HEADER HYDROLASE/INHIBITOR 05-AUG-19 6Q1N TITLE GLUCOCEREBROSIDASE IN COMPLEX WITH PHARMACOLOGICAL CHAPERONE IMX8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYLCERAMIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLUCOCEREBROSIDASE; COMPND 5 EC: 3.2.1.45; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS PHARMACOLOGICAL CHAPERONE, GAUCHER DISEASE, GLYCOSIDASE, INHIBITOR, KEYWDS 2 PKA, HYDROLASE, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.VICKERS,S.G.WITHERS,A.B.BORASTON REVDAT 2 13-NOV-24 6Q1N 1 REMARK REVDAT 1 19-AUG-20 6Q1N 0 JRNL AUTH A.G.SANTANA,K.ROBINSON,C.VICKERS,H.CHEN,S.ZHOU,A.B.BORASTON, JRNL AUTH 2 L.A.CLARKE,S.G.WITHERS JRNL TITL PHARMACOLOGICAL CHAPERONES FOR GCASE THAT SWITCH JRNL TITL 2 CONFORMATION WITH PH ENHANCE ENZYME LEVELS IN GAUCHER ANIMAL JRNL TITL 3 MODELS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 44365 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9230 - 6.3449 1.00 3087 144 0.1957 0.2083 REMARK 3 2 6.3449 - 5.0440 0.99 2963 120 0.1883 0.2335 REMARK 3 3 5.0440 - 4.4086 0.97 2817 168 0.1506 0.1806 REMARK 3 4 4.4086 - 4.0066 0.96 2789 150 0.1613 0.1982 REMARK 3 5 4.0066 - 3.7200 0.96 2798 135 0.1707 0.2226 REMARK 3 6 3.7200 - 3.5010 0.98 2843 145 0.1796 0.2124 REMARK 3 7 3.5010 - 3.3259 0.98 2796 177 0.1996 0.2551 REMARK 3 8 3.3259 - 3.1813 1.00 2855 149 0.2048 0.2649 REMARK 3 9 3.1813 - 3.0590 0.99 2851 144 0.2330 0.2701 REMARK 3 10 3.0590 - 2.9535 0.99 2879 152 0.2392 0.2863 REMARK 3 11 2.9535 - 2.8612 0.98 2796 158 0.2423 0.3390 REMARK 3 12 2.8612 - 2.7795 0.91 2601 145 0.2420 0.3286 REMARK 3 13 2.7795 - 2.7064 0.82 2375 120 0.2390 0.2893 REMARK 3 14 2.7064 - 2.6404 0.73 2097 111 0.2448 0.3089 REMARK 3 15 2.6404 - 2.5804 0.66 1895 100 0.2440 0.3090 REMARK 3 16 2.5804 - 2.5260 0.60 1708 97 0.2504 0.3099 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Q1N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 R 200K-A REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48354 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.37600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M (NH4)2SO4, 0.1 M BIS TRIS (PH REMARK 280 4.9) CONTAINING 0.1 M CSCL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.90750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.90750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.96750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 142.53000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.96750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 142.53000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.90750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 54.96750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 142.53000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.90750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 54.96750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 142.53000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 791 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 857 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 314 REMARK 465 ASP A 315 REMARK 465 PHE A 316 REMARK 465 LEU A 317 REMARK 465 ALA A 318 REMARK 465 GLY A 344 REMARK 465 SER A 345 REMARK 465 LYS A 346 REMARK 465 SER B 345 REMARK 465 LYS B 346 REMARK 465 PHE B 347 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP A 312 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 312 CZ3 CH2 REMARK 470 PHE A 347 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 350 CG CD OE1 NE2 REMARK 470 ARG A 395 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 PHE B 31 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR B 63 CB OG1 CG2 REMARK 470 GLN B 166 CG CD OE1 NE2 REMARK 470 GLN B 169 CG CD OE1 NE2 REMARK 470 LEU B 314 CG CD1 CD2 REMARK 470 GLU B 349 CG CD OE1 OE2 REMARK 470 GLN B 350 CG CD OE1 NE2 REMARK 470 LYS B 441 CG CD CE NZ REMARK 470 LYS B 466 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 146 O5 NAG B 605 1.90 REMARK 500 OG1 THR A 252 O HOH A 701 2.03 REMARK 500 O7 NAG E 2 O HOH B 701 2.13 REMARK 500 N HIS A 255 O HOH A 701 2.15 REMARK 500 O2 SO4 A 620 O HOH A 702 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 735 O HOH A 882 3455 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 -152.04 -142.63 REMARK 500 PHE A 75 -129.79 -124.40 REMARK 500 ASN A 117 16.36 -142.08 REMARK 500 ALA A 124 -153.69 69.96 REMARK 500 PHE A 128 46.38 -90.51 REMARK 500 ALA A 136 79.99 -150.91 REMARK 500 ASP A 141 65.38 -118.14 REMARK 500 LEU A 156 -61.47 -104.04 REMARK 500 ASN A 192 -160.89 -126.20 REMARK 500 SER A 196 -166.06 -111.01 REMARK 500 GLU A 233 136.74 178.68 REMARK 500 GLU A 235 67.94 34.80 REMARK 500 ASP A 263 -67.03 -121.12 REMARK 500 HIS A 273 42.71 -99.49 REMARK 500 LEU A 281 -87.36 59.32 REMARK 500 THR A 323 -71.21 -106.74 REMARK 500 TRP A 381 -132.68 -86.13 REMARK 500 VAL A 394 -65.55 -103.60 REMARK 500 ARG A 395 -38.63 176.82 REMARK 500 ASN A 396 84.39 -55.22 REMARK 500 VAL A 477 -57.46 -125.09 REMARK 500 TYR B 11 -168.12 -100.80 REMARK 500 PHE B 75 -144.03 -120.33 REMARK 500 ALA B 124 -156.82 67.22 REMARK 500 CYS B 126 -159.81 -131.33 REMARK 500 ALA B 136 73.32 -152.84 REMARK 500 GLU B 233 136.94 174.85 REMARK 500 LEU B 281 -84.07 67.12 REMARK 500 LEU B 314 38.65 -93.25 REMARK 500 THR B 323 -75.43 -108.72 REMARK 500 HIS B 374 1.05 81.10 REMARK 500 TRP B 381 -129.40 -76.86 REMARK 500 LEU B 436 103.78 -161.30 REMARK 500 VAL B 477 -42.58 -142.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 6Q1N A 1 497 UNP B2R6A7 B2R6A7_HUMAN 40 536 DBREF 6Q1N B 1 497 UNP B2R6A7 B2R6A7_HUMAN 40 536 SEQRES 1 A 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 A 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 A 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 A 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 A 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 A 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 A 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 A 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 A 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 A 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 A 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 A 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 A 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 A 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 A 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 A 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 A 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 A 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 A 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 A 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 A 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 A 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 A 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 A 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 A 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 A 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 A 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 A 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 A 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 A 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 A 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 A 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 A 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 A 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 A 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 A 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 A 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 A 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 A 497 HIS ARG GLN SEQRES 1 B 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 B 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 B 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 B 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 B 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 B 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 B 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 B 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 B 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 B 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 B 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 B 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 B 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 B 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 B 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 B 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 B 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 B 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 B 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 B 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 B 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 B 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 B 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 B 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 B 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 B 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 B 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 B 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 B 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 B 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 B 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 B 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 B 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 B 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 B 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 B 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 B 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 B 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 B 497 HIS ARG GLN HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET FUC D 2 10 HET NAG E 1 14 HET NAG E 2 14 HET MAN E 3 11 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HET EDO A 610 4 HET EDO A 611 4 HET EDO A 612 4 HET EDO A 613 4 HET SO4 A 614 5 HET SO4 A 615 5 HET SO4 A 616 5 HET SO4 A 617 5 HET SO4 A 618 5 HET SO4 A 619 5 HET SO4 A 620 5 HET P9V A 621 13 HET NAG B 604 14 HET NAG B 605 14 HET EDO B 606 4 HET EDO B 607 4 HET EDO B 608 4 HET EDO B 609 4 HET EDO B 610 4 HET EDO B 611 4 HET EDO B 612 4 HET SO4 B 613 5 HET SO4 B 614 5 HET SO4 B 615 5 HET SO4 B 616 5 HET SO4 B 617 5 HET SO4 B 618 5 HET SO4 B 619 5 HET SO4 B 620 5 HET SO4 B 621 5 HET SO4 B 622 5 HET P9V B 623 13 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM P9V (2R,3S,4S,5R)-2-[2-(METHYLSULFANYL)ETHYL]PIPERIDINE-3, HETNAM 2 P9V 4,5-TRIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 7(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 5 MAN C6 H12 O6 FORMUL 6 EDO 16(C2 H6 O2) FORMUL 15 SO4 17(O4 S 2-) FORMUL 22 P9V 2(C8 H17 N O3 S) FORMUL 43 HOH *355(H2 O) HELIX 1 AA1 THR A 86 ALA A 95 1 10 HELIX 2 AA2 SER A 97 SER A 110 1 14 HELIX 3 AA3 PRO A 150 LYS A 155 1 6 HELIX 4 AA4 LEU A 156 ALA A 168 1 13 HELIX 5 AA5 PRO A 182 LYS A 186 5 5 HELIX 6 AA6 ASP A 203 HIS A 223 1 21 HELIX 7 AA7 GLU A 235 LEU A 241 5 7 HELIX 8 AA8 THR A 252 ASP A 263 1 12 HELIX 9 AA9 ASP A 263 ASN A 270 1 8 HELIX 10 AB1 LEU A 286 LEU A 288 5 3 HELIX 11 AB2 PRO A 289 ASP A 298 1 10 HELIX 12 AB3 ASP A 298 LYS A 303 1 6 HELIX 13 AB4 ALA A 320 PHE A 331 1 12 HELIX 14 AB5 SER A 356 LEU A 372 1 17 HELIX 15 AB6 ILE A 406 ASP A 409 5 4 HELIX 16 AB7 GLN A 414 LYS A 425 1 12 HELIX 17 AB8 THR B 86 ALA B 95 1 10 HELIX 18 AB9 SER B 97 SER B 110 1 14 HELIX 19 AC1 PRO B 150 LYS B 155 1 6 HELIX 20 AC2 LEU B 156 ALA B 168 1 13 HELIX 21 AC3 PRO B 182 LYS B 186 5 5 HELIX 22 AC4 ASP B 203 HIS B 223 1 21 HELIX 23 AC5 GLU B 235 LEU B 241 5 7 HELIX 24 AC6 THR B 252 ASP B 263 1 12 HELIX 25 AC7 ASP B 263 ASN B 270 1 8 HELIX 26 AC8 LEU B 286 LEU B 288 5 3 HELIX 27 AC9 PRO B 289 THR B 297 1 9 HELIX 28 AD1 ASP B 298 LYS B 303 1 6 HELIX 29 AD2 TYR B 313 PHE B 316 5 4 HELIX 30 AD3 PRO B 319 PHE B 331 1 13 HELIX 31 AD4 SER B 356 TYR B 373 1 18 HELIX 32 AD5 ILE B 406 ASP B 409 5 4 HELIX 33 AD6 GLN B 414 LYS B 425 1 12 SHEET 1 AA1 4 PRO A 6 LYS A 7 0 SHEET 2 AA1 4 VAL A 15 CYS A 18 -1 O VAL A 15 N LYS A 7 SHEET 3 AA1 4 THR A 410 LYS A 413 -1 O PHE A 411 N CYS A 18 SHEET 4 AA1 4 ILE A 402 ASP A 405 -1 N ASP A 405 O THR A 410 SHEET 1 AA2 9 GLU A 50 PRO A 55 0 SHEET 2 AA2 9 THR A 36 THR A 43 -1 N ARG A 39 O SER A 52 SHEET 3 AA2 9 SER A 488 TRP A 494 -1 O LEU A 493 N SER A 38 SHEET 4 AA2 9 ALA A 456 ASN A 462 -1 N ASN A 462 O SER A 488 SHEET 5 AA2 9 ASP A 445 MET A 450 -1 N ASP A 445 O LEU A 461 SHEET 6 AA2 9 GLN A 432 ALA A 438 -1 N GLN A 432 O MET A 450 SHEET 7 AA2 9 LEU A 65 LYS A 77 -1 N PHE A 75 O ARG A 433 SHEET 8 AA2 9 VAL A 468 ASP A 474 1 O LYS A 473 N LEU A 69 SHEET 9 AA2 9 GLY A 478 SER A 484 -1 O SER A 484 N VAL A 468 SHEET 1 AA3 9 GLY A 80 ALA A 84 0 SHEET 2 AA3 9 ILE A 118 MET A 123 1 O ARG A 120 N GLY A 83 SHEET 3 AA3 9 SER A 173 PRO A 178 1 O LEU A 175 N VAL A 121 SHEET 4 AA3 9 ALA A 229 THR A 231 1 O THR A 231 N ALA A 176 SHEET 5 AA3 9 ARG A 277 GLN A 284 1 O ARG A 277 N VAL A 230 SHEET 6 AA3 9 GLY A 307 HIS A 311 1 O HIS A 311 N ASP A 283 SHEET 7 AA3 9 MET A 335 GLU A 340 1 O MET A 335 N ILE A 308 SHEET 8 AA3 9 VAL A 375 ASN A 382 1 O GLY A 377 N ALA A 338 SHEET 9 AA3 9 GLY A 80 ALA A 84 1 N GLY A 82 O ASP A 380 SHEET 1 AA4 4 PRO B 6 LYS B 7 0 SHEET 2 AA4 4 VAL B 15 CYS B 18 -1 O VAL B 15 N LYS B 7 SHEET 3 AA4 4 THR B 410 LYS B 413 -1 O LYS B 413 N CYS B 16 SHEET 4 AA4 4 ILE B 402 ASP B 405 -1 N ASP B 405 O THR B 410 SHEET 1 AA5 9 GLU B 50 PRO B 55 0 SHEET 2 AA5 9 THR B 36 THR B 43 -1 N ARG B 39 O SER B 52 SHEET 3 AA5 9 SER B 488 TRP B 494 -1 O LEU B 493 N SER B 38 SHEET 4 AA5 9 ALA B 456 ASN B 462 -1 N VAL B 458 O TYR B 492 SHEET 5 AA5 9 LEU B 444 MET B 450 -1 N ASP B 445 O LEU B 461 SHEET 6 AA5 9 GLN B 432 ALA B 438 -1 N GLN B 432 O MET B 450 SHEET 7 AA5 9 LEU B 65 LYS B 77 -1 N THR B 68 O VAL B 437 SHEET 8 AA5 9 VAL B 468 ASP B 474 1 O LYS B 473 N LEU B 69 SHEET 9 AA5 9 GLY B 478 SER B 484 -1 O GLY B 478 N ASP B 474 SHEET 1 AA6 9 GLY B 80 ALA B 84 0 SHEET 2 AA6 9 ILE B 118 MET B 123 1 O ARG B 120 N GLY B 83 SHEET 3 AA6 9 SER B 173 PRO B 178 1 O LEU B 175 N VAL B 121 SHEET 4 AA6 9 ALA B 229 THR B 231 1 O THR B 231 N ALA B 176 SHEET 5 AA6 9 ARG B 277 GLN B 284 1 O LEU B 279 N VAL B 230 SHEET 6 AA6 9 GLY B 307 HIS B 311 1 O ALA B 309 N MET B 280 SHEET 7 AA6 9 MET B 335 GLU B 340 1 O MET B 335 N ILE B 308 SHEET 8 AA6 9 VAL B 375 ASN B 382 1 O VAL B 376 N LEU B 336 SHEET 9 AA6 9 GLY B 80 ALA B 84 1 N GLY B 82 O ASP B 380 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.04 SSBOND 2 CYS A 18 CYS A 23 1555 1555 2.04 SSBOND 3 CYS B 4 CYS B 16 1555 1555 2.04 SSBOND 4 CYS B 18 CYS B 23 1555 1555 2.05 LINK ND2 ASN A 19 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 59 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 19 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 59 C1 NAG B 604 1555 1555 1.44 LINK ND2 ASN B 146 C1 NAG B 605 1555 1555 1.41 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O6 NAG D 1 C1 FUC D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 MAN E 3 1555 1555 1.45 CISPEP 1 LEU A 288 PRO A 289 0 3.45 CISPEP 2 GLY A 390 PRO A 391 0 4.72 CISPEP 3 LEU B 288 PRO B 289 0 2.40 CISPEP 4 GLY B 390 PRO B 391 0 4.34 CRYST1 109.935 285.060 91.815 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003508 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010891 0.00000