HEADER HYDROLASE 10-DEC-18 6Q64 TITLE BT1044SEMET E190Q COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLYCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLYCOSIDE HYDROLASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BJP75_026240, BSIG_0571, BTHETA7330_02659, ERS852430_00349, SOURCE 5 ERS852511_00641, HMPREF2534_00734; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE FAMILY 18, COMPLEX N-GLYCANS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BASLE,N.PATERSON,L.CROUCH,D.BOLAM REVDAT 3 04-SEP-19 6Q64 1 JRNL REVDAT 2 12-JUN-19 6Q64 1 JRNL REVDAT 1 08-MAY-19 6Q64 0 JRNL AUTH J.BRILIUTE,P.A.URBANOWICZ,A.S.LUIS,A.BASLE,N.PATERSON, JRNL AUTH 2 O.REBELLO,J.HENDEL,D.A.NDEH,E.C.LOWE,E.C.MARTENS, JRNL AUTH 3 D.I.R.SPENCER,D.N.BOLAM,L.I.CROUCH JRNL TITL COMPLEX N-GLYCAN BREAKDOWN BY GUT BACTEROIDES INVOLVES AN JRNL TITL 2 EXTENSIVE ENZYMATIC APPARATUS ENCODED BY MULTIPLE JRNL TITL 3 CO-REGULATED GENETIC LOCI. JRNL REF NAT MICROBIOL V. 4 1571 2019 JRNL REFN ESSN 2058-5276 JRNL PMID 31160824 JRNL DOI 10.1038/S41564-019-0466-X REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1318 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1883 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.4260 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.4200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2633 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.74000 REMARK 3 B22 (A**2) : 2.74000 REMARK 3 B33 (A**2) : -8.89000 REMARK 3 B12 (A**2) : 1.37000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.249 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.885 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2705 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2401 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3670 ; 1.946 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5598 ; 1.353 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 325 ; 9.107 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;39.581 ;23.655 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 430 ;19.888 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.936 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 336 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3039 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 578 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1303 ; 3.517 ; 5.953 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1302 ; 3.519 ; 5.951 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1627 ; 5.176 ; 8.936 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1628 ; 5.174 ; 8.939 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1402 ; 3.623 ; 6.315 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1400 ; 3.620 ; 6.309 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2043 ; 5.500 ; 9.340 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3088 ; 7.542 ;68.972 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3086 ; 7.543 ;68.899 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 364 REMARK 3 ORIGIN FOR THE GROUP (A): 46.0134 50.4194 23.5000 REMARK 3 T TENSOR REMARK 3 T11: 0.1817 T22: 0.2559 REMARK 3 T33: 0.1000 T12: 0.1532 REMARK 3 T13: 0.0143 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 1.6114 L22: 1.3309 REMARK 3 L33: 4.2027 L12: -0.3133 REMARK 3 L13: 1.0686 L23: -0.3485 REMARK 3 S TENSOR REMARK 3 S11: -0.1820 S12: -0.2504 S13: 0.2635 REMARK 3 S21: 0.2322 S22: 0.0312 S23: 0.2172 REMARK 3 S31: -0.4546 S32: -0.8204 S33: 0.1508 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6Q64 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013149. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9163 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27124 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM NAF, BIS-TRIS PROPANE PH 6.5, REMARK 280 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.39600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.69800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.69800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.39600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 TYR A 6 REMARK 465 LEU A 7 REMARK 465 CYS A 8 REMARK 465 ILE A 9 REMARK 465 GLY A 10 REMARK 465 ILE A 11 REMARK 465 SER A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 SER A 15 REMARK 465 ILE A 16 REMARK 465 LEU A 17 REMARK 465 SER A 18 REMARK 465 CYS A 19 REMARK 465 SER A 20 REMARK 465 ASP A 21 REMARK 465 TRP A 22 REMARK 465 THR A 23 REMARK 465 SER A 24 REMARK 465 GLU A 25 REMARK 465 GLU A 26 REMARK 465 ARG A 27 REMARK 465 GLU A 28 REMARK 465 VAL A 29 REMARK 465 PHE A 30 REMARK 465 GLU A 31 REMARK 465 ASN A 32 REMARK 465 GLN A 33 REMARK 465 GLU A 34 REMARK 465 GLY A 35 REMARK 465 MSE A 36 REMARK 465 HIS A 37 REMARK 465 ARG A 38 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 55 CG - SE - CE ANGL. DEV. = -16.3 DEGREES REMARK 500 MSE A 93 CG - SE - CE ANGL. DEV. = 15.6 DEGREES REMARK 500 MSE A 213 CG - SE - CE ANGL. DEV. = -14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 85 -59.27 90.20 REMARK 500 ARG A 107 -65.41 -125.42 REMARK 500 TRP A 133 155.11 171.32 REMARK 500 GLN A 136 -70.49 -135.49 REMARK 500 LYS A 145 -138.13 67.80 REMARK 500 VAL A 154 -70.76 -87.06 REMARK 500 LYS A 157 -46.08 -133.72 REMARK 500 GLN A 159 54.56 -151.57 REMARK 500 GLN A 190 59.24 -143.18 REMARK 500 HIS A 195 57.96 -103.09 REMARK 500 LEU A 199 -53.22 -131.30 REMARK 500 ALA A 255 47.43 -88.20 REMARK 500 ILE A 327 153.88 -45.04 REMARK 500 PRO A 340 -3.30 -58.90 REMARK 500 GLN A 357 -52.38 -128.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 145 GLY A 146 141.68 REMARK 500 GLY A 192 TYR A 193 142.04 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6Q64 A 1 364 UNP A0A0P0FQI4_BACT4 DBREF2 6Q64 A A0A0P0FQI4 1 364 SEQADV 6Q64 GLN A 190 UNP A0A0P0FQI GLU 190 ENGINEERED MUTATION SEQRES 1 A 364 MSE LYS LEU LEU LYS TYR LEU CYS ILE GLY ILE SER ALA SEQRES 2 A 364 LEU SER ILE LEU SER CYS SER ASP TRP THR SER GLU GLU SEQRES 3 A 364 ARG GLU VAL PHE GLU ASN GLN GLU GLY MSE HIS ARG LEU SEQRES 4 A 364 ILE PRO LEU ILE GLU ALA GLN THR GLU GLU ASP LEU THR SEQRES 5 A 364 PRO THR MSE ARG GLU TYR PHE ALA GLN ILE ARG GLU TYR SEQRES 6 A 364 ARG LYS THR PRO HIS VAL LYS GLY PHE GLY TRP PHE GLY SEQRES 7 A 364 ASN TRP THR GLY LYS GLY ASN ASN ALA GLN ASN TYR LEU SEQRES 8 A 364 LYS MSE LEU PRO ASP SER VAL ASP PHE VAL SER LEU TRP SEQRES 9 A 364 GLY THR ARG GLY TYR LEU SER ASP GLU GLN LYS ALA ASP SEQRES 10 A 364 LEU LYS PHE PHE GLN GLU VAL LYS GLY GLY LYS ALA LEU SEQRES 11 A 364 LEU CYS TRP ILE ILE GLN ASP LEU GLY ASP GLN LEU THR SEQRES 12 A 364 PRO LYS GLY LEU ASN ALA THR GLN TYR TRP VAL GLU GLU SEQRES 13 A 364 LYS GLY GLN GLY ASN PHE ILE GLU GLY VAL LYS ALA TYR SEQRES 14 A 364 ALA ASN ALA ILE CYS ASP SER ILE GLU LYS TYR ASN LEU SEQRES 15 A 364 ASP GLY PHE ASP ILE ASP TYR GLN PRO GLY TYR GLY HIS SEQRES 16 A 364 SER GLY THR LEU ALA ASN TYR GLN THR ILE SER PRO SER SEQRES 17 A 364 GLY ASN ASN LYS MSE GLN VAL PHE ILE GLU THR LEU SER SEQRES 18 A 364 ALA ARG LEU ARG PRO ALA GLY ARG MSE LEU VAL MSE ASP SEQRES 19 A 364 GLY GLN PRO ASP LEU LEU SER THR GLU THR SER LYS LEU SEQRES 20 A 364 VAL ASP HIS TYR ILE TYR GLN ALA TYR TRP GLU SER SER SEQRES 21 A 364 THR SER SER VAL ILE TYR LYS ILE ASN LYS PRO ASN LEU SEQRES 22 A 364 ASP ASP TRP GLU ARG LYS THR ILE ILE THR VAL GLU PHE SEQRES 23 A 364 GLU GLN GLY TRP LYS THR GLY GLY ILE THR TYR TYR THR SEQRES 24 A 364 SER VAL ARG PRO GLU LEU ASN SER MSE GLU GLY ASN GLN SEQRES 25 A 364 ILE LEU ASP TYR ALA THR LEU ASP LEU PRO SER GLY LYS SEQRES 26 A 364 ARG ILE GLY GLY ILE GLY THR TYR HIS MSE GLU TYR ASP SEQRES 27 A 364 TYR PRO ASN ASP PRO PRO TYR LYS TRP LEU ARG LYS ALA SEQRES 28 A 364 LEU TYR PHE GLY ASN GLN VAL TYR PRO GLY LYS PHE ASP MODRES 6Q64 MSE A 55 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 93 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 213 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 230 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 233 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 308 MET MODIFIED RESIDUE MODRES 6Q64 MSE A 335 MET MODIFIED RESIDUE HET MSE A 55 8 HET MSE A 93 8 HET MSE A 213 8 HET MSE A 230 8 HET MSE A 233 8 HET MSE A 308 8 HET MSE A 335 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) HELIX 1 AA1 PRO A 41 ALA A 45 5 5 HELIX 2 AA2 THR A 47 LEU A 51 5 5 HELIX 3 AA3 THR A 52 ARG A 66 1 15 HELIX 4 AA4 ASN A 86 LEU A 94 5 9 HELIX 5 AA5 SER A 111 VAL A 124 1 14 HELIX 6 AA6 ASN A 148 VAL A 154 1 7 HELIX 7 AA7 ASN A 161 TYR A 180 1 20 HELIX 8 AA8 ASN A 210 ARG A 225 1 16 HELIX 9 AA9 PRO A 237 LEU A 240 5 4 HELIX 10 AB1 SER A 241 LYS A 246 1 6 HELIX 11 AB2 SER A 260 ASN A 269 1 10 HELIX 12 AB3 ASP A 275 LYS A 279 1 5 HELIX 13 AB4 PHE A 286 TRP A 290 1 5 HELIX 14 AB5 ARG A 302 MSE A 308 5 7 HELIX 15 AB6 GLY A 310 THR A 318 1 9 HELIX 16 AB7 MSE A 335 TYR A 339 5 5 HELIX 17 AB8 TYR A 345 GLN A 357 1 13 SHEET 1 AA1 9 LYS A 72 TRP A 76 0 SHEET 2 AA1 9 PHE A 100 SER A 102 1 O SER A 102 N GLY A 75 SHEET 3 AA1 9 LYS A 128 ILE A 135 1 O LEU A 130 N VAL A 101 SHEET 4 AA1 9 GLY A 184 TYR A 189 1 O ASP A 188 N ILE A 135 SHEET 5 AA1 9 MSE A 230 GLY A 235 1 O ASP A 234 N ILE A 187 SHEET 6 AA1 9 TYR A 251 GLN A 254 1 O ILE A 252 N MSE A 233 SHEET 7 AA1 9 THR A 280 GLU A 285 1 O ILE A 281 N TYR A 251 SHEET 8 AA1 9 GLY A 329 TYR A 333 1 O TYR A 333 N VAL A 284 SHEET 9 AA1 9 LYS A 72 TRP A 76 1 N TRP A 76 O THR A 332 LINK C THR A 54 N MSE A 55 1555 1555 1.35 LINK C MSE A 55 N ARG A 56 1555 1555 1.33 LINK C LYS A 92 N MSE A 93 1555 1555 1.35 LINK C MSE A 93 N LEU A 94 1555 1555 1.33 LINK C LYS A 212 N MSE A 213 1555 1555 1.34 LINK C MSE A 213 N GLN A 214 1555 1555 1.33 LINK C ARG A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N LEU A 231 1555 1555 1.34 LINK C VAL A 232 N MSE A 233 1555 1555 1.33 LINK C MSE A 233 N ASP A 234 1555 1555 1.33 LINK C SER A 307 N MSE A 308 1555 1555 1.35 LINK C MSE A 308 N GLU A 309 1555 1555 1.33 LINK C HIS A 334 N MSE A 335 1555 1555 1.34 LINK C MSE A 335 N GLU A 336 1555 1555 1.34 CISPEP 1 ASP A 342 PRO A 343 0 -6.00 CRYST1 119.584 119.584 83.094 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008362 0.004828 0.000000 0.00000 SCALE2 0.000000 0.009656 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012035 0.00000