HEADER SIGNALING PROTEIN 21-DEC-18 6QBQ TITLE STRUCTURE OF THE CORE DOMAINE OF KNR4, AN INTRINSICALLY DISORDERED TITLE 2 PROTEIN FROM SACCHAROMYCES CEREVISIAE - MUTANT S200A S203A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL WALL ASSEMBLY REGULATOR SMI1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KILLER TOXIN-RESISTANCE PROTEIN 4; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: SMI1, KNR4, KTR4, YGR229C, G8553; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CELL-WALL INTEGRITY, STRESS RESPONSE, BETA-GLUCAN SYNTHESIS, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.GUILLIEN,M.BATISTA,J.M.FRANCOIS,L.MOUREY,L.MAVEYRAUD,D.ZERBIB REVDAT 2 24-JAN-24 6QBQ 1 REMARK REVDAT 1 29-JAN-20 6QBQ 0 JRNL AUTH M.GUILLIEN,M.BATISTA,J.M.FRANCOIS,L.MOUREY,L.MAVEYRAUD, JRNL AUTH 2 D.ZERBIB JRNL TITL STRUCTURE OF THE CORE DOMAINE OF KNR4, AN INTRINSICALLY JRNL TITL 2 DISORDERED PROTEIN FROM SACCHAROMYCES CEREVISIAE - MUTANT JRNL TITL 3 S200A S203A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1169 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1598 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3512 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.86000 REMARK 3 B22 (A**2) : 2.86000 REMARK 3 B33 (A**2) : -9.27000 REMARK 3 B12 (A**2) : 1.43000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.313 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.207 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.116 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3636 ; 0.007 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 3122 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4958 ; 1.010 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7293 ; 0.816 ; 1.639 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 444 ; 6.425 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 195 ;38.297 ;24.103 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 543 ;14.654 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;13.099 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 471 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4123 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 709 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1794 ; 1.553 ; 6.057 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1793 ; 1.551 ; 6.054 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2232 ; 2.610 ; 9.062 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2233 ; 2.610 ; 9.066 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1842 ; 1.535 ; 6.138 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1843 ; 1.535 ; 6.141 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2726 ; 2.572 ; 9.146 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3978 ; 4.350 ;69.034 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3979 ; 4.349 ;69.061 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 84 343 B 84 343 6963 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 347 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8030 50.0930 55.2860 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.0186 REMARK 3 T33: 0.5227 T12: 0.0178 REMARK 3 T13: -0.0694 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 3.0447 L22: 3.3535 REMARK 3 L33: 2.7473 L12: 1.1577 REMARK 3 L13: -0.6814 L23: 0.6190 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.0288 S13: 0.0157 REMARK 3 S21: 0.1988 S22: 0.1644 S23: -0.2120 REMARK 3 S31: 0.0872 S32: -0.0686 S33: -0.1372 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 83 B 342 REMARK 3 ORIGIN FOR THE GROUP (A): -8.8070 22.9930 35.7040 REMARK 3 T TENSOR REMARK 3 T11: 0.0472 T22: 0.2387 REMARK 3 T33: 0.6397 T12: -0.0135 REMARK 3 T13: -0.0929 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 3.6164 L22: 4.6155 REMARK 3 L33: 4.1580 L12: 2.5818 REMARK 3 L13: 1.5229 L23: 1.4630 REMARK 3 S TENSOR REMARK 3 S11: -0.0347 S12: 0.3696 S13: -0.4946 REMARK 3 S21: -0.2670 S22: 0.3090 S23: -0.2160 REMARK 3 S31: 0.1341 S32: 0.5633 S33: -0.2743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6QBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 - 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23243 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.04100 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5J1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000 - 6000 15-24 % (W/V) BICINE REMARK 280 BUFFER 0.1 M, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.80000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.90000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.80000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.90000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 73 REMARK 465 PRO A 74 REMARK 465 LEU A 75 REMARK 465 GLY A 76 REMARK 465 SER A 77 REMARK 465 HIS A 78 REMARK 465 MET A 79 REMARK 465 SER A 80 REMARK 465 THR A 81 REMARK 465 GLU A 82 REMARK 465 SER A 83 REMARK 465 LEU A 149 REMARK 465 GLU A 150 REMARK 465 SER A 151 REMARK 465 MET A 152 REMARK 465 THR A 153 REMARK 465 GLY A 154 REMARK 465 GLN A 189 REMARK 465 GLN A 190 REMARK 465 GLY A 191 REMARK 465 LEU A 192 REMARK 465 SER A 193 REMARK 465 HIS A 194 REMARK 465 VAL A 195 REMARK 465 THR A 196 REMARK 465 SER A 197 REMARK 465 THR A 198 REMARK 465 GLY A 199 REMARK 465 ALA A 200 REMARK 465 SER A 201 REMARK 465 SER A 202 REMARK 465 ALA A 203 REMARK 465 MET A 204 REMARK 465 GLU A 205 REMARK 465 ARG A 206 REMARK 465 LEU A 207 REMARK 465 ASN A 208 REMARK 465 GLY A 209 REMARK 465 ASN A 210 REMARK 465 LYS A 211 REMARK 465 PHE A 212 REMARK 465 LYS A 213 REMARK 465 LEU A 214 REMARK 465 PRO A 215 REMARK 465 ASN A 216 REMARK 465 ILE A 217 REMARK 465 ASP A 304 REMARK 465 ASP A 305 REMARK 465 TYR A 306 REMARK 465 PHE A 307 REMARK 465 SER A 308 REMARK 465 GLY B 73 REMARK 465 PRO B 74 REMARK 465 LEU B 75 REMARK 465 GLY B 76 REMARK 465 SER B 77 REMARK 465 HIS B 78 REMARK 465 MET B 79 REMARK 465 SER B 80 REMARK 465 THR B 81 REMARK 465 GLU B 82 REMARK 465 ARG B 187 REMARK 465 SER B 188 REMARK 465 GLN B 189 REMARK 465 GLN B 190 REMARK 465 GLY B 191 REMARK 465 LEU B 192 REMARK 465 SER B 193 REMARK 465 HIS B 194 REMARK 465 VAL B 195 REMARK 465 THR B 196 REMARK 465 SER B 197 REMARK 465 THR B 198 REMARK 465 GLY B 199 REMARK 465 ALA B 200 REMARK 465 SER B 201 REMARK 465 SER B 202 REMARK 465 ALA B 203 REMARK 465 MET B 204 REMARK 465 GLU B 205 REMARK 465 ARG B 206 REMARK 465 LEU B 207 REMARK 465 ASN B 208 REMARK 465 GLY B 209 REMARK 465 ASN B 210 REMARK 465 LYS B 211 REMARK 465 PHE B 212 REMARK 465 LYS B 213 REMARK 465 LEU B 214 REMARK 465 PRO B 215 REMARK 465 ASN B 216 REMARK 465 ASN B 303 REMARK 465 ASP B 304 REMARK 465 ASP B 305 REMARK 465 TYR B 306 REMARK 465 PHE B 307 REMARK 465 SER B 308 REMARK 465 GLY B 309 REMARK 465 PRO B 344 REMARK 465 HIS B 345 REMARK 465 ARG B 346 REMARK 465 ASP B 347 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 103 CB CG CD OE1 OE2 REMARK 470 ASP A 148 CG OD1 OD2 REMARK 470 THR A 155 OG1 CG2 REMARK 470 ARG A 187 CG CD NE CZ NH1 NH2 REMARK 470 SER A 188 OG REMARK 470 ASP A 302 CG OD1 OD2 REMARK 470 ASN A 303 CG OD1 ND2 REMARK 470 ASP A 310 CG OD1 OD2 REMARK 470 LYS A 319 CE NZ REMARK 470 ASP A 347 CG OD1 OD2 REMARK 470 SER B 83 OG REMARK 470 ASN B 84 CG OD1 ND2 REMARK 470 ASP B 85 CG OD1 OD2 REMARK 470 ARG B 95 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 149 CG CD1 CD2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 MET B 152 CG SD CE REMARK 470 THR B 153 OG1 CG2 REMARK 470 LYS B 186 CG CD CE NZ REMARK 470 ILE B 217 CG1 CG2 CD1 REMARK 470 ASP B 301 CG OD1 OD2 REMARK 470 ASP B 302 CG OD1 OD2 REMARK 470 ASP B 310 CG OD1 OD2 REMARK 470 LEU B 341 CG CD1 CD2 REMARK 470 GLU B 342 CG CD OE1 OE2 REMARK 470 ARG B 343 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 105 74.41 -153.59 REMARK 500 PHE A 271 64.97 -118.62 REMARK 500 ASN B 105 74.18 -154.79 REMARK 500 ASP B 144 51.70 -93.98 REMARK 500 GLU B 147 -54.22 -122.79 REMARK 500 ASP B 148 71.04 49.33 REMARK 500 SER B 151 101.35 -161.67 REMARK 500 PRO B 218 -167.60 -73.64 REMARK 500 PHE B 271 63.86 -118.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J1B RELATED DB: PDB REMARK 900 5J1B CONTAINS THE WT PROTEIN REMARK 900 RELATED ID: 6QBR RELATED DB: PDB REMARK 900 RELATED ID: 6QBM RELATED DB: PDB REMARK 900 RELATED ID: 6QBO RELATED DB: PDB REMARK 900 RELATED ID: 6QBP RELATED DB: PDB REMARK 900 RELATED ID: 6QBN RELATED DB: PDB DBREF 6QBQ A 80 340 UNP P32566 SMI1_YEAST 80 340 DBREF 6QBQ B 80 340 UNP P32566 SMI1_YEAST 80 340 SEQADV 6QBQ GLY A 73 UNP P32566 EXPRESSION TAG SEQADV 6QBQ PRO A 74 UNP P32566 EXPRESSION TAG SEQADV 6QBQ LEU A 75 UNP P32566 EXPRESSION TAG SEQADV 6QBQ GLY A 76 UNP P32566 EXPRESSION TAG SEQADV 6QBQ SER A 77 UNP P32566 EXPRESSION TAG SEQADV 6QBQ HIS A 78 UNP P32566 EXPRESSION TAG SEQADV 6QBQ MET A 79 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ALA A 200 UNP P32566 SER 200 ENGINEERED MUTATION SEQADV 6QBQ ALA A 203 UNP P32566 SER 203 ENGINEERED MUTATION SEQADV 6QBQ LEU A 341 UNP P32566 EXPRESSION TAG SEQADV 6QBQ GLU A 342 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ARG A 343 UNP P32566 EXPRESSION TAG SEQADV 6QBQ PRO A 344 UNP P32566 EXPRESSION TAG SEQADV 6QBQ HIS A 345 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ARG A 346 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ASP A 347 UNP P32566 EXPRESSION TAG SEQADV 6QBQ GLY B 73 UNP P32566 EXPRESSION TAG SEQADV 6QBQ PRO B 74 UNP P32566 EXPRESSION TAG SEQADV 6QBQ LEU B 75 UNP P32566 EXPRESSION TAG SEQADV 6QBQ GLY B 76 UNP P32566 EXPRESSION TAG SEQADV 6QBQ SER B 77 UNP P32566 EXPRESSION TAG SEQADV 6QBQ HIS B 78 UNP P32566 EXPRESSION TAG SEQADV 6QBQ MET B 79 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ALA B 200 UNP P32566 SER 200 ENGINEERED MUTATION SEQADV 6QBQ ALA B 203 UNP P32566 SER 203 ENGINEERED MUTATION SEQADV 6QBQ LEU B 341 UNP P32566 EXPRESSION TAG SEQADV 6QBQ GLU B 342 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ARG B 343 UNP P32566 EXPRESSION TAG SEQADV 6QBQ PRO B 344 UNP P32566 EXPRESSION TAG SEQADV 6QBQ HIS B 345 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ARG B 346 UNP P32566 EXPRESSION TAG SEQADV 6QBQ ASP B 347 UNP P32566 EXPRESSION TAG SEQRES 1 A 275 GLY PRO LEU GLY SER HIS MET SER THR GLU SER ASN ASP SEQRES 2 A 275 GLY VAL SER GLU THR LEU LEU ALA TRP ARG HIS ILE ASP SEQRES 3 A 275 PHE TRP THR SER GLU HIS ASN PRO ASP LEU ASN ALA THR SEQRES 4 A 275 LEU SER ASP PRO CYS THR GLN ASN ASP ILE THR HIS ALA SEQRES 5 A 275 GLU GLU ASP LEU GLU VAL SER PHE PRO ASN PRO VAL LYS SEQRES 6 A 275 ALA SER PHE LYS ILE HIS ASP GLY GLN GLU ASP LEU GLU SEQRES 7 A 275 SER MET THR GLY THR SER GLY LEU PHE TYR GLY PHE GLN SEQRES 8 A 275 LEU MET THR LEU ASP GLN VAL VAL ALA MET THR GLN ALA SEQRES 9 A 275 TRP ARG ASN VAL ALA LYS ASN LEU ASN LYS ARG SER GLN SEQRES 10 A 275 GLN GLY LEU SER HIS VAL THR SER THR GLY ALA SER SER SEQRES 11 A 275 ALA MET GLU ARG LEU ASN GLY ASN LYS PHE LYS LEU PRO SEQRES 12 A 275 ASN ILE PRO ASP GLN LYS SER ILE PRO PRO ASN ALA VAL SEQRES 13 A 275 GLN PRO VAL TYR ALA HIS PRO ALA TRP ILE PRO LEU ILE SEQRES 14 A 275 THR ASP ASN ALA GLY ASN HIS ILE GLY VAL ASP LEU ALA SEQRES 15 A 275 PRO GLY PRO ASN GLY LYS TYR ALA GLN ILE ILE THR PHE SEQRES 16 A 275 GLY ARG ASP PHE ASP THR LYS PHE VAL ILE ALA GLU ASN SEQRES 17 A 275 TRP GLY GLU PHE LEU LEU SER PHE ALA ASN ASP LEU GLU SEQRES 18 A 275 ALA GLY ASN TRP TYR LEU VAL ASP ASP ASN ASP ASP TYR SEQRES 19 A 275 PHE SER GLY ASP GLY GLU LEU VAL PHE ARG ASP LYS LYS SEQRES 20 A 275 SER ASN GLY PRO ILE GLN ASP TYR PHE GLU VAL LEU LYS SEQRES 21 A 275 ARG ARG THR TRP ILE LYS TYR GLN LEU GLU ARG PRO HIS SEQRES 22 A 275 ARG ASP SEQRES 1 B 275 GLY PRO LEU GLY SER HIS MET SER THR GLU SER ASN ASP SEQRES 2 B 275 GLY VAL SER GLU THR LEU LEU ALA TRP ARG HIS ILE ASP SEQRES 3 B 275 PHE TRP THR SER GLU HIS ASN PRO ASP LEU ASN ALA THR SEQRES 4 B 275 LEU SER ASP PRO CYS THR GLN ASN ASP ILE THR HIS ALA SEQRES 5 B 275 GLU GLU ASP LEU GLU VAL SER PHE PRO ASN PRO VAL LYS SEQRES 6 B 275 ALA SER PHE LYS ILE HIS ASP GLY GLN GLU ASP LEU GLU SEQRES 7 B 275 SER MET THR GLY THR SER GLY LEU PHE TYR GLY PHE GLN SEQRES 8 B 275 LEU MET THR LEU ASP GLN VAL VAL ALA MET THR GLN ALA SEQRES 9 B 275 TRP ARG ASN VAL ALA LYS ASN LEU ASN LYS ARG SER GLN SEQRES 10 B 275 GLN GLY LEU SER HIS VAL THR SER THR GLY ALA SER SER SEQRES 11 B 275 ALA MET GLU ARG LEU ASN GLY ASN LYS PHE LYS LEU PRO SEQRES 12 B 275 ASN ILE PRO ASP GLN LYS SER ILE PRO PRO ASN ALA VAL SEQRES 13 B 275 GLN PRO VAL TYR ALA HIS PRO ALA TRP ILE PRO LEU ILE SEQRES 14 B 275 THR ASP ASN ALA GLY ASN HIS ILE GLY VAL ASP LEU ALA SEQRES 15 B 275 PRO GLY PRO ASN GLY LYS TYR ALA GLN ILE ILE THR PHE SEQRES 16 B 275 GLY ARG ASP PHE ASP THR LYS PHE VAL ILE ALA GLU ASN SEQRES 17 B 275 TRP GLY GLU PHE LEU LEU SER PHE ALA ASN ASP LEU GLU SEQRES 18 B 275 ALA GLY ASN TRP TYR LEU VAL ASP ASP ASN ASP ASP TYR SEQRES 19 B 275 PHE SER GLY ASP GLY GLU LEU VAL PHE ARG ASP LYS LYS SEQRES 20 B 275 SER ASN GLY PRO ILE GLN ASP TYR PHE GLU VAL LEU LYS SEQRES 21 B 275 ARG ARG THR TRP ILE LYS TYR GLN LEU GLU ARG PRO HIS SEQRES 22 B 275 ARG ASP FORMUL 3 HOH *10(H2 O) HELIX 1 AA1 GLY A 86 ASN A 105 1 20 HELIX 2 AA2 ASN A 105 ALA A 110 1 6 HELIX 3 AA3 THR A 117 GLU A 129 1 13 HELIX 4 AA4 PRO A 133 LYS A 141 1 9 HELIX 5 AA5 THR A 166 ARG A 187 1 22 HELIX 6 AA6 ASN A 280 GLY A 295 1 16 HELIX 7 AA7 ASP A 326 ARG A 343 1 18 HELIX 8 AA8 GLY B 86 ASN B 105 1 20 HELIX 9 AA9 ASN B 105 ALA B 110 1 6 HELIX 10 AB1 THR B 117 GLU B 129 1 13 HELIX 11 AB2 PRO B 133 LYS B 141 1 9 HELIX 12 AB3 THR B 166 LYS B 186 1 21 HELIX 13 AB4 ASN B 280 GLY B 295 1 16 HELIX 14 AB5 ASP B 326 ARG B 343 1 18 SHEET 1 AA1 6 LYS A 221 ILE A 223 0 SHEET 2 AA1 6 THR A 273 ALA A 278 1 O LYS A 274 N LYS A 221 SHEET 3 AA1 6 GLN A 263 GLY A 268 -1 N ILE A 264 O ALA A 278 SHEET 4 AA1 6 ASN A 247 ASP A 252 -1 N HIS A 248 O PHE A 267 SHEET 5 AA1 6 TRP A 237 THR A 242 -1 N LEU A 240 O ILE A 249 SHEET 6 AA1 6 GLY A 157 LEU A 164 -1 O GLN A 163 N THR A 242 SHEET 1 AA2 2 TYR A 298 VAL A 300 0 SHEET 2 AA2 2 GLU A 312 VAL A 314 -1 O GLU A 312 N VAL A 300 SHEET 1 AA3 6 LYS B 221 ILE B 223 0 SHEET 2 AA3 6 THR B 273 ALA B 278 1 O LYS B 274 N LYS B 221 SHEET 3 AA3 6 GLN B 263 GLY B 268 -1 N ILE B 264 O ALA B 278 SHEET 4 AA3 6 ASN B 247 ASP B 252 -1 N HIS B 248 O PHE B 267 SHEET 5 AA3 6 TRP B 237 THR B 242 -1 N LEU B 240 O ILE B 249 SHEET 6 AA3 6 GLY B 157 LEU B 164 -1 O GLN B 163 N THR B 242 SHEET 1 AA4 2 TYR B 298 VAL B 300 0 SHEET 2 AA4 2 GLU B 312 VAL B 314 -1 O VAL B 314 N TYR B 298 CISPEP 1 ILE A 223 PRO A 224 0 -4.11 CISPEP 2 ILE B 223 PRO B 224 0 -3.89 CRYST1 102.816 102.816 92.700 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009726 0.005615 0.000000 0.00000 SCALE2 0.000000 0.011231 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010787 0.00000