HEADER HYDROLASE 04-DEC-18 6Q3T TITLE STRUCTURE OF PROTEASE1 FROM PYROCOCCUS HORIKOSHII AT ROOM TEMPERATURE TITLE 2 IN CHIPX MICROFLUIDIC DEVICE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEGLYCASE PH1704; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: INTRACELLULAR PROTEASE PH1704, PROTEASE1; COMPND 5 EC: 3.5.1.124,3.4.22.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 53953; SOURCE 4 GENE: PH1704; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHIPX, NUCLEATION, XO4, CRYSTALLOPHORE, ROOM TEMPERATURE, KEYWDS 2 COUNTERDIFFUSION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.DE WIJN,S.ENGILBERGE,V.OLIERIC,E.GIRARD,C.SAUTER REVDAT 4 24-JAN-24 6Q3T 1 REMARK REVDAT 3 05-JUN-19 6Q3T 1 COMPND SOURCE DBREF SEQADV REVDAT 2 29-MAY-19 6Q3T 1 JRNL REVDAT 1 01-MAY-19 6Q3T 0 JRNL AUTH R.DE WIJN,O.HENNIG,J.ROCHE,S.ENGILBERGE,K.ROLLET, JRNL AUTH 2 P.FERNANDEZ-MILLAN,K.BRILLET,H.BETAT,M.MORL,A.ROUSSEL, JRNL AUTH 3 E.GIRARD,C.MUELLER-DIECKMANN,G.C.FOX,V.OLIERIC,J.A.GAVIRA, JRNL AUTH 4 B.LORBER,C.SAUTER JRNL TITL A SIMPLE AND VERSATILE MICROFLUIDIC DEVICE FOR EFFICIENT JRNL TITL 2 BIOMACROMOLECULE CRYSTALLIZATION AND STRUCTURAL ANALYSIS BY JRNL TITL 3 SERIAL CRYSTALLOGRAPHY. JRNL REF IUCRJ V. 6 454 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31098026 JRNL DOI 10.1107/S2052252519003622 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 57659 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8010 - 5.9277 0.94 2703 160 0.1509 0.1772 REMARK 3 2 5.9277 - 4.7065 0.96 2650 127 0.1301 0.1254 REMARK 3 3 4.7065 - 4.1120 0.97 2600 148 0.1110 0.1421 REMARK 3 4 4.1120 - 3.7362 0.97 2618 127 0.1269 0.1514 REMARK 3 5 3.7362 - 3.4685 0.98 2602 141 0.1452 0.1698 REMARK 3 6 3.4685 - 3.2641 0.98 2619 131 0.1554 0.1707 REMARK 3 7 3.2641 - 3.1007 0.98 2606 125 0.1721 0.1838 REMARK 3 8 3.1007 - 2.9657 0.98 2556 171 0.1834 0.1971 REMARK 3 9 2.9657 - 2.8516 0.98 2596 132 0.1866 0.2192 REMARK 3 10 2.8516 - 2.7532 0.98 2613 131 0.1882 0.2156 REMARK 3 11 2.7532 - 2.6671 0.99 2598 145 0.1911 0.2035 REMARK 3 12 2.6671 - 2.5909 0.99 2585 135 0.1875 0.2047 REMARK 3 13 2.5909 - 2.5227 0.99 2598 150 0.1892 0.2016 REMARK 3 14 2.5227 - 2.4611 0.99 2601 124 0.2099 0.2924 REMARK 3 15 2.4611 - 2.4052 0.99 2592 146 0.2236 0.2953 REMARK 3 16 2.4052 - 2.3540 0.99 2595 141 0.2323 0.2744 REMARK 3 17 2.3540 - 2.3069 0.99 2609 135 0.2438 0.2982 REMARK 3 18 2.3069 - 2.2634 0.99 2577 154 0.2492 0.2535 REMARK 3 19 2.2634 - 2.2230 0.99 2571 143 0.2656 0.2754 REMARK 3 20 2.2230 - 2.1853 1.00 2611 129 0.2846 0.3136 REMARK 3 21 2.1853 - 2.1500 0.99 2647 117 0.3102 0.3285 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4014 REMARK 3 ANGLE : 1.095 5438 REMARK 3 CHIRALITY : 0.063 597 REMARK 3 PLANARITY : 0.008 698 REMARK 3 DIHEDRAL : 20.411 1484 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 92.1477 86.0926 17.7843 REMARK 3 T TENSOR REMARK 3 T11: 0.5467 T22: 0.3720 REMARK 3 T33: 0.3204 T12: -0.0081 REMARK 3 T13: -0.0230 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.2632 L22: 0.6502 REMARK 3 L33: 0.0791 L12: 0.1551 REMARK 3 L13: -0.1374 L23: -0.1610 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: 0.0447 S13: -0.0590 REMARK 3 S21: 0.2958 S22: 0.0220 S23: 0.0730 REMARK 3 S31: -0.0207 S32: -0.1027 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.9960 98.3858 17.5986 REMARK 3 T TENSOR REMARK 3 T11: 0.6079 T22: 0.3725 REMARK 3 T33: 0.3897 T12: -0.0019 REMARK 3 T13: -0.0708 T23: -0.0474 REMARK 3 L TENSOR REMARK 3 L11: 0.3944 L22: 0.5522 REMARK 3 L33: 0.4263 L12: 0.0613 REMARK 3 L13: -0.1957 L23: -0.4718 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: 0.0439 S13: 0.0600 REMARK 3 S21: 0.3045 S22: 0.0404 S23: -0.0010 REMARK 3 S31: -0.0864 S32: -0.0999 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 105.9420 95.5850 7.0298 REMARK 3 T TENSOR REMARK 3 T11: 0.4482 T22: 0.4151 REMARK 3 T33: 0.5061 T12: -0.0449 REMARK 3 T13: -0.0834 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.0778 L22: 0.0866 REMARK 3 L33: 0.6773 L12: -0.0121 REMARK 3 L13: 0.1313 L23: -0.2372 REMARK 3 S TENSOR REMARK 3 S11: -0.0546 S12: 0.2062 S13: 0.2172 REMARK 3 S21: 0.0917 S22: -0.0740 S23: -0.4606 REMARK 3 S31: -0.0075 S32: 0.2500 S33: -0.0007 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 107.8873 85.7194 14.4365 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.3878 REMARK 3 T33: 0.4289 T12: -0.0251 REMARK 3 T13: -0.1439 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.1929 L22: 0.1101 REMARK 3 L33: 0.1501 L12: 0.1569 REMARK 3 L13: -0.1762 L23: -0.1321 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.0976 S13: -0.0981 REMARK 3 S21: 0.1644 S22: -0.1349 S23: -0.3986 REMARK 3 S31: 0.0469 S32: 0.1599 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.4796 68.7635 11.7071 REMARK 3 T TENSOR REMARK 3 T11: 0.4401 T22: 0.3613 REMARK 3 T33: 0.3928 T12: 0.0011 REMARK 3 T13: -0.0496 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.0021 L22: 0.3262 REMARK 3 L33: 0.0862 L12: -0.0207 REMARK 3 L13: 0.0342 L23: -0.1783 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: 0.1250 S13: 0.0675 REMARK 3 S21: -0.0039 S22: -0.0783 S23: -0.2162 REMARK 3 S31: 0.0348 S32: 0.0052 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.3965 64.6426 5.0416 REMARK 3 T TENSOR REMARK 3 T11: 0.5746 T22: 0.4871 REMARK 3 T33: 0.4842 T12: -0.0194 REMARK 3 T13: -0.0311 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.1432 L22: 0.1160 REMARK 3 L33: 0.0845 L12: 0.0110 REMARK 3 L13: -0.1119 L23: -0.0255 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.1640 S13: 0.1684 REMARK 3 S21: -0.2687 S22: -0.0478 S23: -0.3156 REMARK 3 S31: -0.0100 S32: 0.1604 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.3337 62.6197 4.3458 REMARK 3 T TENSOR REMARK 3 T11: 0.5142 T22: 0.4237 REMARK 3 T33: 0.5203 T12: 0.0105 REMARK 3 T13: 0.0217 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.0355 L22: 0.1155 REMARK 3 L33: 0.3077 L12: 0.0228 REMARK 3 L13: 0.1059 L23: 0.0415 REMARK 3 S TENSOR REMARK 3 S11: -0.1011 S12: 0.0809 S13: -0.0598 REMARK 3 S21: -0.3129 S22: 0.0064 S23: -0.2372 REMARK 3 S31: 0.0281 S32: 0.0312 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 92.2294 59.1821 11.1086 REMARK 3 T TENSOR REMARK 3 T11: 0.4747 T22: 0.3833 REMARK 3 T33: 0.4865 T12: 0.0184 REMARK 3 T13: -0.0567 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 0.1889 L22: 0.3094 REMARK 3 L33: 0.3224 L12: 0.1847 REMARK 3 L13: -0.2213 L23: -0.1002 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0500 S13: 0.2518 REMARK 3 S21: 0.0507 S22: -0.0279 S23: -0.0650 REMARK 3 S31: -0.0243 S32: 0.0416 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.0427 50.7177 13.6697 REMARK 3 T TENSOR REMARK 3 T11: 0.5583 T22: 0.4123 REMARK 3 T33: 0.5708 T12: 0.0168 REMARK 3 T13: -0.0348 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.0422 L22: 0.0015 REMARK 3 L33: 0.0154 L12: -0.0131 REMARK 3 L13: 0.0271 L23: -0.0083 REMARK 3 S TENSOR REMARK 3 S11: 0.1132 S12: 0.1546 S13: -0.2740 REMARK 3 S21: 0.1682 S22: 0.2056 S23: -0.5113 REMARK 3 S31: 0.3939 S32: 0.3914 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.5375 56.9447 21.8403 REMARK 3 T TENSOR REMARK 3 T11: 0.5039 T22: 0.3873 REMARK 3 T33: 0.4003 T12: 0.0155 REMARK 3 T13: -0.0344 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 0.0744 L22: 0.1830 REMARK 3 L33: 0.0992 L12: -0.0396 REMARK 3 L13: -0.0466 L23: -0.0935 REMARK 3 S TENSOR REMARK 3 S11: 0.1246 S12: -0.0228 S13: 0.0268 REMARK 3 S21: 0.2591 S22: -0.0438 S23: 0.1065 REMARK 3 S31: -0.0131 S32: -0.0177 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.3361 62.2362 29.7976 REMARK 3 T TENSOR REMARK 3 T11: 0.8000 T22: 0.5324 REMARK 3 T33: 0.4398 T12: 0.0048 REMARK 3 T13: 0.0144 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.0427 L22: 0.0068 REMARK 3 L33: 0.0540 L12: 0.0074 REMARK 3 L13: -0.0027 L23: 0.0174 REMARK 3 S TENSOR REMARK 3 S11: -0.0628 S12: -0.4776 S13: -0.0707 REMARK 3 S21: 0.2646 S22: 0.0932 S23: 0.2065 REMARK 3 S31: -0.1604 S32: 0.0063 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.9731 66.8498 24.6164 REMARK 3 T TENSOR REMARK 3 T11: 0.5908 T22: 0.4132 REMARK 3 T33: 0.3909 T12: -0.0050 REMARK 3 T13: -0.1274 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.1373 L22: 0.1420 REMARK 3 L33: 0.2722 L12: 0.1131 REMARK 3 L13: -0.1855 L23: -0.2024 REMARK 3 S TENSOR REMARK 3 S11: 0.0836 S12: -0.1666 S13: -0.2341 REMARK 3 S21: 0.4264 S22: -0.1062 S23: -0.0834 REMARK 3 S31: -0.1771 S32: 0.1429 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.8950 62.5814 8.8015 REMARK 3 T TENSOR REMARK 3 T11: 0.4644 T22: 0.5116 REMARK 3 T33: 0.7937 T12: 0.0520 REMARK 3 T13: -0.0058 T23: 0.1514 REMARK 3 L TENSOR REMARK 3 L11: 0.1245 L22: 0.0818 REMARK 3 L33: 0.3634 L12: -0.0589 REMARK 3 L13: 0.0817 L23: -0.0687 REMARK 3 S TENSOR REMARK 3 S11: 0.1379 S12: -0.0799 S13: 0.0142 REMARK 3 S21: 0.1204 S22: 0.2754 S23: 0.2214 REMARK 3 S31: -0.1620 S32: -0.1359 S33: 0.0221 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.0720 68.0154 15.7254 REMARK 3 T TENSOR REMARK 3 T11: 0.5114 T22: 0.5743 REMARK 3 T33: 0.7906 T12: 0.1219 REMARK 3 T13: 0.1010 T23: 0.1049 REMARK 3 L TENSOR REMARK 3 L11: 0.2890 L22: 0.0681 REMARK 3 L33: 0.2813 L12: -0.0148 REMARK 3 L13: 0.2795 L23: 0.0309 REMARK 3 S TENSOR REMARK 3 S11: -0.0155 S12: -0.0187 S13: 0.3092 REMARK 3 S21: 0.0254 S22: 0.2861 S23: 0.3219 REMARK 3 S31: -0.3413 S32: -0.3500 S33: 0.0029 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 62 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.0290 53.8192 17.6502 REMARK 3 T TENSOR REMARK 3 T11: 0.4550 T22: 0.4315 REMARK 3 T33: 0.6500 T12: 0.0080 REMARK 3 T13: 0.0080 T23: 0.1437 REMARK 3 L TENSOR REMARK 3 L11: 0.8461 L22: 0.2515 REMARK 3 L33: 0.6576 L12: -0.3960 REMARK 3 L13: 0.6384 L23: -0.1809 REMARK 3 S TENSOR REMARK 3 S11: 0.1348 S12: -0.1902 S13: -0.2220 REMARK 3 S21: 0.0389 S22: 0.1990 S23: 0.2776 REMARK 3 S31: 0.0018 S32: -0.0993 S33: 0.0047 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 140 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.8439 49.7755 7.4733 REMARK 3 T TENSOR REMARK 3 T11: 0.4997 T22: 0.4862 REMARK 3 T33: 0.9577 T12: -0.0297 REMARK 3 T13: -0.1503 T23: 0.1811 REMARK 3 L TENSOR REMARK 3 L11: 0.2219 L22: 0.0942 REMARK 3 L33: 0.5899 L12: 0.0354 REMARK 3 L13: -0.1329 L23: 0.0500 REMARK 3 S TENSOR REMARK 3 S11: 0.2622 S12: -0.3445 S13: -0.2753 REMARK 3 S21: -0.2606 S22: 0.0942 S23: 0.5956 REMARK 3 S31: 0.1958 S32: -0.0484 S33: 0.0360 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Q3T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013184. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57690 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 45.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 19.00 REMARK 200 R MERGE (I) : 0.16900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1G2I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 TO 3.4M SODIUM MALONATE PH 6.0, REMARK 280 10MM XO4, COUNTER-DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.93500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.78000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.46750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.78000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 100.40250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.78000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.78000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.46750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.78000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.78000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 100.40250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 66.93500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 CYS C 100 CB - CA - C ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 92 6.33 -66.78 REMARK 500 CYS A 100 -116.30 64.95 REMARK 500 CYS B 100 -119.68 67.56 REMARK 500 CYS C 100 -116.60 57.93 REMARK 500 ARG C 149 -61.07 -103.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 6Q3T A 1 166 UNP O59413 DEGLY_PYRHO 1 166 DBREF 6Q3T B 1 166 UNP O59413 DEGLY_PYRHO 1 166 DBREF 6Q3T C 1 166 UNP O59413 DEGLY_PYRHO 1 166 SEQADV 6Q3T ALA A 29 UNP O59413 GLU 29 CONFLICT SEQADV 6Q3T ALA A 60 UNP O59413 GLU 60 CONFLICT SEQADV 6Q3T ALA A 80 UNP O59413 GLU 80 CONFLICT SEQADV 6Q3T ALA B 29 UNP O59413 GLU 29 CONFLICT SEQADV 6Q3T ALA B 60 UNP O59413 GLU 60 CONFLICT SEQADV 6Q3T ALA B 80 UNP O59413 GLU 80 CONFLICT SEQADV 6Q3T ALA C 29 UNP O59413 GLU 29 CONFLICT SEQADV 6Q3T ALA C 60 UNP O59413 GLU 60 CONFLICT SEQADV 6Q3T ALA C 80 UNP O59413 GLU 80 CONFLICT SEQRES 1 A 166 MET LYS VAL LEU PHE LEU THR ALA ASN GLU PHE GLU ASP SEQRES 2 A 166 VAL GLU LEU ILE TYR PRO TYR HIS ARG LEU LYS GLU GLU SEQRES 3 A 166 GLY HIS ALA VAL TYR ILE ALA SER PHE GLU ARG GLY THR SEQRES 4 A 166 ILE THR GLY LYS HIS GLY TYR SER VAL LYS VAL ASP LEU SEQRES 5 A 166 THR PHE ASP LYS VAL ASN PRO ALA GLU PHE ASP ALA LEU SEQRES 6 A 166 VAL LEU PRO GLY GLY ARG ALA PRO GLU ARG VAL ARG LEU SEQRES 7 A 166 ASN ALA LYS ALA VAL SER ILE ALA ARG LYS MET PHE SER SEQRES 8 A 166 GLU GLY LYS PRO VAL ALA SER ILE CYS HIS GLY PRO GLN SEQRES 9 A 166 ILE LEU ILE SER ALA GLY VAL LEU ARG GLY ARG LYS GLY SEQRES 10 A 166 THR SER TYR PRO GLY ILE LYS ASP ASP MET ILE ASN ALA SEQRES 11 A 166 GLY VAL GLU TRP VAL ASP ALA GLU VAL VAL VAL ASP GLY SEQRES 12 A 166 ASN TRP VAL SER SER ARG VAL PRO ALA ASP LEU TYR ALA SEQRES 13 A 166 TRP MET ARG GLU PHE VAL LYS LEU LEU LYS SEQRES 1 B 166 MET LYS VAL LEU PHE LEU THR ALA ASN GLU PHE GLU ASP SEQRES 2 B 166 VAL GLU LEU ILE TYR PRO TYR HIS ARG LEU LYS GLU GLU SEQRES 3 B 166 GLY HIS ALA VAL TYR ILE ALA SER PHE GLU ARG GLY THR SEQRES 4 B 166 ILE THR GLY LYS HIS GLY TYR SER VAL LYS VAL ASP LEU SEQRES 5 B 166 THR PHE ASP LYS VAL ASN PRO ALA GLU PHE ASP ALA LEU SEQRES 6 B 166 VAL LEU PRO GLY GLY ARG ALA PRO GLU ARG VAL ARG LEU SEQRES 7 B 166 ASN ALA LYS ALA VAL SER ILE ALA ARG LYS MET PHE SER SEQRES 8 B 166 GLU GLY LYS PRO VAL ALA SER ILE CYS HIS GLY PRO GLN SEQRES 9 B 166 ILE LEU ILE SER ALA GLY VAL LEU ARG GLY ARG LYS GLY SEQRES 10 B 166 THR SER TYR PRO GLY ILE LYS ASP ASP MET ILE ASN ALA SEQRES 11 B 166 GLY VAL GLU TRP VAL ASP ALA GLU VAL VAL VAL ASP GLY SEQRES 12 B 166 ASN TRP VAL SER SER ARG VAL PRO ALA ASP LEU TYR ALA SEQRES 13 B 166 TRP MET ARG GLU PHE VAL LYS LEU LEU LYS SEQRES 1 C 166 MET LYS VAL LEU PHE LEU THR ALA ASN GLU PHE GLU ASP SEQRES 2 C 166 VAL GLU LEU ILE TYR PRO TYR HIS ARG LEU LYS GLU GLU SEQRES 3 C 166 GLY HIS ALA VAL TYR ILE ALA SER PHE GLU ARG GLY THR SEQRES 4 C 166 ILE THR GLY LYS HIS GLY TYR SER VAL LYS VAL ASP LEU SEQRES 5 C 166 THR PHE ASP LYS VAL ASN PRO ALA GLU PHE ASP ALA LEU SEQRES 6 C 166 VAL LEU PRO GLY GLY ARG ALA PRO GLU ARG VAL ARG LEU SEQRES 7 C 166 ASN ALA LYS ALA VAL SER ILE ALA ARG LYS MET PHE SER SEQRES 8 C 166 GLU GLY LYS PRO VAL ALA SER ILE CYS HIS GLY PRO GLN SEQRES 9 C 166 ILE LEU ILE SER ALA GLY VAL LEU ARG GLY ARG LYS GLY SEQRES 10 C 166 THR SER TYR PRO GLY ILE LYS ASP ASP MET ILE ASN ALA SEQRES 11 C 166 GLY VAL GLU TRP VAL ASP ALA GLU VAL VAL VAL ASP GLY SEQRES 12 C 166 ASN TRP VAL SER SER ARG VAL PRO ALA ASP LEU TYR ALA SEQRES 13 C 166 TRP MET ARG GLU PHE VAL LYS LEU LEU LYS FORMUL 4 HOH *96(H2 O) HELIX 1 AA1 GLU A 12 GLU A 26 1 15 HELIX 2 AA2 ASP A 55 VAL A 57 5 3 HELIX 3 AA3 ASN A 58 PHE A 62 5 5 HELIX 4 AA4 ARG A 71 ARG A 77 1 7 HELIX 5 AA5 ASN A 79 GLU A 92 1 14 HELIX 6 AA6 PRO A 103 GLY A 110 1 8 HELIX 7 AA7 TYR A 120 GLY A 122 5 3 HELIX 8 AA8 ILE A 123 ALA A 130 1 8 HELIX 9 AA9 VAL A 150 ALA A 152 5 3 HELIX 10 AB1 ASP A 153 LEU A 165 1 13 HELIX 11 AB2 GLU B 12 GLU B 26 1 15 HELIX 12 AB3 ASP B 55 VAL B 57 5 3 HELIX 13 AB4 ASN B 58 PHE B 62 5 5 HELIX 14 AB5 ARG B 71 ARG B 77 1 7 HELIX 15 AB6 ASN B 79 GLU B 92 1 14 HELIX 16 AB7 PRO B 103 GLY B 110 1 8 HELIX 17 AB8 TYR B 120 GLY B 122 5 3 HELIX 18 AB9 ILE B 123 ALA B 130 1 8 HELIX 19 AC1 VAL B 150 ALA B 152 5 3 HELIX 20 AC2 ASP B 153 LYS B 166 1 14 HELIX 21 AC3 GLU C 12 GLU C 26 1 15 HELIX 22 AC4 ASN C 58 PHE C 62 5 5 HELIX 23 AC5 ALA C 72 ARG C 77 1 6 HELIX 24 AC6 ASN C 79 GLU C 92 1 14 HELIX 25 AC7 PRO C 103 GLY C 110 1 8 HELIX 26 AC8 TYR C 120 GLY C 122 5 3 HELIX 27 AC9 ILE C 123 ALA C 130 1 8 HELIX 28 AD1 VAL C 150 ALA C 152 5 3 HELIX 29 AD2 ASP C 153 LEU C 164 1 12 SHEET 1 AA1 7 LEU A 52 THR A 53 0 SHEET 2 AA1 7 ALA A 29 SER A 34 1 O ILE A 32 N LEU A 52 SHEET 3 AA1 7 LYS A 2 LEU A 6 1 N PHE A 5 O ALA A 33 SHEET 4 AA1 7 ALA A 64 LEU A 67 1 O VAL A 66 N LEU A 4 SHEET 5 AA1 7 VAL A 96 ILE A 99 1 O ALA A 97 N LEU A 67 SHEET 6 AA1 7 TRP A 145 SER A 148 1 O VAL A 146 N VAL A 96 SHEET 7 AA1 7 VAL A 140 ASP A 142 -1 N VAL A 140 O SER A 147 SHEET 1 AA2 2 GLY A 38 THR A 41 0 SHEET 2 AA2 2 SER A 47 VAL A 50 -1 O VAL A 50 N GLY A 38 SHEET 1 AA3 2 LYS A 116 GLY A 117 0 SHEET 2 AA3 2 GLU A 133 TRP A 134 1 O GLU A 133 N GLY A 117 SHEET 1 AA4 7 LEU B 52 THR B 53 0 SHEET 2 AA4 7 ALA B 29 SER B 34 1 N SER B 34 O LEU B 52 SHEET 3 AA4 7 LYS B 2 LEU B 6 1 N VAL B 3 O ALA B 29 SHEET 4 AA4 7 ALA B 64 LEU B 67 1 O VAL B 66 N LEU B 4 SHEET 5 AA4 7 VAL B 96 ILE B 99 1 O ALA B 97 N LEU B 67 SHEET 6 AA4 7 TRP B 145 SER B 148 1 O VAL B 146 N VAL B 96 SHEET 7 AA4 7 VAL B 140 ASP B 142 -1 N VAL B 140 O SER B 147 SHEET 1 AA5 2 GLY B 38 THR B 41 0 SHEET 2 AA5 2 SER B 47 VAL B 50 -1 O VAL B 50 N GLY B 38 SHEET 1 AA6 2 LYS B 116 GLY B 117 0 SHEET 2 AA6 2 GLU B 133 TRP B 134 1 O GLU B 133 N GLY B 117 SHEET 1 AA7 7 LEU C 52 THR C 53 0 SHEET 2 AA7 7 ALA C 29 SER C 34 1 N ILE C 32 O LEU C 52 SHEET 3 AA7 7 LYS C 2 LEU C 6 1 N VAL C 3 O ALA C 29 SHEET 4 AA7 7 ALA C 64 LEU C 67 1 O VAL C 66 N LEU C 4 SHEET 5 AA7 7 VAL C 96 ILE C 99 1 O ALA C 97 N LEU C 67 SHEET 6 AA7 7 TRP C 145 SER C 148 1 O VAL C 146 N VAL C 96 SHEET 7 AA7 7 VAL C 140 ASP C 142 -1 N VAL C 140 O SER C 147 SHEET 1 AA8 2 GLY C 38 THR C 41 0 SHEET 2 AA8 2 SER C 47 VAL C 50 -1 O VAL C 50 N GLY C 38 SHEET 1 AA9 2 LYS C 116 GLY C 117 0 SHEET 2 AA9 2 GLU C 133 TRP C 134 1 O GLU C 133 N GLY C 117 CRYST1 125.560 125.560 133.870 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007964 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007964 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007470 0.00000