HEADER SIGNALING PROTEIN 28-JUL-19 6PY1 TITLE CRYSTAL STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF THE HUMAN TITLE 2 MACROPHAGE GALACTOSE C-TYPE LECTIN BOUND TO GALNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-TYPE LECTIN DOMAIN FAMILY 10 MEMBER A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: C-TYPE LECTIN SUPERFAMILY MEMBER 14,MACROPHAGE LECTIN 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLEC10A, CLECSF13, CLECSF14, HML; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRD, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.BIRRANE,P.V.MURPHY,A.GABBA,J.G.LUZ REVDAT 5 30-OCT-24 6PY1 1 REMARK REVDAT 4 11-OCT-23 6PY1 1 REMARK REVDAT 3 19-MAY-21 6PY1 1 JRNL REVDAT 2 31-MAR-21 6PY1 1 TITLE JRNL HETSYN REVDAT 1 29-JUL-20 6PY1 0 JRNL AUTH A.GABBA,A.BOGUCKA,J.G.LUZ,A.DINIZ,H.COELHO,F.CORZANA, JRNL AUTH 2 F.J.CANADA,F.MARCELO,P.V.MURPHY,G.BIRRANE JRNL TITL CRYSTAL STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF JRNL TITL 2 THE HUMAN MACROPHAGE GALACTOSE C-TYPE LECTIN BOUND TO GALNAC JRNL TITL 3 AND THE TUMOR-ASSOCIATED TN ANTIGEN. JRNL REF BIOCHEMISTRY V. 60 1327 2021 JRNL REFN ISSN 0006-2960 JRNL PMID 33724805 JRNL DOI 10.1021/ACS.BIOCHEM.1C00009 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM SELECTION REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.671 REMARK 3 FREE R VALUE TEST SET COUNT : 933 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1054 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09400 REMARK 3 B22 (A**2) : 0.09400 REMARK 3 B33 (A**2) : -0.30400 REMARK 3 B12 (A**2) : 0.04700 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.898 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1194 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 946 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1643 ; 1.639 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2222 ; 1.507 ; 1.601 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 150 ;12.857 ; 5.133 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;33.542 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 167 ;13.004 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 7.684 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 137 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1519 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 275 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 258 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 31 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 552 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 106 ; 0.238 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 7 ; 0.098 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 549 ; 1.918 ; 1.774 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 547 ; 1.804 ; 1.767 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 692 ; 2.877 ; 2.650 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 693 ; 2.875 ; 2.655 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 645 ; 2.801 ; 1.968 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 646 ; 2.805 ; 1.971 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 944 ; 4.096 ; 2.858 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 945 ; 4.094 ; 2.860 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6PY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000243249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 125 REMARK 200 PH : 6.0 - 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : BE CRL/SI ELLIPTICAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20014 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DV8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS PH 6.0 - 7.0, 200MM REMARK 280 MAGNESIUM CHLORIDE, 2.0 - 2.8M SODIUM CHLORIDE, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.61833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.23667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.23667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.61833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -185.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 407 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 543 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 589 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 640 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 178 REMARK 465 GLY A 309 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 502 O HOH A 578 2.01 REMARK 500 OD2 ASP A 281 O HOH A 502 2.05 REMARK 500 O HOH A 502 O HOH A 570 2.05 REMARK 500 O HOH A 502 O HOH A 636 2.10 REMARK 500 O HOH A 504 O HOH A 595 2.13 REMARK 500 O HOH A 503 O HOH A 510 2.15 REMARK 500 O HOH A 502 O HOH A 545 2.15 REMARK 500 O GLY A 277 O HOH A 503 2.16 REMARK 500 O HOH A 503 O HOH A 549 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 184 -3.42 82.59 REMARK 500 ASP A 243 39.20 -140.60 REMARK 500 GLU A 245 59.50 -106.51 REMARK 500 ASN A 262 48.98 -148.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 218 O REMARK 620 2 GLU A 224 OE1 84.9 REMARK 620 3 GLU A 224 OE2 77.0 51.3 REMARK 620 4 GLU A 305 OE1 78.1 86.5 132.2 REMARK 620 5 GLU A 305 OE2 126.4 77.7 123.3 50.9 REMARK 620 6 HOH A 569 O 107.2 155.9 150.7 76.1 78.4 REMARK 620 7 HOH A 594 O 150.4 90.0 77.1 130.8 80.4 88.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 243 OD1 REMARK 620 2 ASP A 243 OD2 49.7 REMARK 620 3 ASP A 270 OD1 163.9 145.2 REMARK 620 4 GLU A 280 O 89.7 124.4 82.5 REMARK 620 5 ASP A 281 OD1 78.2 119.7 86.2 74.9 REMARK 620 6 HOH A 555 O 100.7 77.9 90.8 74.6 149.4 REMARK 620 7 HOH A 577 O 83.0 74.5 95.5 145.5 70.6 139.9 REMARK 620 8 HOH A 590 O 118.5 70.7 74.7 143.5 130.2 77.6 66.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 267 OE1 REMARK 620 2 ASP A 269 OD1 73.2 REMARK 620 3 GLU A 280 OE2 143.8 71.0 REMARK 620 4 ASN A 292 OD1 69.7 143.0 145.8 REMARK 620 5 ASP A 293 O 134.3 132.3 71.2 77.4 REMARK 620 6 ASP A 293 OD1 75.0 78.5 92.7 92.2 75.4 REMARK 620 7 A2G A 401 O3 129.1 124.2 77.4 81.0 73.1 148.5 REMARK 620 8 A2G A 401 O4 79.6 75.9 96.5 97.0 136.4 148.1 63.4 REMARK 620 N 1 2 3 4 5 6 7 DBREF 6PY1 A 181 309 UNP Q8IUN9 CLC10_HUMAN 181 309 SEQADV 6PY1 GLY A 178 UNP Q8IUN9 EXPRESSION TAG SEQADV 6PY1 THR A 179 UNP Q8IUN9 EXPRESSION TAG SEQADV 6PY1 SER A 180 UNP Q8IUN9 EXPRESSION TAG SEQRES 1 A 132 GLY THR SER CYS PRO VAL ASN TRP VAL GLU HIS GLN ASP SEQRES 2 A 132 SER CYS TYR TRP PHE SER HIS SER GLY MET SER TRP ALA SEQRES 3 A 132 GLU ALA GLU LYS TYR CYS GLN LEU LYS ASN ALA HIS LEU SEQRES 4 A 132 VAL VAL ILE ASN SER ARG GLU GLU GLN ASN PHE VAL GLN SEQRES 5 A 132 LYS TYR LEU GLY SER ALA TYR THR TRP MET GLY LEU SER SEQRES 6 A 132 ASP PRO GLU GLY ALA TRP LYS TRP VAL ASP GLY THR ASP SEQRES 7 A 132 TYR ALA THR GLY PHE GLN ASN TRP LYS PRO GLY GLN PRO SEQRES 8 A 132 ASP ASP TRP GLN GLY HIS GLY LEU GLY GLY GLY GLU ASP SEQRES 9 A 132 CYS ALA HIS PHE HIS PRO ASP GLY ARG TRP ASN ASP ASP SEQRES 10 A 132 VAL CYS GLN ARG PRO TYR HIS TRP VAL CYS GLU ALA GLY SEQRES 11 A 132 LEU GLY HET A2G A 401 15 HET ACT A 402 4 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET CL A 407 1 HET CL A 408 1 HET CL A 409 1 HET CL A 410 1 HET CL A 411 1 HETNAM A2G 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETSYN A2G N-ACETYL-ALPHA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 A2G ALPHA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 A2G ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-2-DEOXY-2-AMINO- HETSYN 4 A2G GALACTOSE FORMUL 2 A2G C8 H15 N O6 FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 CA 4(CA 2+) FORMUL 8 CL 5(CL 1-) FORMUL 13 HOH *145(H2 O) HELIX 1 AA1 SER A 201 LYS A 212 1 12 HELIX 2 AA2 SER A 221 TYR A 231 1 11 SHEET 1 AA1 5 VAL A 186 HIS A 188 0 SHEET 2 AA1 5 SER A 191 PHE A 195 -1 O TYR A 193 N VAL A 186 SHEET 3 AA1 5 HIS A 301 GLY A 307 -1 O ALA A 306 N CYS A 192 SHEET 4 AA1 5 THR A 237 SER A 242 1 N TRP A 238 O HIS A 301 SHEET 5 AA1 5 LYS A 249 TRP A 250 -1 O LYS A 249 N SER A 242 SHEET 1 AA2 5 HIS A 215 LEU A 216 0 SHEET 2 AA2 5 HIS A 301 GLY A 307 -1 O GLU A 305 N HIS A 215 SHEET 3 AA2 5 THR A 237 SER A 242 1 N TRP A 238 O HIS A 301 SHEET 4 AA2 5 CYS A 282 PHE A 285 -1 O PHE A 285 N THR A 237 SHEET 5 AA2 5 TRP A 291 ASP A 294 -1 O ASP A 294 N CYS A 282 SSBOND 1 CYS A 181 CYS A 192 1555 1555 2.09 SSBOND 2 CYS A 209 CYS A 304 1555 1555 2.20 SSBOND 3 CYS A 282 CYS A 296 1555 1555 1.98 LINK O VAL A 218 CA CA A 403 1555 1555 2.29 LINK OE1 GLU A 224 CA CA A 403 1555 1555 2.44 LINK OE2 GLU A 224 CA CA A 403 1555 1555 2.67 LINK OD1 ASP A 243 CA CA A 404 1555 1555 2.59 LINK OD2 ASP A 243 CA CA A 404 1555 1555 2.65 LINK OE1 GLN A 267 CA CA A 405 1555 1555 2.43 LINK OD1 ASP A 269 CA CA A 405 1555 1555 2.51 LINK OD1 ASP A 270 CA CA A 404 1555 1555 2.45 LINK O GLU A 280 CA CA A 404 1555 1555 2.36 LINK OE2 GLU A 280 CA CA A 405 1555 1555 2.43 LINK OD1 ASP A 281 CA CA A 404 1555 1555 2.39 LINK OD1 ASN A 292 CA CA A 405 1555 1555 2.45 LINK O ASP A 293 CA CA A 405 1555 1555 2.49 LINK OD1 ASP A 293 CA CA A 405 1555 1555 2.37 LINK OE1 GLU A 305 CA CA A 403 1555 1555 2.68 LINK OE2 GLU A 305 CA CA A 403 1555 1555 2.50 LINK O3 A2G A 401 CA CA A 405 1555 1555 2.42 LINK O4 A2G A 401 CA CA A 405 1555 1555 2.41 LINK CA CA A 403 O HOH A 569 1555 1555 2.30 LINK CA CA A 403 O HOH A 594 1555 1555 2.45 LINK CA CA A 404 O HOH A 555 1555 1555 2.36 LINK CA CA A 404 O HOH A 577 1555 1555 2.61 LINK CA CA A 404 O HOH A 590 1555 1555 2.53 LINK CA CA A 406 O HOH A 501 1555 1555 2.82 CISPEP 1 GLN A 267 PRO A 268 0 -5.62 CRYST1 51.825 51.825 112.855 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019296 0.011140 0.000000 0.00000 SCALE2 0.000000 0.022281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008861 0.00000