HEADER IMMUNE SYSTEM 03-AUG-19 6Q19 TITLE INFERRED INTERMEDIATE (I-6) OF THE HUMAN ANTIBODY LINEAGE 652 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB LAMBDA CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: 293T; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: 293T KEYWDS ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.R.MCCARTHY,S.C.HARRISON REVDAT 2 01-JAN-20 6Q19 1 JRNL REVDAT 1 18-DEC-19 6Q19 0 JRNL AUTH K.R.MCCARTHY,D.D.RAYMOND,K.T.DO,A.G.SCHMIDT,S.C.HARRISON JRNL TITL AFFINITY MATURATION IN A HUMAN HUMORAL RESPONSE TO INFLUENZA JRNL TITL 2 HEMAGGLUTININ. JRNL REF PROC.NATL.ACAD.SCI.USA 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31843892 JRNL DOI 10.1073/PNAS.1915620116 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 55506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5000 - 4.2878 1.00 2773 115 0.1551 0.1768 REMARK 3 2 4.2878 - 3.4037 0.99 2672 143 0.1331 0.1481 REMARK 3 3 3.4037 - 2.9735 1.00 2667 157 0.1479 0.1736 REMARK 3 4 2.9735 - 2.7017 1.00 2710 120 0.1540 0.2033 REMARK 3 5 2.7017 - 2.5080 1.00 2662 137 0.1734 0.2035 REMARK 3 6 2.5080 - 2.3602 1.00 2698 132 0.1613 0.1970 REMARK 3 7 2.3602 - 2.2420 1.00 2679 141 0.1617 0.1997 REMARK 3 8 2.2420 - 2.1444 1.00 2647 163 0.1472 0.1973 REMARK 3 9 2.1444 - 2.0618 1.00 2634 149 0.1549 0.1679 REMARK 3 10 2.0618 - 1.9907 1.00 2652 136 0.1600 0.1999 REMARK 3 11 1.9907 - 1.9284 1.00 2687 129 0.1629 0.1716 REMARK 3 12 1.9284 - 1.8733 1.00 2677 146 0.1722 0.2043 REMARK 3 13 1.8733 - 1.8240 1.00 2652 140 0.1761 0.1927 REMARK 3 14 1.8240 - 1.7795 1.00 2672 122 0.1919 0.2505 REMARK 3 15 1.7795 - 1.7390 1.00 2666 128 0.2025 0.2177 REMARK 3 16 1.7390 - 1.7020 1.00 2667 147 0.2215 0.2264 REMARK 3 17 1.7020 - 1.6680 1.00 2654 148 0.2335 0.2544 REMARK 3 18 1.6680 - 1.6365 0.96 2575 128 0.2538 0.2787 REMARK 3 19 1.6365 - 1.6073 0.92 2424 149 0.2611 0.2681 REMARK 3 20 1.6073 - 1.5800 0.86 2288 120 0.2748 0.2845 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.3072 -1.0321 -22.4535 REMARK 3 T TENSOR REMARK 3 T11: 0.1876 T22: 0.1686 REMARK 3 T33: 0.2193 T12: -0.0288 REMARK 3 T13: 0.0239 T23: -0.0171 REMARK 3 L TENSOR REMARK 3 L11: 3.3828 L22: 2.8778 REMARK 3 L33: 3.0113 L12: -0.8280 REMARK 3 L13: -0.9526 L23: 0.5438 REMARK 3 S TENSOR REMARK 3 S11: 0.1315 S12: -0.2390 S13: 0.3866 REMARK 3 S21: 0.1444 S22: -0.0108 S23: -0.3372 REMARK 3 S31: -0.1813 S32: 0.2678 S33: -0.0878 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 25 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.6327 -8.0560 -27.7583 REMARK 3 T TENSOR REMARK 3 T11: 0.0862 T22: 0.0944 REMARK 3 T33: 0.0837 T12: 0.0135 REMARK 3 T13: -0.0009 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.8161 L22: 1.8240 REMARK 3 L33: 2.0494 L12: 0.0911 REMARK 3 L13: -0.6444 L23: 0.2265 REMARK 3 S TENSOR REMARK 3 S11: 0.0299 S12: 0.0566 S13: 0.0347 REMARK 3 S21: -0.0540 S22: 0.0053 S23: -0.0615 REMARK 3 S31: -0.1012 S32: -0.0350 S33: -0.0238 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 111 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.3487 -9.0183 2.7004 REMARK 3 T TENSOR REMARK 3 T11: 0.1330 T22: 0.1375 REMARK 3 T33: 0.1289 T12: -0.0124 REMARK 3 T13: -0.0286 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.0752 L22: 1.6980 REMARK 3 L33: 2.1477 L12: 0.3075 REMARK 3 L13: -1.4870 L23: -0.8632 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0813 S13: -0.0769 REMARK 3 S21: 0.0315 S22: -0.0416 S23: -0.1260 REMARK 3 S31: -0.0448 S32: -0.0454 S33: 0.0591 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 134 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1025 -5.6361 6.0572 REMARK 3 T TENSOR REMARK 3 T11: 0.1048 T22: 0.1125 REMARK 3 T33: 0.1107 T12: -0.0072 REMARK 3 T13: -0.0092 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.5911 L22: 1.9554 REMARK 3 L33: 2.2619 L12: -0.0347 REMARK 3 L13: -1.2430 L23: -0.2606 REMARK 3 S TENSOR REMARK 3 S11: -0.0192 S12: -0.0054 S13: 0.0683 REMARK 3 S21: -0.0908 S22: 0.0253 S23: -0.1490 REMARK 3 S31: 0.0358 S32: 0.0664 S33: 0.0138 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 202 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9217 0.9457 7.4663 REMARK 3 T TENSOR REMARK 3 T11: 0.1572 T22: 0.1211 REMARK 3 T33: 0.1741 T12: 0.0039 REMARK 3 T13: 0.0015 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 8.0241 L22: 3.4509 REMARK 3 L33: 4.5556 L12: 4.7723 REMARK 3 L13: -3.9120 L23: -3.0794 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: -0.0523 S13: 0.6072 REMARK 3 S21: -0.2707 S22: 0.0954 S23: 0.2258 REMARK 3 S31: 0.0832 S32: -0.0473 S33: -0.0680 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.0266 -29.4175 -16.8351 REMARK 3 T TENSOR REMARK 3 T11: 0.1452 T22: 0.1662 REMARK 3 T33: 0.2169 T12: -0.0152 REMARK 3 T13: 0.0234 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.9188 L22: 2.3721 REMARK 3 L33: 3.9773 L12: -0.1281 REMARK 3 L13: -0.0073 L23: -1.3495 REMARK 3 S TENSOR REMARK 3 S11: -0.1010 S12: -0.1279 S13: -0.1583 REMARK 3 S21: -0.0294 S22: 0.1967 S23: 0.2515 REMARK 3 S31: 0.1432 S32: -0.5730 S33: -0.1276 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1531 -27.4454 -25.4839 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.1194 REMARK 3 T33: 0.1385 T12: 0.0022 REMARK 3 T13: 0.0040 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.1293 L22: 1.3356 REMARK 3 L33: 1.2073 L12: -0.2799 REMARK 3 L13: -0.2763 L23: -0.4568 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: 0.1051 S13: -0.1736 REMARK 3 S21: -0.1472 S22: -0.0188 S23: 0.0292 REMARK 3 S31: 0.1287 S32: 0.0246 S33: 0.0557 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 65 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.1807 -34.8078 -24.3174 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.1536 REMARK 3 T33: 0.2259 T12: -0.0031 REMARK 3 T13: 0.0401 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 4.3757 L22: 1.6465 REMARK 3 L33: 2.9923 L12: 0.0254 REMARK 3 L13: 1.9342 L23: 0.1440 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.1320 S13: -0.4760 REMARK 3 S21: -0.2210 S22: 0.0155 S23: 0.0187 REMARK 3 S31: 0.2053 S32: -0.0885 S33: -0.0088 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 84 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.7560 -21.8207 -29.5316 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: 0.1325 REMARK 3 T33: 0.1262 T12: 0.0047 REMARK 3 T13: -0.0132 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.8518 L22: 1.1497 REMARK 3 L33: 1.5229 L12: -0.5439 REMARK 3 L13: -0.2075 L23: -0.4315 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.1038 S13: -0.1106 REMARK 3 S21: -0.1756 S22: -0.0740 S23: -0.0159 REMARK 3 S31: 0.0801 S32: 0.0788 S33: 0.0747 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 121 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.5817 -27.0898 -6.8128 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.1255 REMARK 3 T33: 0.1593 T12: 0.0235 REMARK 3 T13: 0.0108 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.8838 L22: 0.5555 REMARK 3 L33: 2.6539 L12: 0.3763 REMARK 3 L13: -1.5985 L23: 0.4742 REMARK 3 S TENSOR REMARK 3 S11: -0.2206 S12: -0.1553 S13: -0.2530 REMARK 3 S21: 0.0501 S22: -0.0612 S23: -0.1448 REMARK 3 S31: 0.1240 S32: 0.0651 S33: 0.1052 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 137 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8313 -9.7741 0.4454 REMARK 3 T TENSOR REMARK 3 T11: 0.2631 T22: 0.1743 REMARK 3 T33: 0.2037 T12: 0.0822 REMARK 3 T13: -0.0235 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.6478 L22: 1.0713 REMARK 3 L33: 1.4195 L12: 0.8707 REMARK 3 L13: 0.0118 L23: -0.9266 REMARK 3 S TENSOR REMARK 3 S11: -0.1816 S12: -0.2481 S13: 0.3291 REMARK 3 S21: 0.3594 S22: 0.2339 S23: 0.3766 REMARK 3 S31: -0.5378 S32: -0.2487 S33: -0.0631 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 152 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.0672 -18.3091 -5.5040 REMARK 3 T TENSOR REMARK 3 T11: 0.1190 T22: 0.1334 REMARK 3 T33: 0.1213 T12: 0.0071 REMARK 3 T13: -0.0248 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.4652 L22: 1.6602 REMARK 3 L33: 0.7167 L12: -1.4297 REMARK 3 L13: -0.1578 L23: 0.0617 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.1075 S13: 0.1603 REMARK 3 S21: -0.0779 S22: -0.0505 S23: 0.0233 REMARK 3 S31: -0.0545 S32: -0.0391 S33: 0.0050 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 175 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.2111 -14.4272 -4.5061 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.1577 REMARK 3 T33: 0.1523 T12: -0.0053 REMARK 3 T13: -0.0029 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.4687 L22: 3.3182 REMARK 3 L33: 0.2492 L12: -0.8864 REMARK 3 L13: -0.6035 L23: 0.4632 REMARK 3 S TENSOR REMARK 3 S11: -0.1876 S12: -0.0390 S13: 0.2604 REMARK 3 S21: 0.0991 S22: 0.1205 S23: -0.2603 REMARK 3 S31: -0.2720 S32: -0.0282 S33: 0.0710 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 193 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3795 -16.0163 -7.5161 REMARK 3 T TENSOR REMARK 3 T11: 0.1192 T22: 0.1621 REMARK 3 T33: 0.1065 T12: 0.0096 REMARK 3 T13: -0.0264 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 2.9977 L22: 2.4108 REMARK 3 L33: 0.8318 L12: -1.9508 REMARK 3 L13: 0.5970 L23: -0.4410 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.0854 S13: -0.1086 REMARK 3 S21: -0.1538 S22: -0.0450 S23: 0.1876 REMARK 3 S31: -0.0198 S32: -0.0907 S33: 0.0124 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 221 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4827 -21.5476 -3.7502 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.1364 REMARK 3 T33: 0.1818 T12: -0.0314 REMARK 3 T13: 0.0259 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 3.0027 L22: 3.8944 REMARK 3 L33: 2.3503 L12: -0.2243 REMARK 3 L13: 2.3424 L23: -1.6046 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: -0.1740 S13: -0.0841 REMARK 3 S21: 0.2568 S22: -0.0919 S23: 0.5709 REMARK 3 S31: 0.0383 S32: -0.2994 S33: 0.1097 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Q19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 46.573 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06087 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.67140 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M SODIUM CHLORIDE, 30% (W/V) PEG REMARK 280 8000, 100 MM HEPES PH7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.01500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA L -1 REMARK 465 SER L 0 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 SER L 216 REMARK 465 ASP H 234 REMARK 465 LYS H 235 REMARK 465 HIS H 236 REMARK 465 HIS H 237 REMARK 465 HIS H 238 REMARK 465 HIS H 239 REMARK 465 HIS H 240 REMARK 465 HIS H 241 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 231 CG CD CE NZ REMARK 470 SER H 232 OG REMARK 470 CYS H 233 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN H 216 O HOH H 301 1.93 REMARK 500 O HOH H 301 O HOH H 545 1.95 REMARK 500 NH2 ARG L 54 O HOH L 301 1.98 REMARK 500 O HOH L 498 O HOH L 502 1.98 REMARK 500 O HOH H 542 O HOH H 568 1.99 REMARK 500 O HOH L 488 O HOH L 489 1.99 REMARK 500 O HOH H 471 O HOH H 512 2.01 REMARK 500 NZ LYS H 65 O HOH H 302 2.03 REMARK 500 O HOH H 515 O HOH H 580 2.04 REMARK 500 O HOH H 540 O HOH H 588 2.06 REMARK 500 O HOH L 440 O HOH L 513 2.08 REMARK 500 OD1 ASN L 132 O HOH L 302 2.11 REMARK 500 O HOH L 393 O HOH L 455 2.12 REMARK 500 O HOH L 498 O HOH H 563 2.13 REMARK 500 O HOH L 311 O HOH L 524 2.14 REMARK 500 O HOH H 548 O HOH H 577 2.17 REMARK 500 O HOH H 449 O HOH H 534 2.17 REMARK 500 NZ LYS L 133 O HOH L 303 2.18 REMARK 500 OE1 GLU L 202 O HOH L 304 2.18 REMARK 500 O HOH L 474 O HOH L 520 2.19 REMARK 500 O HOH H 427 O HOH H 579 2.19 REMARK 500 O HOH L 340 O HOH L 542 2.19 REMARK 500 O HOH H 457 O HOH H 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH L 382 O HOH H 557 2755 1.85 REMARK 500 O HOH L 534 O HOH H 521 2755 1.96 REMARK 500 O HOH H 507 O HOH H 527 1655 2.09 REMARK 500 O HOH L 524 O HOH H 471 2755 2.14 REMARK 500 O HOH L 373 O HOH H 539 2755 2.14 REMARK 500 O HOH L 513 O HOH H 539 2755 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS L 51 -50.22 76.47 REMARK 500 ASN L 52 21.73 -146.77 REMARK 500 HIS L 97 62.43 65.49 REMARK 500 ASN L 132 30.96 72.52 REMARK 500 ASP L 155 -117.76 52.54 REMARK 500 ASN L 174 -1.19 72.74 REMARK 500 SER H 15 -0.78 67.53 REMARK 500 ASP H 161 60.77 64.31 REMARK 500 LYS H 231 -71.10 -59.13 REMARK 500 SER H 232 -138.32 59.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 594 DISTANCE = 6.03 ANGSTROMS DBREF 6Q19 L -1 216 PDB 6Q19 6Q19 -1 216 DBREF 6Q19 H 1 241 PDB 6Q19 6Q19 1 241 SEQRES 1 L 217 ALA SER SER SER GLU LEU THR GLN ASP PRO ALA VAL SER SEQRES 2 L 217 VAL ALA LEU GLY GLN THR VAL ARG ILE THR CYS GLN GLY SEQRES 3 L 217 ASP SER LEU ARG GLY TYR TYR ALA SER TRP TYR GLN GLN SEQRES 4 L 217 LYS PRO GLY GLN ALA PRO VAL LEU VAL ILE TYR GLY LYS SEQRES 5 L 217 ASN ASN ARG PRO SER GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 217 SER SER SER GLY ASN THR ALA SER LEU THR ILE THR GLY SEQRES 7 L 217 ALA GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS ASN SER SEQRES 8 L 217 ARG ASP SER SER GLY ASN HIS PRO VAL VAL PHE GLY GLY SEQRES 9 L 217 GLY THR LYS LEU THR VAL LEU GLY GLN PRO LYS GLY ALA SEQRES 10 L 217 PRO SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 L 217 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 L 217 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 L 217 SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SEQRES 14 L 217 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 L 217 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 L 217 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 L 217 LYS THR VAL ALA PRO THR GLU CYS SER SEQRES 1 H 241 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 241 PRO SER GLY THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 H 241 GLY SER ILE SER SER SER ASN TRP TRP SER TRP VAL ARG SEQRES 4 H 241 GLN PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY GLU ILE SEQRES 5 H 241 SER HIS GLY GLY TYR THR ASN TYR ASN PRO SER LEU LYS SEQRES 6 H 241 SER ARG VAL THR ILE SER VAL ASP LYS SER LYS ASN GLN SEQRES 7 H 241 PHE SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR SEQRES 8 H 241 ALA VAL TYR TYR CYS ALA ARG ALA PRO PRO TYR CYS THR SEQRES 9 H 241 SER ALA SER CYS PRO ASP ASP TYR TYR TYR TYR TYR MET SEQRES 10 H 241 ASP VAL TRP GLY LYS GLY THR THR VAL THR VAL SER GLY SEQRES 11 H 241 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 12 H 241 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 13 H 241 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 14 H 241 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 15 H 241 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 16 H 241 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 17 H 241 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 18 H 241 THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP SEQRES 19 H 241 LYS HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *541(H2 O) HELIX 1 AA1 ASP L 26 ARG L 29 5 4 HELIX 2 AA2 GLN L 79 GLU L 83 5 5 HELIX 3 AA3 SER L 125 ALA L 131 1 7 HELIX 4 AA4 THR L 185 HIS L 192 1 8 HELIX 5 AA5 THR H 87 THR H 91 5 5 HELIX 6 AA6 SER H 144 LYS H 146 5 3 HELIX 7 AA7 SER H 173 ALA H 175 5 3 HELIX 8 AA8 SER H 204 LEU H 206 5 3 HELIX 9 AA9 LYS H 218 ASN H 221 5 4 SHEET 1 AA1 5 ALA L 9 ALA L 14 0 SHEET 2 AA1 5 THR L 105 LEU L 110 1 O LEU L 110 N VAL L 13 SHEET 3 AA1 5 ALA L 84 ARG L 91 -1 N ALA L 84 O LEU L 107 SHEET 4 AA1 5 SER L 34 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AA1 5 VAL L 45 ILE L 48 -1 O VAL L 45 N GLN L 37 SHEET 1 AA2 4 ALA L 9 ALA L 14 0 SHEET 2 AA2 4 THR L 105 LEU L 110 1 O LEU L 110 N VAL L 13 SHEET 3 AA2 4 ALA L 84 ARG L 91 -1 N ALA L 84 O LEU L 107 SHEET 4 AA2 4 VAL L 99 PHE L 101 -1 O VAL L 100 N SER L 90 SHEET 1 AA3 3 VAL L 19 GLN L 24 0 SHEET 2 AA3 3 THR L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 3 AA3 3 PHE L 62 SER L 67 -1 N SER L 65 O SER L 72 SHEET 1 AA4 4 SER L 118 PHE L 122 0 SHEET 2 AA4 4 ALA L 134 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 AA4 4 TYR L 176 LEU L 184 -1 O SER L 180 N CYS L 138 SHEET 4 AA4 4 VAL L 163 THR L 165 -1 N GLU L 164 O TYR L 181 SHEET 1 AA5 4 SER L 118 PHE L 122 0 SHEET 2 AA5 4 ALA L 134 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 AA5 4 TYR L 176 LEU L 184 -1 O SER L 180 N CYS L 138 SHEET 4 AA5 4 SER L 169 LYS L 170 -1 N SER L 169 O ALA L 177 SHEET 1 AA6 4 SER L 157 VAL L 159 0 SHEET 2 AA6 4 THR L 149 ALA L 154 -1 N ALA L 154 O SER L 157 SHEET 3 AA6 4 TYR L 195 HIS L 201 -1 O GLN L 198 N ALA L 151 SHEET 4 AA6 4 SER L 204 VAL L 210 -1 O SER L 204 N HIS L 201 SHEET 1 AA7 4 GLN H 3 SER H 7 0 SHEET 2 AA7 4 LEU H 18 SER H 25 -1 O ALA H 23 N GLN H 5 SHEET 3 AA7 4 GLN H 78 LEU H 83 -1 O PHE H 79 N CYS H 22 SHEET 4 AA7 4 VAL H 68 ASP H 73 -1 N ASP H 73 O GLN H 78 SHEET 1 AA8 6 LEU H 11 VAL H 12 0 SHEET 2 AA8 6 THR H 124 VAL H 128 1 O THR H 127 N VAL H 12 SHEET 3 AA8 6 ALA H 92 ALA H 99 -1 N TYR H 94 O THR H 124 SHEET 4 AA8 6 TRP H 34 GLN H 40 -1 N VAL H 38 O TYR H 95 SHEET 5 AA8 6 GLU H 47 ILE H 52 -1 O ILE H 52 N TRP H 35 SHEET 6 AA8 6 THR H 58 TYR H 60 -1 O ASN H 59 N GLU H 51 SHEET 1 AA9 4 LEU H 11 VAL H 12 0 SHEET 2 AA9 4 THR H 124 VAL H 128 1 O THR H 127 N VAL H 12 SHEET 3 AA9 4 ALA H 92 ALA H 99 -1 N TYR H 94 O THR H 124 SHEET 4 AA9 4 VAL H 119 TRP H 120 -1 O VAL H 119 N ARG H 98 SHEET 1 AB1 4 SER H 137 LEU H 141 0 SHEET 2 AB1 4 THR H 152 TYR H 162 -1 O LYS H 160 N SER H 137 SHEET 3 AB1 4 TYR H 193 PRO H 202 -1 O VAL H 201 N ALA H 153 SHEET 4 AB1 4 VAL H 180 THR H 182 -1 N HIS H 181 O VAL H 198 SHEET 1 AB2 4 THR H 148 SER H 149 0 SHEET 2 AB2 4 THR H 152 TYR H 162 -1 O THR H 152 N SER H 149 SHEET 3 AB2 4 TYR H 193 PRO H 202 -1 O VAL H 201 N ALA H 153 SHEET 4 AB2 4 VAL H 186 LEU H 187 -1 N VAL H 186 O SER H 194 SHEET 1 AB3 3 THR H 168 TRP H 171 0 SHEET 2 AB3 3 ILE H 212 HIS H 217 -1 O ASN H 214 N SER H 170 SHEET 3 AB3 3 THR H 222 ARG H 227 -1 O VAL H 224 N VAL H 215 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 138 CYS L 197 1555 1555 2.04 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.08 SSBOND 4 CYS H 103 CYS H 108 1555 1555 2.05 SSBOND 5 CYS H 157 CYS H 213 1555 1555 2.03 CISPEP 1 TYR L 144 PRO L 145 0 3.28 CISPEP 2 PHE H 163 PRO H 164 0 -5.89 CISPEP 3 GLU H 165 PRO H 166 0 -0.91 CRYST1 47.770 70.030 65.650 90.00 108.21 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020934 0.000000 0.006885 0.00000 SCALE2 0.000000 0.014280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016035 0.00000