data_6Q40 # _entry.id 6Q40 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6Q40 WWPDB D_1200013222 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Q40 _pdbx_database_status.recvd_initial_deposition_date 2018-12-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mesters, J.R.' 1 0000-0001-8532-6699 'Saleem-Batcha, R.' 2 0000-0003-3361-823X 'Sanchez-Vallet, A.' 3 0000-0002-3668-9503 'Thomma, B.P.H.J.' 4 0000-0003-4125-4181 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'Plos Pathog.' ? ? 1553-7374 ? ? 16 ? e1008652 e1008652 'A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization.' 2020 ? 10.1371/journal.ppat.1008652 32574207 ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? ? ? ? ? ? ? ? 'A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization' 2019 ? 10.1101/787820 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sanchez-Vallet, A.' 1 0000-0002-3668-9503 primary 'Tian, H.' 2 ? primary 'Rodriguez-Moreno, L.' 3 0000-0003-2385-8782 primary 'Valkenburg, D.J.' 4 ? primary 'Saleem-Batcha, R.' 5 0000-0003-3361-823X primary 'Wawra, S.' 6 ? primary 'Kombrink, A.' 7 ? primary 'Verhage, L.' 8 0000-0001-6402-3605 primary 'de Jonge, R.' 9 0000-0001-5065-8538 primary 'van Esse, H.P.' 10 0000-0002-3667-060X primary 'Zuccaro, A.' 11 0000-0002-8026-0114 primary 'Croll, D.' 12 0000-0002-2072-380X primary 'Mesters, J.R.' 13 0000-0001-8532-6699 primary 'Thomma, B.P.H.J.' 14 0000-0003-4125-4181 1 'Sanchez-Vallet, A.' 15 0000-0002-3668-9503 1 'Rodriguez-Moreno, L.' 16 0000-0003-2385-8782 1 'Valkenburg, D.-J.' 17 ? 1 'Saleem-Batcha, R.' 18 0000-0003-3361-823X 1 'Wawra, S.' 19 ? 1 'Croll, D.' 20 ? 1 'Mesters, J.R.' 21 0000-0001-8532-6699 1 'Thomma, B.P.H.J.' 22 0000-0003-4125-4181 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6Q40 _cell.details ? _cell.formula_units_Z ? _cell.length_a 119.390 _cell.length_a_esd ? _cell.length_b 119.390 _cell.length_b_esd ? _cell.length_c 157.670 _cell.length_c_esd ? _cell.volume 1946326.087 _cell.volume_esd ? _cell.Z_PDB 48 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q40 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LysM domain-containing protein' 8651.568 4 ? ? ? ? 2 branched man ;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 627.594 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 4 water nat water 18.015 130 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name triacetyl-beta-chitotriose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ARNPITITPQFDCGATNSQQYVARSGDTLTKIAQEIYHDVVGVCDIARANNLADPNRIDAGTPYTIPINCQTYDRNSCL _entity_poly.pdbx_seq_one_letter_code_can ARNPITITPQFDCGATNSQQYVARSGDTLTKIAQEIYHDVVGVCDIARANNLADPNRIDAGTPYTIPINCQTYDRNSCL _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 ASN n 1 4 PRO n 1 5 ILE n 1 6 THR n 1 7 ILE n 1 8 THR n 1 9 PRO n 1 10 GLN n 1 11 PHE n 1 12 ASP n 1 13 CYS n 1 14 GLY n 1 15 ALA n 1 16 THR n 1 17 ASN n 1 18 SER n 1 19 GLN n 1 20 GLN n 1 21 TYR n 1 22 VAL n 1 23 ALA n 1 24 ARG n 1 25 SER n 1 26 GLY n 1 27 ASP n 1 28 THR n 1 29 LEU n 1 30 THR n 1 31 LYS n 1 32 ILE n 1 33 ALA n 1 34 GLN n 1 35 GLU n 1 36 ILE n 1 37 TYR n 1 38 HIS n 1 39 ASP n 1 40 VAL n 1 41 VAL n 1 42 GLY n 1 43 VAL n 1 44 CYS n 1 45 ASP n 1 46 ILE n 1 47 ALA n 1 48 ARG n 1 49 ALA n 1 50 ASN n 1 51 ASN n 1 52 LEU n 1 53 ALA n 1 54 ASP n 1 55 PRO n 1 56 ASN n 1 57 ARG n 1 58 ILE n 1 59 ASP n 1 60 ALA n 1 61 GLY n 1 62 THR n 1 63 PRO n 1 64 TYR n 1 65 THR n 1 66 ILE n 1 67 PRO n 1 68 ILE n 1 69 ASN n 1 70 CYS n 1 71 GLN n 1 72 THR n 1 73 TYR n 1 74 ASP n 1 75 ARG n 1 76 ASN n 1 77 SER n 1 78 CYS n 1 79 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 79 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MYCGRDRAFT_105487 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Zymoseptoria tritici IPO323' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 336722 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella phaffii GS115' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 644223 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F9XHX3_ZYMTI _struct_ref.pdbx_db_accession F9XHX3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RNPITITPQFDCGATNSQQYVARSGDTLTKIAQEIYHDVVGVCDIARANNLADPNRIDAGTPYTIPINCQTYDRNSCL _struct_ref.pdbx_align_begin 20 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Q40 A 2 ? 79 ? F9XHX3 20 ? 97 ? 2 79 2 1 6Q40 B 2 ? 79 ? F9XHX3 20 ? 97 ? 2 79 3 1 6Q40 C 2 ? 79 ? F9XHX3 20 ? 97 ? 2 79 4 1 6Q40 D 2 ? 79 ? F9XHX3 20 ? 97 ? 2 79 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6Q40 ALA A 1 ? UNP F9XHX3 ? ? 'expression tag' 1 1 2 6Q40 ALA B 1 ? UNP F9XHX3 ? ? 'expression tag' 1 2 3 6Q40 ALA C 1 ? UNP F9XHX3 ? ? 'expression tag' 1 3 4 6Q40 ALA D 1 ? UNP F9XHX3 ? ? 'expression tag' 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Q40 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.69 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 73.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein stock: 20 mM HEPES pH 7.0, and 50 mM NaCl Initial crystals: Reservoir 47.5% dioxan Seeds stock for micro-seeding: 45% dioxan Best conditions: By micro-seeding techniques using 0.1 M sodium citrate pH 5.6, 5%-20% PEG4000 and 5% isopropanol as the reservoir solution. Crystal cryo and soaking buffer: 0.2 M sodium acetate pH 4.6 with 20% ethylene glycol. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-01-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91841 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 43.72 _reflns.entry_id 6Q40 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.412 _reflns.d_resolution_low 39.452 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26300 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.083 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4120 _reflns_shell.d_res_low 2.5086 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2827 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 55.2 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Q40 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.412 _refine.ls_d_res_low 39.452 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25331 _refine.ls_number_reflns_R_free 1219 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.13 _refine.ls_percent_reflns_R_free 5.06 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1815 _refine.ls_R_factor_R_free 0.2203 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1796 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2411 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 130 _refine_hist.number_atoms_total 2587 _refine_hist.d_res_high 2.412 _refine_hist.d_res_low 39.452 # _struct.entry_id 6Q40 _struct.title ;A secreted LysM effector of the wheat pathogen Zymoseptoria tritici protects the fungal hyphae against chitinase hydrolysis through ligand-dependent polymerisation of LysM homodimers ; _struct.pdbx_descriptor 'LysM domain-containing protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Q40 _struct_keywords.text 'Lectin, chitine-binding, oligomerization, protomer, LysM, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 28 ? GLU A 35 ? THR A 28 GLU A 35 1 ? 8 HELX_P HELX_P2 AA2 GLY A 42 ? ASN A 50 ? GLY A 42 ASN A 50 1 ? 9 HELX_P HELX_P3 AA3 THR B 28 ? GLU B 35 ? THR B 28 GLU B 35 1 ? 8 HELX_P HELX_P4 AA4 GLY B 42 ? ASN B 50 ? GLY B 42 ASN B 50 1 ? 9 HELX_P HELX_P5 AA5 THR C 28 ? GLU C 35 ? THR C 28 GLU C 35 1 ? 8 HELX_P HELX_P6 AA6 GLY C 42 ? ASN C 50 ? GLY C 42 ASN C 50 1 ? 9 HELX_P HELX_P7 AA7 THR D 28 ? GLU D 35 ? THR D 28 GLU D 35 1 ? 8 HELX_P HELX_P8 AA8 GLY D 42 ? ASN D 50 ? GLY D 42 ASN D 50 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 70 SG ? ? A CYS 13 A CYS 70 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf2 disulf ? ? A CYS 44 SG ? ? ? 1_555 A CYS 78 SG ? ? A CYS 44 A CYS 78 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf3 disulf ? ? B CYS 13 SG ? ? ? 1_555 B CYS 70 SG ? ? B CYS 13 B CYS 70 1_555 ? ? ? ? ? ? ? 2.063 ? ? disulf4 disulf ? ? B CYS 44 SG ? ? ? 1_555 B CYS 78 SG ? ? B CYS 44 B CYS 78 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf5 disulf ? ? C CYS 13 SG ? ? ? 1_555 C CYS 70 SG ? ? C CYS 13 C CYS 70 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf6 disulf ? ? C CYS 44 SG ? ? ? 1_555 C CYS 78 SG ? ? C CYS 44 C CYS 78 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf7 disulf ? ? D CYS 13 SG ? ? ? 1_555 D CYS 70 SG ? ? D CYS 13 D CYS 70 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf8 disulf ? ? D CYS 44 SG ? ? ? 1_555 D CYS 78 SG ? ? D CYS 44 D CYS 78 1_555 ? ? ? ? ? ? ? 2.044 ? ? covale1 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.418 ? ? covale2 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 2 E NAG 3 1_555 ? ? ? ? ? ? ? 1.421 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 5 ? ILE A 7 ? ILE A 5 ILE A 7 AA1 2 ILE B 5 ? ILE B 7 ? ILE B 5 ILE B 7 AA2 1 SER A 18 ? VAL A 22 ? SER A 18 VAL A 22 AA2 2 PRO A 63 ? PRO A 67 ? PRO A 63 PRO A 67 AA3 1 SER B 18 ? VAL B 22 ? SER B 18 VAL B 22 AA3 2 PRO B 63 ? PRO B 67 ? PRO B 63 PRO B 67 AA4 1 ILE C 5 ? ILE C 7 ? ILE C 5 ILE C 7 AA4 2 ILE D 5 ? ILE D 7 ? ILE D 5 ILE D 7 AA5 1 SER C 18 ? VAL C 22 ? SER C 18 VAL C 22 AA5 2 PRO C 63 ? PRO C 67 ? PRO C 63 PRO C 67 AA6 1 SER D 18 ? VAL D 22 ? SER D 18 VAL D 22 AA6 2 PRO D 63 ? PRO D 67 ? PRO D 63 PRO D 67 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 5 ? N ILE A 5 O ILE B 7 ? O ILE B 7 AA2 1 2 N GLN A 19 ? N GLN A 19 O ILE A 66 ? O ILE A 66 AA3 1 2 N GLN B 19 ? N GLN B 19 O ILE B 66 ? O ILE B 66 AA4 1 2 N ILE C 5 ? N ILE C 5 O ILE D 7 ? O ILE D 7 AA5 1 2 N GLN C 19 ? N GLN C 19 O ILE C 66 ? O ILE C 66 AA6 1 2 N GLN D 19 ? N GLN D 19 O ILE D 66 ? O ILE D 66 # _atom_sites.entry_id 6Q40 _atom_sites.fract_transf_matrix[1][1] 0.008376 _atom_sites.fract_transf_matrix[1][2] 0.004836 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009672 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006342 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 CYS 70 70 70 CYS CYS A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 LEU 79 79 79 LEU LEU A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 GLN 10 10 10 GLN GLN B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 CYS 13 13 13 CYS CYS B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 GLN 20 20 20 GLN GLN B . n B 1 21 TYR 21 21 21 TYR TYR B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 ASP 27 27 27 ASP ASP B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 GLN 34 34 34 GLN GLN B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 TYR 37 37 37 TYR TYR B . n B 1 38 HIS 38 38 38 HIS HIS B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 CYS 44 44 44 CYS CYS B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 ILE 46 46 46 ILE ILE B . n B 1 47 ALA 47 47 47 ALA ALA B . n B 1 48 ARG 48 48 48 ARG ARG B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 ASN 50 50 50 ASN ASN B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 ALA 53 53 53 ALA ALA B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 ASN 56 56 56 ASN ASN B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 THR 62 62 62 THR THR B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 TYR 64 64 64 TYR TYR B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 PRO 67 67 67 PRO PRO B . n B 1 68 ILE 68 68 68 ILE ILE B . n B 1 69 ASN 69 69 69 ASN ASN B . n B 1 70 CYS 70 70 70 CYS CYS B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 THR 72 72 72 THR THR B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 ASP 74 74 74 ASP ASP B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 CYS 78 78 78 CYS CYS B . n B 1 79 LEU 79 79 79 LEU LEU B . n C 1 1 ALA 1 1 1 ALA ALA C . n C 1 2 ARG 2 2 2 ARG ARG C . n C 1 3 ASN 3 3 3 ASN ASN C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 ILE 5 5 5 ILE ILE C . n C 1 6 THR 6 6 6 THR THR C . n C 1 7 ILE 7 7 7 ILE ILE C . n C 1 8 THR 8 8 8 THR THR C . n C 1 9 PRO 9 9 9 PRO PRO C . n C 1 10 GLN 10 10 10 GLN GLN C . n C 1 11 PHE 11 11 11 PHE PHE C . n C 1 12 ASP 12 12 12 ASP ASP C . n C 1 13 CYS 13 13 13 CYS CYS C . n C 1 14 GLY 14 14 14 GLY GLY C . n C 1 15 ALA 15 15 15 ALA ALA C . n C 1 16 THR 16 16 16 THR THR C . n C 1 17 ASN 17 17 17 ASN ASN C . n C 1 18 SER 18 18 18 SER SER C . n C 1 19 GLN 19 19 19 GLN GLN C . n C 1 20 GLN 20 20 20 GLN GLN C . n C 1 21 TYR 21 21 21 TYR TYR C . n C 1 22 VAL 22 22 22 VAL VAL C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 ARG 24 24 24 ARG ARG C . n C 1 25 SER 25 25 25 SER SER C . n C 1 26 GLY 26 26 26 GLY GLY C . n C 1 27 ASP 27 27 27 ASP ASP C . n C 1 28 THR 28 28 28 THR THR C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 THR 30 30 30 THR THR C . n C 1 31 LYS 31 31 31 LYS LYS C . n C 1 32 ILE 32 32 32 ILE ILE C . n C 1 33 ALA 33 33 33 ALA ALA C . n C 1 34 GLN 34 34 34 GLN GLN C . n C 1 35 GLU 35 35 35 GLU GLU C . n C 1 36 ILE 36 36 36 ILE ILE C . n C 1 37 TYR 37 37 37 TYR TYR C . n C 1 38 HIS 38 38 38 HIS HIS C . n C 1 39 ASP 39 39 39 ASP ASP C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 VAL 41 41 41 VAL VAL C . n C 1 42 GLY 42 42 42 GLY GLY C . n C 1 43 VAL 43 43 43 VAL VAL C . n C 1 44 CYS 44 44 44 CYS CYS C . n C 1 45 ASP 45 45 45 ASP ASP C . n C 1 46 ILE 46 46 46 ILE ILE C . n C 1 47 ALA 47 47 47 ALA ALA C . n C 1 48 ARG 48 48 48 ARG ARG C . n C 1 49 ALA 49 49 49 ALA ALA C . n C 1 50 ASN 50 50 50 ASN ASN C . n C 1 51 ASN 51 51 51 ASN ASN C . n C 1 52 LEU 52 52 52 LEU LEU C . n C 1 53 ALA 53 53 53 ALA ALA C . n C 1 54 ASP 54 54 54 ASP ASP C . n C 1 55 PRO 55 55 55 PRO PRO C . n C 1 56 ASN 56 56 56 ASN ASN C . n C 1 57 ARG 57 57 57 ARG ARG C . n C 1 58 ILE 58 58 58 ILE ILE C . n C 1 59 ASP 59 59 59 ASP ASP C . n C 1 60 ALA 60 60 60 ALA ALA C . n C 1 61 GLY 61 61 61 GLY GLY C . n C 1 62 THR 62 62 62 THR THR C . n C 1 63 PRO 63 63 63 PRO PRO C . n C 1 64 TYR 64 64 64 TYR TYR C . n C 1 65 THR 65 65 65 THR THR C . n C 1 66 ILE 66 66 66 ILE ILE C . n C 1 67 PRO 67 67 67 PRO PRO C . n C 1 68 ILE 68 68 68 ILE ILE C . n C 1 69 ASN 69 69 69 ASN ASN C . n C 1 70 CYS 70 70 70 CYS CYS C . n C 1 71 GLN 71 71 71 GLN GLN C . n C 1 72 THR 72 72 72 THR THR C . n C 1 73 TYR 73 73 73 TYR TYR C . n C 1 74 ASP 74 74 74 ASP ASP C . n C 1 75 ARG 75 75 75 ARG ARG C . n C 1 76 ASN 76 76 76 ASN ASN C . n C 1 77 SER 77 77 77 SER SER C . n C 1 78 CYS 78 78 78 CYS CYS C . n C 1 79 LEU 79 79 79 LEU LEU C . n D 1 1 ALA 1 1 ? ? ? D . n D 1 2 ARG 2 2 2 ARG ARG D . n D 1 3 ASN 3 3 3 ASN ASN D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 ILE 5 5 5 ILE ILE D . n D 1 6 THR 6 6 6 THR THR D . n D 1 7 ILE 7 7 7 ILE ILE D . n D 1 8 THR 8 8 8 THR THR D . n D 1 9 PRO 9 9 9 PRO PRO D . n D 1 10 GLN 10 10 10 GLN GLN D . n D 1 11 PHE 11 11 11 PHE PHE D . n D 1 12 ASP 12 12 12 ASP ASP D . n D 1 13 CYS 13 13 13 CYS CYS D . n D 1 14 GLY 14 14 14 GLY GLY D . n D 1 15 ALA 15 15 15 ALA ALA D . n D 1 16 THR 16 16 16 THR THR D . n D 1 17 ASN 17 17 17 ASN ASN D . n D 1 18 SER 18 18 18 SER SER D . n D 1 19 GLN 19 19 19 GLN GLN D . n D 1 20 GLN 20 20 20 GLN GLN D . n D 1 21 TYR 21 21 21 TYR TYR D . n D 1 22 VAL 22 22 22 VAL VAL D . n D 1 23 ALA 23 23 23 ALA ALA D . n D 1 24 ARG 24 24 24 ARG ARG D . n D 1 25 SER 25 25 25 SER SER D . n D 1 26 GLY 26 26 26 GLY GLY D . n D 1 27 ASP 27 27 27 ASP ASP D . n D 1 28 THR 28 28 28 THR THR D . n D 1 29 LEU 29 29 29 LEU LEU D . n D 1 30 THR 30 30 30 THR THR D . n D 1 31 LYS 31 31 31 LYS LYS D . n D 1 32 ILE 32 32 32 ILE ILE D . n D 1 33 ALA 33 33 33 ALA ALA D . n D 1 34 GLN 34 34 34 GLN GLN D . n D 1 35 GLU 35 35 35 GLU GLU D . n D 1 36 ILE 36 36 36 ILE ILE D . n D 1 37 TYR 37 37 37 TYR TYR D . n D 1 38 HIS 38 38 38 HIS HIS D . n D 1 39 ASP 39 39 39 ASP ASP D . n D 1 40 VAL 40 40 40 VAL VAL D . n D 1 41 VAL 41 41 41 VAL VAL D . n D 1 42 GLY 42 42 42 GLY GLY D . n D 1 43 VAL 43 43 43 VAL VAL D . n D 1 44 CYS 44 44 44 CYS CYS D . n D 1 45 ASP 45 45 45 ASP ASP D . n D 1 46 ILE 46 46 46 ILE ILE D . n D 1 47 ALA 47 47 47 ALA ALA D . n D 1 48 ARG 48 48 48 ARG ARG D . n D 1 49 ALA 49 49 49 ALA ALA D . n D 1 50 ASN 50 50 50 ASN ASN D . n D 1 51 ASN 51 51 51 ASN ASN D . n D 1 52 LEU 52 52 52 LEU LEU D . n D 1 53 ALA 53 53 53 ALA ALA D . n D 1 54 ASP 54 54 54 ASP ASP D . n D 1 55 PRO 55 55 55 PRO PRO D . n D 1 56 ASN 56 56 56 ASN ASN D . n D 1 57 ARG 57 57 57 ARG ARG D . n D 1 58 ILE 58 58 58 ILE ILE D . n D 1 59 ASP 59 59 59 ASP ASP D . n D 1 60 ALA 60 60 60 ALA ALA D . n D 1 61 GLY 61 61 61 GLY GLY D . n D 1 62 THR 62 62 62 THR THR D . n D 1 63 PRO 63 63 63 PRO PRO D . n D 1 64 TYR 64 64 64 TYR TYR D . n D 1 65 THR 65 65 65 THR THR D . n D 1 66 ILE 66 66 66 ILE ILE D . n D 1 67 PRO 67 67 67 PRO PRO D . n D 1 68 ILE 68 68 68 ILE ILE D . n D 1 69 ASN 69 69 69 ASN ASN D . n D 1 70 CYS 70 70 70 CYS CYS D . n D 1 71 GLN 71 71 71 GLN GLN D . n D 1 72 THR 72 72 72 THR THR D . n D 1 73 TYR 73 73 73 TYR TYR D . n D 1 74 ASP 74 74 74 ASP ASP D . n D 1 75 ARG 75 75 75 ARG ARG D . n D 1 76 ASN 76 76 76 ASN ASN D . n D 1 77 SER 77 77 77 SER SER D . n D 1 78 CYS 78 78 78 CYS CYS D . n D 1 79 LEU 79 79 79 LEU LEU D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 CL 1 101 3 CL CL A . G 3 CL 1 104 1 CL CL B . H 3 CL 1 101 2 CL CL C . I 4 HOH 1 201 105 HOH HOH A . I 4 HOH 2 202 90 HOH HOH A . I 4 HOH 3 203 134 HOH HOH A . I 4 HOH 4 204 6 HOH HOH A . I 4 HOH 5 205 122 HOH HOH A . I 4 HOH 6 206 129 HOH HOH A . I 4 HOH 7 207 146 HOH HOH A . I 4 HOH 8 208 82 HOH HOH A . I 4 HOH 9 209 38 HOH HOH A . I 4 HOH 10 210 22 HOH HOH A . I 4 HOH 11 211 36 HOH HOH A . I 4 HOH 12 212 4 HOH HOH A . I 4 HOH 13 213 61 HOH HOH A . I 4 HOH 14 214 96 HOH HOH A . I 4 HOH 15 215 8 HOH HOH A . I 4 HOH 16 216 21 HOH HOH A . I 4 HOH 17 217 67 HOH HOH A . I 4 HOH 18 218 25 HOH HOH A . I 4 HOH 19 219 27 HOH HOH A . I 4 HOH 20 220 87 HOH HOH A . I 4 HOH 21 221 10 HOH HOH A . I 4 HOH 22 222 147 HOH HOH A . I 4 HOH 23 223 133 HOH HOH A . I 4 HOH 24 224 5 HOH HOH A . I 4 HOH 25 225 33 HOH HOH A . I 4 HOH 26 226 130 HOH HOH A . I 4 HOH 27 227 60 HOH HOH A . I 4 HOH 28 228 136 HOH HOH A . I 4 HOH 29 229 73 HOH HOH A . I 4 HOH 30 230 98 HOH HOH A . I 4 HOH 31 231 88 HOH HOH A . I 4 HOH 32 232 150 HOH HOH A . I 4 HOH 33 233 3 HOH HOH A . I 4 HOH 34 234 35 HOH HOH A . I 4 HOH 35 235 13 HOH HOH A . I 4 HOH 36 236 95 HOH HOH A . I 4 HOH 37 237 114 HOH HOH A . I 4 HOH 38 238 48 HOH HOH A . I 4 HOH 39 239 80 HOH HOH A . I 4 HOH 40 240 113 HOH HOH A . I 4 HOH 41 241 135 HOH HOH A . I 4 HOH 42 242 127 HOH HOH A . I 4 HOH 43 243 81 HOH HOH A . I 4 HOH 44 244 132 HOH HOH A . I 4 HOH 45 245 148 HOH HOH A . I 4 HOH 46 246 149 HOH HOH A . I 4 HOH 47 247 100 HOH HOH A . I 4 HOH 48 248 16 HOH HOH A . I 4 HOH 49 249 17 HOH HOH A . I 4 HOH 50 250 128 HOH HOH A . I 4 HOH 51 251 39 HOH HOH A . I 4 HOH 52 252 42 HOH HOH A . I 4 HOH 53 253 29 HOH HOH A . I 4 HOH 54 254 119 HOH HOH A . J 4 HOH 1 201 92 HOH HOH B . J 4 HOH 2 202 24 HOH HOH B . J 4 HOH 3 203 56 HOH HOH B . J 4 HOH 4 204 145 HOH HOH B . J 4 HOH 5 205 141 HOH HOH B . J 4 HOH 6 206 57 HOH HOH B . J 4 HOH 7 207 31 HOH HOH B . J 4 HOH 8 208 2 HOH HOH B . J 4 HOH 9 209 18 HOH HOH B . J 4 HOH 10 210 20 HOH HOH B . J 4 HOH 11 211 94 HOH HOH B . J 4 HOH 12 212 55 HOH HOH B . J 4 HOH 13 213 139 HOH HOH B . J 4 HOH 14 214 32 HOH HOH B . J 4 HOH 15 215 1 HOH HOH B . J 4 HOH 16 216 26 HOH HOH B . J 4 HOH 17 217 69 HOH HOH B . J 4 HOH 18 218 45 HOH HOH B . J 4 HOH 19 219 62 HOH HOH B . J 4 HOH 20 220 86 HOH HOH B . J 4 HOH 21 221 121 HOH HOH B . J 4 HOH 22 222 131 HOH HOH B . J 4 HOH 23 223 44 HOH HOH B . J 4 HOH 24 224 75 HOH HOH B . J 4 HOH 25 225 137 HOH HOH B . J 4 HOH 26 226 52 HOH HOH B . J 4 HOH 27 227 140 HOH HOH B . J 4 HOH 28 228 49 HOH HOH B . J 4 HOH 29 229 46 HOH HOH B . J 4 HOH 30 230 58 HOH HOH B . J 4 HOH 31 231 43 HOH HOH B . J 4 HOH 32 232 59 HOH HOH B . K 4 HOH 1 201 103 HOH HOH C . K 4 HOH 2 202 84 HOH HOH C . K 4 HOH 3 203 93 HOH HOH C . K 4 HOH 4 204 91 HOH HOH C . K 4 HOH 5 205 7 HOH HOH C . K 4 HOH 6 206 143 HOH HOH C . K 4 HOH 7 207 142 HOH HOH C . K 4 HOH 8 208 124 HOH HOH C . K 4 HOH 9 209 112 HOH HOH C . K 4 HOH 10 210 41 HOH HOH C . K 4 HOH 11 211 28 HOH HOH C . K 4 HOH 12 212 70 HOH HOH C . K 4 HOH 13 213 153 HOH HOH C . K 4 HOH 14 214 83 HOH HOH C . K 4 HOH 15 215 51 HOH HOH C . K 4 HOH 16 216 110 HOH HOH C . K 4 HOH 17 217 97 HOH HOH C . K 4 HOH 18 218 34 HOH HOH C . K 4 HOH 19 219 53 HOH HOH C . K 4 HOH 20 220 47 HOH HOH C . K 4 HOH 21 221 152 HOH HOH C . L 4 HOH 1 101 71 HOH HOH D . L 4 HOH 2 102 9 HOH HOH D . L 4 HOH 3 103 74 HOH HOH D . L 4 HOH 4 104 68 HOH HOH D . L 4 HOH 5 105 23 HOH HOH D . L 4 HOH 6 106 65 HOH HOH D . L 4 HOH 7 107 63 HOH HOH D . L 4 HOH 8 108 12 HOH HOH D . L 4 HOH 9 109 19 HOH HOH D . L 4 HOH 10 110 40 HOH HOH D . L 4 HOH 11 111 37 HOH HOH D . L 4 HOH 12 112 50 HOH HOH D . L 4 HOH 13 113 126 HOH HOH D . L 4 HOH 14 114 85 HOH HOH D . L 4 HOH 15 115 66 HOH HOH D . L 4 HOH 16 116 15 HOH HOH D . L 4 HOH 17 117 151 HOH HOH D . L 4 HOH 18 118 138 HOH HOH D . L 4 HOH 19 119 101 HOH HOH D . L 4 HOH 20 120 72 HOH HOH D . L 4 HOH 21 121 107 HOH HOH D . L 4 HOH 22 122 109 HOH HOH D . L 4 HOH 23 123 144 HOH HOH D . # _pdbx_molecule_features.prd_id PRD_900017 _pdbx_molecule_features.name triacetyl-beta-chitotriose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900017 _pdbx_molecule.asym_id E # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,I,J 2 1 C,D,H,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2630 ? 1 MORE -29 ? 1 'SSA (A^2)' 8240 ? 2 'ABSA (A^2)' 2750 ? 2 MORE -14 ? 2 'SSA (A^2)' 9080 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 220 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-10-16 2 'Structure model' 1 1 2020-07-01 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' citation 3 2 'Structure model' citation_author 4 3 'Structure model' atom_site 5 3 'Structure model' chem_comp 6 3 'Structure model' entity 7 3 'Structure model' entity_name_com 8 3 'Structure model' pdbx_branch_scheme 9 3 'Structure model' pdbx_chem_comp_identifier 10 3 'Structure model' pdbx_entity_branch 11 3 'Structure model' pdbx_entity_branch_descriptor 12 3 'Structure model' pdbx_entity_branch_link 13 3 'Structure model' pdbx_entity_branch_list 14 3 'Structure model' pdbx_entity_nonpoly 15 3 'Structure model' pdbx_molecule_features 16 3 'Structure model' pdbx_nonpoly_scheme 17 3 'Structure model' pdbx_struct_assembly_gen 18 3 'Structure model' pdbx_struct_special_symmetry 19 3 'Structure model' struct_asym 20 3 'Structure model' struct_conn 21 3 'Structure model' struct_site 22 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.type' 2 3 'Structure model' '_atom_site.B_iso_or_equiv' 3 3 'Structure model' '_atom_site.Cartn_x' 4 3 'Structure model' '_atom_site.Cartn_y' 5 3 'Structure model' '_atom_site.Cartn_z' 6 3 'Structure model' '_atom_site.auth_asym_id' 7 3 'Structure model' '_atom_site.auth_atom_id' 8 3 'Structure model' '_atom_site.auth_comp_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_chem_comp.name' 16 3 'Structure model' '_entity.formula_weight' 17 3 'Structure model' '_entity.pdbx_description' 18 3 'Structure model' '_entity.pdbx_number_of_molecules' 19 3 'Structure model' '_entity.src_method' 20 3 'Structure model' '_entity.type' 21 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 D ASP 12 ? ? NH1 D ARG 48 ? ? 1.98 2 1 CG D ASP 12 ? ? NH1 D ARG 48 ? ? 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 48 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 48 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 48 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 127.11 _pdbx_validate_rmsd_angle.angle_target_value 113.40 _pdbx_validate_rmsd_angle.angle_deviation 13.71 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 35 ? ? -99.76 -61.32 2 1 ASN A 76 ? ? -158.20 0.54 3 1 GLU B 35 ? ? -100.27 -60.11 4 1 ASN B 76 ? ? -156.65 0.83 5 1 GLU C 35 ? ? -100.55 -61.95 6 1 ASN C 76 ? ? -155.95 1.06 7 1 ASN D 69 ? ? -141.31 48.39 8 1 ASN D 76 ? ? -156.14 -4.80 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id D _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id D _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # _pdbx_audit_support.funding_organization 'Netherlands Organisation for Scientific Research' _pdbx_audit_support.country Netherlands _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 2 NAG 1 E NAG 1 E NAG 364 n E 2 NAG 2 E NAG 2 E NAG 365 n E 2 NAG 3 E NAG 3 E NAG 366 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,3,2/[a2122h-1b_1-5_2*NCC/3=O]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 NAG C1 O1 2 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 NAG 3 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system hexagonal _space_group.name_H-M_alt 'P 61 2 2' _space_group.IT_number 178 _space_group.name_Hall 'P 61 2 (x,y,z+5/12)' _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+1/6 3 y,-x+y,z+5/6 4 -y,x-y,z+1/3 5 -x+y,-x,z+2/3 6 x-y,-y,-z 7 -x,-x+y,-z+2/3 8 -x,-y,z+1/2 9 y,x,-z+1/3 10 -y,-x,-z+5/6 11 -x+y,y,-z+1/2 12 x,x-y,-z+1/6 #