data_6QCC # _entry.id 6QCC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6QCC WWPDB D_1200013610 EMDB EMD-4504 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2019-05-01 _pdbx_database_PDB_obs_spr.pdb_id 6QCC _pdbx_database_PDB_obs_spr.replace_pdb_id 5NPX _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM Atomic Structure of Broad Bean Stain Virus (BBSV)' _pdbx_database_related.db_id EMD-4504 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6QCC _pdbx_database_status.recvd_initial_deposition_date 2018-12-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lecorre, F.' 1 ? 'Lai Jee Him, J.' 2 ? 'Blanc, S.' 3 0000-0002-3412-0989 'Zeddam, J.-L.' 4 ? 'Trapani, S.' 5 ? 'Bron, P.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Virology _citation.journal_id_ASTM VIRLAX _citation.journal_id_CSD 0922 _citation.journal_id_ISSN 0042-6822 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 530 _citation.language ? _citation.page_first 75 _citation.page_last 84 _citation.title 'The cryo-electron microscopy structure of Broad Bean Stain Virus suggests a common capsid assembly mechanism among comoviruses.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.virol.2019.02.009 _citation.pdbx_database_id_PubMed 30782565 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lecorre, F.' 1 ? primary 'Lai-Kee-Him, J.' 2 ? primary 'Blanc, S.' 3 ? primary 'Zeddam, J.L.' 4 ? primary 'Trapani, S.' 5 ? primary 'Bron, P.' 6 ? # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 6QCC _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QCC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Large coat-protein subunit' 41247.977 1 ? ? ? ? 2 polymer nat 'Small coat-protein subunit' 23589.662 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MDVDLFKLSLDDTSSVKGSLLDTRFAQVRVVIPKAMAGGNELLNSNLYDILVVDNNFRAAAALAHTHIIEGQIKCVCTIN LPENTGCCLALCVNSSNRGQFSTDIYTIGSQDRMLWNPACSKNSTFTFNPNPCGTGWSLEFLRRTKFHISVVCVSGWSAQ PQTDLVMTMDFFVANVPCVPRIYNLGSPGQTLWLNRWMGKLSFGQGVSNDIKSMPLAIGGGAGAKDSILMNMTNAYLSLW RYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGVSFQPELEDFPNKLVQFSEVQEKIELKFTRAEFLTAWSTQVDPAAQLAN DGCPYLYAMVHDSTASTIVGDFNLGVTLTRIENFAGIGCNPGIQGARLLGSAIATPQ ; ;MDVDLFKLSLDDTSSVKGSLLDTRFAQVRVVIPKAMAGGNELLNSNLYDILVVDNNFRAAAALAHTHIIEGQIKCVCTIN LPENTGCCLALCVNSSNRGQFSTDIYTIGSQDRMLWNPACSKNSTFTFNPNPCGTGWSLEFLRRTKFHISVVCVSGWSAQ PQTDLVMTMDFFVANVPCVPRIYNLGSPGQTLWLNRWMGKLSFGQGVSNDIKSMPLAIGGGAGAKDSILMNMTNAYLSLW RYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGVSFQPELEDFPNKLVQFSEVQEKIELKFTRAEFLTAWSTQVDPAAQLAN DGCPYLYAMVHDSTASTIVGDFNLGVTLTRIENFAGIGCNPGIQGARLLGSAIATPQ ; A ? 2 'polypeptide(L)' no no ;NAVVRSSPGIYSNCFSLRAPLKPDGPKSFTCDLMGGGVVTDGDTGWQVTVRNTPVSNLLRTAAWKRGTVHVQVVLAGASV KRSDWDSTVQIFLRQSMATSSYDAKIWDICQPGAAMLEFSFDVVGPNSGFEMWDSNWASQTSWFLEFLISNPAQNTLFEV NLRLDENFSVAGTTLMPPFVLDRVSVARPLLGKQTKTVARSARVVRETKEASESP ; ;NAVVRSSPGIYSNCFSLRAPLKPDGPKSFTCDLMGGGVVTDGDTGWQVTVRNTPVSNLLRTAAWKRGTVHVQVVLAGASV KRSDWDSTVQIFLRQSMATSSYDAKIWDICQPGAAMLEFSFDVVGPNSGFEMWDSNWASQTSWFLEFLISNPAQNTLFEV NLRLDENFSVAGTTLMPPFVLDRVSVARPLLGKQTKTVARSARVVRETKEASESP ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 VAL n 1 4 ASP n 1 5 LEU n 1 6 PHE n 1 7 LYS n 1 8 LEU n 1 9 SER n 1 10 LEU n 1 11 ASP n 1 12 ASP n 1 13 THR n 1 14 SER n 1 15 SER n 1 16 VAL n 1 17 LYS n 1 18 GLY n 1 19 SER n 1 20 LEU n 1 21 LEU n 1 22 ASP n 1 23 THR n 1 24 ARG n 1 25 PHE n 1 26 ALA n 1 27 GLN n 1 28 VAL n 1 29 ARG n 1 30 VAL n 1 31 VAL n 1 32 ILE n 1 33 PRO n 1 34 LYS n 1 35 ALA n 1 36 MET n 1 37 ALA n 1 38 GLY n 1 39 GLY n 1 40 ASN n 1 41 GLU n 1 42 LEU n 1 43 LEU n 1 44 ASN n 1 45 SER n 1 46 ASN n 1 47 LEU n 1 48 TYR n 1 49 ASP n 1 50 ILE n 1 51 LEU n 1 52 VAL n 1 53 VAL n 1 54 ASP n 1 55 ASN n 1 56 ASN n 1 57 PHE n 1 58 ARG n 1 59 ALA n 1 60 ALA n 1 61 ALA n 1 62 ALA n 1 63 LEU n 1 64 ALA n 1 65 HIS n 1 66 THR n 1 67 HIS n 1 68 ILE n 1 69 ILE n 1 70 GLU n 1 71 GLY n 1 72 GLN n 1 73 ILE n 1 74 LYS n 1 75 CYS n 1 76 VAL n 1 77 CYS n 1 78 THR n 1 79 ILE n 1 80 ASN n 1 81 LEU n 1 82 PRO n 1 83 GLU n 1 84 ASN n 1 85 THR n 1 86 GLY n 1 87 CYS n 1 88 CYS n 1 89 LEU n 1 90 ALA n 1 91 LEU n 1 92 CYS n 1 93 VAL n 1 94 ASN n 1 95 SER n 1 96 SER n 1 97 ASN n 1 98 ARG n 1 99 GLY n 1 100 GLN n 1 101 PHE n 1 102 SER n 1 103 THR n 1 104 ASP n 1 105 ILE n 1 106 TYR n 1 107 THR n 1 108 ILE n 1 109 GLY n 1 110 SER n 1 111 GLN n 1 112 ASP n 1 113 ARG n 1 114 MET n 1 115 LEU n 1 116 TRP n 1 117 ASN n 1 118 PRO n 1 119 ALA n 1 120 CYS n 1 121 SER n 1 122 LYS n 1 123 ASN n 1 124 SER n 1 125 THR n 1 126 PHE n 1 127 THR n 1 128 PHE n 1 129 ASN n 1 130 PRO n 1 131 ASN n 1 132 PRO n 1 133 CYS n 1 134 GLY n 1 135 THR n 1 136 GLY n 1 137 TRP n 1 138 SER n 1 139 LEU n 1 140 GLU n 1 141 PHE n 1 142 LEU n 1 143 ARG n 1 144 ARG n 1 145 THR n 1 146 LYS n 1 147 PHE n 1 148 HIS n 1 149 ILE n 1 150 SER n 1 151 VAL n 1 152 VAL n 1 153 CYS n 1 154 VAL n 1 155 SER n 1 156 GLY n 1 157 TRP n 1 158 SER n 1 159 ALA n 1 160 GLN n 1 161 PRO n 1 162 GLN n 1 163 THR n 1 164 ASP n 1 165 LEU n 1 166 VAL n 1 167 MET n 1 168 THR n 1 169 MET n 1 170 ASP n 1 171 PHE n 1 172 PHE n 1 173 VAL n 1 174 ALA n 1 175 ASN n 1 176 VAL n 1 177 PRO n 1 178 CYS n 1 179 VAL n 1 180 PRO n 1 181 ARG n 1 182 ILE n 1 183 TYR n 1 184 ASN n 1 185 LEU n 1 186 GLY n 1 187 SER n 1 188 PRO n 1 189 GLY n 1 190 GLN n 1 191 THR n 1 192 LEU n 1 193 TRP n 1 194 LEU n 1 195 ASN n 1 196 ARG n 1 197 TRP n 1 198 MET n 1 199 GLY n 1 200 LYS n 1 201 LEU n 1 202 SER n 1 203 PHE n 1 204 GLY n 1 205 GLN n 1 206 GLY n 1 207 VAL n 1 208 SER n 1 209 ASN n 1 210 ASP n 1 211 ILE n 1 212 LYS n 1 213 SER n 1 214 MET n 1 215 PRO n 1 216 LEU n 1 217 ALA n 1 218 ILE n 1 219 GLY n 1 220 GLY n 1 221 GLY n 1 222 ALA n 1 223 GLY n 1 224 ALA n 1 225 LYS n 1 226 ASP n 1 227 SER n 1 228 ILE n 1 229 LEU n 1 230 MET n 1 231 ASN n 1 232 MET n 1 233 THR n 1 234 ASN n 1 235 ALA n 1 236 TYR n 1 237 LEU n 1 238 SER n 1 239 LEU n 1 240 TRP n 1 241 ARG n 1 242 TYR n 1 243 PHE n 1 244 HIS n 1 245 GLY n 1 246 ASP n 1 247 LEU n 1 248 VAL n 1 249 PHE n 1 250 GLU n 1 251 VAL n 1 252 ASN n 1 253 LYS n 1 254 MET n 1 255 SER n 1 256 SER n 1 257 PRO n 1 258 TYR n 1 259 ILE n 1 260 LYS n 1 261 SER n 1 262 THR n 1 263 VAL n 1 264 THR n 1 265 PHE n 1 266 PHE n 1 267 ILE n 1 268 GLY n 1 269 PHE n 1 270 GLY n 1 271 GLY n 1 272 VAL n 1 273 SER n 1 274 PHE n 1 275 GLN n 1 276 PRO n 1 277 GLU n 1 278 LEU n 1 279 GLU n 1 280 ASP n 1 281 PHE n 1 282 PRO n 1 283 ASN n 1 284 LYS n 1 285 LEU n 1 286 VAL n 1 287 GLN n 1 288 PHE n 1 289 SER n 1 290 GLU n 1 291 VAL n 1 292 GLN n 1 293 GLU n 1 294 LYS n 1 295 ILE n 1 296 GLU n 1 297 LEU n 1 298 LYS n 1 299 PHE n 1 300 THR n 1 301 ARG n 1 302 ALA n 1 303 GLU n 1 304 PHE n 1 305 LEU n 1 306 THR n 1 307 ALA n 1 308 TRP n 1 309 SER n 1 310 THR n 1 311 GLN n 1 312 VAL n 1 313 ASP n 1 314 PRO n 1 315 ALA n 1 316 ALA n 1 317 GLN n 1 318 LEU n 1 319 ALA n 1 320 ASN n 1 321 ASP n 1 322 GLY n 1 323 CYS n 1 324 PRO n 1 325 TYR n 1 326 LEU n 1 327 TYR n 1 328 ALA n 1 329 MET n 1 330 VAL n 1 331 HIS n 1 332 ASP n 1 333 SER n 1 334 THR n 1 335 ALA n 1 336 SER n 1 337 THR n 1 338 ILE n 1 339 VAL n 1 340 GLY n 1 341 ASP n 1 342 PHE n 1 343 ASN n 1 344 LEU n 1 345 GLY n 1 346 VAL n 1 347 THR n 1 348 LEU n 1 349 THR n 1 350 ARG n 1 351 ILE n 1 352 GLU n 1 353 ASN n 1 354 PHE n 1 355 ALA n 1 356 GLY n 1 357 ILE n 1 358 GLY n 1 359 CYS n 1 360 ASN n 1 361 PRO n 1 362 GLY n 1 363 ILE n 1 364 GLN n 1 365 GLY n 1 366 ALA n 1 367 ARG n 1 368 LEU n 1 369 LEU n 1 370 GLY n 1 371 SER n 1 372 ALA n 1 373 ILE n 1 374 ALA n 1 375 THR n 1 376 PRO n 1 377 GLN n 2 1 ASN n 2 2 ALA n 2 3 VAL n 2 4 VAL n 2 5 ARG n 2 6 SER n 2 7 SER n 2 8 PRO n 2 9 GLY n 2 10 ILE n 2 11 TYR n 2 12 SER n 2 13 ASN n 2 14 CYS n 2 15 PHE n 2 16 SER n 2 17 LEU n 2 18 ARG n 2 19 ALA n 2 20 PRO n 2 21 LEU n 2 22 LYS n 2 23 PRO n 2 24 ASP n 2 25 GLY n 2 26 PRO n 2 27 LYS n 2 28 SER n 2 29 PHE n 2 30 THR n 2 31 CYS n 2 32 ASP n 2 33 LEU n 2 34 MET n 2 35 GLY n 2 36 GLY n 2 37 GLY n 2 38 VAL n 2 39 VAL n 2 40 THR n 2 41 ASP n 2 42 GLY n 2 43 ASP n 2 44 THR n 2 45 GLY n 2 46 TRP n 2 47 GLN n 2 48 VAL n 2 49 THR n 2 50 VAL n 2 51 ARG n 2 52 ASN n 2 53 THR n 2 54 PRO n 2 55 VAL n 2 56 SER n 2 57 ASN n 2 58 LEU n 2 59 LEU n 2 60 ARG n 2 61 THR n 2 62 ALA n 2 63 ALA n 2 64 TRP n 2 65 LYS n 2 66 ARG n 2 67 GLY n 2 68 THR n 2 69 VAL n 2 70 HIS n 2 71 VAL n 2 72 GLN n 2 73 VAL n 2 74 VAL n 2 75 LEU n 2 76 ALA n 2 77 GLY n 2 78 ALA n 2 79 SER n 2 80 VAL n 2 81 LYS n 2 82 ARG n 2 83 SER n 2 84 ASP n 2 85 TRP n 2 86 ASP n 2 87 SER n 2 88 THR n 2 89 VAL n 2 90 GLN n 2 91 ILE n 2 92 PHE n 2 93 LEU n 2 94 ARG n 2 95 GLN n 2 96 SER n 2 97 MET n 2 98 ALA n 2 99 THR n 2 100 SER n 2 101 SER n 2 102 TYR n 2 103 ASP n 2 104 ALA n 2 105 LYS n 2 106 ILE n 2 107 TRP n 2 108 ASP n 2 109 ILE n 2 110 CYS n 2 111 GLN n 2 112 PRO n 2 113 GLY n 2 114 ALA n 2 115 ALA n 2 116 MET n 2 117 LEU n 2 118 GLU n 2 119 PHE n 2 120 SER n 2 121 PHE n 2 122 ASP n 2 123 VAL n 2 124 VAL n 2 125 GLY n 2 126 PRO n 2 127 ASN n 2 128 SER n 2 129 GLY n 2 130 PHE n 2 131 GLU n 2 132 MET n 2 133 TRP n 2 134 ASP n 2 135 SER n 2 136 ASN n 2 137 TRP n 2 138 ALA n 2 139 SER n 2 140 GLN n 2 141 THR n 2 142 SER n 2 143 TRP n 2 144 PHE n 2 145 LEU n 2 146 GLU n 2 147 PHE n 2 148 LEU n 2 149 ILE n 2 150 SER n 2 151 ASN n 2 152 PRO n 2 153 ALA n 2 154 GLN n 2 155 ASN n 2 156 THR n 2 157 LEU n 2 158 PHE n 2 159 GLU n 2 160 VAL n 2 161 ASN n 2 162 LEU n 2 163 ARG n 2 164 LEU n 2 165 ASP n 2 166 GLU n 2 167 ASN n 2 168 PHE n 2 169 SER n 2 170 VAL n 2 171 ALA n 2 172 GLY n 2 173 THR n 2 174 THR n 2 175 LEU n 2 176 MET n 2 177 PRO n 2 178 PRO n 2 179 PHE n 2 180 VAL n 2 181 LEU n 2 182 ASP n 2 183 ARG n 2 184 VAL n 2 185 SER n 2 186 VAL n 2 187 ALA n 2 188 ARG n 2 189 PRO n 2 190 LEU n 2 191 LEU n 2 192 GLY n 2 193 LYS n 2 194 GLN n 2 195 THR n 2 196 LYS n 2 197 THR n 2 198 VAL n 2 199 ALA n 2 200 ARG n 2 201 SER n 2 202 ALA n 2 203 ARG n 2 204 VAL n 2 205 VAL n 2 206 ARG n 2 207 GLU n 2 208 THR n 2 209 LYS n 2 210 GLU n 2 211 ALA n 2 212 SER n 2 213 GLU n 2 214 SER n 2 215 PRO n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 377 ? 'Broad bean stain virus' 593572 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 215 ? 'Broad bean stain virus' 593572 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP D0PSV7_9SECO D0PSV7 ? 1 ;MDVDLFKLSLDDTSSVKGSLLDTRFAQVRVVIPKAMAGGNELLNNNLYDILVVGNNFRAAAALAHTHIIEGQIKCVCTIN LPENTGCCLALCVNSSNRGQFSTDIYTIGSQDRMLWNPACSKNSTFTFNPNPCSTGWSLEFLRRTKFHISVVCVSGWSAQ PQTDLVMTMDFFVANVPCVPRIYNLGSPGQTLWLNRWMGKLSFGQGVSNDIKSMPLAIGGGAGAKDSILMNMTNAYLSLW RYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGVSFEPELEDFPNKLVQFSEVQEKIELKFTRAEFLTAWSTQVDPAAQLAN DGCPYLYAMVHDSTASTIVGDFNLGVTLTRIENFAGIGCNPGIQGARLLGSAIATPQ ; 399 2 UNP D0PSV7_9SECO D0PSV7 ? 2 ;NAVIRSSPGIYSNCFSLRAPLKPDGLKSFTCDLMGGGVVTDGDTGWQVTVRNTPVSNLLRTAAWKRGTVHVQVVLAGASV KRSDWDSTVQIFLRQSMATSSYDAKIWDICQPGAAMLEFSFDVVGPNSGFEMWDSNWASQTSWFLEFLISNPAQNTLFEV NLRLDENFSVAGTTLMPPFVLDRVSVARPLLGKQTKTIARSARVVRETKEASESP ; 776 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6QCC A 1 ? 377 ? D0PSV7 399 ? 775 ? 1 377 2 2 6QCC B 1 ? 215 ? D0PSV7 776 ? 990 ? 378 592 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6QCC SER A 45 ? UNP D0PSV7 ASN 443 conflict 45 1 1 6QCC ASP A 54 ? UNP D0PSV7 GLY 452 conflict 54 2 1 6QCC GLY A 134 ? UNP D0PSV7 SER 532 conflict 134 3 1 6QCC GLN A 275 ? UNP D0PSV7 GLU 673 conflict 275 4 2 6QCC VAL B 4 ? UNP D0PSV7 ILE 779 conflict 381 5 2 6QCC PRO B 26 ? UNP D0PSV7 LEU 801 conflict 403 6 2 6QCC VAL B 198 ? UNP D0PSV7 ILE 973 conflict 575 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QCC _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6QCC _struct.title 'Cryo-EM Atomic Structure of Broad Bean Stain Virus (BBSV)' _struct.pdbx_descriptor 'viral capsid protein large subunit, Polyprotein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QCC _struct_keywords.text 'comovirus capsid plant virus BBSV, virus' _struct_keywords.pdbx_keywords VIRUS # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 4 ? LEU A 8 ? ASP A 4 LEU A 8 5 ? 5 HELX_P HELX_P2 AA2 LEU A 47 ? VAL A 52 ? LEU A 47 VAL A 52 1 ? 6 HELX_P HELX_P3 AA3 ALA A 60 ? HIS A 65 ? ALA A 60 HIS A 65 1 ? 6 HELX_P HELX_P4 AA4 ASP A 104 ? GLY A 109 ? ASP A 104 GLY A 109 1 ? 6 HELX_P HELX_P5 AA5 SER A 138 ? THR A 145 ? SER A 138 THR A 145 1 ? 8 HELX_P HELX_P6 AA6 ASN A 231 ? SER A 238 ? ASN A 231 SER A 238 1 ? 8 HELX_P HELX_P7 AA7 GLN A 275 ? GLU A 279 ? GLN A 275 GLU A 279 5 ? 5 HELX_P HELX_P8 AA8 THR B 53 ? THR B 61 ? THR B 430 THR B 438 1 ? 9 HELX_P HELX_P9 AA9 LYS B 81 ? TRP B 85 ? LYS B 458 TRP B 462 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 4 ? AA8 ? 3 ? AA9 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AA9 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 26 ? ILE A 32 ? ALA A 26 ILE A 32 AA1 2 LEU A 165 ? VAL A 173 ? LEU A 165 VAL A 173 AA1 3 ILE A 73 ? THR A 78 ? ILE A 73 THR A 78 AA1 4 ASN A 123 ? PHE A 128 ? ASN A 123 PHE A 128 AA2 1 GLU A 41 ? ASN A 46 ? GLU A 41 ASN A 46 AA2 2 HIS A 148 ? SER A 155 ? HIS A 148 SER A 155 AA2 3 CYS A 88 ? ASN A 94 ? CYS A 88 ASN A 94 AA2 4 ASP A 112 ? TRP A 116 ? ASP A 112 TRP A 116 AA3 1 SER A 96 ? ASN A 97 ? SER A 96 ASN A 97 AA3 2 SER B 169 ? LEU B 175 ? SER B 546 LEU B 552 AA3 3 ALA B 62 ? GLY B 77 ? ALA B 439 GLY B 454 AA3 4 ASN B 155 ? LEU B 164 ? ASN B 532 LEU B 541 AA3 5 SER B 12 ? ARG B 18 ? SER B 389 ARG B 395 AA3 6 GLN B 47 ? VAL B 50 ? GLN B 424 VAL B 427 AA4 1 TYR A 183 ? ASN A 184 ? TYR A 183 ASN A 184 AA4 2 SER B 169 ? LEU B 175 ? SER B 546 LEU B 552 AA4 3 ALA B 62 ? GLY B 77 ? ALA B 439 GLY B 454 AA4 4 ALA B 114 ? VAL B 123 ? ALA B 491 VAL B 500 AA5 1 THR A 191 ? PHE A 203 ? THR A 191 PHE A 203 AA5 2 PHE A 342 ? ILE A 357 ? PHE A 342 ILE A 357 AA5 3 TYR A 242 ? LYS A 253 ? TYR A 242 LYS A 253 AA5 4 LYS A 294 ? PHE A 299 ? LYS A 294 PHE A 299 AA6 1 THR A 191 ? PHE A 203 ? THR A 191 PHE A 203 AA6 2 PHE A 342 ? ILE A 357 ? PHE A 342 ILE A 357 AA6 3 TYR A 242 ? LYS A 253 ? TYR A 242 LYS A 253 AA6 4 TRP A 308 ? SER A 309 ? TRP A 308 SER A 309 AA7 1 ILE A 211 ? PRO A 215 ? ILE A 211 PRO A 215 AA7 2 PRO A 324 ? VAL A 330 ? PRO A 324 VAL A 330 AA7 3 THR A 262 ? PHE A 269 ? THR A 262 PHE A 269 AA7 4 LYS A 284 ? GLN A 287 ? LYS A 284 GLN A 287 AA8 1 ALA A 222 ? ALA A 224 ? ALA A 222 ALA A 224 AA8 2 SER A 227 ? LEU A 229 ? SER A 227 LEU A 229 AA8 3 PHE B 179 ? VAL B 180 ? PHE B 556 VAL B 557 AA9 1 GLY B 37 ? ASP B 41 ? GLY B 414 ASP B 418 AA9 2 LYS B 27 ? ASP B 32 ? LYS B 404 ASP B 409 AA9 3 PHE B 144 ? ILE B 149 ? PHE B 521 ILE B 526 AA9 4 VAL B 89 ? ARG B 94 ? VAL B 466 ARG B 471 AA9 5 ASP B 103 ? ILE B 109 ? ASP B 480 ILE B 486 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 30 ? N VAL A 30 O MET A 167 ? O MET A 167 AA1 2 3 O PHE A 172 ? O PHE A 172 N LYS A 74 ? N LYS A 74 AA1 3 4 N CYS A 77 ? N CYS A 77 O SER A 124 ? O SER A 124 AA2 1 2 N SER A 45 ? N SER A 45 O ILE A 149 ? O ILE A 149 AA2 2 3 O SER A 150 ? O SER A 150 N CYS A 92 ? N CYS A 92 AA2 3 4 N LEU A 89 ? N LEU A 89 O TRP A 116 ? O TRP A 116 AA3 1 2 N SER A 96 ? N SER A 96 O THR B 173 ? O THR B 550 AA3 2 3 O ALA B 171 ? O ALA B 548 N TRP B 64 ? N TRP B 441 AA3 3 4 N GLN B 72 ? N GLN B 449 O ASN B 161 ? O ASN B 538 AA3 4 5 O LEU B 162 ? O LEU B 539 N SER B 12 ? N SER B 389 AA3 5 6 N ARG B 18 ? N ARG B 395 O GLN B 47 ? O GLN B 424 AA4 1 2 N TYR A 183 ? N TYR A 183 O VAL B 170 ? O VAL B 547 AA4 2 3 O ALA B 171 ? O ALA B 548 N TRP B 64 ? N TRP B 441 AA4 3 4 N GLY B 67 ? N GLY B 444 O VAL B 123 ? O VAL B 500 AA5 1 2 N LEU A 194 ? N LEU A 194 O THR A 349 ? O THR A 349 AA5 2 3 O ILE A 357 ? O ILE A 357 N TYR A 242 ? N TYR A 242 AA5 3 4 N VAL A 251 ? N VAL A 251 O ILE A 295 ? O ILE A 295 AA6 1 2 N LEU A 194 ? N LEU A 194 O THR A 349 ? O THR A 349 AA6 2 3 O ILE A 357 ? O ILE A 357 N TYR A 242 ? N TYR A 242 AA6 3 4 N PHE A 243 ? N PHE A 243 O TRP A 308 ? O TRP A 308 AA7 1 2 N LYS A 212 ? N LYS A 212 O ALA A 328 ? O ALA A 328 AA7 2 3 O MET A 329 ? O MET A 329 N THR A 264 ? N THR A 264 AA7 3 4 N VAL A 263 ? N VAL A 263 O VAL A 286 ? O VAL A 286 AA8 1 2 N ALA A 222 ? N ALA A 222 O LEU A 229 ? O LEU A 229 AA8 2 3 N ILE A 228 ? N ILE A 228 O PHE B 179 ? O PHE B 556 AA9 1 2 O GLY B 37 ? O GLY B 414 N ASP B 32 ? N ASP B 409 AA9 2 3 N LYS B 27 ? N LYS B 404 O ILE B 149 ? O ILE B 526 AA9 3 4 O GLU B 146 ? O GLU B 523 N PHE B 92 ? N PHE B 469 AA9 4 5 N VAL B 89 ? N VAL B 466 O ILE B 109 ? O ILE B 486 # _atom_sites.entry_id 6QCC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 TRP 116 116 116 TRP TRP A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 CYS 120 120 120 CYS CYS A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 CYS 133 133 133 CYS CYS A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 CYS 153 153 153 CYS CYS A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 TRP 157 157 157 TRP TRP A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 MET 167 167 167 MET MET A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 MET 169 169 169 MET MET A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 TYR 183 183 183 TYR TYR A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 TRP 193 193 193 TRP TRP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 TRP 197 197 197 TRP TRP A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 GLN 205 205 205 GLN GLN A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 ASN 209 209 209 ASN ASN A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 MET 214 214 214 MET MET A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 GLY 223 223 223 GLY GLY A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 MET 230 230 230 MET MET A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 MET 232 232 232 MET MET A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 TYR 236 236 236 TYR TYR A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 TRP 240 240 240 TRP TRP A . n A 1 241 ARG 241 241 241 ARG ARG A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 HIS 244 244 244 HIS HIS A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 VAL 248 248 248 VAL VAL A . n A 1 249 PHE 249 249 249 PHE PHE A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 LYS 253 253 253 LYS LYS A . n A 1 254 MET 254 254 254 MET MET A . n A 1 255 SER 255 255 255 SER SER A . n A 1 256 SER 256 256 256 SER SER A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 LYS 260 260 260 LYS LYS A . n A 1 261 SER 261 261 261 SER SER A . n A 1 262 THR 262 262 262 THR THR A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 PHE 265 265 265 PHE PHE A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 ILE 267 267 267 ILE ILE A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 PHE 269 269 269 PHE PHE A . n A 1 270 GLY 270 270 270 GLY GLY A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 SER 273 273 273 SER SER A . n A 1 274 PHE 274 274 274 PHE PHE A . n A 1 275 GLN 275 275 275 GLN GLN A . n A 1 276 PRO 276 276 276 PRO PRO A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 GLU 279 279 279 GLU GLU A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 PHE 281 281 281 PHE PHE A . n A 1 282 PRO 282 282 282 PRO PRO A . n A 1 283 ASN 283 283 283 ASN ASN A . n A 1 284 LYS 284 284 284 LYS LYS A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 GLN 287 287 287 GLN GLN A . n A 1 288 PHE 288 288 288 PHE PHE A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 GLU 290 290 290 GLU GLU A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 GLN 292 292 292 GLN GLN A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LYS 298 298 298 LYS LYS A . n A 1 299 PHE 299 299 299 PHE PHE A . n A 1 300 THR 300 300 300 THR THR A . n A 1 301 ARG 301 301 301 ARG ARG A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 GLU 303 303 303 GLU GLU A . n A 1 304 PHE 304 304 304 PHE PHE A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 THR 306 306 306 THR THR A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 TRP 308 308 308 TRP TRP A . n A 1 309 SER 309 309 309 SER SER A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 GLN 311 311 311 GLN GLN A . n A 1 312 VAL 312 312 312 VAL VAL A . n A 1 313 ASP 313 313 313 ASP ASP A . n A 1 314 PRO 314 314 314 PRO PRO A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 GLN 317 317 317 GLN GLN A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 ASN 320 320 320 ASN ASN A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 CYS 323 323 323 CYS CYS A . n A 1 324 PRO 324 324 324 PRO PRO A . n A 1 325 TYR 325 325 325 TYR TYR A . n A 1 326 LEU 326 326 326 LEU LEU A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ALA 328 328 328 ALA ALA A . n A 1 329 MET 329 329 329 MET MET A . n A 1 330 VAL 330 330 330 VAL VAL A . n A 1 331 HIS 331 331 331 HIS HIS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 SER 333 333 333 SER SER A . n A 1 334 THR 334 334 334 THR THR A . n A 1 335 ALA 335 335 335 ALA ALA A . n A 1 336 SER 336 336 336 SER SER A . n A 1 337 THR 337 337 337 THR THR A . n A 1 338 ILE 338 338 338 ILE ILE A . n A 1 339 VAL 339 339 339 VAL VAL A . n A 1 340 GLY 340 340 340 GLY GLY A . n A 1 341 ASP 341 341 341 ASP ASP A . n A 1 342 PHE 342 342 342 PHE PHE A . n A 1 343 ASN 343 343 343 ASN ASN A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 GLY 345 345 345 GLY GLY A . n A 1 346 VAL 346 346 346 VAL VAL A . n A 1 347 THR 347 347 347 THR THR A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 THR 349 349 349 THR THR A . n A 1 350 ARG 350 350 350 ARG ARG A . n A 1 351 ILE 351 351 351 ILE ILE A . n A 1 352 GLU 352 352 352 GLU GLU A . n A 1 353 ASN 353 353 353 ASN ASN A . n A 1 354 PHE 354 354 354 PHE PHE A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ILE 357 357 357 ILE ILE A . n A 1 358 GLY 358 358 358 GLY GLY A . n A 1 359 CYS 359 359 359 CYS CYS A . n A 1 360 ASN 360 360 360 ASN ASN A . n A 1 361 PRO 361 361 361 PRO PRO A . n A 1 362 GLY 362 362 362 GLY GLY A . n A 1 363 ILE 363 363 363 ILE ILE A . n A 1 364 GLN 364 364 364 GLN GLN A . n A 1 365 GLY 365 365 365 GLY GLY A . n A 1 366 ALA 366 366 366 ALA ALA A . n A 1 367 ARG 367 367 367 ARG ARG A . n A 1 368 LEU 368 368 368 LEU LEU A . n A 1 369 LEU 369 369 369 LEU LEU A . n A 1 370 GLY 370 370 370 GLY GLY A . n A 1 371 SER 371 371 ? ? ? A . n A 1 372 ALA 372 372 ? ? ? A . n A 1 373 ILE 373 373 ? ? ? A . n A 1 374 ALA 374 374 ? ? ? A . n A 1 375 THR 375 375 ? ? ? A . n A 1 376 PRO 376 376 ? ? ? A . n A 1 377 GLN 377 377 ? ? ? A . n B 2 1 ASN 1 378 378 ASN ASN B . n B 2 2 ALA 2 379 379 ALA ALA B . n B 2 3 VAL 3 380 380 VAL VAL B . n B 2 4 VAL 4 381 381 VAL VAL B . n B 2 5 ARG 5 382 382 ARG ARG B . n B 2 6 SER 6 383 383 SER SER B . n B 2 7 SER 7 384 384 SER SER B . n B 2 8 PRO 8 385 385 PRO PRO B . n B 2 9 GLY 9 386 386 GLY GLY B . n B 2 10 ILE 10 387 387 ILE ILE B . n B 2 11 TYR 11 388 388 TYR TYR B . n B 2 12 SER 12 389 389 SER SER B . n B 2 13 ASN 13 390 390 ASN ASN B . n B 2 14 CYS 14 391 391 CYS CYS B . n B 2 15 PHE 15 392 392 PHE PHE B . n B 2 16 SER 16 393 393 SER SER B . n B 2 17 LEU 17 394 394 LEU LEU B . n B 2 18 ARG 18 395 395 ARG ARG B . n B 2 19 ALA 19 396 396 ALA ALA B . n B 2 20 PRO 20 397 397 PRO PRO B . n B 2 21 LEU 21 398 398 LEU LEU B . n B 2 22 LYS 22 399 399 LYS LYS B . n B 2 23 PRO 23 400 400 PRO PRO B . n B 2 24 ASP 24 401 401 ASP ASP B . n B 2 25 GLY 25 402 402 GLY GLY B . n B 2 26 PRO 26 403 403 PRO PRO B . n B 2 27 LYS 27 404 404 LYS LYS B . n B 2 28 SER 28 405 405 SER SER B . n B 2 29 PHE 29 406 406 PHE PHE B . n B 2 30 THR 30 407 407 THR THR B . n B 2 31 CYS 31 408 408 CYS CYS B . n B 2 32 ASP 32 409 409 ASP ASP B . n B 2 33 LEU 33 410 410 LEU LEU B . n B 2 34 MET 34 411 411 MET MET B . n B 2 35 GLY 35 412 412 GLY GLY B . n B 2 36 GLY 36 413 413 GLY GLY B . n B 2 37 GLY 37 414 414 GLY GLY B . n B 2 38 VAL 38 415 415 VAL VAL B . n B 2 39 VAL 39 416 416 VAL VAL B . n B 2 40 THR 40 417 417 THR THR B . n B 2 41 ASP 41 418 418 ASP ASP B . n B 2 42 GLY 42 419 419 GLY GLY B . n B 2 43 ASP 43 420 420 ASP ASP B . n B 2 44 THR 44 421 421 THR THR B . n B 2 45 GLY 45 422 422 GLY GLY B . n B 2 46 TRP 46 423 423 TRP TRP B . n B 2 47 GLN 47 424 424 GLN GLN B . n B 2 48 VAL 48 425 425 VAL VAL B . n B 2 49 THR 49 426 426 THR THR B . n B 2 50 VAL 50 427 427 VAL VAL B . n B 2 51 ARG 51 428 428 ARG ARG B . n B 2 52 ASN 52 429 429 ASN ASN B . n B 2 53 THR 53 430 430 THR THR B . n B 2 54 PRO 54 431 431 PRO PRO B . n B 2 55 VAL 55 432 432 VAL VAL B . n B 2 56 SER 56 433 433 SER SER B . n B 2 57 ASN 57 434 434 ASN ASN B . n B 2 58 LEU 58 435 435 LEU LEU B . n B 2 59 LEU 59 436 436 LEU LEU B . n B 2 60 ARG 60 437 437 ARG ARG B . n B 2 61 THR 61 438 438 THR THR B . n B 2 62 ALA 62 439 439 ALA ALA B . n B 2 63 ALA 63 440 440 ALA ALA B . n B 2 64 TRP 64 441 441 TRP TRP B . n B 2 65 LYS 65 442 442 LYS LYS B . n B 2 66 ARG 66 443 443 ARG ARG B . n B 2 67 GLY 67 444 444 GLY GLY B . n B 2 68 THR 68 445 445 THR THR B . n B 2 69 VAL 69 446 446 VAL VAL B . n B 2 70 HIS 70 447 447 HIS HIS B . n B 2 71 VAL 71 448 448 VAL VAL B . n B 2 72 GLN 72 449 449 GLN GLN B . n B 2 73 VAL 73 450 450 VAL VAL B . n B 2 74 VAL 74 451 451 VAL VAL B . n B 2 75 LEU 75 452 452 LEU LEU B . n B 2 76 ALA 76 453 453 ALA ALA B . n B 2 77 GLY 77 454 454 GLY GLY B . n B 2 78 ALA 78 455 455 ALA ALA B . n B 2 79 SER 79 456 456 SER SER B . n B 2 80 VAL 80 457 457 VAL VAL B . n B 2 81 LYS 81 458 458 LYS LYS B . n B 2 82 ARG 82 459 459 ARG ARG B . n B 2 83 SER 83 460 460 SER SER B . n B 2 84 ASP 84 461 461 ASP ASP B . n B 2 85 TRP 85 462 462 TRP TRP B . n B 2 86 ASP 86 463 463 ASP ASP B . n B 2 87 SER 87 464 464 SER SER B . n B 2 88 THR 88 465 465 THR THR B . n B 2 89 VAL 89 466 466 VAL VAL B . n B 2 90 GLN 90 467 467 GLN GLN B . n B 2 91 ILE 91 468 468 ILE ILE B . n B 2 92 PHE 92 469 469 PHE PHE B . n B 2 93 LEU 93 470 470 LEU LEU B . n B 2 94 ARG 94 471 471 ARG ARG B . n B 2 95 GLN 95 472 472 GLN GLN B . n B 2 96 SER 96 473 473 SER SER B . n B 2 97 MET 97 474 474 MET MET B . n B 2 98 ALA 98 475 475 ALA ALA B . n B 2 99 THR 99 476 476 THR THR B . n B 2 100 SER 100 477 477 SER SER B . n B 2 101 SER 101 478 478 SER SER B . n B 2 102 TYR 102 479 479 TYR TYR B . n B 2 103 ASP 103 480 480 ASP ASP B . n B 2 104 ALA 104 481 481 ALA ALA B . n B 2 105 LYS 105 482 482 LYS LYS B . n B 2 106 ILE 106 483 483 ILE ILE B . n B 2 107 TRP 107 484 484 TRP TRP B . n B 2 108 ASP 108 485 485 ASP ASP B . n B 2 109 ILE 109 486 486 ILE ILE B . n B 2 110 CYS 110 487 487 CYS CYS B . n B 2 111 GLN 111 488 488 GLN GLN B . n B 2 112 PRO 112 489 489 PRO PRO B . n B 2 113 GLY 113 490 490 GLY GLY B . n B 2 114 ALA 114 491 491 ALA ALA B . n B 2 115 ALA 115 492 492 ALA ALA B . n B 2 116 MET 116 493 493 MET MET B . n B 2 117 LEU 117 494 494 LEU LEU B . n B 2 118 GLU 118 495 495 GLU GLU B . n B 2 119 PHE 119 496 496 PHE PHE B . n B 2 120 SER 120 497 497 SER SER B . n B 2 121 PHE 121 498 498 PHE PHE B . n B 2 122 ASP 122 499 499 ASP ASP B . n B 2 123 VAL 123 500 500 VAL VAL B . n B 2 124 VAL 124 501 501 VAL VAL B . n B 2 125 GLY 125 502 502 GLY GLY B . n B 2 126 PRO 126 503 503 PRO PRO B . n B 2 127 ASN 127 504 504 ASN ASN B . n B 2 128 SER 128 505 505 SER SER B . n B 2 129 GLY 129 506 506 GLY GLY B . n B 2 130 PHE 130 507 507 PHE PHE B . n B 2 131 GLU 131 508 508 GLU GLU B . n B 2 132 MET 132 509 509 MET MET B . n B 2 133 TRP 133 510 510 TRP TRP B . n B 2 134 ASP 134 511 511 ASP ASP B . n B 2 135 SER 135 512 512 SER SER B . n B 2 136 ASN 136 513 513 ASN ASN B . n B 2 137 TRP 137 514 514 TRP TRP B . n B 2 138 ALA 138 515 515 ALA ALA B . n B 2 139 SER 139 516 516 SER SER B . n B 2 140 GLN 140 517 517 GLN GLN B . n B 2 141 THR 141 518 518 THR THR B . n B 2 142 SER 142 519 519 SER SER B . n B 2 143 TRP 143 520 520 TRP TRP B . n B 2 144 PHE 144 521 521 PHE PHE B . n B 2 145 LEU 145 522 522 LEU LEU B . n B 2 146 GLU 146 523 523 GLU GLU B . n B 2 147 PHE 147 524 524 PHE PHE B . n B 2 148 LEU 148 525 525 LEU LEU B . n B 2 149 ILE 149 526 526 ILE ILE B . n B 2 150 SER 150 527 527 SER SER B . n B 2 151 ASN 151 528 528 ASN ASN B . n B 2 152 PRO 152 529 529 PRO PRO B . n B 2 153 ALA 153 530 530 ALA ALA B . n B 2 154 GLN 154 531 531 GLN GLN B . n B 2 155 ASN 155 532 532 ASN ASN B . n B 2 156 THR 156 533 533 THR THR B . n B 2 157 LEU 157 534 534 LEU LEU B . n B 2 158 PHE 158 535 535 PHE PHE B . n B 2 159 GLU 159 536 536 GLU GLU B . n B 2 160 VAL 160 537 537 VAL VAL B . n B 2 161 ASN 161 538 538 ASN ASN B . n B 2 162 LEU 162 539 539 LEU LEU B . n B 2 163 ARG 163 540 540 ARG ARG B . n B 2 164 LEU 164 541 541 LEU LEU B . n B 2 165 ASP 165 542 542 ASP ASP B . n B 2 166 GLU 166 543 543 GLU GLU B . n B 2 167 ASN 167 544 544 ASN ASN B . n B 2 168 PHE 168 545 545 PHE PHE B . n B 2 169 SER 169 546 546 SER SER B . n B 2 170 VAL 170 547 547 VAL VAL B . n B 2 171 ALA 171 548 548 ALA ALA B . n B 2 172 GLY 172 549 549 GLY GLY B . n B 2 173 THR 173 550 550 THR THR B . n B 2 174 THR 174 551 551 THR THR B . n B 2 175 LEU 175 552 552 LEU LEU B . n B 2 176 MET 176 553 553 MET MET B . n B 2 177 PRO 177 554 554 PRO PRO B . n B 2 178 PRO 178 555 555 PRO PRO B . n B 2 179 PHE 179 556 556 PHE PHE B . n B 2 180 VAL 180 557 557 VAL VAL B . n B 2 181 LEU 181 558 558 LEU LEU B . n B 2 182 ASP 182 559 559 ASP ASP B . n B 2 183 ARG 183 560 ? ? ? B . n B 2 184 VAL 184 561 ? ? ? B . n B 2 185 SER 185 562 ? ? ? B . n B 2 186 VAL 186 563 ? ? ? B . n B 2 187 ALA 187 564 ? ? ? B . n B 2 188 ARG 188 565 ? ? ? B . n B 2 189 PRO 189 566 ? ? ? B . n B 2 190 LEU 190 567 ? ? ? B . n B 2 191 LEU 191 568 ? ? ? B . n B 2 192 GLY 192 569 ? ? ? B . n B 2 193 LYS 193 570 ? ? ? B . n B 2 194 GLN 194 571 ? ? ? B . n B 2 195 THR 195 572 ? ? ? B . n B 2 196 LYS 196 573 ? ? ? B . n B 2 197 THR 197 574 ? ? ? B . n B 2 198 VAL 198 575 ? ? ? B . n B 2 199 ALA 199 576 ? ? ? B . n B 2 200 ARG 200 577 ? ? ? B . n B 2 201 SER 201 578 ? ? ? B . n B 2 202 ALA 202 579 ? ? ? B . n B 2 203 ARG 203 580 ? ? ? B . n B 2 204 VAL 204 581 ? ? ? B . n B 2 205 VAL 205 582 ? ? ? B . n B 2 206 ARG 206 583 ? ? ? B . n B 2 207 GLU 207 584 ? ? ? B . n B 2 208 THR 208 585 ? ? ? B . n B 2 209 LYS 209 586 ? ? ? B . n B 2 210 GLU 210 587 ? ? ? B . n B 2 211 ALA 211 588 ? ? ? B . n B 2 212 SER 212 589 ? ? ? B . n B 2 213 GLU 213 590 ? ? ? B . n B 2 214 SER 214 591 ? ? ? B . n B 2 215 PRO 215 592 ? ? ? B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 120-meric 120 2 'icosahedral asymmetric unit' ? dimeric 2 3 'icosahedral pentamer' ? decameric 10 4 'icosahedral 23 hexamer' ? dodecameric 12 5 'icosahedral asymmetric unit, std point frame' ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B 2 1 A,B 3 '(1-5)' A,B 4 '(1,2,6,10,23,24)' A,B 5 P A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.00000000 0.00000000 1.00000000 -277.50000 1.00000000 0.00000000 0.00000000 -277.50000 0.00000000 1.00000000 0.00000000 -277.50000 1 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50000000 0.30901699 0.80901699 -171.50443 0.30901699 0.80901699 -0.50000000 105.99557 -0.80901699 0.50000000 0.30901699 277.50000 3 'point symmetry operation' ? ? -0.30901699 0.80901699 0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 555.00000 4 'point symmetry operation' ? ? -0.30901699 0.80901699 -0.50000000 277.50000 0.80901699 0.50000000 0.30901699 -171.50443 0.50000000 -0.30901699 -0.80901699 449.00443 5 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901699 277.50000 0.30901699 0.80901699 0.50000000 -171.50443 0.80901699 -0.50000000 0.30901699 105.99557 6 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 555.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 555.00000 7 'point symmetry operation' ? ? -0.50000000 -0.30901699 -0.80901699 726.50443 0.30901699 0.80901699 -0.50000000 105.99557 0.80901699 -0.50000000 -0.30901699 277.50000 8 'point symmetry operation' ? ? 0.30901699 -0.80901699 -0.50000000 555.00000 0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 9 'point symmetry operation' ? ? 0.30901699 -0.80901699 0.50000000 277.50000 0.80901699 0.50000000 0.30901699 -171.50443 -0.50000000 0.30901699 0.80901699 105.99557 10 'point symmetry operation' ? ? -0.50000000 -0.30901699 0.80901699 277.50000 0.30901699 0.80901699 0.50000000 -171.50443 -0.80901699 0.50000000 -0.30901699 449.00443 11 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 555.00000 0.00000000 0.00000000 -1.00000000 555.00000 12 'point symmetry operation' ? ? 0.50000000 0.30901699 0.80901699 -171.50443 -0.30901699 -0.80901699 0.50000000 449.00443 0.80901699 -0.50000000 -0.30901699 277.50000 13 'point symmetry operation' ? ? -0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 555.00000 0.50000000 -0.30901699 0.80901699 0.00000 14 'point symmetry operation' ? ? -0.30901699 0.80901699 -0.50000000 277.50000 -0.80901699 -0.50000000 -0.30901699 726.50443 -0.50000000 0.30901699 0.80901699 105.99557 15 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901699 277.50000 -0.30901699 -0.80901699 -0.50000000 726.50443 -0.80901699 0.50000000 -0.30901699 449.00443 16 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 555.00000 0.00000000 -1.00000000 0.00000000 555.00000 0.00000000 0.00000000 1.00000000 0.00000 17 'point symmetry operation' ? ? -0.50000000 -0.30901699 -0.80901699 726.50443 -0.30901699 -0.80901699 0.50000000 449.00443 -0.80901699 0.50000000 0.30901699 277.50000 18 'point symmetry operation' ? ? 0.30901699 -0.80901699 -0.50000000 555.00000 -0.80901699 -0.50000000 0.30901699 555.00000 -0.50000000 0.30901699 -0.80901699 555.00000 19 'point symmetry operation' ? ? 0.30901699 -0.80901699 0.50000000 277.50000 -0.80901699 -0.50000000 -0.30901699 726.50443 0.50000000 -0.30901699 -0.80901699 449.00443 20 'point symmetry operation' ? ? -0.50000000 -0.30901699 0.80901699 277.50000 -0.30901699 -0.80901699 -0.50000000 726.50443 0.80901699 -0.50000000 0.30901699 105.99557 21 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 22 'point symmetry operation' ? ? -0.80901699 0.50000000 0.30901699 277.50000 0.50000000 0.30901699 0.80901699 -171.50443 0.30901699 0.80901699 -0.50000000 105.99557 23 'point symmetry operation' ? ? -0.50000000 0.30901699 -0.80901699 555.00000 -0.30901699 0.80901699 0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 24 'point symmetry operation' ? ? 0.50000000 -0.30901699 -0.80901699 449.00443 -0.30901699 0.80901699 -0.50000000 277.50000 0.80901699 0.50000000 0.30901699 -171.50443 25 'point symmetry operation' ? ? 0.80901699 -0.50000000 0.30901699 105.99557 0.50000000 0.30901699 -0.80901699 277.50000 0.30901699 0.80901699 0.50000000 -171.50443 26 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 555.00000 -1.00000000 0.00000000 0.00000000 555.00000 0.00000000 1.00000000 0.00000000 0.00000 27 'point symmetry operation' ? ? 0.80901699 -0.50000000 -0.30901699 277.50000 -0.50000000 -0.30901699 -0.80901699 726.50443 0.30901699 0.80901699 -0.50000000 105.99557 28 'point symmetry operation' ? ? 0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 555.00000 0.80901699 0.50000000 -0.30901699 0.00000 29 'point symmetry operation' ? ? -0.50000000 0.30901699 0.80901699 105.99557 0.30901699 -0.80901699 0.50000000 277.50000 0.80901699 0.50000000 0.30901699 -171.50443 30 'point symmetry operation' ? ? -0.80901699 0.50000000 -0.30901699 449.00443 -0.50000000 -0.30901699 0.80901699 277.50000 0.30901699 0.80901699 0.50000000 -171.50443 31 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 555.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 555.00000 32 'point symmetry operation' ? ? 0.80901699 -0.50000000 -0.30901699 277.50000 0.50000000 0.30901699 0.80901699 -171.50443 -0.30901699 -0.80901699 0.50000000 449.00443 33 'point symmetry operation' ? ? 0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 555.00000 34 'point symmetry operation' ? ? -0.50000000 0.30901699 0.80901699 105.99557 -0.30901699 0.80901699 -0.50000000 277.50000 -0.80901699 -0.50000000 -0.30901699 726.50443 35 'point symmetry operation' ? ? -0.80901699 0.50000000 -0.30901699 449.00443 0.50000000 0.30901699 -0.80901699 277.50000 -0.30901699 -0.80901699 -0.50000000 726.50443 36 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 555.00000 0.00000000 -1.00000000 0.00000000 555.00000 37 'point symmetry operation' ? ? -0.80901699 0.50000000 0.30901699 277.50000 -0.50000000 -0.30901699 -0.80901699 726.50443 -0.30901699 -0.80901699 0.50000000 449.00443 38 'point symmetry operation' ? ? -0.50000000 0.30901699 -0.80901699 555.00000 0.30901699 -0.80901699 -0.50000000 555.00000 -0.80901699 -0.50000000 0.30901699 555.00000 39 'point symmetry operation' ? ? 0.50000000 -0.30901699 -0.80901699 449.00443 0.30901699 -0.80901699 0.50000000 277.50000 -0.80901699 -0.50000000 -0.30901699 726.50443 40 'point symmetry operation' ? ? 0.80901699 -0.50000000 0.30901699 105.99557 -0.50000000 -0.30901699 0.80901699 277.50000 -0.30901699 -0.80901699 -0.50000000 726.50443 41 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 42 'point symmetry operation' ? ? 0.30901699 0.80901699 -0.50000000 105.99557 -0.80901699 0.50000000 0.30901699 277.50000 0.50000000 0.30901699 0.80901699 -171.50443 43 'point symmetry operation' ? ? 0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 555.00000 -0.30901699 0.80901699 0.50000000 0.00000 44 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901699 -171.50443 0.50000000 -0.30901699 -0.80901699 449.00443 -0.30901699 0.80901699 -0.50000000 277.50000 45 'point symmetry operation' ? ? 0.30901699 0.80901699 0.50000000 -171.50443 0.80901699 -0.50000000 0.30901699 105.99557 0.50000000 0.30901699 -0.80901699 277.50000 46 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 555.00000 -1.00000000 0.00000000 0.00000000 555.00000 47 'point symmetry operation' ? ? 0.30901699 0.80901699 -0.50000000 105.99557 0.80901699 -0.50000000 -0.30901699 277.50000 -0.50000000 -0.30901699 -0.80901699 726.50443 48 'point symmetry operation' ? ? 0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 555.00000 49 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901699 -171.50443 -0.50000000 0.30901699 0.80901699 105.99557 0.30901699 -0.80901699 0.50000000 277.50000 50 'point symmetry operation' ? ? 0.30901699 0.80901699 0.50000000 -171.50443 -0.80901699 0.50000000 -0.30901699 449.00443 -0.50000000 -0.30901699 0.80901699 277.50000 51 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 555.00000 0.00000000 0.00000000 -1.00000000 555.00000 1.00000000 0.00000000 0.00000000 0.00000 52 'point symmetry operation' ? ? -0.30901699 -0.80901699 0.50000000 449.00443 0.80901699 -0.50000000 -0.30901699 277.50000 0.50000000 0.30901699 0.80901699 -171.50443 53 'point symmetry operation' ? ? -0.80901699 -0.50000000 0.30901699 555.00000 0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 54 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901699 726.50443 -0.50000000 0.30901699 0.80901699 105.99557 -0.30901699 0.80901699 -0.50000000 277.50000 55 'point symmetry operation' ? ? -0.30901699 -0.80901699 -0.50000000 726.50443 -0.80901699 0.50000000 -0.30901699 449.00443 0.50000000 0.30901699 -0.80901699 277.50000 56 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 555.00000 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 555.00000 57 'point symmetry operation' ? ? -0.30901699 -0.80901699 0.50000000 449.00443 -0.80901699 0.50000000 0.30901699 277.50000 -0.50000000 -0.30901699 -0.80901699 726.50443 58 'point symmetry operation' ? ? -0.80901699 -0.50000000 0.30901699 555.00000 -0.50000000 0.30901699 -0.80901699 555.00000 0.30901699 -0.80901699 -0.50000000 555.00000 59 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901699 726.50443 0.50000000 -0.30901699 -0.80901699 449.00443 0.30901699 -0.80901699 0.50000000 277.50000 60 'point symmetry operation' ? ? -0.30901699 -0.80901699 -0.50000000 726.50443 0.80901699 -0.50000000 0.30901699 105.99557 -0.50000000 -0.30901699 0.80901699 277.50000 # _pdbx_point_symmetry.entry_id 6QCC _pdbx_point_symmetry.Schoenflies_symbol I # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _em_3d_fitting.entry_id 6QCC _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 1NY7 # _em_3d_reconstruction.entry_id 6QCC _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 17233 _em_3d_reconstruction.resolution 3.22 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Broad bean stain virus' _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list '1, 2' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6QCC _em_image_scans.id 1 _em_image_scans.dimension_height 2048 _em_image_scans.dimension_width 2048 _em_image_scans.frames_per_image 35 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size 14 _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 3-9 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6QCC _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification 59000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty NO _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate STRAIN _em_virus_entity.virus_type VIRION _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 298.15 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'blot for 1 second before plunging' _em_vitrification.humidity 99 _em_vitrification.instrument 'GATAN CRYOPLUNGE 3' _em_vitrification.entry_id 6QCC _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6QCC _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6QCC _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 9 ? ? -93.81 57.89 2 1 THR A 13 ? ? -98.16 31.33 3 1 ASN A 175 ? ? -91.46 51.34 4 1 LYS A 225 ? ? -68.33 98.04 5 1 GLU A 277 ? ? -92.38 50.09 6 1 ASN A 320 ? ? -98.41 32.12 7 1 ALA B 440 ? ? -93.18 -60.31 8 1 SER B 505 ? ? -142.58 40.66 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 371 ? A SER 371 2 1 Y 1 A ALA 372 ? A ALA 372 3 1 Y 1 A ILE 373 ? A ILE 373 4 1 Y 1 A ALA 374 ? A ALA 374 5 1 Y 1 A THR 375 ? A THR 375 6 1 Y 1 A PRO 376 ? A PRO 376 7 1 Y 1 A GLN 377 ? A GLN 377 8 1 Y 1 B ARG 560 ? B ARG 183 9 1 Y 1 B VAL 561 ? B VAL 184 10 1 Y 1 B SER 562 ? B SER 185 11 1 Y 1 B VAL 563 ? B VAL 186 12 1 Y 1 B ALA 564 ? B ALA 187 13 1 Y 1 B ARG 565 ? B ARG 188 14 1 Y 1 B PRO 566 ? B PRO 189 15 1 Y 1 B LEU 567 ? B LEU 190 16 1 Y 1 B LEU 568 ? B LEU 191 17 1 Y 1 B GLY 569 ? B GLY 192 18 1 Y 1 B LYS 570 ? B LYS 193 19 1 Y 1 B GLN 571 ? B GLN 194 20 1 Y 1 B THR 572 ? B THR 195 21 1 Y 1 B LYS 573 ? B LYS 196 22 1 Y 1 B THR 574 ? B THR 197 23 1 Y 1 B VAL 575 ? B VAL 198 24 1 Y 1 B ALA 576 ? B ALA 199 25 1 Y 1 B ARG 577 ? B ARG 200 26 1 Y 1 B SER 578 ? B SER 201 27 1 Y 1 B ALA 579 ? B ALA 202 28 1 Y 1 B ARG 580 ? B ARG 203 29 1 Y 1 B VAL 581 ? B VAL 204 30 1 Y 1 B VAL 582 ? B VAL 205 31 1 Y 1 B ARG 583 ? B ARG 206 32 1 Y 1 B GLU 584 ? B GLU 207 33 1 Y 1 B THR 585 ? B THR 208 34 1 Y 1 B LYS 586 ? B LYS 209 35 1 Y 1 B GLU 587 ? B GLU 210 36 1 Y 1 B ALA 588 ? B ALA 211 37 1 Y 1 B SER 589 ? B SER 212 38 1 Y 1 B GLU 590 ? B GLU 213 39 1 Y 1 B SER 591 ? B SER 214 40 1 Y 1 B PRO 592 ? B PRO 215 # _em_buffer_component.buffer_id 1 _em_buffer_component.id 1 _em_buffer_component.concentration 20 _em_buffer_component.concentration_units mM _em_buffer_component.formula K2HPO4/KH2PO4 _em_buffer_component.name Phosphate # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 593572 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Broad bean stain virus' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 45 _em_image_recording.average_exposure_time 2 _em_image_recording.details '1494 images were retained for 3D reconstruction' _em_image_recording.detector_mode INTEGRATING _em_image_recording.film_or_detector_model 'FEI FALCON II (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 2899 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 35663 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? Gautomatch 0.53 1 ? ? 2 'IMAGE ACQUISITION' ? EPU ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' 'CTF calculation' Gctf 1.06 1 ? ? 5 'CTF CORRECTION' 'CTF correction' RELION 3.0-beta-2 1 ? ? 6 'LAYERLINE INDEXING' ? ? ? ? ? ? 7 'DIFFRACTION INDEXING' ? ? ? ? ? ? 8 'MODEL FITTING' 'Program by Jorge Navaza' SUPER ? ? 1 ? 9 'MODEL FITTING' ? Coot 0.8.3 ? 1 ? 10 OTHER ? ? ? ? ? ? 11 'INITIAL EULER ASSIGNMENT' ? RELION 3.0-beta-2 1 ? ? 12 'FINAL EULER ASSIGNMENT' ? RELION 3.0-beta-2 1 ? ? 13 CLASSIFICATION ? RELION 3.0-beta-2 1 ? ? 14 RECONSTRUCTION ? RELION 3.0-beta-2 1 ? ? 15 'MODEL REFINEMENT' ? PHENIX 1.14-3260 ? 1 ? 16 'MODEL REFINEMENT' ? Coot 0.8.9.1 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 3906 _em_virus_natural_host.organism 'Vicia faba' _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter 300 _em_virus_shell.name capsid _em_virus_shell.triangulation 1 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Government of New Caledonia' 'New Caledonia' ? 1 'French Infrastructure for Integrated Structural Biology' France ANR-10-INBS-05 2 'France BioImaging (FBI)' France ANR-10-INBS-04-01 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details CryoEM #