data_6Q2Z # _entry.id 6Q2Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6Q2Z pdb_00006q2z 10.2210/pdb6q2z/pdb WWPDB D_1200013138 ? ? BMRB 34334 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR solution structure of the HVO_2922 protein from Haloferax volcanii' _pdbx_database_related.db_id 34334 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6Q2Z _pdbx_database_status.recvd_initial_deposition_date 2018-12-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kubatova, N.' 1 ? 'Jonker, H.R.A.' 2 ? 'Saxena, K.' 3 ? 'Richter, C.' 4 ? 'Marchfelder, A.' 5 ? 'Schwalbe, H.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chembiochem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1439-7633 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 21 _citation.language ? _citation.page_first 149 _citation.page_last 156 _citation.title 'Solution Structure and Dynamics of the Small Protein HVO_2922 from Haloferax volcanii.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cbic.201900085 _citation.pdbx_database_id_PubMed 31161645 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kubatova, N.' 1 ? primary 'Jonker, H.R.A.' 2 ? primary 'Saxena, K.' 3 ? primary 'Richter, C.' 4 ? primary 'Vogel, V.' 5 ? primary 'Schreiber, S.' 6 ? primary 'Marchfelder, A.' 7 ? primary 'Schwalbe, H.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'UPF0339 family protein' _entity.formula_weight 6686.416 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'conserved hypothetical protein HVO_2922 from Haloferax volcanii' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MNKAHFEVFVDAADKYRWRLVHDNGNILADSGEGYASKQKAKQGIESVKRNAPDADVIEA _entity_poly.pdbx_seq_one_letter_code_can MNKAHFEVFVDAADKYRWRLVHDNGNILADSGEGYASKQKAKQGIESVKRNAPDADVIEA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 LYS n 1 4 ALA n 1 5 HIS n 1 6 PHE n 1 7 GLU n 1 8 VAL n 1 9 PHE n 1 10 VAL n 1 11 ASP n 1 12 ALA n 1 13 ALA n 1 14 ASP n 1 15 LYS n 1 16 TYR n 1 17 ARG n 1 18 TRP n 1 19 ARG n 1 20 LEU n 1 21 VAL n 1 22 HIS n 1 23 ASP n 1 24 ASN n 1 25 GLY n 1 26 ASN n 1 27 ILE n 1 28 LEU n 1 29 ALA n 1 30 ASP n 1 31 SER n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 TYR n 1 36 ALA n 1 37 SER n 1 38 LYS n 1 39 GLN n 1 40 LYS n 1 41 ALA n 1 42 LYS n 1 43 GLN n 1 44 GLY n 1 45 ILE n 1 46 GLU n 1 47 SER n 1 48 VAL n 1 49 LYS n 1 50 ARG n 1 51 ASN n 1 52 ALA n 1 53 PRO n 1 54 ASP n 1 55 ALA n 1 56 ASP n 1 57 VAL n 1 58 ILE n 1 59 GLU n 1 60 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name 'Halobacterium volcanii' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene HVO_2922 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 309800 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 29605 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant T7-Express _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pE-SUMO _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D4GXU1_HALVD _struct_ref.pdbx_db_accession D4GXU1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MNKAHFEVFVDAADKYRWRLVHDNGNILADSGEGYASKQKAKQGIESVKRNAPDADVIEA _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Q2Z A 1 ? 60 ? D4GXU1 1 ? 60 ? 101 160 2 1 6Q2Z B 1 ? 60 ? D4GXU1 1 ? 60 ? 201 260 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 3 isotropic 3 1 1 '2D 1H-1H NOESY' 1 isotropic 4 1 1 '2D 1H-1H TOCSY' 1 isotropic 5 1 1 '3D 1H-15N NOESY' 1 isotropic 6 1 1 '3D 1H-15N TOCSY' 1 isotropic 7 1 1 '3D HNHA' 1 isotropic 8 1 1 '2D 1H-15N HETNOE' 1 isotropic 9 1 1 '2D 1H-15N T1' 1 isotropic 10 1 1 '2D 1H-15N T2' 1 isotropic 11 1 2 '3D HNCACB' 2 isotropic 12 1 2 '3D HN(COCA)CB' 2 isotropic 13 1 2 '3D HNCO' 2 isotropic 14 1 2 '3D (H)CC(CO)NH' 1 isotropic 15 1 2 '3D HCCH-TOCSY' 3 isotropic 16 1 2 '3D 1H-13C NOESY aliphatic' 3 isotropic 17 1 2 '3D 1H-13C TOCSY aromatic' 1 isotropic 18 1 2 '2D (HB)CB(CGCD)HD' 3 isotropic 19 1 2 '2D (HB)CB(CGCDCE)HE' 3 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units mbar _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 232 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label normal _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '5.0 mM [U-15N] HVO_2922, 50 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 95% H2O/5% D2O' '95% H2O/5% D2O' 15N solution '15N labeled HVO_2922 protein' 2 '2.0 mM [U-13C; U-15N] HVO_2922, 50 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 95% H2O/5% D2O' '95% H2O/5% D2O' 13C15N solution '13C15N labeled HVO_2922 protein' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'Avance Bruker 600' ? Bruker 600 cryoprobe 2 'Avance Bruker 700' ? Bruker 700 cryoprobe 3 'Avance Bruker 800' ? Bruker 800 cryoprobe # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 6Q2Z 'simulated annealing with torsion angle dynamics' 'structure determination' 8 6Q2Z 'cartesian angle dynamics' 'energy minimization' 9 6Q2Z 'molecular dynamics' 'refinement in water' 10 # _pdbx_nmr_ensemble.entry_id 6Q2Z _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6Q2Z _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin 3.5 'Bruker Biospin' 2 processing TopSpin 3.5 'Bruker Biospin' 3 'chemical shift assignment' Sparky 3.114 'Goddard and Kneller' 4 'peak picking' Sparky 3.114 'Goddard and Kneller' 5 'data analysis' Sparky 3.114 'Goddard and Kneller' 6 'data analysis' TALOS N 'Shen and Bax' 7 'data analysis' TENSOR 2 'Dosset, Marion, Blackledge' 8 'structure calculation' CYANA 3.97 'Guntert, Mumenthaler and Wuthrich' 9 'structure calculation' CNS 1.1 'Brunger, Adams, Clore, Gros, Nilges and Read' 10 refinement ARIA '1.2 HJ' ;Linge, O'Donoghue and Nilges ; # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Q2Z _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6Q2Z _struct.title 'NMR solution structure of the HVO_2922 protein from Haloferax volcanii' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Q2Z _struct_keywords.text 'conserved hypothetical protein, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 37 ? ARG A 50 ? SER A 137 ARG A 150 1 ? 14 HELX_P HELX_P2 AA2 SER B 37 ? ARG B 50 ? SER B 237 ARG B 250 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 27 ? ASP A 30 ? ILE A 127 ASP A 130 AA1 2 TYR A 16 ? HIS A 22 ? TYR A 116 HIS A 122 AA1 3 ALA A 4 ? VAL A 10 ? ALA A 104 VAL A 110 AA1 4 ASP B 56 ? GLU B 59 ? ASP B 256 GLU B 259 AA2 1 ASP A 56 ? GLU A 59 ? ASP A 156 GLU A 159 AA2 2 ALA B 4 ? VAL B 10 ? ALA B 204 VAL B 210 AA2 3 TYR B 16 ? HIS B 22 ? TYR B 216 HIS B 222 AA2 4 ILE B 27 ? ASP B 30 ? ILE B 227 ASP B 230 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 28 ? O LEU A 128 N LEU A 20 ? N LEU A 120 AA1 2 3 O ARG A 17 ? O ARG A 117 N PHE A 9 ? N PHE A 109 AA1 3 4 N VAL A 8 ? N VAL A 108 O ILE B 58 ? O ILE B 258 AA2 1 2 N ILE A 58 ? N ILE A 158 O VAL B 8 ? O VAL B 208 AA2 2 3 N PHE B 9 ? N PHE B 209 O ARG B 17 ? O ARG B 217 AA2 3 4 N LEU B 20 ? N LEU B 220 O LEU B 28 ? O LEU B 228 # _atom_sites.entry_id 6Q2Z _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 101 101 MET MET A . n A 1 2 ASN 2 102 102 ASN ASN A . n A 1 3 LYS 3 103 103 LYS LYS A . n A 1 4 ALA 4 104 104 ALA ALA A . n A 1 5 HIS 5 105 105 HIS HIS A . n A 1 6 PHE 6 106 106 PHE PHE A . n A 1 7 GLU 7 107 107 GLU GLU A . n A 1 8 VAL 8 108 108 VAL VAL A . n A 1 9 PHE 9 109 109 PHE PHE A . n A 1 10 VAL 10 110 110 VAL VAL A . n A 1 11 ASP 11 111 111 ASP ASP A . n A 1 12 ALA 12 112 112 ALA ALA A . n A 1 13 ALA 13 113 113 ALA ALA A . n A 1 14 ASP 14 114 114 ASP ASP A . n A 1 15 LYS 15 115 115 LYS LYS A . n A 1 16 TYR 16 116 116 TYR TYR A . n A 1 17 ARG 17 117 117 ARG ARG A . n A 1 18 TRP 18 118 118 TRP TRP A . n A 1 19 ARG 19 119 119 ARG ARG A . n A 1 20 LEU 20 120 120 LEU LEU A . n A 1 21 VAL 21 121 121 VAL VAL A . n A 1 22 HIS 22 122 122 HIS HIS A . n A 1 23 ASP 23 123 123 ASP ASP A . n A 1 24 ASN 24 124 124 ASN ASN A . n A 1 25 GLY 25 125 125 GLY GLY A . n A 1 26 ASN 26 126 126 ASN ASN A . n A 1 27 ILE 27 127 127 ILE ILE A . n A 1 28 LEU 28 128 128 LEU LEU A . n A 1 29 ALA 29 129 129 ALA ALA A . n A 1 30 ASP 30 130 130 ASP ASP A . n A 1 31 SER 31 131 131 SER SER A . n A 1 32 GLY 32 132 132 GLY GLY A . n A 1 33 GLU 33 133 133 GLU GLU A . n A 1 34 GLY 34 134 134 GLY GLY A . n A 1 35 TYR 35 135 135 TYR TYR A . n A 1 36 ALA 36 136 136 ALA ALA A . n A 1 37 SER 37 137 137 SER SER A . n A 1 38 LYS 38 138 138 LYS LYS A . n A 1 39 GLN 39 139 139 GLN GLN A . n A 1 40 LYS 40 140 140 LYS LYS A . n A 1 41 ALA 41 141 141 ALA ALA A . n A 1 42 LYS 42 142 142 LYS LYS A . n A 1 43 GLN 43 143 143 GLN GLN A . n A 1 44 GLY 44 144 144 GLY GLY A . n A 1 45 ILE 45 145 145 ILE ILE A . n A 1 46 GLU 46 146 146 GLU GLU A . n A 1 47 SER 47 147 147 SER SER A . n A 1 48 VAL 48 148 148 VAL VAL A . n A 1 49 LYS 49 149 149 LYS LYS A . n A 1 50 ARG 50 150 150 ARG ARG A . n A 1 51 ASN 51 151 151 ASN ASN A . n A 1 52 ALA 52 152 152 ALA ALA A . n A 1 53 PRO 53 153 153 PRO PRO A . n A 1 54 ASP 54 154 154 ASP ASP A . n A 1 55 ALA 55 155 155 ALA ALA A . n A 1 56 ASP 56 156 156 ASP ASP A . n A 1 57 VAL 57 157 157 VAL VAL A . n A 1 58 ILE 58 158 158 ILE ILE A . n A 1 59 GLU 59 159 159 GLU GLU A . n A 1 60 ALA 60 160 160 ALA ALA A . n B 1 1 MET 1 201 201 MET MET B . n B 1 2 ASN 2 202 202 ASN ASN B . n B 1 3 LYS 3 203 203 LYS LYS B . n B 1 4 ALA 4 204 204 ALA ALA B . n B 1 5 HIS 5 205 205 HIS HIS B . n B 1 6 PHE 6 206 206 PHE PHE B . n B 1 7 GLU 7 207 207 GLU GLU B . n B 1 8 VAL 8 208 208 VAL VAL B . n B 1 9 PHE 9 209 209 PHE PHE B . n B 1 10 VAL 10 210 210 VAL VAL B . n B 1 11 ASP 11 211 211 ASP ASP B . n B 1 12 ALA 12 212 212 ALA ALA B . n B 1 13 ALA 13 213 213 ALA ALA B . n B 1 14 ASP 14 214 214 ASP ASP B . n B 1 15 LYS 15 215 215 LYS LYS B . n B 1 16 TYR 16 216 216 TYR TYR B . n B 1 17 ARG 17 217 217 ARG ARG B . n B 1 18 TRP 18 218 218 TRP TRP B . n B 1 19 ARG 19 219 219 ARG ARG B . n B 1 20 LEU 20 220 220 LEU LEU B . n B 1 21 VAL 21 221 221 VAL VAL B . n B 1 22 HIS 22 222 222 HIS HIS B . n B 1 23 ASP 23 223 223 ASP ASP B . n B 1 24 ASN 24 224 224 ASN ASN B . n B 1 25 GLY 25 225 225 GLY GLY B . n B 1 26 ASN 26 226 226 ASN ASN B . n B 1 27 ILE 27 227 227 ILE ILE B . n B 1 28 LEU 28 228 228 LEU LEU B . n B 1 29 ALA 29 229 229 ALA ALA B . n B 1 30 ASP 30 230 230 ASP ASP B . n B 1 31 SER 31 231 231 SER SER B . n B 1 32 GLY 32 232 232 GLY GLY B . n B 1 33 GLU 33 233 233 GLU GLU B . n B 1 34 GLY 34 234 234 GLY GLY B . n B 1 35 TYR 35 235 235 TYR TYR B . n B 1 36 ALA 36 236 236 ALA ALA B . n B 1 37 SER 37 237 237 SER SER B . n B 1 38 LYS 38 238 238 LYS LYS B . n B 1 39 GLN 39 239 239 GLN GLN B . n B 1 40 LYS 40 240 240 LYS LYS B . n B 1 41 ALA 41 241 241 ALA ALA B . n B 1 42 LYS 42 242 242 LYS LYS B . n B 1 43 GLN 43 243 243 GLN GLN B . n B 1 44 GLY 44 244 244 GLY GLY B . n B 1 45 ILE 45 245 245 ILE ILE B . n B 1 46 GLU 46 246 246 GLU GLU B . n B 1 47 SER 47 247 247 SER SER B . n B 1 48 VAL 48 248 248 VAL VAL B . n B 1 49 LYS 49 249 249 LYS LYS B . n B 1 50 ARG 50 250 250 ARG ARG B . n B 1 51 ASN 51 251 251 ASN ASN B . n B 1 52 ALA 52 252 252 ALA ALA B . n B 1 53 PRO 53 253 253 PRO PRO B . n B 1 54 ASP 54 254 254 ASP ASP B . n B 1 55 ALA 55 255 255 ALA ALA B . n B 1 56 ASP 56 256 256 ASP ASP B . n B 1 57 VAL 57 257 257 VAL VAL B . n B 1 58 ILE 58 258 258 ILE ILE B . n B 1 59 GLU 59 259 259 GLU GLU B . n B 1 60 ALA 60 260 260 ALA ALA B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3180 ? 1 MORE -18 ? 1 'SSA (A^2)' 6650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-12 2 'Structure model' 1 1 2020-01-29 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' database_2 3 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation.year' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' 8 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 HVO_2922 5.0 ? mM '[U-15N]' 1 'sodium phosphate' 50 ? mM 'natural abundance' 1 'sodium chloride' 100 ? mM 'natural abundance' 1 DTT 3 ? mM 'natural abundance' 2 HVO_2922 2.0 ? mM '[U-13C; U-15N]' 2 'sodium phosphate' 50 ? mM 'natural abundance' 2 'sodium chloride' 100 ? mM 'natural abundance' 2 DTT 3 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B VAL 248 ? ? H B ALA 252 ? ? 1.58 2 2 O A VAL 148 ? ? H A ALA 152 ? ? 1.59 3 3 OE2 A GLU 133 ? ? HH A TYR 135 ? ? 1.60 4 4 O B VAL 248 ? ? H B ALA 252 ? ? 1.59 5 7 HH12 A ARG 117 ? ? OD1 A ASP 130 ? ? 1.57 6 8 O A VAL 148 ? ? H A ALA 152 ? ? 1.59 7 9 HH12 A ARG 117 ? ? OD1 A ASP 130 ? ? 1.57 8 9 O A VAL 148 ? ? H A ALA 152 ? ? 1.59 9 9 HH21 B ARG 217 ? ? OD1 B ASP 230 ? ? 1.60 10 10 O B VAL 248 ? ? H B ALA 252 ? ? 1.60 11 11 HH12 A ARG 117 ? ? OD1 A ASP 130 ? ? 1.60 12 12 HE B ARG 219 ? ? OD2 B ASP 230 ? ? 1.55 13 12 HE A ARG 119 ? ? OD2 A ASP 130 ? ? 1.56 14 13 HE B ARG 219 ? ? OD2 B ASP 230 ? ? 1.59 15 13 OE1 A GLU 159 ? ? HZ1 B LYS 238 ? ? 1.59 16 13 OE2 A GLU 133 ? ? HH A TYR 135 ? ? 1.60 17 14 HZ3 A LYS 138 ? ? OE1 B GLU 259 ? ? 1.59 18 15 O B VAL 248 ? ? H B ALA 252 ? ? 1.59 19 16 OD1 A ASP 130 ? ? H A GLY 132 ? ? 1.59 20 17 HH22 B ARG 217 ? ? OD1 B ASP 230 ? ? 1.59 21 18 O A VAL 148 ? ? H A ALA 152 ? ? 1.60 22 19 HZ2 A LYS 138 ? ? OE1 B GLU 259 ? ? 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 114 ? ? 71.27 36.12 2 1 ASN A 151 ? ? -136.91 -39.12 3 1 HIS B 205 ? ? -170.95 148.16 4 1 ASP B 214 ? ? 70.42 41.71 5 1 ASN B 251 ? ? -135.82 -37.39 6 2 ASN A 151 ? ? -137.03 -37.93 7 2 ASN B 251 ? ? -136.42 -40.09 8 3 ASN A 151 ? ? -135.19 -39.50 9 3 ASN B 251 ? ? -137.01 -38.31 10 4 ASN A 151 ? ? -133.04 -39.33 11 4 ASN B 251 ? ? -131.32 -37.50 12 5 ASP A 114 ? ? 72.05 33.36 13 5 ASN A 151 ? ? -134.34 -40.89 14 5 HIS B 205 ? ? -170.26 148.08 15 5 ASN B 251 ? ? -132.71 -40.58 16 6 ASN A 151 ? ? -132.94 -39.58 17 6 ASN B 251 ? ? -130.83 -40.33 18 7 HIS A 105 ? ? -170.56 148.79 19 7 ASP A 114 ? ? 71.11 36.18 20 7 ASN A 151 ? ? -133.45 -37.88 21 7 HIS B 205 ? ? -170.92 148.61 22 7 ASP B 214 ? ? 70.04 36.84 23 7 ASN B 251 ? ? -135.48 -37.45 24 8 ASN A 102 ? ? 172.07 172.27 25 8 ASP A 114 ? ? 70.25 33.17 26 8 HIS B 205 ? ? -170.27 146.38 27 9 ASN A 102 ? ? 170.47 171.71 28 9 HIS A 105 ? ? -170.10 144.54 29 9 ASN A 151 ? ? -137.24 -42.42 30 9 ASN B 251 ? ? -135.66 -37.73 31 10 ASN A 151 ? ? -131.58 -39.14 32 10 ASP B 214 ? ? 70.17 36.10 33 11 ASP A 114 ? ? 71.10 35.20 34 11 ASN A 151 ? ? -135.52 -37.77 35 11 ASP B 214 ? ? 71.13 34.67 36 11 ASN B 251 ? ? -130.08 -39.40 37 12 ASP A 114 ? ? 71.33 35.18 38 12 ASN A 151 ? ? -137.04 -37.20 39 12 ASN B 251 ? ? -135.65 -36.36 40 13 ASP A 114 ? ? 70.62 33.18 41 13 ASN A 151 ? ? -132.02 -40.58 42 13 HIS B 205 ? ? -170.70 147.59 43 14 HIS A 105 ? ? -170.53 148.36 44 14 ASN A 151 ? ? -131.62 -37.53 45 15 ASN A 151 ? ? -138.91 -37.51 46 16 HIS A 105 ? ? -172.02 149.41 47 16 ASP A 114 ? ? 71.30 35.53 48 16 ASN A 151 ? ? -134.39 -39.14 49 16 HIS B 205 ? ? -170.96 149.94 50 16 ASP B 214 ? ? 70.46 36.15 51 16 ASN B 251 ? ? -135.36 -42.74 52 17 HIS A 105 ? ? -170.29 147.88 53 17 ASP A 114 ? ? 71.00 38.25 54 17 ASN A 151 ? ? -138.07 -38.63 55 17 HIS B 205 ? ? -171.34 149.10 56 18 ASN A 102 ? ? 171.03 168.65 57 18 HIS A 105 ? ? -170.23 145.42 58 18 ASN A 151 ? ? -133.74 -37.08 59 18 HIS B 205 ? ? -170.04 146.99 60 18 ASN B 251 ? ? -130.46 -38.37 61 19 ASP A 114 ? ? 70.82 34.77 62 19 HIS B 205 ? ? -170.01 147.79 63 19 ASN B 251 ? ? -130.85 -40.46 64 20 HIS A 105 ? ? -171.69 147.90 65 20 ASP A 114 ? ? 70.91 36.42 66 20 ASN A 151 ? ? -131.87 -40.07 67 20 HIS B 205 ? ? -170.21 148.54 68 20 ASN B 251 ? ? -135.90 -36.97 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation' Germany 'SPP 2002 priority program - 313752925' 1 ? Germany 'State of Hesse - BMRZ' 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details 'heteronuclear relaxation' #