HEADER LYASE 18-DEC-18 6Q9T TITLE PROTEIN-AROMATIC FOLDAMER COMPLEX CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II,CARBONIC ANHYDRASE C,CAC,CARBONIC COMPND 5 ANHYDRASE II,CA-II; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PROTEIN-FOLDAMER COMPLEX, PROTEIN-FOLDAMER INTERACTIONS, MODIFIED KEYWDS 2 INHIBITOR, ANCHORED FOLDAMER, QUINOLINE OLIGOAMIDE FOLDAMER, BENZENE KEYWDS 3 SULFONAMIDE MODIFIED INHIBITOR, LYASE-LYASE INHIBITOR COMPLEX, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.POST,B.LANGLOIS D'ESTAINTOT,L.FISCHER,T.GRANIER,I.HUC REVDAT 3 24-JAN-24 6Q9T 1 REMARK REVDAT 2 15-NOV-23 6Q9T 1 LINK ATOM REVDAT 1 18-SEP-19 6Q9T 0 JRNL AUTH P.S.REDDY,B.LANGLOIS D'ESTAINTOT,T.GRANIER,C.D.MACKERETH, JRNL AUTH 2 L.FISCHER,I.HUC JRNL TITL STRUCTURE ELUCIDATION OF HELICAL AROMATIC FOLDAMER-PROTEIN JRNL TITL 2 COMPLEXES WITH LARGE CONTACT SURFACE AREAS. JRNL REF CHEMISTRY V. 25 11042 2019 JRNL REFN ISSN 0947-6539 JRNL PMID 31257622 JRNL DOI 10.1002/CHEM.201902942 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 8189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 431 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 485 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.5450 REMARK 3 BIN FREE R VALUE SET COUNT : 25 REMARK 3 BIN FREE R VALUE : 0.7250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1778 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 225 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.59000 REMARK 3 B22 (A**2) : -7.11000 REMARK 3 B33 (A**2) : 11.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 2.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.353 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.400 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 46.885 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2080 ; 0.013 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 1721 ; 0.008 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2858 ; 2.009 ; 1.784 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3953 ; 1.551 ; 1.697 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 235 ; 9.292 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;34.409 ;23.171 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 253 ;18.245 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;19.909 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 240 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2447 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 456 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 971 ; 2.631 ; 5.164 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 945 ; 2.653 ; 5.207 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1192 ; 4.421 ; 7.774 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1180 ; 4.434 ; 7.804 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1105 ; 2.293 ; 4.899 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1106 ; 2.292 ; 4.898 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1666 ; 3.756 ; 7.282 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2546 ; 6.087 ;54.629 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2547 ; 6.086 ;54.618 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6470 93.7520 -32.1530 REMARK 3 T TENSOR REMARK 3 T11: 0.4049 T22: 0.2932 REMARK 3 T33: 0.0118 T12: 0.0067 REMARK 3 T13: 0.0054 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.2127 L22: 3.9027 REMARK 3 L33: 0.1756 L12: -0.3980 REMARK 3 L13: 0.2305 L23: -0.5609 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: 0.1791 S13: -0.0058 REMARK 3 S21: -0.3389 S22: -0.0765 S23: -0.0737 REMARK 3 S31: 0.0481 S32: -0.0330 S33: -0.0192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6Q9T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980112 REMARK 200 MONOCHROMATOR : CHANNEL CUT CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 OPTICS : CRYOGENICALLY COOLED CHANNEL CUT REMARK 200 CRYSTAL MONOCHROMATOR, CONVEX REMARK 200 PREFOCUSSING MIRROR AND A REMARK 200 KIRKPATRICK-BAEZ PAIR OF REMARK 200 FOCUSSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION NOV 11, 2017 REMARK 200 BUILT=20171111 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION NOV 11, 2017 REMARK 200 BUILT=20171111 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8622 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.680 REMARK 200 RESOLUTION RANGE LOW (A) : 45.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 12.64 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 3KS3 REMARK 200 REMARK 200 REMARK: PARALLELOGRAM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE 0.2 M, SODIUM ACETATE REMARK 280 0.1 M PH 5.7, PEG 4000 14%, SODIUM AZIDE 3 MM, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.65000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.65000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 TRP A 5 REMARK 465 GLY A 6 REMARK 465 TYR A 7 REMARK 465 GLY A 8 REMARK 465 LYS A 9 REMARK 465 HIS A 10 REMARK 465 ASN A 11 REMARK 465 LEU A 228 REMARK 465 ASN A 229 REMARK 465 PHE A 230 REMARK 465 ASN A 231 REMARK 465 GLY A 232 REMARK 465 GLU A 233 REMARK 465 GLY A 234 REMARK 465 GLU A 235 REMARK 465 PRO A 236 REMARK 465 GLU A 237 REMARK 465 GLU A 238 REMARK 465 LEU A 239 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 14 CG CD OE1 OE2 REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 GLU A 26 CD OE1 OE2 REMARK 470 THR A 37 OG1 CG2 REMARK 470 LYS A 39 CD CE NZ REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 69 CD OE1 OE2 REMARK 470 ASP A 85 CG OD1 OD2 REMARK 470 SER A 99 OG REMARK 470 LEU A 100 CG CD1 CD2 REMARK 470 LYS A 132 CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 LEU A 163 CG CD1 CD2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 GLU A 186 CD OE1 OE2 REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 SER A 216 OG REMARK 470 VAL A 217 CG1 CG2 REMARK 470 SER A 219 OG REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LEU A 223 CG CD1 CD2 REMARK 470 LYS A 224 CD CE NZ REMARK 470 PHE A 225 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 VAL A 241 CG1 CG2 REMARK 470 ASP A 242 CG OD1 OD2 REMARK 470 ASN A 252 CG OD1 ND2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 13 -39.53 -33.86 REMARK 500 ILE A 33 78.54 -117.55 REMARK 500 LEU A 44 108.08 -55.03 REMARK 500 LEU A 57 -62.66 -122.21 REMARK 500 HIS A 64 -34.94 -137.63 REMARK 500 ALA A 65 -162.17 -168.03 REMARK 500 ALA A 77 102.44 -164.11 REMARK 500 SER A 99 -68.44 -102.44 REMARK 500 ASP A 138 32.01 -98.74 REMARK 500 SER A 151 151.21 -43.63 REMARK 500 VAL A 159 -71.61 -91.17 REMARK 500 PHE A 175 90.50 -162.89 REMARK 500 LEU A 188 40.28 -96.62 REMARK 500 PRO A 201 24.69 -78.19 REMARK 500 LEU A 202 25.16 47.78 REMARK 500 TRP A 244 -159.14 -135.67 REMARK 500 LYS A 251 -130.70 49.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 103.3 REMARK 620 3 HIS A 119 ND1 136.6 98.5 REMARK 620 4 6H0 A 302 N26 95.6 111.4 110.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues 6H0 A 302 and QUJ A REMARK 800 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QUJ A 303 and ZY9 A REMARK 800 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 304 and QVS A REMARK 800 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QVS A 305 and QUK A REMARK 800 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QUK A 306 and ZY9 A REMARK 800 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 307 and QVE A REMARK 800 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QVE A 308 and ZY9 A REMARK 800 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 309 and ZY9 A REMARK 800 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 310 and QVS A REMARK 800 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QVS A 311 and ZY9 A REMARK 800 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 312 and QDD A REMARK 800 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QDD A 313 and ZY9 A REMARK 800 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ZY9 A 314 and QVE A REMARK 800 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues QVE A 315 and QUK A REMARK 800 316 DBREF 6Q9T A 2 260 UNP P00918 CAH2_HUMAN 2 260 SEQRES 1 A 259 SER HIS HIS TRP GLY TYR GLY LYS HIS ASN GLY PRO GLU SEQRES 2 A 259 HIS TRP HIS LYS ASP PHE PRO ILE ALA LYS GLY GLU ARG SEQRES 3 A 259 GLN SER PRO VAL ASP ILE ASP THR HIS THR ALA LYS TYR SEQRES 4 A 259 ASP PRO SER LEU LYS PRO LEU SER VAL SER TYR ASP GLN SEQRES 5 A 259 ALA THR SER LEU ARG ILE LEU ASN ASN GLY HIS ALA PHE SEQRES 6 A 259 ASN VAL GLU PHE ASP ASP SER GLN ASP LYS ALA VAL LEU SEQRES 7 A 259 LYS GLY GLY PRO LEU ASP GLY THR TYR ARG LEU ILE GLN SEQRES 8 A 259 PHE HIS PHE HIS TRP GLY SER LEU ASP GLY GLN GLY SER SEQRES 9 A 259 GLU HIS THR VAL ASP LYS LYS LYS TYR ALA ALA GLU LEU SEQRES 10 A 259 HIS LEU VAL HIS TRP ASN THR LYS TYR GLY ASP PHE GLY SEQRES 11 A 259 LYS ALA VAL GLN GLN PRO ASP GLY LEU ALA VAL LEU GLY SEQRES 12 A 259 ILE PHE LEU LYS VAL GLY SER ALA LYS PRO GLY LEU GLN SEQRES 13 A 259 LYS VAL VAL ASP VAL LEU ASP SER ILE LYS THR LYS GLY SEQRES 14 A 259 LYS SER ALA ASP PHE THR ASN PHE ASP PRO ARG GLY LEU SEQRES 15 A 259 LEU PRO GLU SER LEU ASP TYR TRP THR TYR PRO GLY SER SEQRES 16 A 259 LEU THR THR PRO PRO LEU LEU GLU CYS VAL THR TRP ILE SEQRES 17 A 259 VAL LEU LYS GLU PRO ILE SER VAL SER SER GLU GLN VAL SEQRES 18 A 259 LEU LYS PHE ARG LYS LEU ASN PHE ASN GLY GLU GLY GLU SEQRES 19 A 259 PRO GLU GLU LEU MET VAL ASP ASN TRP ARG PRO ALA GLN SEQRES 20 A 259 PRO LEU LYS ASN ARG GLN ILE LYS ALA SER PHE LYS HET ZN A 301 1 HET 6H0 A 302 28 HET QUJ A 303 18 HET ZY9 A 304 10 HET QVS A 305 14 HET QUK A 306 18 HET ZY9 A 307 10 HET QVE A 308 18 HET ZY9 A 309 10 HET ZY9 A 310 10 HET QVS A 311 14 HET ZY9 A 312 10 HET QDD A 313 17 HET ZY9 A 314 10 HET QVE A 315 18 HET QUK A 316 19 HETNAM ZN ZINC ION HETNAM 6H0 ~{N}-[[3-(4-FORMAMIDOBUTOXY)PHENYL]METHYL]-4-SULFAMOYL- HETNAM 2 6H0 BENZAMIDE HETNAM QUJ 8-AZANYL-4-(2-METHYLPROPOXY)QUINOLINE-2-CARBOXYLIC ACID HETNAM ZY9 6-(AMINOMETHYL)PYRIDINE-2-CARBOXYLIC ACID HETNAM QVS 8-AZANYL-4-OXIDANYL-QUINOLINE-2-CARBOXYLIC ACID HETNAM QUK 8-AZANYL-4-(3-AZANYLPROPOXY)QUINOLINE-2-CARBOXYLIC ACID HETNAM QVE 8-AZANYL-4-(2-HYDROXY-2-OXOETHYLOXY)QUINOLINE-2- HETNAM 2 QVE CARBOXYLIC ACID HETNAM QDD 2-(8-AZANYL-2-METHANOYL-QUINOLIN-4-YL)ETHANOIC ACID FORMUL 2 ZN ZN 2+ FORMUL 3 6H0 C19 H23 N3 O5 S FORMUL 4 QUJ C14 H16 N2 O3 FORMUL 5 ZY9 6(C7 H8 N2 O2) FORMUL 6 QVS 2(C10 H8 N2 O3) FORMUL 7 QUK 2(C13 H15 N3 O3) FORMUL 9 QVE 2(C12 H10 N2 O5) FORMUL 14 QDD C12 H10 N2 O3 FORMUL 18 HOH *6(H2 O) HELIX 1 AA1 GLY A 12 TRP A 16 5 5 HELIX 2 AA2 PHE A 20 GLY A 25 5 6 HELIX 3 AA3 LYS A 126 GLY A 128 5 3 HELIX 4 AA4 ASP A 129 VAL A 134 1 6 HELIX 5 AA5 LYS A 153 ASP A 161 1 9 HELIX 6 AA6 VAL A 162 LYS A 167 5 6 HELIX 7 AA7 ASP A 179 LEU A 184 5 6 HELIX 8 AA8 SER A 218 LEU A 223 1 6 SHEET 1 AA1 6 LEU A 47 SER A 50 0 SHEET 2 AA1 6 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 AA1 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA1 6 PHE A 66 PHE A 70 -1 N PHE A 70 O ILE A 91 SHEET 5 AA1 6 SER A 56 ASN A 61 -1 N LEU A 60 O ASN A 67 SHEET 6 AA1 6 SER A 172 ASP A 174 -1 O ALA A 173 N ILE A 59 SHEET 1 AA2 8 LEU A 47 SER A 50 0 SHEET 2 AA2 8 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 AA2 8 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA2 8 ALA A 116 ASN A 124 -1 O VAL A 121 N GLN A 92 SHEET 5 AA2 8 LEU A 140 VAL A 149 -1 O ILE A 145 N LEU A 118 SHEET 6 AA2 8 VAL A 206 VAL A 217 1 O ILE A 209 N GLY A 144 SHEET 7 AA2 8 TYR A 190 GLY A 195 -1 N GLY A 195 O VAL A 206 SHEET 8 AA2 8 LYS A 256 ALA A 257 -1 O LYS A 256 N THR A 192 LINK C2 6H0 A 302 N QUJ A 303 1555 1555 1.35 LINK C QUJ A 303 N ZY9 A 304 1555 1555 1.34 LINK C ZY9 A 304 N QVS A 305 1555 1555 1.36 LINK C QVS A 305 N QUK A 306 1555 1555 1.37 LINK C QUK A 306 N ZY9 A 307 1555 1555 1.36 LINK C ZY9 A 307 N QVE A 308 1555 1555 1.40 LINK C QVE A 308 N ZY9 A 309 1555 1555 1.39 LINK C ZY9 A 309 N ZY9 A 310 1555 1555 1.36 LINK C ZY9 A 310 N QVS A 311 1555 1555 1.35 LINK C QVS A 311 N ZY9 A 312 1555 1555 1.34 LINK C ZY9 A 312 N QDD A 313 1555 1555 1.36 LINK C QDD A 313 N ZY9 A 314 1555 1555 1.33 LINK C ZY9 A 314 N QVE A 315 1555 1555 1.36 LINK C QVE A 315 N QUK A 316 1555 1555 1.35 LINK NE2 HIS A 94 ZN ZN A 301 1555 1555 2.21 LINK NE2 HIS A 96 ZN ZN A 301 1555 1555 2.09 LINK ND1 HIS A 119 ZN ZN A 301 1555 1555 2.14 LINK ZN ZN A 301 N26 6H0 A 302 1555 1555 2.11 CISPEP 1 SER A 29 PRO A 30 0 7.01 CISPEP 2 PRO A 200 PRO A 201 0 2.34 SITE 1 AC1 4 HIS A 94 HIS A 96 HIS A 119 6H0 A 302 SITE 1 AC2 14 GLN A 92 HIS A 94 HIS A 96 HIS A 119 SITE 2 AC2 14 PHE A 130 VAL A 142 LEU A 197 THR A 198 SITE 3 AC2 14 THR A 199 TRP A 208 ZN A 301 ZY9 A 304 SITE 4 AC2 14 QVS A 305 QUK A 306 SITE 1 AC3 4 6H0 A 302 QVS A 305 QUK A 306 ZY9 A 307 SITE 1 AC4 6 PHE A 20 6H0 A 302 QUJ A 303 QUK A 306 SITE 2 AC4 6 ZY9 A 307 QVE A 308 SITE 1 AC5 7 PHE A 20 6H0 A 302 QUJ A 303 ZY9 A 304 SITE 2 AC5 7 ZY9 A 307 QVE A 308 ZY9 A 309 SITE 1 AC6 8 PHE A 20 PRO A 201 QUJ A 303 ZY9 A 304 SITE 2 AC6 8 QVS A 305 QVE A 308 ZY9 A 309 ZY9 A 310 SITE 1 AC7 8 PHE A 20 PRO A 201 ZY9 A 304 QVS A 305 SITE 2 AC7 8 QUK A 306 ZY9 A 309 ZY9 A 310 QVS A 311 SITE 1 AC8 7 GLN A 135 QVS A 305 QUK A 306 ZY9 A 307 SITE 2 AC8 7 ZY9 A 310 QVS A 311 ZY9 A 312 SITE 1 AC9 8 ASP A 19 GLN A 135 QUK A 306 ZY9 A 307 SITE 2 AC9 8 QVE A 308 QVS A 311 ZY9 A 312 QDD A 313 SITE 1 AD1 8 ASP A 19 ZY9 A 307 QVE A 308 ZY9 A 309 SITE 2 AD1 8 ZY9 A 312 QDD A 313 ZY9 A 314 HOH A 403 SITE 1 AD2 8 LEU A 203 QVE A 308 ZY9 A 309 ZY9 A 310 SITE 2 AD2 8 QDD A 313 ZY9 A 314 QVE A 315 HOH A 403 SITE 1 AD3 7 LEU A 203 ZY9 A 309 ZY9 A 310 QVS A 311 SITE 2 AD3 7 ZY9 A 314 QVE A 315 QUK A 316 SITE 1 AD4 5 ZY9 A 310 QVS A 311 ZY9 A 312 QVE A 315 SITE 2 AD4 5 QUK A 316 SITE 1 AD5 10 PRO A 21 ILE A 22 SER A 48 VAL A 49 SITE 2 AD5 10 SER A 50 LYS A 80 QVS A 311 ZY9 A 312 SITE 3 AD5 10 QDD A 313 QUK A 316 SITE 1 AD6 13 PRO A 21 ILE A 22 SER A 48 VAL A 49 SITE 2 AD6 13 SER A 50 LYS A 80 ARG A 181 PRO A 185 SITE 3 AD6 13 LEU A 188 ZY9 A 312 QDD A 313 ZY9 A 314 SITE 4 AD6 13 HOH A 406 CRYST1 79.300 80.960 45.620 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012610 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012352 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021920 0.00000