HEADER TRANSFERASE 09-JAN-19 6QF4 TITLE X-RAY STRUCTURE OF HUMAN SERINE/THREONINE KINASE 17B (STK17B) AKA TITLE 2 DRAK2 IN COMPLEX WITH ADP OBTAINED BY ON-CHIP SOAKING COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 17B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DAP KINASE-RELATED APOPTOSIS-INDUCING PROTEIN KINASE 2; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STK17B, DRAK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STK17B, DRAK2, ADP, ON-CHIP LIGAND SOAKING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LIESKE,M.CERV,S.KREIDA,M.BARTHELMESS,P.FISCHER,T.PAKENDORF, AUTHOR 2 O.YEFANOV,V.MARIANI,T.SEINE,B.H.ROSS,E.CROSAS,O.LORBEER,A.BURKHARDT, AUTHOR 3 T.J.LANE,S.GUENTHER,J.BERGTHOLDT,S.SCHOEN,S.TORNROTH-HORSEFIELD, AUTHOR 4 H.N.CHAPMAN,A.MEENTS REVDAT 4 24-JAN-24 6QF4 1 REMARK REVDAT 3 30-MAR-22 6QF4 1 LINK REVDAT 2 31-JUL-19 6QF4 1 JRNL REVDAT 1 10-JUL-19 6QF4 0 JRNL AUTH J.LIESKE,M.CERV,S.KREIDA,D.KOMADINA,J.FISCHER,M.BARTHELMESS, JRNL AUTH 2 P.FISCHER,T.PAKENDORF,O.YEFANOV,V.MARIANI,T.SEINE,B.H.ROSS, JRNL AUTH 3 E.CROSAS,O.LORBEER,A.BURKHARDT,T.J.LANE,S.GUENTHER, JRNL AUTH 4 J.BERGTHOLDT,S.SCHOEN,S.TORNROTH-HORSEFIELD,H.N.CHAPMAN, JRNL AUTH 5 A.MEENTS JRNL TITL ON-CHIP CRYSTALLIZATION FOR SERIAL CRYSTALLOGRAPHY JRNL TITL 2 EXPERIMENTS AND ON-CHIP LIGAND-BINDING STUDIES. JRNL REF IUCRJ V. 6 714 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31316815 JRNL DOI 10.1107/S2052252519007395 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1-2155_9999 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 15521 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7457 - 5.5458 0.95 1359 152 0.1789 0.2007 REMARK 3 2 5.5458 - 4.4033 0.97 1282 142 0.1415 0.1480 REMARK 3 3 4.4033 - 3.8471 0.97 1267 140 0.1441 0.1957 REMARK 3 4 3.8471 - 3.4956 0.98 1278 143 0.1761 0.2517 REMARK 3 5 3.4956 - 3.2451 0.98 1252 138 0.2003 0.2619 REMARK 3 6 3.2451 - 3.0538 0.99 1262 141 0.2070 0.2756 REMARK 3 7 3.0538 - 2.9009 0.98 1263 141 0.2103 0.2576 REMARK 3 8 2.9009 - 2.7747 0.98 1234 137 0.2274 0.3236 REMARK 3 9 2.7747 - 2.6679 0.99 1258 138 0.2292 0.2949 REMARK 3 10 2.6679 - 2.5758 0.99 1258 141 0.2412 0.3052 REMARK 3 11 2.5758 - 2.4953 0.99 1256 139 0.2386 0.2594 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2425 REMARK 3 ANGLE : 0.476 3299 REMARK 3 CHIRALITY : 0.043 371 REMARK 3 PLANARITY : 0.002 422 REMARK 3 DIHEDRAL : 11.772 1455 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2042 73.7811 -2.2013 REMARK 3 T TENSOR REMARK 3 T11: 0.3370 T22: 0.4300 REMARK 3 T33: 0.4410 T12: 0.0916 REMARK 3 T13: -0.1023 T23: -0.0679 REMARK 3 L TENSOR REMARK 3 L11: 4.5706 L22: 6.1806 REMARK 3 L33: 7.4493 L12: 4.7290 REMARK 3 L13: -4.3644 L23: -2.4593 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: 0.0105 S13: -0.8539 REMARK 3 S21: -0.4872 S22: -0.1668 S23: -0.4049 REMARK 3 S31: 0.6862 S32: 0.5944 S33: 0.2447 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4916 84.4754 -2.1836 REMARK 3 T TENSOR REMARK 3 T11: 0.2524 T22: 0.2711 REMARK 3 T33: 0.3079 T12: 0.0423 REMARK 3 T13: -0.0329 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 4.7674 L22: 5.1910 REMARK 3 L33: 3.5879 L12: 2.2543 REMARK 3 L13: -0.4290 L23: -0.2065 REMARK 3 S TENSOR REMARK 3 S11: -0.3097 S12: 0.3883 S13: 0.2655 REMARK 3 S21: -0.2519 S22: 0.2839 S23: -0.0546 REMARK 3 S31: 0.0044 S32: -0.2176 S33: 0.0485 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1989 84.4541 4.1156 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.3246 REMARK 3 T33: 0.2949 T12: -0.0120 REMARK 3 T13: -0.0435 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 3.6220 L22: 6.0665 REMARK 3 L33: 3.8034 L12: -3.6124 REMARK 3 L13: -3.2988 L23: 2.8252 REMARK 3 S TENSOR REMARK 3 S11: -0.0895 S12: -0.1726 S13: 0.1020 REMARK 3 S21: 0.5162 S22: 0.2995 S23: -0.3580 REMARK 3 S31: 0.3078 S32: 0.1701 S33: -0.2107 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8211 93.5108 8.5197 REMARK 3 T TENSOR REMARK 3 T11: 0.2397 T22: 0.6173 REMARK 3 T33: 0.7415 T12: -0.0030 REMARK 3 T13: 0.0424 T23: -0.1649 REMARK 3 L TENSOR REMARK 3 L11: 0.0259 L22: 5.7090 REMARK 3 L33: 5.8103 L12: 0.2528 REMARK 3 L13: 0.1742 L23: -1.7506 REMARK 3 S TENSOR REMARK 3 S11: 0.2389 S12: -0.2587 S13: -0.2156 REMARK 3 S21: -0.4419 S22: -0.0868 S23: 1.9236 REMARK 3 S31: -0.0940 S32: -0.9984 S33: 0.0721 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8181 98.5823 12.0501 REMARK 3 T TENSOR REMARK 3 T11: 0.1902 T22: 0.1939 REMARK 3 T33: 0.3346 T12: 0.0596 REMARK 3 T13: -0.0410 T23: -0.0480 REMARK 3 L TENSOR REMARK 3 L11: 5.0899 L22: 4.0651 REMARK 3 L33: 6.1035 L12: 0.0207 REMARK 3 L13: -2.6705 L23: 0.0405 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: -0.1616 S13: -0.0530 REMARK 3 S21: 0.1321 S22: -0.0059 S23: -0.1559 REMARK 3 S31: 0.3493 S32: 0.0665 S33: 0.0551 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1998 100.9007 -0.0247 REMARK 3 T TENSOR REMARK 3 T11: 0.6670 T22: 0.5299 REMARK 3 T33: 0.3813 T12: -0.0172 REMARK 3 T13: 0.1774 T23: -0.1324 REMARK 3 L TENSOR REMARK 3 L11: 8.9019 L22: 5.3626 REMARK 3 L33: 7.6260 L12: 1.4175 REMARK 3 L13: -1.3730 L23: -1.7237 REMARK 3 S TENSOR REMARK 3 S11: 0.3493 S12: 0.6434 S13: 0.1462 REMARK 3 S21: -0.7134 S22: 0.2687 S23: -0.3071 REMARK 3 S31: -1.0396 S32: 1.0438 S33: -0.7903 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8888 110.4675 -3.9849 REMARK 3 T TENSOR REMARK 3 T11: 0.4635 T22: 0.5254 REMARK 3 T33: 0.3747 T12: -0.0260 REMARK 3 T13: 0.0919 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 5.0582 L22: 7.2574 REMARK 3 L33: 8.2449 L12: -0.1392 REMARK 3 L13: 3.4320 L23: -3.2283 REMARK 3 S TENSOR REMARK 3 S11: -0.3265 S12: 0.9916 S13: 0.4178 REMARK 3 S21: -0.8329 S22: 0.0753 S23: 0.0480 REMARK 3 S31: -0.4768 S32: 0.6868 S33: 0.1940 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7782 112.5975 4.3029 REMARK 3 T TENSOR REMARK 3 T11: 0.2930 T22: 0.3045 REMARK 3 T33: 0.3967 T12: 0.0902 REMARK 3 T13: 0.0255 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 2.8816 L22: 2.3577 REMARK 3 L33: 4.3045 L12: 1.0880 REMARK 3 L13: -0.7646 L23: -0.3754 REMARK 3 S TENSOR REMARK 3 S11: 0.1608 S12: 0.2115 S13: 0.3723 REMARK 3 S21: -0.1576 S22: 0.1085 S23: 0.1732 REMARK 3 S31: -0.3910 S32: -0.2832 S33: -0.2588 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8659 107.0782 30.5945 REMARK 3 T TENSOR REMARK 3 T11: 0.4517 T22: 0.5817 REMARK 3 T33: 0.4816 T12: -0.0198 REMARK 3 T13: -0.0048 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.5203 L22: 2.9942 REMARK 3 L33: 2.4944 L12: -0.9347 REMARK 3 L13: -1.0258 L23: -0.4467 REMARK 3 S TENSOR REMARK 3 S11: -0.0788 S12: -0.9124 S13: -0.0490 REMARK 3 S21: 0.6136 S22: -0.0598 S23: -0.1004 REMARK 3 S31: 0.0054 S32: 0.5795 S33: 0.0400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QF4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15529 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.495 REMARK 200 RESOLUTION RANGE LOW (A) : 42.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LM5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 20% PEG 3350, REMARK 280 50MM SODIUM/POTASSIUM TARTRATE, 0.8MM QUERCETIN, PH 7.5, BATCH REMARK 280 MODE, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.03650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.51825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.55475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.03650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 88.55475 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 29.51825 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 VAL A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 THR A 17 REMARK 465 GLU A 191 REMARK 465 LEU A 192 REMARK 465 ARG A 193 REMARK 465 GLU A 194 REMARK 465 SER A 309 REMARK 465 SER A 310 REMARK 465 SER A 311 REMARK 465 GLN A 312 REMARK 465 THR A 313 REMARK 465 GLN A 314 REMARK 465 ASP A 315 REMARK 465 HIS A 316 REMARK 465 SER A 317 REMARK 465 VAL A 318 REMARK 465 ARG A 319 REMARK 465 SER A 320 REMARK 465 SER A 321 REMARK 465 GLU A 322 REMARK 465 ASP A 323 REMARK 465 LYS A 324 REMARK 465 THR A 325 REMARK 465 SER A 326 REMARK 465 LYS A 327 REMARK 465 SER A 328 REMARK 465 SER A 329 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 129 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 158 43.40 -157.35 REMARK 500 ASP A 179 88.16 64.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 163 OD1 REMARK 620 2 ASP A 179 OD2 96.1 REMARK 620 3 ADP A 405 O3B 158.9 95.7 REMARK 620 4 ADP A 405 O1A 83.8 87.5 79.3 REMARK 620 5 HOH A 547 O 78.7 167.0 86.0 80.2 REMARK 620 6 HOH A 586 O 91.7 109.9 100.6 162.5 82.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6QF1 RELATED DB: PDB REMARK 900 ON-CHIP CRYSTALLIZED PROTEINASE K REMARK 900 RELATED ID: 6QF2 RELATED DB: PDB REMARK 900 ON-CHIP CRYSTALLIZED THERMOLYSIN REMARK 900 RELATED ID: 6QF3 RELATED DB: PDB REMARK 900 THERMOLYSIN SOAKED ON THE CHIP WITH ASPARTATE DBREF 6QF4 A 25 329 UNP O94768 ST17B_HUMAN 25 329 SEQADV 6QF4 MET A 3 UNP O94768 INITIATING METHIONINE SEQADV 6QF4 HIS A 4 UNP O94768 EXPRESSION TAG SEQADV 6QF4 HIS A 5 UNP O94768 EXPRESSION TAG SEQADV 6QF4 HIS A 6 UNP O94768 EXPRESSION TAG SEQADV 6QF4 HIS A 7 UNP O94768 EXPRESSION TAG SEQADV 6QF4 HIS A 8 UNP O94768 EXPRESSION TAG SEQADV 6QF4 HIS A 9 UNP O94768 EXPRESSION TAG SEQADV 6QF4 SER A 10 UNP O94768 LINKER SEQADV 6QF4 SER A 11 UNP O94768 LINKER SEQADV 6QF4 GLY A 12 UNP O94768 LINKER SEQADV 6QF4 VAL A 13 UNP O94768 LINKER SEQADV 6QF4 ASP A 14 UNP O94768 LINKER SEQADV 6QF4 LEU A 15 UNP O94768 LINKER SEQADV 6QF4 GLY A 16 UNP O94768 LINKER SEQADV 6QF4 THR A 17 UNP O94768 LINKER SEQADV 6QF4 GLU A 18 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 ASN A 19 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 LEU A 20 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 TYR A 21 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 PHE A 22 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 GLN A 23 UNP O94768 CLONING ARTIFACT SEQADV 6QF4 SER A 24 UNP O94768 CLONING ARTIFACT SEQRES 1 A 327 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 327 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU ASN PHE SEQRES 3 A 327 ASN ASN PHE TYR ILE LEU THR SER LYS GLU LEU GLY ARG SEQRES 4 A 327 GLY LYS PHE ALA VAL VAL ARG GLN CYS ILE SER LYS SER SEQRES 5 A 327 THR GLY GLN GLU TYR ALA ALA LYS PHE LEU LYS LYS ARG SEQRES 6 A 327 ARG ARG GLY GLN ASP CYS ARG ALA GLU ILE LEU HIS GLU SEQRES 7 A 327 ILE ALA VAL LEU GLU LEU ALA LYS SER CYS PRO ARG VAL SEQRES 8 A 327 ILE ASN LEU HIS GLU VAL TYR GLU ASN THR SER GLU ILE SEQRES 9 A 327 ILE LEU ILE LEU GLU TYR ALA ALA GLY GLY GLU ILE PHE SEQRES 10 A 327 SER LEU CYS LEU PRO GLU LEU ALA GLU MET VAL SER GLU SEQRES 11 A 327 ASN ASP VAL ILE ARG LEU ILE LYS GLN ILE LEU GLU GLY SEQRES 12 A 327 VAL TYR TYR LEU HIS GLN ASN ASN ILE VAL HIS LEU ASP SEQRES 13 A 327 LEU LYS PRO GLN ASN ILE LEU LEU SER SER ILE TYR PRO SEQRES 14 A 327 LEU GLY ASP ILE LYS ILE VAL ASP PHE GLY MET SER ARG SEQRES 15 A 327 LYS ILE GLY HIS ALA CYS GLU LEU ARG GLU ILE MET GLY SEQRES 16 A 327 THR PRO GLU TYR LEU ALA PRO GLU ILE LEU ASN TYR ASP SEQRES 17 A 327 PRO ILE THR THR ALA THR ASP MET TRP ASN ILE GLY ILE SEQRES 18 A 327 ILE ALA TYR MET LEU LEU THR HIS THR SER PRO PHE VAL SEQRES 19 A 327 GLY GLU ASP ASN GLN GLU THR TYR LEU ASN ILE SER GLN SEQRES 20 A 327 VAL ASN VAL ASP TYR SER GLU GLU THR PHE SER SER VAL SEQRES 21 A 327 SER GLN LEU ALA THR ASP PHE ILE GLN SER LEU LEU VAL SEQRES 22 A 327 LYS ASN PRO GLU LYS ARG PRO THR ALA GLU ILE CYS LEU SEQRES 23 A 327 SER HIS SER TRP LEU GLN GLN TRP ASP PHE GLU ASN LEU SEQRES 24 A 327 PHE HIS PRO GLU GLU THR SER SER SER SER GLN THR GLN SEQRES 25 A 327 ASP HIS SER VAL ARG SER SER GLU ASP LYS THR SER LYS SEQRES 26 A 327 SER SER HET MG A 401 1 HET CL A 402 1 HET EDO A 403 10 HET ACT A 404 7 HET ADP A 405 39 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 CL CL 1- FORMUL 4 EDO C2 H6 O2 FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 ADP C10 H15 N5 O10 P2 FORMUL 7 HOH *122(H2 O) HELIX 1 AA1 SER A 24 PHE A 31 1 8 HELIX 2 AA2 CYS A 73 ALA A 87 1 15 HELIX 3 AA3 PHE A 119 LEU A 123 5 5 HELIX 4 AA4 LEU A 126 VAL A 130 5 5 HELIX 5 AA5 SER A 131 GLN A 151 1 21 HELIX 6 AA6 LYS A 160 GLN A 162 5 3 HELIX 7 AA7 THR A 198 LEU A 202 5 5 HELIX 8 AA8 ALA A 203 ASN A 208 1 6 HELIX 9 AA9 THR A 214 HIS A 231 1 18 HELIX 10 AB1 ASP A 239 VAL A 250 1 12 HELIX 11 AB2 SER A 255 SER A 260 1 6 HELIX 12 AB3 SER A 263 LEU A 274 1 12 HELIX 13 AB4 ASN A 277 ARG A 281 5 5 HELIX 14 AB5 THR A 283 LEU A 288 1 6 HELIX 15 AB6 SER A 289 GLN A 294 5 6 SHEET 1 AA1 5 TYR A 32 ARG A 41 0 SHEET 2 AA1 5 ALA A 45 SER A 52 -1 O VAL A 47 N GLY A 40 SHEET 3 AA1 5 GLU A 58 LYS A 65 -1 O PHE A 63 N VAL A 46 SHEET 4 AA1 5 GLU A 105 LEU A 110 -1 O LEU A 110 N ALA A 60 SHEET 5 AA1 5 LEU A 96 GLU A 101 -1 N TYR A 100 O ILE A 107 SHEET 1 AA2 2 ARG A 67 ARG A 68 0 SHEET 2 AA2 2 GLN A 71 ASP A 72 -1 O GLN A 71 N ARG A 68 SHEET 1 AA3 3 GLY A 116 GLU A 117 0 SHEET 2 AA3 3 ILE A 164 LEU A 166 -1 O LEU A 166 N GLY A 116 SHEET 3 AA3 3 ILE A 175 ILE A 177 -1 O LYS A 176 N LEU A 165 LINK OD1 ASN A 163 MG MG A 401 1555 1555 2.29 LINK OD2 ASP A 179 MG MG A 401 1555 1555 1.92 LINK MG MG A 401 O3B ADP A 405 1555 1555 2.14 LINK MG MG A 401 O1A ADP A 405 1555 1555 2.14 LINK MG MG A 401 O HOH A 547 1555 1555 2.23 LINK MG MG A 401 O HOH A 586 1555 1555 2.24 CISPEP 1 TYR A 170 PRO A 171 0 -0.61 SITE 1 AC1 5 ASN A 163 ASP A 179 ADP A 405 HOH A 547 SITE 2 AC1 5 HOH A 586 SITE 1 AC2 1 GLU A 132 SITE 1 AC3 5 LYS A 62 GLU A 80 VAL A 178 ASP A 179 SITE 2 AC3 5 HOH A 504 SITE 1 AC4 1 THR A 214 SITE 1 AC5 15 ALA A 60 LYS A 62 GLU A 111 ALA A 113 SITE 2 AC5 15 GLU A 117 GLN A 162 ASN A 163 LEU A 165 SITE 3 AC5 15 ASP A 179 MG A 401 HOH A 504 HOH A 506 SITE 4 AC5 15 HOH A 534 HOH A 547 HOH A 574 CRYST1 85.479 85.479 118.073 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011699 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008469 0.00000