEU ILE PHE ASN LYS ASP THR LEU SER TRP SEQRES 11 A 271 LEU ALA VAL ASP ASN VAL ALA HIS THR ILE LYS GLN ALA SEQRES 12 A 271 TRP GLU ALA ASN GLN HIS GLU LEU LEU TYR GLN LYS ASN SEQRES 13 A 271 TRP LEU GLU GLU GLU CYS ILE ALA TRP LEU LYS ARG PHE SEQRES 14 A 271 LEU GLU TYR GLY LYS ASP THR LEU GLN ARG THR GLU PRO SEQRES 15 A 271 PRO LEU VAL ARG VAL ASN ARG LYS GLU THR PHE PRO GLY SEQRES 16 A 271 VAL THR ALA LEU PHE CYS LYS ALA HIS GLY PHE TYR PRO SEQRES 17 A 271 PRO GLU ILE TYR MET THR TRP MET LYS ASN GLY GLU GLU SEQRES 18 A 271 ILE VAL GLN GLU ILE ASP TYR GLY ASP ILE LEU PRO SER SEQRES 19 A 271 GLY ASP GLY THR TYR GLN ALA TRP ALA SER ILE GLU LEU SEQRES 20 A 271 ASP PRO GLN SER SER ASN LEU TYR SER CYS HIS VAL GLU SEQRES 21 A 271 HIS SER GLY VAL HIS MET VAL LEU GLN VAL PRO SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 271 MET ARG THR HIS SER LEU ARG TYR PHE ARG LEU GLY VAL SEQRES 2 C 271 SER ASP PRO ILE HIS GLY VAL PRO GLU PHE ILE SER VAL SEQRES 3 C 271 GLY TYR VAL ASP SER HIS PRO ILE THR THR TYR ASP SER SEQRES 4 C 271 VAL THR ARG GLN LYS GLU PRO ARG ALA PRO TRP MET ALA SEQRES 5 C 271 GLU ASN LEU ALA PRO ASP HIS TRP GLU ARG TYR THR GLN SEQRES 6 C 271 LEU LEU ARG GLY TRP GLN GLN MET PHE LYS VAL GLU LEU SEQRES 7 C 271 LYS ARG LEU GLN ARG HIS TYR ASN HIS SER GLY SER HIS SEQRES 8 C 271 THR TYR GLN ARG MET ILE GLY CYS GLU LEU LEU GLU ASP SEQRES 9 C 271 GLY SER THR THR GLY PHE LEU GLN TYR ALA TYR ASP GLY SEQRES 10 C 271 GLN ASP PHE LEU ILE PHE ASN LYS ASP THR LEU SER TRP SEQRES 11 C 271 LEU ALA VAL ASP ASN VAL ALA HIS THR ILE LYS GLN ALA SEQRES 12 C 271 TRP GLU ALA ASN GLN HIS GLU LEU LEU TYR GLN LYS ASN SEQRES 13 C 271 TRP LEU GLU GLU GLU CYS ILE ALA TRP LEU LYS ARG PHE SEQRES 14 C 271 LEU GLU TYR GLY LYS ASP THR LEU GLN ARG THR GLU PRO SEQRES 15 C 271 PRO LEU VAL ARG VAL ASN ARG LYS GLU THR PHE PRO GLY SEQRES 16 C 271 VAL THR ALA LEU PHE CYS LYS ALA HIS GLY PHE TYR PRO SEQRES 17 C 271 PRO GLU ILE TYR MET THR TRP MET LYS ASN GLY GLU GLU SEQRES 18 C 271 ILE VAL GLN GLU ILE ASP TYR GLY ASP ILE LEU PRO SER SEQRES 19 C 271 GLY ASP GLY THR TYR GLN ALA TRP ALA SER ILE GLU LEU SEQRES 20 C 271 ASP PRO GLN SER SER ASN LEU TYR SER CYS HIS VAL GLU SEQRES 21 C 271 HIS SER GLY VAL HIS MET VAL LEU GLN VAL PRO SEQRES 1 D 204 MET GLY GLN ASN ILE ASP GLN PRO THR GLU MET THR ALA SEQRES 2 D 204 THR GLU GLY ALA ILE VAL GLN ILE ASN CYS THR TYR GLN SEQRES 3 D 204 THR SER GLY PHE ASN GLY LEU PHE TRP TYR GLN GLN HIS SEQRES 4 D 204 ALA GLY GLU ALA PRO THR PHE LEU SER TYR ASN VAL LEU SEQRES 5 D 204 ASP GLY LEU GLU GLU LYS GLY ARG PHE SER SER PHE LEU SEQRES 6 D 204 SER ARG SER LYS GLY TYR SER TYR LEU LEU LEU LYS GLU SEQRES 7 D 204 LEU GLN MET LYS ASP SER ALA SER TYR LEU CYS ALA VAL SEQRES 8 D 204 LYS ASP SER ASN TYR GLN LEU ILE TRP GLY ALA GLY THR SEQRES 9 D 204 LYS LEU ILE ILE LYS PRO ASP ILE GLN ASN PRO ASP PRO SEQRES 10 D 204 ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SEQRES 11 D 204 SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN SEQRES 12 D 204 VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP SEQRES 13 D 204 LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER SEQRES 14 D 204 ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA SEQRES 15 D 204 CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP SEQRES 16 D 204 THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 E 246 MET ASN ALA GLY VAL THR GLN THR PRO LYS PHE GLN VAL SEQRES 2 E 246 LEU LYS THR GLY GLN SER MET THR LEU GLN CYS ALA GLN SEQRES 3 E 246 ASP MET ASN HIS ASN SER MET TYR TRP TYR ARG GLN ASP SEQRES 4 E 246 PRO GLY MET GLY LEU ARG LEU ILE TYR TYR SER ALA SER SEQRES 5 E 246 GLU GLY THR THR ASP LYS GLY GLU VAL PRO ASN GLY TYR SEQRES 6 E 246 ASN VAL SER ARG LEU ASN LYS ARG GLU PHE SER LEU ARG SEQRES 7 E 246 LEU GLU SER ALA ALA PRO SER GLN THR SER VAL TYR PHE SEQRES 8 E 246 CYS ALA SER SER VAL TRP THR GLY GLU GLY SER GLY GLU SEQRES 9 E 246 LEU PHE PHE GLY GLU GLY SER ARG LEU THR VAL LEU GLU SEQRES 10 E 246 ASP LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE SEQRES 11 E 246 GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA SEQRES 12 E 246 THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS SEQRES 13 E 246 VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SEQRES 14 E 246 SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN SEQRES 15 E 246 PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG SEQRES 16 E 246 LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN SEQRES 17 E 246 HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU SEQRES 18 E 246 ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR SEQRES 19 E 246 GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP SEQRES 1 F 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 F 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 F 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 F 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 F 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 F 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 F 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 F 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 G 204 MET GLY GLN ASN ILE ASP GLN PRO THR GLU MET THR ALA SEQRES 2 G 204 THR GLU GLY ALA ILE VAL GLN ILE ASN CYS THR TYR GLN SEQRES 3 G 204 THR SER GLY PHE ASN GLY LEU PHE TRP TYR GLN GLN HIS SEQRES 4 G 204 ALA GLY GLU ALA PRO THR PHE LEU SER TYR ASN VAL LEU SEQRES 5 G 204 ASP GLY LEU GLU GLU LYS GLY ARG PHE SER SER PHE LEU SEQRES 6 G 204 SER ARG SER LYS GLY TYR SER TYR LEU LEU LEU LYS GLU SEQRES 7 G 204 LEU GLN MET LYS ASP SER ALA SER TYR LEU CYS ALA VAL SEQRES 8 G 204 LYS ASP SER ASN TYR GLN LEU ILE TRP GLY ALA GLY THR SEQRES 9 G 204 LYS LEU ILE ILE LYS PRO ASP ILE GLN ASN PRO ASP PRO SEQRES 10 G 204 ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SEQRES 11 G 204 SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN SEQRES 12 G 204 VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP SEQRES 13 G 204 LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER SEQRES 14 G 204 ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA SEQRES 15 G 204 CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP SEQRES 16 G 204 THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 H 246 MET ASN ALA GLY VAL THR GLN THR PRO LYS PHE GLN VAL SEQRES 2 H 246 LEU LYS THR GLY GLN SER MET THR LEU GLN CYS ALA GLN SEQRES 3 H 246 ASP MET ASN HIS ASN SER MET TYR TRP TYR ARG GLN ASP SEQRES 4 H 246 PRO GLY MET GLY LEU ARG LEU ILE TYR TYR SER ALA SER SEQRES 5 H 246 GLU GLY THR THR ASP LYS GLY GLU VAL PRO ASN GLY TYR SEQRES 6 H 246 ASN VAL SER ARG LEU ASN LYS ARG GLU PHE SER LEU ARG SEQRES 7 H 246 LEU GLU SER ALA ALA PRO SER GLN THR SER VAL TYR PHE SEQRES 8 H 246 CYS ALA SER SER VAL TRP THR GLY GLU GLY SER GLY GLU SEQRES 9 H 246 LEU PHE PHE GLY GLU GLY SER ARG LEU THR VAL LEU GLU SEQRES 10 H 246 ASP LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE SEQRES 11 H 246 GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA SEQRES 12 H 246 THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS SEQRES 13 H 246 VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SEQRES 14 H 246 SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN SEQRES 15 H 246 PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG SEQRES 16 H 246 LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN SEQRES 17 H 246 HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU SEQRES 18 H 246 ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR SEQRES 19 H 246 GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP HET 2LJ A 301 21 HET GOL A 302 6 HET GOL A 303 6 HET 2LJ C 301 21 HET GOL C 302 6 HET GOL F 101 6 HET GOL F 102 6 HET NA F 103 1 HET GOL H 301 6 HET NA H 302 1 HETNAM 2LJ 1-DEOXY-1-({2,6-DIOXO-5-[(E)-PROPYLIDENEAMINO]-1,2,3,6- HETNAM 2 2LJ TETRAHYDROPYRIMIDIN-4-YL}AMINO)-D-RIBITOL HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN 2LJ 5-(2-OXOPROPYLIDENEAMINO)-6-D-RIBITYLAMINOURACIL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 9 2LJ 2(C12 H20 N4 O6) FORMUL 10 GOL 6(C3 H8 O3) FORMUL 16 NA 2(NA 1+) FORMUL 19 HOH *2000(H2 O) HELIX 1 AA1 ALA A 47 GLU A 52 1 6 HELIX 2 AA2 ALA A 55 ASN A 85 1 31 HELIX 3 AA3 ASP A 133 ALA A 145 1 13 HELIX 4 AA4 ASN A 146 GLU A 159 1 14 HELIX 5 AA5 GLU A 159 GLY A 172 1 14 HELIX 6 AA6 GLY A 172 GLN A 177 1 6 HELIX 7 AA7 ALA C 47 GLU C 52 1 6 HELIX 8 AA8 ALA C 55 ASN C 85 1 31 HELIX 9 AA9 ASP C 133 ALA C 145 1 13 HELIX 10 AB1 ASN C 146 GLU C 159 1 14 HELIX 11 AB2 GLU C 159 GLY C 172 1 14 HELIX 12 AB3 GLY C 172 GLN C 177 1 6 HELIX 13 AB4 GLN D 79 SER D 83 5 5 HELIX 14 AB5 ALA D 181 ALA D 185 5 5 HELIX 15 AB6 ALA E 82 THR E 86 5 5 HELIX 16 AB7 SER E 132 GLN E 140 1 9 HELIX 17 AB8 ALA E 199 ASN E 204 1 6 HELIX 18 AB9 GLN G 79 SER G 83 5 5 HELIX 19 AC1 ALA G 181 PHE G 186 1 6 HELIX 20 AC2 ALA H 82 THR H 86 5 5 HELIX 21 AC3 ASP H 117 VAL H 121 5 5 HELIX 22 AC4 SER H 132 GLN H 140 1 9 HELIX 23 AC5 ALA H 199 GLN H 203 1 5 SHEET 1 AA1 8 GLU A 44 PRO A 45 0 SHEET 2 AA1 8 HIS A 31 ASP A 37 -1 N THR A 35 O GLU A 44 SHEET 3 AA1 8 PHE A 22 VAL A 28 -1 N SER A 24 O TYR A 36 SHEET 4 AA1 8 HIS A 3 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 THR A 91 LEU A 100 -1 O LEU A 100 N HIS A 3 SHEET 6 AA1 8 THR A 106 TYR A 114 -1 O ALA A 113 N GLN A 93 SHEET 7 AA1 8 GLN A 117 ASN A 123 -1 O PHE A 122 N LEU A 110 SHEET 8 AA1 8 SER A 128 ALA A 131 -1 O LEU A 130 N ILE A 121 SHEET 1 AA2 4 LEU A 183 ARG A 188 0 SHEET 2 AA2 4 ALA A 197 PHE A 205 -1 O PHE A 199 N ASN A 187 SHEET 3 AA2 4 TYR A 238 GLU A 245 -1 O ALA A 242 N CYS A 200 SHEET 4 AA2 4 ILE A 225 TYR A 227 -1 N ASP A 226 O SER A 243 SHEET 1 AA3 4 LEU A 183 ARG A 188 0 SHEET 2 AA3 4 ALA A 197 PHE A 205 -1 O PHE A 199 N ASN A 187 SHEET 3 AA3 4 TYR A 238 GLU A 245 -1 O ALA A 242 N CYS A 200 SHEET 4 AA3 4 LEU A 231 PRO A 232 -1 N LEU A 231 O GLN A 239 SHEET 1 AA4 4 GLU A 219 GLU A 220 0 SHEET 2 AA4 4 TYR A 211 LYS A 216 -1 N LYS A 216 O GLU A 219 SHEET 3 AA4 4 TYR A 254 HIS A 260 -1 O GLU A 259 N TYR A 211 SHEET 4 AA4 4 VAL A 263 GLN A 268 -1 O MET A 265 N VAL A 258 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 8 GLU C 44 PRO C 45 0 SHEET 2 AA8 8 HIS C 31 ASP C 37 -1 N THR C 35 O GLU C 44 SHEET 3 AA8 8 PHE C 22 VAL C 28 -1 N GLY C 26 O ILE C 33 SHEET 4 AA8 8 HIS C 3 VAL C 12 -1 N ARG C 6 O TYR C 27 SHEET 5 AA8 8 THR C 91 LEU C 100 -1 O TYR C 92 N GLY C 11 SHEET 6 AA8 8 THR C 106 TYR C 114 -1 O ALA C 113 N GLN C 93 SHEET 7 AA8 8 GLN C 117 ASN C 123 -1 O LEU C 120 N TYR C 112 SHEET 8 AA8 8 SER C 128 ALA C 131 -1 O SER C 128 N ASN C 123 SHEET 1 AA9 4 LEU C 183 GLU C 190 0 SHEET 2 AA9 4 THR C 196 PHE C 205 -1 O ALA C 197 N LYS C 189 SHEET 3 AA9 4 TYR C 238 GLU C 245 -1 O ALA C 240 N ALA C 202 SHEET 4 AA9 4 ASP C 226 TYR C 227 -1 N ASP C 226 O SER C 243 SHEET 1 AB1 4 LEU C 183 GLU C 190 0 SHEET 2 AB1 4 THR C 196 PHE C 205 -1 O ALA C 197 N LYS C 189 SHEET 3 AB1 4 TYR C 238 GLU C 245 -1 O ALA C 240 N ALA C 202 SHEET 4 AB1 4 LEU C 231 PRO C 232 -1 N LEU C 231 O GLN C 239 SHEET 1 AB2 4 GLU C 219 GLU C 220 0 SHEET 2 AB2 4 TYR C 211 LYS C 216 -1 N LYS C 216 O GLU C 219 SHEET 3 AB2 4 TYR C 254 HIS C 260 -1 O HIS C 257 N THR C 213 SHEET 4 AB2 4 VAL C 263 GLN C 268 -1 O VAL C 263 N HIS C 260 SHEET 1 AB3 5 ASN D 3 ASP D 5 0 SHEET 2 AB3 5 VAL D 18 GLN D 25 -1 O THR D 23 N ASP D 5 SHEET 3 AB3 5 TYR D 70 LEU D 75 -1 O SER D 71 N CYS D 22 SHEET 4 AB3 5 PHE D 60 SER D 65 -1 N SER D 61 O LEU D 74 SHEET 5 AB3 5 GLY D 53 LYS D 57 -1 N LYS D 57 O PHE D 60 SHEET 1 AB4 5 GLU D 9 THR D 13 0 SHEET 2 AB4 5 THR D 103 LYS D 108 1 O ILE D 106 N MET D 10 SHEET 3 AB4 5 ALA D 84 LYS D 91 -1 N ALA D 84 O LEU D 105 SHEET 4 AB4 5 LEU D 32 GLN D 37 -1 N PHE D 33 O ALA D 89 SHEET 5 AB4 5 THR D 44 ASN D 49 -1 O ASN D 49 N LEU D 32 SHEET 1 AB5 4 GLU D 9 THR D 13 0 SHEET 2 AB5 4 THR D 103 LYS D 108 1 O ILE D 106 N MET D 10 SHEET 3 AB5 4 ALA D 84 LYS D 91 -1 N ALA D 84 O LEU D 105 SHEET 4 AB5 4 LEU D 97 TRP D 99 -1 O ILE D 98 N VAL D 90 SHEET 1 AB6 4 ALA D 117 LEU D 121 0 SHEET 2 AB6 4 VAL D 131 THR D 135 -1 O LEU D 133 N TYR D 119 SHEET 3 AB6 4 PHE D 166 SER D 175 -1 O ALA D 173 N CYS D 132 SHEET 4 AB6 4 VAL D 151 ILE D 153 -1 N TYR D 152 O TRP D 174 SHEET 1 AB7 4 ALA D 117 LEU D 121 0 SHEET 2 AB7 4 VAL D 131 THR D 135 -1 O LEU D 133 N TYR D 119 SHEET 3 AB7 4 PHE D 166 SER D 175 -1 O ALA D 173 N CYS D 132 SHEET 4 AB7 4 CYS D 157 MET D 161 -1 N CYS D 157 O SER D 170 SHEET 1 AB8 4 VAL E 4 THR E 7 0 SHEET 2 AB8 4 MET E 19 GLN E 25 -1 O ALA E 24 N THR E 5 SHEET 3 AB8 4 PHE E 74 LEU E 78 -1 O LEU E 76 N LEU E 21 SHEET 4 AB8 4 TYR E 64 ARG E 68 -1 N ASN E 65 O ARG E 77 SHEET 1 AB9 6 PHE E 10 LYS E 14 0 SHEET 2 AB9 6 SER E 110 LEU E 115 1 O LEU E 115 N LEU E 13 SHEET 3 AB9 6 SER E 87 SER E 94 -1 N TYR E 89 O SER E 110 SHEET 4 AB9 6 SER E 31 GLN E 37 -1 N TYR E 35 O PHE E 90 SHEET 5 AB9 6 ARG E 44 SER E 51 -1 O ILE E 46 N TRP E 34 SHEET 6 AB9 6 THR E 54 LYS E 57 -1 O ASP E 56 N TYR E 48 SHEET 1 AC1 4 PHE E 10 LYS E 14 0 SHEET 2 AC1 4 SER E 110 LEU E 115 1 O LEU E 115 N LEU E 13 SHEET 3 AC1 4 SER E 87 SER E 94 -1 N TYR E 89 O SER E 110 SHEET 4 AC1 4 PHE E 105 PHE E 106 -1 O PHE E 105 N SER E 93 SHEET 1 AC2 4 GLU E 125 PHE E 129 0 SHEET 2 AC2 4 LYS E 141 PHE E 151 -1 O THR E 149 N GLU E 125 SHEET 3 AC2 4 TYR E 189 SER E 198 -1 O SER E 193 N CYS E 146 SHEET 4 AC2 4 VAL E 171 THR E 173 -1 N CYS E 172 O ARG E 194 SHEET 1 AC3 4 GLU E 125 PHE E 129 0 SHEET 2 AC3 4 LYS E 141 PHE E 151 -1 O THR E 149 N GLU E 125 SHEET 3 AC3 4 TYR E 189 SER E 198 -1 O SER E 193 N CYS E 146 SHEET 4 AC3 4 LEU E 178 LYS E 179 -1 N LEU E 178 O ALA E 190 SHEET 1 AC4 4 LYS E 165 VAL E 167 0 SHEET 2 AC4 4 VAL E 156 VAL E 162 -1 N VAL E 162 O LYS E 165 SHEET 3 AC4 4 HIS E 208 PHE E 215 -1 O GLN E 212 N SER E 159 SHEET 4 AC4 4 GLN E 234 TRP E 241 -1 O GLN E 234 N PHE E 215 SHEET 1 AC5 4 LYS F 6 SER F 11 0 SHEET 2 AC5 4 ASN F 21 PHE F 30 -1 O SER F 28 N LYS F 6 SHEET 3 AC5 4 PHE F 62 PHE F 70 -1 O PHE F 70 N ASN F 21 SHEET 4 AC5 4 GLU F 50 HIS F 51 -1 N GLU F 50 O TYR F 67 SHEET 1 AC6 4 LYS F 6 SER F 11 0 SHEET 2 AC6 4 ASN F 21 PHE F 30 -1 O SER F 28 N LYS F 6 SHEET 3 AC6 4 PHE F 62 PHE F 70 -1 O PHE F 70 N ASN F 21 SHEET 4 AC6 4 SER F 55 PHE F 56 -1 N SER F 55 O TYR F 63 SHEET 1 AC7 4 GLU F 44 ARG F 45 0 SHEET 2 AC7 4 ILE F 35 LYS F 41 -1 N LYS F 41 O GLU F 44 SHEET 3 AC7 4 TYR F 78 HIS F 84 -1 O ARG F 81 N ASP F 38 SHEET 4 AC7 4 LYS F 91 LYS F 94 -1 O VAL F 93 N CYS F 80 SHEET 1 AC8 5 ASN G 3 ASP G 5 0 SHEET 2 AC8 5 VAL G 18 GLN G 25 -1 O THR G 23 N ASP G 5 SHEET 3 AC8 5 TYR G 70 LEU G 75 -1 O SER G 71 N CYS G 22 SHEET 4 AC8 5 PHE G 60 SER G 65 -1 N SER G 61 O LEU G 74 SHEET 5 AC8 5 GLY G 53 LYS G 57 -1 N LYS G 57 O PHE G 60 SHEET 1 AC9 5 GLU G 9 THR G 13 0 SHEET 2 AC9 5 THR G 103 LYS G 108 1 O ILE G 106 N MET G 10 SHEET 3 AC9 5 ALA G 84 LYS G 91 -1 N ALA G 84 O LEU G 105 SHEET 4 AC9 5 LEU G 32 GLN G 37 -1 N PHE G 33 O ALA G 89 SHEET 5 AC9 5 PRO G 43 ASN G 49 -1 O ASN G 49 N LEU G 32 SHEET 1 AD1 4 GLU G 9 THR G 13 0 SHEET 2 AD1 4 THR G 103 LYS G 108 1 O ILE G 106 N MET G 10 SHEET 3 AD1 4 ALA G 84 LYS G 91 -1 N ALA G 84 O LEU G 105 SHEET 4 AD1 4 LEU G 97 TRP G 99 -1 O ILE G 98 N VAL G 90 SHEET 1 AD2 4 ALA G 117 GLN G 120 0 SHEET 2 AD2 4 SER G 130 THR G 135 -1 O LEU G 133 N TYR G 119 SHEET 3 AD2 4 PHE G 166 SER G 175 -1 O ALA G 173 N CYS G 132 SHEET 4 AD2 4 TYR G 152 ILE G 153 -1 N TYR G 152 O TRP G 174 SHEET 1 AD3 4 ALA G 117 GLN G 120 0 SHEET 2 AD3 4 SER G 130 THR G 135 -1 O LEU G 133 N TYR G 119 SHEET 3 AD3 4 PHE G 166 SER G 175 -1 O ALA G 173 N CYS G 132 SHEET 4 AD3 4 CYS G 157 MET G 161 -1 N MET G 161 O PHE G 166 SHEET 1 AD4 4 VAL H 4 THR H 7 0 SHEET 2 AD4 4 MET H 19 GLN H 25 -1 O ALA H 24 N THR H 5 SHEET 3 AD4 4 PHE H 74 LEU H 78 -1 O LEU H 78 N MET H 19 SHEET 4 AD4 4 ASN H 65 ARG H 68 -1 N ASN H 65 O ARG H 77 SHEET 1 AD5 6 PHE H 10 LYS H 14 0 SHEET 2 AD5 6 SER H 110 LEU H 115 1 O LEU H 115 N LEU H 13 SHEET 3 AD5 6 SER H 87 SER H 94 -1 N TYR H 89 O SER H 110 SHEET 4 AD5 6 SER H 31 GLN H 37 -1 N TYR H 35 O PHE H 90 SHEET 5 AD5 6 ARG H 44 SER H 51 -1 O ILE H 46 N TRP H 34 SHEET 6 AD5 6 THR H 54 LYS H 57 -1 O ASP H 56 N TYR H 48 SHEET 1 AD6 4 PHE H 10 LYS H 14 0 SHEET 2 AD6 4 SER H 110 LEU H 115 1 O LEU H 115 N LEU H 13 SHEET 3 AD6 4 SER H 87 SER H 94 -1 N TYR H 89 O SER H 110 SHEET 4 AD6 4 PHE H 105 PHE H 106 -1 O PHE H 105 N SER H 93 SHEET 1 AD7 4 GLU H 125 PHE H 129 0 SHEET 2 AD7 4 LYS H 141 PHE H 151 -1 O VAL H 145 N PHE H 129 SHEET 3 AD7 4 TYR H 189 SER H 198 -1 O TYR H 189 N PHE H 151 SHEET 4 AD7 4 VAL H 171 THR H 173 -1 N CYS H 172 O ARG H 194 SHEET 1 AD8 4 GLU H 125 PHE H 129 0 SHEET 2 AD8 4 LYS H 141 PHE H 151 -1 O VAL H 145 N PHE H 129 SHEET 3 AD8 4 TYR H 189 SER H 198 -1 O TYR H 189 N PHE H 151 SHEET 4 AD8 4 LEU H 178 LYS H 179 -1 N LEU H 178 O ALA H 190 SHEET 1 AD9 4 LYS H 165 VAL H 167 0 SHEET 2 AD9 4 VAL H 156 VAL H 162 -1 N VAL H 162 O LYS H 165 SHEET 3 AD9 4 HIS H 208 PHE H 215 -1 O ARG H 210 N TRP H 161 SHEET 4 AD9 4 GLN H 234 TRP H 241 -1 O ALA H 240 N PHE H 209 SSBOND 1 CYS A 98 CYS A 161 1555 1555 2.08 SSBOND 2 CYS A 200 CYS A 256 1555 1555 2.01 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 98 CYS C 161 1555 1555 2.06 SSBOND 5 CYS C 200 CYS C 256 1555 1555 2.05 SSBOND 6 CYS D 22 CYS D 88 1555 1555 2.03 SSBOND 7 CYS D 132 CYS D 182 1555 1555 2.05 SSBOND 8 CYS D 157 CYS E 172 1555 1555 2.04 SSBOND 9 CYS E 23 CYS E 91 1555 1555 2.03 SSBOND 10 CYS E 146 CYS E 211 1555 1555 2.03 SSBOND 11 CYS F 25 CYS F 80 1555 1555 2.07 SSBOND 12 CYS G 22 CYS G 88 1555 1555 2.03 SSBOND 13 CYS G 132 CYS G 182 1555 1555 2.05 SSBOND 14 CYS G 157 CYS H 172 1555 1555 2.03 SSBOND 15 CYS H 23 CYS H 91 1555 1555 2.05 SSBOND 16 CYS H 146 CYS H 211 1555 1555 2.03 LINK NZ LYS A 43 C7 2LJ A 301 1555 1555 1.22 LINK NZ LYS C 43 C7 2LJ C 301 1555 1555 1.22 LINK OD1 ASN F 83 NA NA F 103 1555 1555 2.63 LINK O HIS F 84 NA NA F 103 1555 1555 2.47 LINK O LEU F 87 NA NA F 103 1555 1555 2.37 LINK NA NA F 103 O HOH F 277 1555 1555 2.81 LINK NA NA F 103 O HOH F 289 1555 1555 2.52 LINK NA NA F 103 O HOH F 292 1555 1555 2.34 LINK OH TYR H 47 NA NA H 302 1555 1555 2.58 LINK O PRO H 61 NA NA H 302 1555 1555 2.49 LINK O TYR H 64 NA NA H 302 1555 1555 2.39 LINK NA NA H 302 O HOH H 472 1555 1555 2.45 LINK NA NA H 302 O HOH H 485 1555 1555 2.48 LINK NA NA H 302 O HOH H 501 1555 1555 2.37 CISPEP 1 TYR A 206 PRO A 207 0 2.13 CISPEP 2 HIS B 31 PRO B 32 0 2.85 CISPEP 3 TYR C 206 PRO C 207 0 2.26 CISPEP 4 THR E 7 PRO E 8 0 -2.01 CISPEP 5 TYR E 152 PRO E 153 0 -2.81 CISPEP 6 HIS F 31 PRO F 32 0 2.20 CISPEP 7 THR H 7 PRO H 8 0 -3.13 CISPEP 8 TYR H 152 PRO H 153 0 -0.83 SITE 1 AC1 16 TYR A 7 ARG A 9 SER A 24 LYS A 43 SITE 2 AC1 16 HIS A 58 TYR A 62 LEU A 66 ARG A 94 SITE 3 AC1 16 ILE A 96 TYR A 152 TRP A 156 HOH A 443 SITE 4 AC1 16 HOH A 464 HOH A 504 TYR G 95 HOH H 420 SITE 1 AC2 7 GLN A 42 GLN A 64 ARG A 67 HOH A 484 SITE 2 AC2 7 THR H 54 THR H 55 ASP H 56 SITE 1 AC3 3 GLU A 180 ASP A 235 HOH A 470 SITE 1 AC4 16 TYR C 7 ARG C 9 SER C 24 LYS C 43 SITE 2 AC4 16 HIS C 58 TYR C 62 LEU C 66 ARG C 94 SITE 3 AC4 16 ILE C 96 TYR C 152 TRP C 156 HOH C 423 SITE 4 AC4 16 HOH C 428 HOH C 471 HOH C 481 TYR D 95 SITE 1 AC5 6 TRP C 241 HOH C 451 HOH C 468 HOH C 539 SITE 2 AC5 6 TYR F 10 GOL F 102 SITE 1 AC6 5 PRO F 5 LYS F 6 ILE F 7 LYS F 91 SITE 2 AC6 5 VAL F 93 SITE 1 AC7 8 GOL C 302 GLN F 8 VAL F 9 VAL F 93 SITE 2 AC7 8 LYS F 94 TRP F 95 ASP F 96 HOH F 230 SITE 1 AC8 6 ASN F 83 HIS F 84 LEU F 87 HOH F 277 SITE 2 AC8 6 HOH F 289 HOH F 292 SITE 1 AC9 5 ARG H 36 ARG H 44 HOH H 406 HOH H 408 SITE 2 AC9 5 HOH H 410 SITE 1 AD1 6 TYR H 47 PRO H 61 TYR H 64 HOH H 472 SITE 2 AD1 6 HOH H 485 HOH H 501 CRYST1 216.033 69.815 142.942 90.00 104.26 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004629 0.000000 0.001176 0.00000 SCALE2 0.000000 0.014324 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007218 0.00000