HEADER HYDROLASE 31-JUL-19 6PZ7 TITLE GH5-4 BROAD SPECIFICITY ENDOGLUCANASE FROM CLOSTRIDIUM ACETOBUTYLICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE FAMILY 5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM ATCC 824; SOURCE 3 ORGANISM_TAXID: 272562; SOURCE 4 STRAIN: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787; SOURCE 5 GENE: CA_C0826; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS GH5-4, ENDOGLUCANASE, GLBRC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.BIANCHETTI,C.A.BINGMAN,B.G.FOX REVDAT 4 11-OCT-23 6PZ7 1 REMARK REVDAT 3 17-FEB-21 6PZ7 1 JRNL REVDAT 2 21-OCT-20 6PZ7 1 TITLE REMARK REVDAT 1 05-AUG-20 6PZ7 0 JRNL AUTH E.M.GLASGOW,E.I.KEMNA,C.A.BINGMAN,N.ING,K.DENG, JRNL AUTH 2 C.M.BIANCHETTI,T.E.TAKASUKA,T.R.NORTHEN,B.G.FOX JRNL TITL A STRUCTURAL AND KINETIC SURVEY OF GH5_4 ENDOGLUCANASES JRNL TITL 2 REVEALS DETERMINANTS OF BROAD SUBSTRATE SPECIFICITY AND JRNL TITL 3 OPPORTUNITIES FOR BIOMASS HYDROLYSIS. JRNL REF J.BIOL.CHEM. V. 295 17752 2020 JRNL REFN ESSN 1083-351X JRNL PMID 33454012 JRNL DOI 10.1074/JBC.RA120.015328 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 74833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.126 REMARK 3 FREE R VALUE : 0.148 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6400 - 3.2100 0.99 4655 160 0.1369 0.1694 REMARK 3 2 3.2100 - 2.5500 1.00 4525 154 0.1316 0.1523 REMARK 3 3 2.5500 - 2.2300 1.00 4440 155 0.1163 0.1329 REMARK 3 4 2.2300 - 2.0200 1.00 4439 149 0.1126 0.1370 REMARK 3 5 2.0200 - 1.8800 1.00 4417 148 0.1168 0.1417 REMARK 3 6 1.8800 - 1.7700 1.00 4414 149 0.1157 0.1236 REMARK 3 7 1.7700 - 1.6800 1.00 4359 148 0.1140 0.1281 REMARK 3 8 1.6800 - 1.6100 0.99 4376 147 0.1125 0.1430 REMARK 3 9 1.6100 - 1.5500 1.00 4364 150 0.1170 0.1473 REMARK 3 10 1.5500 - 1.4900 0.99 4339 142 0.1167 0.1259 REMARK 3 11 1.4900 - 1.4500 0.99 4343 144 0.1202 0.1613 REMARK 3 12 1.4500 - 1.4000 0.99 4323 147 0.1238 0.1497 REMARK 3 13 1.4000 - 1.3700 0.99 4318 149 0.1314 0.1401 REMARK 3 14 1.3700 - 1.3300 0.98 4262 143 0.1356 0.1434 REMARK 3 15 1.3300 - 1.3000 0.93 4057 139 0.1482 0.1681 REMARK 3 16 1.3000 - 1.2800 0.82 3586 121 0.1574 0.1887 REMARK 3 17 1.2800 - 1.2500 0.73 3167 104 0.1764 0.2046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.083 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.807 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2828 REMARK 3 ANGLE : 1.125 3877 REMARK 3 CHIRALITY : 0.088 425 REMARK 3 PLANARITY : 0.010 506 REMARK 3 DIHEDRAL : 12.655 1063 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3985 -2.0693 7.3610 REMARK 3 T TENSOR REMARK 3 T11: 0.0546 T22: 0.0697 REMARK 3 T33: 0.0371 T12: 0.0189 REMARK 3 T13: 0.0066 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.6810 L22: 0.6082 REMARK 3 L33: 0.6722 L12: 0.1451 REMARK 3 L13: 0.1083 L23: 0.0481 REMARK 3 S TENSOR REMARK 3 S11: 0.0220 S12: 0.1400 S13: 0.0020 REMARK 3 S21: -0.1524 S22: -0.0878 S23: -0.0452 REMARK 3 S31: -0.0590 S32: -0.0182 S33: -0.1569 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3745 9.3351 10.9234 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0612 REMARK 3 T33: 0.0683 T12: -0.0005 REMARK 3 T13: -0.0055 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.2463 L22: 0.2783 REMARK 3 L33: 0.5378 L12: 0.1355 REMARK 3 L13: -0.0213 L23: -0.1748 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: 0.0606 S13: 0.0908 REMARK 3 S21: 0.0185 S22: -0.0398 S23: -0.0853 REMARK 3 S31: -0.0633 S32: 0.0520 S33: 0.0393 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3658 6.8827 8.1397 REMARK 3 T TENSOR REMARK 3 T11: 0.0669 T22: 0.0579 REMARK 3 T33: 0.0601 T12: 0.0067 REMARK 3 T13: -0.0010 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.4925 L22: 0.4430 REMARK 3 L33: 0.3647 L12: 0.0801 REMARK 3 L13: -0.0153 L23: -0.1344 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: 0.0755 S13: 0.0861 REMARK 3 S21: -0.0171 S22: 0.0271 S23: 0.0025 REMARK 3 S31: -0.0398 S32: -0.0137 S33: -0.3877 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7370 -1.7914 7.2938 REMARK 3 T TENSOR REMARK 3 T11: 0.0602 T22: 0.0734 REMARK 3 T33: 0.0553 T12: -0.0031 REMARK 3 T13: -0.0010 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.5793 L22: 0.4168 REMARK 3 L33: 0.4310 L12: 0.1171 REMARK 3 L13: -0.1182 L23: -0.1350 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: 0.0956 S13: 0.0181 REMARK 3 S21: -0.0258 S22: 0.0541 S23: 0.0343 REMARK 3 S31: 0.0203 S32: -0.0558 S33: -0.0206 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4197 -13.3983 19.2792 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.0552 REMARK 3 T33: 0.0858 T12: 0.0017 REMARK 3 T13: -0.0002 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.5777 L22: 0.5164 REMARK 3 L33: 0.3418 L12: -0.0775 REMARK 3 L13: 0.0099 L23: -0.4883 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: -0.0147 S13: -0.1481 REMARK 3 S21: 0.0063 S22: -0.0187 S23: -0.0228 REMARK 3 S31: 0.0805 S32: 0.0198 S33: -0.0277 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1901 -14.7034 18.1511 REMARK 3 T TENSOR REMARK 3 T11: 0.0918 T22: 0.0756 REMARK 3 T33: 0.1246 T12: 0.0145 REMARK 3 T13: -0.0094 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.0955 L22: 0.1098 REMARK 3 L33: 0.2665 L12: 0.0158 REMARK 3 L13: 0.0419 L23: -0.0070 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0061 S13: -0.1643 REMARK 3 S21: 0.0548 S22: -0.0177 S23: -0.1895 REMARK 3 S31: 0.1044 S32: 0.1219 S33: -0.1648 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 296 THROUGH 335 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9673 -1.1442 20.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.0791 T22: 0.0859 REMARK 3 T33: 0.0997 T12: -0.0044 REMARK 3 T13: -0.0132 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.4281 L22: 0.4779 REMARK 3 L33: 0.3495 L12: -0.1342 REMARK 3 L13: 0.2996 L23: -0.2810 REMARK 3 S TENSOR REMARK 3 S11: -0.0174 S12: 0.0108 S13: 0.0169 REMARK 3 S21: 0.1065 S22: -0.0360 S23: -0.1681 REMARK 3 S31: -0.0183 S32: 0.1040 S33: -0.0315 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PZ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978560 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190315 REMARK 200 DATA SCALING SOFTWARE : XSCALE 20190315 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78485 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 28.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06490 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20930 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3NDZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED IN SD2 PLATES REMARK 280 SET BY A MOSQUITO CRYSTALLIZATION ROBOT. THE HIT CAME FROM PACT REMARK 280 PREMIERE SCREEN A7, 200 MM NACL, 100 MM SODIUM ACETATE PH 5.0, REMARK 280 25% PEG 6K. CRYSTALS WERE CRYOPRESERVED IN RESERVOIR SOLUTION REMARK 280 SUPPLEMENTED WITH 15% ETHYLENE GLYCOL., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.86050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.49750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.98250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.49750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.86050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.98250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 ASN A 3 REMARK 465 PRO A 4 REMARK 465 HIS A 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 57 HE22 GLN A 142 1.31 REMARK 500 O HOH A 507 O HOH A 582 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 730 O HOH A 746 3445 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 17 -71.14 72.77 REMARK 500 LYS A 17 -70.46 72.08 REMARK 500 THR A 25 -99.34 -128.55 REMARK 500 HIS A 101 -109.04 -126.68 REMARK 500 ASN A 145 -82.03 -91.16 REMARK 500 SER A 183 -137.95 49.49 REMARK 500 ALA A 196 15.54 58.46 REMARK 500 ASN A 211 14.97 58.91 REMARK 500 ASN A 277 43.84 -146.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 99 THR A 100 149.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6MQ4 RELATED DB: PDB REMARK 900 RELATED ID: 6Q1I RELATED DB: PDB REMARK 900 RELATED ID: 6UI3 RELATED DB: PDB REMARK 900 RELATED ID: 6WQP RELATED DB: PDB REMARK 900 RELATED ID: 6WQY RELATED DB: PDB REMARK 900 RELATED ID: 6XRK RELATED DB: PDB REMARK 900 RELATED ID: 6XSO RELATED DB: PDB REMARK 900 RELATED ID: 6XSU RELATED DB: PDB REMARK 900 RELATED ID: 4IM4 RELATED DB: PDB DBREF 6PZ7 A 2 335 UNP Q97KU0 Q97KU0_CLOAB 34 367 SEQADV 6PZ7 SER A 1 UNP Q97KU0 EXPRESSION TAG SEQADV 6PZ7 GLN A 142 UNP Q97KU0 GLU 174 CONFLICT SEQADV 6PZ7 GLN A 269 UNP Q97KU0 GLU 301 CONFLICT SEQRES 1 A 335 SER VAL ASN PRO HIS ASP MET THR SER GLN GLN ILE VAL SEQRES 2 A 335 ASN ASP MET LYS VAL GLY TRP ASN LEU GLY ASN THR LEU SEQRES 3 A 335 ASP ALA SER PRO ASP GLU THR GLY TRP GLY ASN PRO LYS SEQRES 4 A 335 THR THR LYS ALA MET ILE ASP LYS ILE LYS GLU ALA GLY SEQRES 5 A 335 PHE ASN THR VAL ARG ILE PRO VAL SER TRP SER SER HIS SEQRES 6 A 335 ILE GLY ALA GLY PRO SER TYR THR ILE ASP GLN ALA TRP SEQRES 7 A 335 LEU ASN ARG VAL GLN GLU VAL VAL ASN TYR VAL ILE GLN SEQRES 8 A 335 ASP HIS MET TYR ALA ILE LEU ASN THR HIS HIS ASP THR SEQRES 9 A 335 SER TRP ILE ILE PRO THR TYR ASN LYS GLU ALA ALA SER SEQRES 10 A 335 THR ASP GLU LEU THR LYS VAL TRP GLY GLN ILE ALA ASN SEQRES 11 A 335 ARG PHE LYS ASP TYR ASP SER HIS LEU ILE PHE GLN THR SEQRES 12 A 335 LEU ASN GLU PRO ARG ILE VAL GLY SER PRO GLU GLU TRP SEQRES 13 A 335 ASN GLY GLY THR ALA GLU SER ARG ASP VAL ILE ASN LYS SEQRES 14 A 335 PHE ASN LEU THR ALA VAL ASN THR ILE ARG SER THR GLY SEQRES 15 A 335 SER ASN ASN SER SER ARG PHE ILE MET VAL PRO THR TYR SEQRES 16 A 335 ALA ALA SER THR ALA THR ALA ALA MET ASN ASP LEU VAL SEQRES 17 A 335 ILE PRO ASN ASN ASP LYS ARG VAL ILE VAL SER LEU HIS SEQRES 18 A 335 MET TYR ALA PRO TYR SER PHE ALA MET ASP PRO LYS GLY SEQRES 19 A 335 THR SER HIS TRP GLY GLY GLU ALA ASP LYS ASP ALA LEU SEQRES 20 A 335 ASP GLY GLN LEU ASN ALA ILE TYR ASN LYS PHE VAL LYS SEQRES 21 A 335 ASN GLY GLN PRO VAL VAL ILE GLY GLN PHE GLY SER ILE SEQRES 22 A 335 ASN LYS ASN ASN GLU SER SER ARG ALA SER LEU ALA LYS SEQRES 23 A 335 PHE TYR VAL SER ASP ALA ARG LYS LYS GLY ILE THR THR SEQRES 24 A 335 VAL TRP TRP ASP ASN GLY LYS SER ALA VAL GLY ASP ASP SEQRES 25 A 335 ASN TYR GLY ILE LEU ASP ARG ASN ASN LEU THR TRP VAL SEQRES 26 A 335 PHE PRO LYS LEU VAL ARG THR ILE VAL ASN HET EDO A 401 10 HET EDO A 402 10 HET EDO A 403 10 HET CL A 404 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 CL CL 1- FORMUL 6 HOH *378(H2 O) HELIX 1 AA1 THR A 8 LYS A 17 1 10 HELIX 2 AA2 THR A 41 GLY A 52 1 12 HELIX 3 AA3 TRP A 62 ILE A 66 5 5 HELIX 4 AA4 ASP A 75 ASP A 92 1 18 HELIX 5 AA5 THR A 110 LYS A 133 1 24 HELIX 6 AA6 THR A 160 THR A 181 1 22 HELIX 7 AA7 GLY A 182 SER A 187 5 6 HELIX 8 AA8 TYR A 195 SER A 198 5 4 HELIX 9 AA9 ALA A 200 LEU A 207 1 8 HELIX 10 AB1 ILE A 209 ASP A 213 5 5 HELIX 11 AB2 PRO A 225 MET A 230 1 6 HELIX 12 AB3 GLY A 240 PHE A 258 1 19 HELIX 13 AB4 VAL A 259 GLY A 262 5 4 HELIX 14 AB5 ASN A 277 LYS A 295 1 19 HELIX 15 AB6 PHE A 326 ASN A 335 1 10 SHEET 1 AA1 9 GLY A 19 LEU A 22 0 SHEET 2 AA1 9 THR A 55 ILE A 58 1 O ARG A 57 N LEU A 22 SHEET 3 AA1 9 TYR A 95 ASN A 99 1 O ILE A 97 N ILE A 58 SHEET 4 AA1 9 LEU A 139 GLN A 142 1 O ILE A 140 N ALA A 96 SHEET 5 AA1 9 ILE A 190 PRO A 193 1 O MET A 191 N PHE A 141 SHEET 6 AA1 9 VAL A 216 HIS A 221 1 O ILE A 217 N ILE A 190 SHEET 7 AA1 9 VAL A 265 PHE A 270 1 O VAL A 266 N VAL A 218 SHEET 8 AA1 9 THR A 298 ASP A 303 1 O TRP A 302 N PHE A 270 SHEET 9 AA1 9 GLY A 19 LEU A 22 1 N ASN A 21 O TRP A 301 SHEET 1 AA2 2 LEU A 317 ASP A 318 0 SHEET 2 AA2 2 THR A 323 TRP A 324 -1 O THR A 323 N ASP A 318 CISPEP 1 SER A 29 PRO A 30 0 -1.75 CISPEP 2 GLY A 69 PRO A 70 0 6.91 CISPEP 3 ALA A 224 PRO A 225 0 -14.55 SITE 1 AC1 8 ALA A 68 GLY A 69 SER A 71 ASP A 134 SITE 2 AC1 8 TYR A 135 ASP A 136 HOH A 610 HOH A 618 SITE 1 AC2 5 GLU A 146 TYR A 223 EDO A 403 HOH A 504 SITE 2 AC2 5 HOH A 655 SITE 1 AC3 6 ALA A 196 SER A 198 HIS A 221 EDO A 402 SITE 2 AC3 6 HOH A 526 HOH A 537 SITE 1 AC4 6 THR A 110 ASN A 112 GLU A 241 ALA A 242 SITE 2 AC4 6 HOH A 568 HOH A 845 CRYST1 51.721 51.965 102.995 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019335 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009709 0.00000