HEADER TOXIN 10-DEC-18 6Q5Z TITLE H-VC7.2, H-SUPERFAMILY CONOTOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONOTOXIN VC7.2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H_VC7.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CONUS VICTORIAE; SOURCE 3 ORGANISM_COMMON: QUEEN VICTORIA CONE; SOURCE 4 ORGANISM_TAXID: 319920; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CYSTEINE RICH, CYSTEINE FRAMEWORK VI/VII, MINI-GRANULIN FOLD, TOXIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.D.NIELSEN,M.M.FOGED,K.TEILUM,L.ELLGAARD REVDAT 5 14-JUN-23 6Q5Z 1 REMARK REVDAT 4 12-JUN-19 6Q5Z 1 JRNL REVDAT 3 08-MAY-19 6Q5Z 1 REMARK REVDAT 2 24-APR-19 6Q5Z 1 JRNL REVDAT 1 17-APR-19 6Q5Z 0 JRNL AUTH L.D.NIELSEN,M.M.FOGED,A.ALBERT,A.B.BERTELSEN,C.L.SOLTOFT, JRNL AUTH 2 S.D.ROBINSON,S.V.PETERSEN,A.W.PURCELL,B.M.OLIVERA, JRNL AUTH 3 R.S.NORTON,T.VASSKOG,H.SAFAVI-HEMAMI,K.TEILUM,L.ELLGAARD JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF AN H-SUPERFAMILY JRNL TITL 2 CONOTOXIN REVEALS A GRANULIN FOLD ARISING FROM A COMMON ICK JRNL TITL 3 CYSTEINE FRAMEWORK. JRNL REF J.BIOL.CHEM. V. 294 8745 2019 JRNL REFN ESSN 1083-351X JRNL PMID 30975904 JRNL DOI 10.1074/JBC.RA119.007491 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Q5Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200010815. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.1 REMARK 210 IONIC STRENGTH : 25 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM H-VC7.2, 90% H2O/10% D2O; 1 REMARK 210 MM [U-13C; U-15N] H-VC7.2, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D HNCO; 3D HN(CA)CO; REMARK 210 3D CBCA(CO)NH; 2D 1H-1H NOESY; REMARK 210 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 25 75.00 -111.33 REMARK 500 1 ILE A 26 149.33 169.64 REMARK 500 2 ILE A 26 127.52 169.79 REMARK 500 3 GLU A 25 74.99 -119.42 REMARK 500 3 ILE A 26 142.54 171.42 REMARK 500 4 ILE A 26 140.33 169.75 REMARK 500 5 ILE A 26 141.71 171.25 REMARK 500 6 PHE A 15 131.17 -173.04 REMARK 500 6 ILE A 26 127.71 171.54 REMARK 500 7 ILE A 26 155.26 85.08 REMARK 500 8 ILE A 26 139.86 171.47 REMARK 500 9 GLU A 25 74.93 -118.21 REMARK 500 9 ILE A 26 138.29 177.03 REMARK 500 10 PHE A 15 134.29 -173.25 REMARK 500 10 ILE A 26 132.36 169.01 REMARK 500 11 PHE A 15 131.40 -172.67 REMARK 500 11 ILE A 26 139.24 170.81 REMARK 500 12 PHE A 15 131.92 -170.23 REMARK 500 12 ILE A 26 140.84 171.24 REMARK 500 13 GLU A 25 75.05 -110.86 REMARK 500 13 ILE A 26 148.78 169.89 REMARK 500 14 PHE A 15 100.48 -170.94 REMARK 500 14 ILE A 26 140.15 178.85 REMARK 500 14 ASP A 27 25.76 48.86 REMARK 500 15 ILE A 26 140.09 173.27 REMARK 500 16 PHE A 15 132.89 -173.03 REMARK 500 16 GLU A 25 75.17 -111.86 REMARK 500 16 ILE A 26 148.18 169.44 REMARK 500 17 GLU A 25 75.15 -112.41 REMARK 500 17 ILE A 26 147.01 171.09 REMARK 500 17 ASP A 27 18.48 59.17 REMARK 500 18 GLU A 25 75.06 -109.82 REMARK 500 18 ILE A 26 148.32 170.12 REMARK 500 19 PHE A 15 125.53 -172.85 REMARK 500 19 GLU A 25 74.84 -112.66 REMARK 500 19 ILE A 26 148.94 169.26 REMARK 500 20 PHE A 15 133.22 -173.86 REMARK 500 20 ILE A 26 140.93 171.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34335 RELATED DB: BMRB REMARK 900 H-VC7.2, H-SUPERFAMILY CONOTOXIN DBREF 6Q5Z A 5 29 UNP W4VS16 H72_CONVC 50 74 SEQADV 6Q5Z GLY A 1 UNP W4VS16 EXPRESSION TAG SEQADV 6Q5Z ALA A 2 UNP W4VS16 EXPRESSION TAG SEQADV 6Q5Z MET A 3 UNP W4VS16 EXPRESSION TAG SEQADV 6Q5Z GLY A 4 UNP W4VS16 EXPRESSION TAG SEQRES 1 A 29 GLY ALA MET GLY ASN VAL ASN CYS GLY GLY VAL PRO CYS SEQRES 2 A 29 LYS PHE GLY CYS CYS ARG GLU ASP ARG CYS ARG GLU ILE SEQRES 3 A 29 ASP CYS ASP SHEET 1 AA1 2 CYS A 17 ARG A 19 0 SHEET 2 AA1 2 ARG A 22 ARG A 24 -1 O ARG A 22 N ARG A 19 SSBOND 1 CYS A 8 CYS A 18 1555 1555 2.02 SSBOND 2 CYS A 13 CYS A 23 1555 1555 2.02 SSBOND 3 CYS A 17 CYS A 28 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1