HEADER IMMUNE SYSTEM 20-DEC-18 6QB1 TITLE 5676 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEU-GLY-GLN-GLN-GLN-PRO-ALA-PRO-PRO-GLN-GLN-PRO-TYR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS STRUCTURE FROM CYANA 2.1, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR L.CALVANESE,G.D'AURIA,F.FALCIGNO REVDAT 4 14-JUN-23 6QB1 1 REMARK REVDAT 3 01-MAY-19 6QB1 1 JRNL REVDAT 2 03-APR-19 6QB1 1 JRNL REVDAT 1 27-FEB-19 6QB1 0 JRNL AUTH L.CALVANESE,M.NANAYAKKARA,R.AITORO,M.SANSEVERINO, JRNL AUTH 2 A.L.TORNESELLO,L.FALCIGNO,G.D'AURIA,M.V.BARONE JRNL TITL STRUCTURAL INSIGHTS ON P31-43, A GLIADIN PEPTIDE ABLE TO JRNL TITL 2 PROMOTE AN INNATE BUT NOT AN ADAPTIVE RESPONSE IN CELIAC JRNL TITL 3 DISEASE. JRNL REF J.PEPT.SCI. V. 25 E3161 2019 JRNL REFN ISSN 1075-2617 JRNL PMID 30912242 JRNL DOI 10.1002/PSC.3161 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 62-NOE REMARK 4 REMARK 4 6QB1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013594. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.4 MM 1H 5676, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-1H ROESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 1910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 6 84.19 -69.81 REMARK 500 2 PRO A 12 87.32 -69.78 REMARK 500 3 GLN A 3 90.17 -160.25 REMARK 500 3 GLN A 5 73.38 -157.38 REMARK 500 3 ALA A 7 71.22 -173.70 REMARK 500 3 GLN A 11 71.47 -164.97 REMARK 500 3 PRO A 12 88.17 -69.79 REMARK 500 4 GLN A 4 80.00 -157.87 REMARK 500 4 PRO A 6 -175.90 -69.74 REMARK 500 4 PRO A 9 -176.98 -69.71 REMARK 500 4 GLN A 11 69.74 60.22 REMARK 500 4 PRO A 12 -179.28 -69.72 REMARK 500 5 PRO A 9 88.69 -69.79 REMARK 500 6 GLN A 3 54.98 -102.54 REMARK 500 6 PRO A 6 87.19 -69.83 REMARK 500 6 ALA A 7 71.75 -150.19 REMARK 500 6 PRO A 9 79.53 -69.79 REMARK 500 6 PRO A 12 -174.94 -69.72 REMARK 500 7 GLN A 4 47.48 -167.06 REMARK 500 8 GLN A 3 85.93 -159.30 REMARK 500 8 GLN A 4 88.96 56.67 REMARK 500 8 ALA A 7 72.82 53.73 REMARK 500 8 PRO A 12 -172.80 -69.76 REMARK 500 9 GLN A 3 60.71 -101.37 REMARK 500 9 GLN A 5 73.10 54.34 REMARK 500 9 ALA A 7 68.29 -164.42 REMARK 500 10 GLN A 3 47.08 -148.01 REMARK 500 10 GLN A 4 28.03 -149.10 REMARK 500 10 GLN A 5 70.38 -153.05 REMARK 500 10 ALA A 7 72.04 59.25 REMARK 500 11 GLN A 11 73.04 54.67 REMARK 500 11 PRO A 12 88.51 -69.76 REMARK 500 12 PRO A 6 86.23 -69.78 REMARK 500 12 ALA A 7 73.34 -157.82 REMARK 500 13 GLN A 5 69.86 61.26 REMARK 500 13 PRO A 6 -177.03 -69.80 REMARK 500 13 ALA A 7 160.42 63.65 REMARK 500 13 PRO A 12 83.94 -69.78 REMARK 500 14 GLN A 3 45.10 -166.35 REMARK 500 14 GLN A 5 70.80 61.21 REMARK 500 14 PRO A 6 89.05 -69.77 REMARK 500 14 GLN A 11 72.16 58.62 REMARK 500 14 PRO A 12 93.82 -69.77 REMARK 500 15 GLN A 3 31.83 -152.06 REMARK 500 16 GLN A 3 28.94 -151.68 REMARK 500 16 ALA A 7 73.68 52.46 REMARK 500 16 PRO A 12 91.17 -69.82 REMARK 500 17 PRO A 9 91.51 -69.77 REMARK 500 18 PRO A 12 -175.34 -69.78 REMARK 500 19 GLN A 3 87.54 56.50 REMARK 500 REMARK 500 THIS ENTRY HAS 95 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34343 RELATED DB: BMRB REMARK 900 5676 DBREF 6QB1 A 1 13 PDB 6QB1 6QB1 1 13 SEQRES 1 A 13 LEU GLY GLN GLN GLN PRO ALA PRO PRO GLN GLN PRO TYR CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1